BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00010201
         (615 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
ref|XP_006385618.1| hypothetical protein POPTR_0003s08690g [Popu...   291   8e-77
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   290   2e-76
ref|XP_006451021.1| hypothetical protein CICLE_v10007671mg [Citr...   290   3e-76
ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containi...   289   5e-76
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   289   5e-76
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   288   7e-76
ref|XP_006351154.1| PREDICTED: pentatricopeptide repeat-containi...   288   9e-76
ref|XP_004250591.1| PREDICTED: pentatricopeptide repeat-containi...   284   2e-74
ref|XP_004288819.1| PREDICTED: pentatricopeptide repeat-containi...   283   2e-74
ref|XP_007013319.1| Pentatricopeptide repeat-containing protein,...   278   1e-72
ref|XP_004513004.1| PREDICTED: pentatricopeptide repeat-containi...   278   1e-72
ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containi...   277   2e-72
ref|XP_006583750.1| PREDICTED: pentatricopeptide repeat-containi...   275   8e-72
gb|EXB76274.1| hypothetical protein L484_025631 [Morus notabilis]     273   4e-71
ref|XP_007153195.1| hypothetical protein PHAVU_003G014900g [Phas...   271   1e-70
gb|ABD96949.1| hypothetical protein [Cleome spinosa]                  258   7e-67
gb|EYU35016.1| hypothetical protein MIMGU_mgv1a023947mg, partial...   258   1e-66
ref|XP_002891146.1| pentatricopeptide repeat-containing protein ...   246   3e-63
ref|XP_006304931.1| hypothetical protein CARUB_v10011411mg [Caps...   245   9e-63

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  300 bits (767), Expect = 3e-79
 Identities = 141/205 (68%), Positives = 178/205 (86%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           AE+G ++ +RQ+FEE   RDVV WN+LISGYV+C R++DAV VFR M++  S+RP+EA+V
Sbjct: 178 AEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATV 237

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC+AL  LE GKE+HRYV E+L FT  +GNAL+DMY KCG LS+A+ IF++MPIK
Sbjct: 238 VSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIK 297

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
            VI WTS+VSGYVN G+L+EARELFERSP +DV+LWT++INGYVQFNRFD+A+ALF+EMQ
Sbjct: 298 TVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQ 357

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           I+RV PD+FT+VALLTGCAQLG LE
Sbjct: 358 IKRVSPDRFTLVALLTGCAQLGTLE 382



 Score =  126 bits (316), Expect = 6e-27
 Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R+LFE +  RDVV W  +I+GYV+  RF DAV++FREM+    V PD  ++V+ 
Sbjct: 313 GQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQ-IKRVSPDRFTLVAL 371

Query: 190 LTACVALGDLEFGKELHRYVTE-ELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H Y+ E ++    V+G AL++MYAKCG +               
Sbjct: 372 LTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIE-------------- 417

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                            ++ E+F    EKD   WTS+I G     +  +AL LF EM   
Sbjct: 418 -----------------KSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQT 460

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
            VKPD  T + +L+ C+  G +E
Sbjct: 461 GVKPDDITFIGVLSACSHGGLVE 483



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 55/205 (26%), Positives = 107/205 (52%), Gaps = 2/205 (0%)
 Frame = +1

Query: 7   MGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVS 186
           +G L    ++F       +  +N++I  + + G F+ AV +FR++ E + + PD  +   
Sbjct: 79  IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLRE-EGLSPDNFTYPF 137

Query: 187 TLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKN 363
              A   LG++  G++++ +V +  LEF T + N+L+DMYA+ G +   +++F+EMP ++
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRD 197

Query: 364 VISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQI 543
           V+SW  ++SGY                               V+  R+++A+ +F+ MQ 
Sbjct: 198 VVSWNVLISGY-------------------------------VKCRRYEDAVDVFRRMQQ 226

Query: 544 R-RVKPDKFTVVALLTGCAQLGALE 615
           +  ++P++ TVV+ L+ C  L  LE
Sbjct: 227 QSSLRPNEATVVSTLSACIALKMLE 251



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E   ++F     +D   W  +I G    G+   A+ +F EM +   V+PD+ + 
Sbjct: 411 AKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQT-GVKPDDITF 469

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGN--ALLDMYAKCGCLSLAQRIFDEMP 354
           +  L+AC   G +E G++  R +T   +    L +   L+D+  + G L  A+ + ++ P
Sbjct: 470 IGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSP 529

Query: 355 IKNVISWTSIVSGYVNVGKLNEARELFERSPEK-------DVILWTSLINGYVQFNRFDE 513
             N      +    ++  + +   E+ ER  ++       D  + T L N Y   +R+++
Sbjct: 530 NVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWED 589

Query: 514 ALALFQEMQIRRVK 555
              + ++M+   VK
Sbjct: 590 VTKVRRKMKDLGVK 603


>ref|XP_006385618.1| hypothetical protein POPTR_0003s08690g [Populus trichocarpa]
           gi|550342748|gb|ERP63415.1| hypothetical protein
           POPTR_0003s08690g [Populus trichocarpa]
          Length = 609

 Score =  291 bits (746), Expect = 8e-77
 Identities = 140/205 (68%), Positives = 174/205 (84%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A++G ++ MR+LF+E   RDVV WN+LISGYV+  RF+DA+ VF  M E   +RP+E +V
Sbjct: 134 AKLGQVDVMRKLFDEMPERDVVSWNVLISGYVKRRRFEDAIDVFCCMREESYLRPNEPTV 193

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC AL  LE GKE+H YV + LE T+++G+ALLDMY KCGCLS+A++IFDEMP K
Sbjct: 194 VSTLSACAALKCLELGKEIHCYVRDRLELTSIIGSALLDMYCKCGCLSVARKIFDEMPHK 253

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NVI WTS+VSGYVN G+L++ARELFERSP KDV+LWT++INGYVQFN FDEA+ALFQEMQ
Sbjct: 254 NVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQ 313

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           I+RVKPDKF +VALLTGCAQ+GALE
Sbjct: 314 IQRVKPDKFVLVALLTGCAQMGALE 338



 Score =  119 bits (298), Expect = 7e-25
 Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R+LFE +  +DVV W  +I+GYV+   F +AV++F+EM+    V+PD+  +V+ 
Sbjct: 269 GELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVALFQEMQ-IQRVKPDKFVLVAL 327

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  +G LE G  +H Y+ E+ +    V+G +L++MY+KCGC+  A RIF  +  K+ 
Sbjct: 328 LTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDT 387

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            +WTSI+ G    GK ++A ELF +  + + I                            
Sbjct: 388 ATWTSIICGLAMNGKTSKALELFSKMKQVEAI---------------------------- 419

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
              PD+ T + +L+ C+  G +E
Sbjct: 420 ---PDEVTFIGVLSACSHGGLVE 439



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L    ++F    +  +  +NI+I  + + G F+  + +F ++ E D + PD  +    
Sbjct: 36  GNLVHAERIFNYIQNPGLFVYNIMIKAFAKKGIFRKCLMLFNKLRE-DGLWPDNFTYPFV 94

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           L A   LG++   ++LH +V +  LE  T + N L+DMYAK G + + +++FDEMP ++V
Sbjct: 95  LKAIGCLGEVLEAEKLHGFVMKTGLESDTYVCNPLIDMYAKLGQVDVMRKLFDEMPERDV 154

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
           +SW  ++SG                               YV+  RF++A+ +F  M+  
Sbjct: 155 VSWNVLISG-------------------------------YVKRRRFEDAIDVFCCMREE 183

Query: 547 R-VKPDKFTVVALLTGCAQLGALE 615
             ++P++ TVV+ L+ CA L  LE
Sbjct: 184 SYLRPNEPTVVSTLSACAALKCLE 207


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  290 bits (743), Expect = 2e-76
 Identities = 134/204 (65%), Positives = 174/204 (85%)
 Frame = +1

Query: 4   EMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVV 183
           E+  +E  ++LF+E T+RD V WN++ISGYVRC RF+DA++ FREM++  + +PDEA+VV
Sbjct: 290 ELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVV 349

Query: 184 STLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKN 363
           STL+AC AL +LE G E+H YV +EL FTT + NALLDMYAKCGCL++A+ IFDEM +KN
Sbjct: 350 STLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKN 409

Query: 364 VISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQI 543
           VI WTS++SGY+N G L EAR+LF++SP +DV+LWT++INGYVQF+ FD+A+ALF+EMQI
Sbjct: 410 VICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQI 469

Query: 544 RRVKPDKFTVVALLTGCAQLGALE 615
           +RVKPDKFTVV LLTGCAQLGALE
Sbjct: 470 QRVKPDKFTVVTLLTGCAQLGALE 493



 Score =  125 bits (314), Expect = 1e-26
 Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L   R LF+++  RDVV W  +I+GYV+   F DAV++FREM+    V+PD+ +VV+ 
Sbjct: 424 GDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ-IQRVKPDKFTVVTL 482

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H Y+ E  +    V+G AL++MY+KCGC+               
Sbjct: 483 LTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCV--------------- 527

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                           +++ E+F    +KD   WTS+I G     +  EAL LF EM+  
Sbjct: 528 ----------------DKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERV 571

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
             KPD  T + +L+ C+  G +E
Sbjct: 572 GAKPDDITFIGVLSACSHGGLVE 594



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           + +G L    ++F       +  +N+++  Y + G  +  + +F+++ E D + PD  + 
Sbjct: 188 SSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLRE-DGLWPDGFTY 246

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
              L A   L D+  G+++  ++ +  ++    + N+L+DMY +   +  A+++FDEM  
Sbjct: 247 PFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTT 306

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++ +SW  ++SG                               YV+  RF++A+  F+EM
Sbjct: 307 RDSVSWNVMISG-------------------------------YVRCRRFEDAINTFREM 335

Query: 538 QIR-RVKPDKFTVVALLTGCAQLGALE 615
           Q     KPD+ TVV+ L+ C  L  LE
Sbjct: 336 QQEGNEKPDEATVVSTLSACTALKNLE 362



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
 Frame = +1

Query: 1    AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
            ++ G ++   ++F E   +D   W  +I G    G+  +A+ +F EME   + +PD+ + 
Sbjct: 522  SKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGA-KPDDITF 580

Query: 181  VSTLTACVALGDLEFGKELHRYV--TEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMP 354
            +  L+AC   G +E G+     +     +E        ++D+  + G L  A+ +  E+P
Sbjct: 581  IGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIP 640

Query: 355  IKNVISWTSIVSGYVNVGKLNEARELFERSPEK-------DVILWTSLINGYVQFNRFDE 513
            I+N      +    ++  +++   ++ ER  +K       D  + T L N Y   +R+++
Sbjct: 641  IENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWED 700

Query: 514  ALALFQEMQIRRVK 555
            A  + ++M+   VK
Sbjct: 701  AKKVRRKMKELGVK 714


>ref|XP_006451021.1| hypothetical protein CICLE_v10007671mg [Citrus clementina]
           gi|557554247|gb|ESR64261.1| hypothetical protein
           CICLE_v10007671mg [Citrus clementina]
          Length = 663

 Score =  290 bits (741), Expect = 3e-76
 Identities = 135/205 (65%), Positives = 173/205 (84%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A +G +  +++LF+E   +DVV WN+ ISG+V+C RF+DAV VFR M +  ++ PDE +V
Sbjct: 178 AVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTV 237

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC AL +LE GKE+HRY+ +ELEFT ++GNALLDMY KCGCLS A+ +FDEMP K
Sbjct: 238 VSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNK 297

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NVI WTS+VSGYVN G+L +AR+LF+RSP +D++LWT++INGYVQFNRFDEA+ALF+EMQ
Sbjct: 298 NVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQ 357

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           I R+KPDKF +VALLTGCAQLGALE
Sbjct: 358 IIRLKPDKFILVALLTGCAQLGALE 382



 Score =  124 bits (312), Expect = 2e-26
 Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 6/189 (3%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G LE  R LF+ +  RD+V W  +I+GYV+  RF +AV++FREM+    ++PD+  +V+ 
Sbjct: 313 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVAL 371

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H Y+ E  +    V+  AL++MYAKCG +  A  IF E+  K+ 
Sbjct: 372 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 431

Query: 367 ISWTSIVSGYVNVGKLNEARELFER----SPEKDVILWTSLINGYVQFNRFDEALALFQE 534
            SWTSI+ G    GK+N+A ELF +      + D I +  +++        DE    F  
Sbjct: 432 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 491

Query: 535 M-QIRRVKP 558
           M ++ +++P
Sbjct: 492 MTEVYQIQP 500



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
 Frame = +1

Query: 31  QLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVAL 210
           ++F    S  ++ +N+LI  + + G F+ ++ +F ++ E   V PD  +      A   L
Sbjct: 87  KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGCL 145

Query: 211 GDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIV 387
           G+++ G+++H YV +  LEF T + N+++DMYA  G +   +++FDEMP K+V+SW   +
Sbjct: 146 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYAVLGKICNVKKLFDEMPDKDVVSWNVSI 205

Query: 388 SGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM-QIRRVKPDK 564
           SG                               +V+  RF++A+ +F+ M Q   + PD+
Sbjct: 206 SG-------------------------------HVKCMRFEDAVDVFRRMRQGCNLMPDE 234

Query: 565 FTVVALLTGCAQLGALE 615
            TVV+ L+ C  L  LE
Sbjct: 235 GTVVSTLSACTALKNLE 251


>ref|XP_006475772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Citrus sinensis]
          Length = 663

 Score =  289 bits (739), Expect = 5e-76
 Identities = 134/203 (66%), Positives = 172/203 (84%)
 Frame = +1

Query: 7   MGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVS 186
           +G +  +++LF+E   +DVV WN+ ISG+V+C RF+DAV VFR M +  ++ PDE +VVS
Sbjct: 180 LGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEGTVVS 239

Query: 187 TLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           TL+AC AL +LE GKE+HRY+ +ELEFT ++GNALLDMY KCGCLS A+ +FDEMP KNV
Sbjct: 240 TLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMPNKNV 299

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
           I WTS+VSGYVN G+L +AR+LF+RSP +D++LWT++INGYVQFNRFDEA+ALF+EMQI 
Sbjct: 300 ICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII 359

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
           R+KPDKF +VALLTGCAQLGALE
Sbjct: 360 RLKPDKFILVALLTGCAQLGALE 382



 Score =  124 bits (312), Expect = 2e-26
 Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 6/189 (3%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G LE  R LF+ +  RD+V W  +I+GYV+  RF +AV++FREM+    ++PD+  +V+ 
Sbjct: 313 GQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFREMQII-RLKPDKFILVAL 371

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H Y+ E  +    V+  AL++MYAKCG +  A  IF E+  K+ 
Sbjct: 372 LTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGLIEKALEIFYELREKDA 431

Query: 367 ISWTSIVSGYVNVGKLNEARELFER----SPEKDVILWTSLINGYVQFNRFDEALALFQE 534
            SWTSI+ G    GK+N+A ELF +      + D I +  +++        DE    F  
Sbjct: 432 ASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSACSHGGLVDEGRRFFNT 491

Query: 535 M-QIRRVKP 558
           M ++ +++P
Sbjct: 492 MTEVYQIQP 500



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
 Frame = +1

Query: 31  QLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVAL 210
           ++F    S  ++ +N+LI  + + G F+ ++ +F ++ E   V PD  +      A   L
Sbjct: 87  KIFGSIQSPCLLAYNLLIKAFAKKGSFRKSLLLFSKLRER-GVSPDNFTYPFVFKAVGWL 145

Query: 211 GDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIV 387
           G+++ G+++H YV +  LEF T + N+++DMY   G +   +++FDEMP K+V+SW   +
Sbjct: 146 GEVKKGEKVHGYVVKTGLEFDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSI 205

Query: 388 SGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM-QIRRVKPDK 564
           SG                               +V+  RF++A+ +F+ M Q   + PD+
Sbjct: 206 SG-------------------------------HVKCMRFEDAVDVFRRMRQGCNLMPDE 234

Query: 565 FTVVALLTGCAQLGALE 615
            TVV+ L+ C  L  LE
Sbjct: 235 GTVVSTLSACTALKNLE 251


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  289 bits (739), Expect = 5e-76
 Identities = 132/204 (64%), Positives = 174/204 (85%)
 Frame = +1

Query: 4   EMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVV 183
           E+  +E  ++LF+E T+RD V WN++ISGYVRC RF+DA++ FREM++  + +PDEA+VV
Sbjct: 244 ELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVV 303

Query: 184 STLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKN 363
           STL+AC AL +LE G E+H YV +EL FTT + NALLDMYAKCGCL++A+ IFDEM +KN
Sbjct: 304 STLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKN 363

Query: 364 VISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQI 543
           VI WTS++SGY+N G L EAR+LF++SP +DV+LWT++INGYVQF+ FD+A+ALF+EMQI
Sbjct: 364 VICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQI 423

Query: 544 RRVKPDKFTVVALLTGCAQLGALE 615
           +++KPDKFTVV LLTGCAQLGALE
Sbjct: 424 QKIKPDKFTVVTLLTGCAQLGALE 447



 Score =  125 bits (314), Expect = 1e-26
 Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L   R LF+++  RDVV W  +I+GYV+   F DAV++FREM+    ++PD+ +VV+ 
Sbjct: 378 GDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ-IQKIKPDKFTVVTL 436

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H Y+ E  +    V+G AL++MY+KCGC+               
Sbjct: 437 LTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCV--------------- 481

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                           +++ E+F    +KD   WTS+I G     +  EAL LF EM+  
Sbjct: 482 ----------------DKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERV 525

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
             KPD  T + +L+ C+  G +E
Sbjct: 526 GAKPDDITFIGVLSACSHGGLVE 548



 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           + +G L    ++F       +  +N+++  Y + G  +  + +F+++ E D + PD  + 
Sbjct: 142 SSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLRE-DGLWPDGFTY 200

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
              L A   L D+  G+++  ++ +  ++    + N+L+DMY +   +  A+++FDEM  
Sbjct: 201 PFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTT 260

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++ +SW  ++SG                               YV+  RF++A+  F+EM
Sbjct: 261 RDSVSWNVMISG-------------------------------YVRCRRFEDAINTFREM 289

Query: 538 QIR-RVKPDKFTVVALLTGCAQLGALE 615
           Q     KPD+ TVV+ L+ C  L  LE
Sbjct: 290 QQEGNEKPDEATVVSTLSACTALKNLE 316



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
 Frame = +1

Query: 1    AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
            ++ G ++   ++F E   +D   W  +I G    G+  +A+ +F EME   + +PD+ + 
Sbjct: 476  SKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGA-KPDDITF 534

Query: 181  VSTLTACVALGDLEFGKELHRYV--TEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMP 354
            +  L+AC   G +E G+     +     +E        ++D+  + G L  A+ +  E+P
Sbjct: 535  IGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIP 594

Query: 355  IKNVISWTSIVSGYVNVGKLNEARELFERSPEK-------DVILWTSLINGYVQFNRFDE 513
            I+N      +    ++  +++   ++ ER  +K       D  + T L N Y   +R+++
Sbjct: 595  IENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWED 654

Query: 514  ALALFQEMQIRRVK 555
            A  + ++M+   VK
Sbjct: 655  AKKVRRKMKELGVK 668


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  288 bits (738), Expect = 7e-76
 Identities = 131/205 (63%), Positives = 171/205 (83%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A++ L + M+ LF+E   RDV+ WN++ISGYV+C RF+DA++VF  M+E   + PDEA+V
Sbjct: 183 AQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATV 242

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC AL  LE GK++H YV + ++FT ++GNALLDMY KCGCLS+A+ +F+EMP K
Sbjct: 243 VSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSK 302

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NVI WT++VSGY N G+L EARELFE SP +DV++WT++INGYVQFNRFDEA+ALF+EMQ
Sbjct: 303 NVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQ 362

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           IR+VKPDKF VV+LLTGCAQ GA+E
Sbjct: 363 IRKVKPDKFIVVSLLTGCAQTGAIE 387



 Score =  127 bits (318), Expect = 3e-27
 Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 1/206 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A  G LE  R+LFE +  RDVV W  +I+GYV+  RF +AV++FREM+    V+PD+  V
Sbjct: 315 ANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQ-IRKVKPDKFIV 373

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
           VS LT C   G +E GK +H ++ E  +    V+G AL++MYAKCG +  A  IF  + +
Sbjct: 374 VSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRV 433

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           K+  SWTSI+ G    GK ++A ELF +                               M
Sbjct: 434 KDTASWTSIICGLAMNGKTSKALELFSK-------------------------------M 462

Query: 538 QIRRVKPDKFTVVALLTGCAQLGALE 615
           +   V+PD  T + +L+ C+  G +E
Sbjct: 463 KQAGVRPDDITFIGVLSACSHGGLVE 488



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L    ++F+      ++ +N++I  + + G +K  + +F ++ E D + PD  +    
Sbjct: 85  GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLRE-DGLWPDNFTYPFV 143

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
             A   LG++   ++L   VT+  LEF T + N+L+DMYA+     + + +FDEMP ++V
Sbjct: 144 FKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDV 203

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
           ISW  ++SGY                               V+  RF++A+ +F  MQ  
Sbjct: 204 ISWNVMISGY-------------------------------VKCRRFEDAINVFCRMQEE 232

Query: 547 R-VKPDKFTVVALLTGCAQLGALE 615
             + PD+ TVV+ L+ C  L  LE
Sbjct: 233 SGLMPDEATVVSTLSACTALKRLE 256


>ref|XP_006351154.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Solanum tuberosum]
          Length = 604

 Score =  288 bits (737), Expect = 9e-76
 Identities = 131/202 (64%), Positives = 172/202 (85%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G +E + ++F+E   RD V WNILISG+VRCGRF+DAV V+++M E +  RPDEA+VVST
Sbjct: 161 GYVESLNKVFDEMPQRDSVAWNILISGFVRCGRFRDAVVVYKKMREENGARPDEATVVST 220

Query: 190 LTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVI 369
           L+AC AL  LE G+E+H YV EELEF+ ++GNAL+DMY KCGCL +A+ IFD+MP+KNVI
Sbjct: 221 LSACAALKSLELGREIHGYVVEELEFSLIIGNALVDMYCKCGCLMVAREIFDDMPMKNVI 280

Query: 370 SWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIRR 549
            WTS+VSGYVN G+L+EAR+LFERSP +D++LWT++INGYVQFNR D+A+ LF+ MQ++ 
Sbjct: 281 CWTSMVSGYVNSGQLDEARKLFERSPVRDLVLWTTMINGYVQFNRVDDAMDLFRSMQMQG 340

Query: 550 VKPDKFTVVALLTGCAQLGALE 615
           +KPDK+T+VALLTGCAQLGAL+
Sbjct: 341 IKPDKYTLVALLTGCAQLGALQ 362



 Score =  123 bits (308), Expect = 5e-26
 Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R+LFE +  RD+V W  +I+GYV+  R  DA+ +FR M+    ++PD+ ++V+ 
Sbjct: 293 GQLDEARKLFERSPVRDLVLWTTMINGYVQFNRVDDAMDLFRSMQ-MQGIKPDKYTLVAL 351

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG L+ G+ +H Y+ E  +  T V+G AL++MYAKCGC+  +  IFDE+  K+ 
Sbjct: 352 LTGCAQLGALQQGEWIHDYMKENRITVTAVVGTALIEMYAKCGCIEKSMEIFDELEEKDT 411

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWTSI+      G                                  +AL LF EM+  
Sbjct: 412 ASWTSIICSLAMSGNTR-------------------------------KALELFSEMEQA 440

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
              PD  T + +L+ C+  G +E
Sbjct: 441 GFHPDDITYIGVLSACSHGGLVE 463



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
 Frame = +1

Query: 28  RQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVA 207
           +++F    +R +  +N++I GYV+ G+FK  + +F E+     + PD  +      A   
Sbjct: 66  KKIFSCCENRTLFMYNVMIKGYVKTGQFKKPLFLFDELR-IHGLFPDNFTYPFVFKAIGE 124

Query: 208 LGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSI 384
           L  ++ G+++H YV +  + F   +GN+++DMY   G +    ++FDEMP ++ ++W  +
Sbjct: 125 LKMVKGGEKIHGYVLKSGVLFDNYVGNSVMDMYGLFGYVESLNKVFDEMPQRDSVAWNIL 184

Query: 385 VSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIRRVKPDK 564
           +SG+V  G+  +A  ++++  E+         NG                      +PD+
Sbjct: 185 ISGFVRCGRFRDAVVVYKKMREE---------NG---------------------ARPDE 214

Query: 565 FTVVALLTGCAQLGALE 615
            TVV+ L+ CA L +LE
Sbjct: 215 ATVVSTLSACAALKSLE 231



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E   ++F+E   +D   W  +I      G  + A+ +F EME+A    PD+ + 
Sbjct: 391 AKCGCIEKSMEIFDELEEKDTASWTSIICSLAMSGNTRKALELFSEMEQA-GFHPDDITY 449

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGN--ALLDMYAKCGCLSLAQRIFDEMP 354
           +  L+AC   G +E G++    ++        L +   L+D+  + G LS A+ +  ++P
Sbjct: 450 IGVLSACSHGGLVEEGRKYFHAMSRIHAIQPKLEHYGCLIDLLGRAGLLSEAEVMISQIP 509

Query: 355 IKN----VISWTSIVSG---YVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDE 513
            ++    V  + +++S    Y NV       EL       D    T L N Y    R+++
Sbjct: 510 NRDNEIIVPIYGALLSACRIYGNVDVGERVAELLMEIESYDSSTHTLLANTYASAGRWED 569

Query: 514 ALALFQEMQIRRVK 555
            L +   M+   VK
Sbjct: 570 VLKVRGTMRDLGVK 583


>ref|XP_004250591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Solanum lycopersicum]
          Length = 600

 Score =  284 bits (726), Expect = 2e-74
 Identities = 130/202 (64%), Positives = 173/202 (85%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G +E + ++F+E  +RD V WNILISG+VRCGRF+DAV V+++M E ++V+PDEA+VVST
Sbjct: 157 GYVESLNKVFDEMPNRDSVAWNILISGFVRCGRFQDAVVVYKKMREENAVKPDEATVVST 216

Query: 190 LTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVI 369
           L+AC AL  LE G+E+H YV EELEF+ ++GNAL+DMY KCGCL +A+ IFD+MP+KNVI
Sbjct: 217 LSACTALKSLEIGREIHGYVVEELEFSLIIGNALVDMYCKCGCLIVAREIFDDMPMKNVI 276

Query: 370 SWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIRR 549
            WTS+V GYVN G+L+EAR+LFERSP +D++LWT++INGYVQFN  D+A+ LF+ MQI+ 
Sbjct: 277 CWTSMVLGYVNNGQLDEARKLFERSPVRDLVLWTTMINGYVQFNCVDDAMDLFRSMQIQG 336

Query: 550 VKPDKFTVVALLTGCAQLGALE 615
           +KPDK+T+VALLTGCAQLGAL+
Sbjct: 337 IKPDKYTLVALLTGCAQLGALQ 358



 Score =  120 bits (301), Expect = 3e-25
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R+LFE +  RD+V W  +I+GYV+     DA+ +FR M+    ++PD+ ++V+ 
Sbjct: 289 GQLDEARKLFERSPVRDLVLWTTMINGYVQFNCVDDAMDLFRSMQ-IQGIKPDKYTLVAL 347

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG L+ G+ +H Y+ E  +  T V+G AL++MYAKCGC+  ++ IFDE+  K+ 
Sbjct: 348 LTGCAQLGALQQGEWIHDYMKENRITVTAVVGTALIEMYAKCGCIEKSKEIFDELEEKDT 407

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWTSI+      G                                  +AL LF EM+  
Sbjct: 408 ASWTSIICALAMSGNTR-------------------------------KALELFSEMEQA 436

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
              PD  T + +L+ C+  G +E
Sbjct: 437 GFHPDDITYIGVLSACSHGGLVE 459



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
 Frame = +1

Query: 28  RQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVA 207
           +++F    +R +  +N++I GYV+ G+FK  + +F E++    + PD  +      A   
Sbjct: 62  KKIFSCCENRTLFMYNVMIKGYVKTGQFKKPLYLFNELK-IHGLFPDNFTYPFVFKAIGE 120

Query: 208 LGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSI 384
           L  ++ G+++H YV +  + F   +GN+++DMY   G +    ++FDEMP ++ ++W  +
Sbjct: 121 LKMVKGGEKIHGYVLKSGVLFDNYVGNSVMDMYGLFGYVESLNKVFDEMPNRDSVAWNIL 180

Query: 385 VSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM-QIRRVKPD 561
           +SG+V  G                               RF +A+ ++++M +   VKPD
Sbjct: 181 ISGFVRCG-------------------------------RFQDAVVVYKKMREENAVKPD 209

Query: 562 KFTVVALLTGCAQLGALE 615
           + TVV+ L+ C  L +LE
Sbjct: 210 EATVVSTLSACTALKSLE 227



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E  +++F+E   +D   W  +I      G  + A+ +F EME+A    PD+ + 
Sbjct: 387 AKCGCIEKSKEIFDELEEKDTASWTSIICALAMSGNTRKALELFSEMEQA-GFHPDDITY 445

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGN--ALLDMYAKCGCLSLAQRIFDEMP 354
           +  L+AC   G +E G++    ++        L +   L+D+  + G LS A+ +  ++P
Sbjct: 446 IGVLSACSHGGLVEEGRKYFHAMSRIHAIQPKLEHYGCLIDLLGRAGLLSEAEVMISQIP 505

Query: 355 IKN----VISWTSIVSG---YVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDE 513
            K+    V  + +++S    Y NV       EL       D    T L N Y    R+++
Sbjct: 506 NKDNKIIVPIYGALLSACRIYGNVDVGERVAELLMEIESYDSSTHTLLANTYASSGRWED 565

Query: 514 A 516
           A
Sbjct: 566 A 566


>ref|XP_004288819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Fragaria vesca subsp. vesca]
          Length = 633

 Score =  283 bits (725), Expect = 2e-74
 Identities = 134/205 (65%), Positives = 169/205 (82%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           AE+G +     LF+    RDVV WN++ISG V C RF++AVSVFR M +  +V+PDEA+V
Sbjct: 150 AELGQVHNAMNLFDGIPERDVVSWNVMISGCVGCMRFREAVSVFRRMRKESNVKPDEATV 209

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC AL DLE GKE+H YV  ELEF+ ++GNA LDMYAKCGCLS A+++FDE+ ++
Sbjct: 210 VSTLSACAALKDLELGKEVHDYVRAELEFSAIIGNAALDMYAKCGCLSEARKVFDEIRVR 269

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV+ WTS+V GYVN G L+EARELF+RSP KDV+LWT+++NGYVQ+N+FDEA+ALFQEMQ
Sbjct: 270 NVMCWTSMVCGYVNCGMLDEARELFDRSPAKDVVLWTAMMNGYVQYNQFDEAVALFQEMQ 329

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
            R V+ DKFT+VALLTGCAQLGALE
Sbjct: 330 FRGVRVDKFTIVALLTGCAQLGALE 354



 Score =  119 bits (298), Expect = 7e-25
 Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G+L+  R+LF+ + ++DVV W  +++GYV+  +F +AV++F+EM+    VR D+ ++V+ 
Sbjct: 285 GMLDEARELFDRSPAKDVVLWTAMMNGYVQYNQFDEAVALFQEMQFR-GVRVDKFTIVAL 343

Query: 190 LTACVALGDLEFGKELHRYVTE-ELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H+Y+ E  ++   ++G AL++M+AKCGC                
Sbjct: 344 LTGCAQLGALEQGKWIHKYIDEIGIKIDAIVGTALIEMFAKCGC---------------- 387

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                          + ++ E+F    EKD   WTS+I          +AL LF +M+  
Sbjct: 388 ---------------IGKSLEIFNALNEKDAATWTSMICALAMNGMTSKALELFSKMKQV 432

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
           R+ PD  T + +L+ C+  G ++
Sbjct: 433 RINPDDITFIGVLSACSHGGLVD 455



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
 Frame = +1

Query: 31  QLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVAL 210
           ++F    S  +  +N++I    +  RFK  + +FR++ E D + PD  +      A   L
Sbjct: 59  KVFTHIQSPGLFIYNVMIKALAKRKRFKSVIELFRKLRE-DGLWPDSFTYPFACKAIGGL 117

Query: 211 GDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIV 387
           GD   G+++H +  +    F T + N+L+ MYA+ G +  A  +FD +P ++V+SW  ++
Sbjct: 118 GDAREGEKIHGFAVKNGFRFDTYVCNSLIYMYAELGQVHNAMNLFDGIPERDVVSWNVMI 177

Query: 388 SGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIRRVKPDKF 567
           SG V   +  EA  +F R  ++                                VKPD+ 
Sbjct: 178 SGCVGCMRFREAVSVFRRMRKES------------------------------NVKPDEA 207

Query: 568 TVVALLTGCAQLGALE 615
           TVV+ L+ CA L  LE
Sbjct: 208 TVVSTLSACAALKDLE 223


>ref|XP_007013319.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508783682|gb|EOY30938.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 626

 Score =  278 bits (710), Expect = 1e-72
 Identities = 131/203 (64%), Positives = 168/203 (82%)
 Frame = +1

Query: 4   EMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVV 183
           ++G +   +++F++   RDVV WN+LISG VRCG F+DAV+VF  M +   V+P+EA++V
Sbjct: 183 QLGRVVYSKKIFDKMPERDVVAWNVLISGLVRCGIFEDAVNVFGLMIKEGLVKPNEATIV 242

Query: 184 STLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKN 363
           STL+AC AL  LE G E+ RYV +ELE TT++GNALLDMY KCGCL +A ++FDEMPIKN
Sbjct: 243 STLSACTALRRLELGNEIDRYVRKELELTTIMGNALLDMYCKCGCLDIAIKVFDEMPIKN 302

Query: 364 VISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQI 543
           V  WTS+VSGYVN G L+EARELF+RSP +DV+LWT++INGYVQFNRFDE++ LF+EMQI
Sbjct: 303 VNCWTSMVSGYVNCGLLDEARELFDRSPVRDVVLWTAMINGYVQFNRFDESMELFKEMQI 362

Query: 544 RRVKPDKFTVVALLTGCAQLGAL 612
           +RVKPD F VV+LLTGCAQ+GAL
Sbjct: 363 QRVKPDNFVVVSLLTGCAQMGAL 385



 Score =  122 bits (305), Expect = 1e-25
 Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           GLL+  R+LF+ +  RDVV W  +I+GYV+  RF +++ +F+EM+    V+PD   VVS 
Sbjct: 317 GLLDEARELFDRSPVRDVVLWTAMINGYVQFNRFDESMELFKEMQ-IQRVKPDNFVVVSL 375

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  +G L  GK +H Y+ E  +   T++G AL++MYAKCGC+  A  IF  +  K+ 
Sbjct: 376 LTGCAQMGALGQGKWIHAYLNENRIVVDTIVGTALIEMYAKCGCVEEALEIFYGLSKKDT 435

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWTS++ G                            +NG        +AL LF +M+  
Sbjct: 436 ASWTSVICGLA--------------------------VNG-----EASKALELFSQMKQT 464

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
             KPD  T + +L+ C   G +E
Sbjct: 465 EEKPDDITFIGVLSACNHGGLVE 487



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           + +G      ++F    +  +  +N++I  +V+ G +K+A+ VF ++ E   + PD  + 
Sbjct: 81  SSIGNFRYAEKVFSLIRNPSLFIYNVMIKTFVKKGSYKNAILVFGKLRE-QGLWPDNFTY 139

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
                A  +LG++  G+++H  V +  LEF   + N+L+DMY + G +  +++IFD+MP 
Sbjct: 140 PFVFKAIGSLGEVFEGEKIHGVVAKSGLEFDAYVINSLMDMYVQLGRVVYSKKIFDKMPE 199

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++V++W  ++SG V  G   +A  +F    ++ +                          
Sbjct: 200 RDVVAWNVLISGLVRCGIFEDAVNVFGLMIKEGL-------------------------- 233

Query: 538 QIRRVKPDKFTVVALLTGCAQLGALE 615
               VKP++ T+V+ L+ C  L  LE
Sbjct: 234 ----VKPNEATIVSTLSACTALRRLE 255



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E   ++F   + +D   W  +I G    G    A+ +F +M++ +  +PD+ + 
Sbjct: 415 AKCGCVEEALEIFYGLSKKDTASWTSVICGLAVNGEASKALELFSQMKQTEE-KPDDITF 473

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGN--ALLDMYAKCGCLSLAQRIFDEMP 354
           +  L+AC   G +E G++    +++  +    L +   L+D+  + G L+  +++ D++P
Sbjct: 474 IGVLSACNHGGLVEEGRQFFDSMSKVYQIEPKLEHYACLIDLLGRAGRLAEVEKLIDDIP 533

Query: 355 IKN----VISWTSIVSG---YVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDE 513
            ++    V  + S++S    YVNV       +        D  + T L N Y   +R+ +
Sbjct: 534 SQDNELVVPLYGSLLSACRTYVNVEMGEWVAQRLVEIKSSDSSIHTLLANIYASADRWGD 593

Query: 514 ALALFQEMQIRRVK 555
            + +  +M+   VK
Sbjct: 594 VIRVRAKMKDLGVK 607


>ref|XP_004513004.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like isoform X1 [Cicer arietinum]
          Length = 605

 Score =  278 bits (710), Expect = 1e-72
 Identities = 128/205 (62%), Positives = 169/205 (82%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           AE+G +  ++ +FEE   RD V WNI+ISG+VRC RF++AV VF++M   ++ +P EA+V
Sbjct: 144 AELGRVACLKHMFEEMPDRDNVSWNIMISGFVRCKRFREAVEVFQQMRMENNEKPSEATV 203

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTLTAC AL  +E GKE+H Y+  EL+FTT++GNALLDMY KCGC+S+A+ IFD M +K
Sbjct: 204 VSTLTACAALRHVELGKEIHSYIANELDFTTIMGNALLDMYCKCGCVSVAREIFDGMTVK 263

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV  WTS+V+GYVN G+L++AR+LF++SP +D++LWT++INGYVQFN FDEA+ALF EMQ
Sbjct: 264 NVNCWTSMVTGYVNCGQLDQARDLFDKSPTRDIVLWTAMINGYVQFNCFDEAIALFGEMQ 323

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           +R VKPDKF VV+LLT CAQLGALE
Sbjct: 324 VRGVKPDKFIVVSLLTCCAQLGALE 348



 Score =  125 bits (313), Expect = 1e-26
 Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R LF+++ +RD+V W  +I+GYV+   F +A+++F EM+    V+PD+  VVS 
Sbjct: 279 GQLDQARDLFDKSPTRDIVLWTAMINGYVQFNCFDEAIALFGEMQ-VRGVKPDKFIVVSL 337

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE G+ +H YV E  +    V+G +L++MYAKCGC+               
Sbjct: 338 LTCCAQLGALEHGRWIHDYVRENRITVDAVVGTSLIEMYAKCGCIE-------------- 383

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                            ++ E+F    EKD   WTS+I G     +  +AL LF+EM+  
Sbjct: 384 -----------------KSLEVFNGLKEKDTASWTSIICGLAMNGKTKKALELFEEMKTF 426

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
             KPD  T + LL+ C+  G +E
Sbjct: 427 GAKPDDVTFIVLLSACSHAGLVE 449



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
 Frame = +1

Query: 31  QLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVAL 210
           ++F  T    +  +N+LI  +V+ G F  A+S+F ++ E D + PD  +    L A   +
Sbjct: 53  RIFNHTQHPSLFIYNLLIKSFVKRGTFTAAISLFNQLRE-DGLWPDNYTYPYVLKAIGCM 111

Query: 211 GDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIV 387
           G++  G+++H +V +  L+F   + N+L+DMYA+ G ++  + +F+EMP ++ +SW  ++
Sbjct: 112 GEVGQGEKVHAFVIKTGLDFDNYVCNSLMDMYAELGRVACLKHMFEEMPDRDNVSWNIMI 171

Query: 388 SGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQI-RRVKPDK 564
           SG+V                               +  RF EA+ +FQ+M++    KP +
Sbjct: 172 SGFV-------------------------------RCKRFREAVEVFQQMRMENNEKPSE 200

Query: 565 FTVVALLTGCAQLGALE 615
            TVV+ LT CA L  +E
Sbjct: 201 ATVVSTLTACAALRHVE 217


>ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Glycine max]
          Length = 591

 Score =  277 bits (708), Expect = 2e-72
 Identities = 130/205 (63%), Positives = 166/205 (80%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           AE+GL+E   Q+FEE   RD V WNI+ISGYVRC RF++AV V+R M+   + +P+EA+V
Sbjct: 154 AELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATV 213

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC  L +LE GKE+H Y+  EL+ T ++GNALLDMY KCGC+S+A+ IFD M +K
Sbjct: 214 VSTLSACAVLRNLELGKEIHDYIANELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVK 273

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV  WTS+V+GYV  G+L++AR LFERSP +DV+LWT++INGYVQFN F++A+ALF EMQ
Sbjct: 274 NVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQ 333

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           IR V+PDKF VV LLTGCAQLGALE
Sbjct: 334 IRGVEPDKFIVVTLLTGCAQLGALE 358



 Score =  128 bits (321), Expect = 2e-27
 Identities = 74/203 (36%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R LFE + SRDVV W  +I+GYV+   F+DA+++F EM+    V PD+  VV+ 
Sbjct: 289 GQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQ-IRGVEPDKFIVVTL 347

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE GK +H Y+ E  ++   V+  AL++MYAKCGC+               
Sbjct: 348 LTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIE-------------- 393

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                            ++ E+F    + D   WTS+I G     +  EAL LF+ MQ  
Sbjct: 394 -----------------KSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTC 436

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
            +KPD  T VA+L+ C   G +E
Sbjct: 437 GLKPDDITFVAVLSACGHAGLVE 459



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           + +G      ++F       +  +N++I  +V+ G  + A+S+F+++ E   V PD  + 
Sbjct: 53  SSLGDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRER-GVWPDNYTY 111

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
              L     +G++  G+++H +V +  LEF   + N+L+DMYA+ G +    ++F+EMP 
Sbjct: 112 PYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPE 171

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++ +SW  ++SGY                               V+  RF+EA+ +++ M
Sbjct: 172 RDAVSWNIMISGY-------------------------------VRCKRFEEAVDVYRRM 200

Query: 538 QIR-RVKPDKFTVVALLTGCAQLGALE 615
           Q+    KP++ TVV+ L+ CA L  LE
Sbjct: 201 QMESNEKPNEATVVSTLSACAVLRNLE 227


>ref|XP_006583750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like isoform X1 [Glycine max]
          Length = 621

 Score =  275 bits (703), Expect = 8e-72
 Identities = 130/205 (63%), Positives = 164/205 (80%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           AE+GL+E   Q+FEE   RD V WNI+ISGYVRC RF++AV V+R M    + +P+EA+V
Sbjct: 161 AELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATV 220

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC  L +LE GKE+H Y+  EL+ TT++GNALLDMY KCG +S+A+ IFD M +K
Sbjct: 221 VSTLSACAVLRNLELGKEIHDYIASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVK 280

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV  WTS+V+GYV  G+L++AR LFERSP +D++LWT++INGYVQFNRF+E +ALF EMQ
Sbjct: 281 NVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQ 340

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           IR VKPDKF VV LLTGCAQ GALE
Sbjct: 341 IRGVKPDKFIVVTLLTGCAQSGALE 365



 Score =  129 bits (325), Expect = 5e-28
 Identities = 74/203 (36%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R LFE + SRD+V W  +I+GYV+  RF++ +++F EM+    V+PD+  VV+ 
Sbjct: 296 GQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQ-IRGVKPDKFIVVTL 354

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C   G LE GK +H Y+ E  ++   V+G AL++MYAKCGC                
Sbjct: 355 LTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGC---------------- 398

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
                          + ++ E+F    EKD   WTS+I G     +  EAL LF+ MQ  
Sbjct: 399 ---------------IEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTC 443

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
            +KPD  T VA+L+ C+  G +E
Sbjct: 444 GLKPDDITFVAVLSACSHAGLVE 466



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           + +G      ++F       +  +N++I  +V+ G F+ A+S+F+++ E   V PD  + 
Sbjct: 60  SSLGDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLRE-HGVWPDNYTY 118

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
              L     +G++  G+++H +V +  LEF   + N+ +DMYA+ G +    ++F+EMP 
Sbjct: 119 PYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPD 178

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++ +SW  ++SGYV   +  EA +++ R       +WT                      
Sbjct: 179 RDAVSWNIMISGYVRCKRFEEAVDVYRR-------MWTE--------------------- 210

Query: 538 QIRRVKPDKFTVVALLTGCAQLGALE 615
                KP++ TVV+ L+ CA L  LE
Sbjct: 211 --SNEKPNEATVVSTLSACAVLRNLE 234


>gb|EXB76274.1| hypothetical protein L484_025631 [Morus notabilis]
          Length = 564

 Score =  273 bits (697), Expect = 4e-71
 Identities = 133/203 (65%), Positives = 164/203 (80%)
 Frame = +1

Query: 7   MGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVS 186
           +G+L  + +LFE+ + RD V WN+ IS +VR GRF DAVSVFR M    +V+PDE ++VS
Sbjct: 110 LGMLLYVEKLFEKMSERDSVSWNVTISAFVRWGRFSDAVSVFRRMRLESNVKPDEPTIVS 169

Query: 187 TLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           TL+AC AL DLE G+E+H YV  +L FT  + N LLDMYAKCG LS+A+ IFDEMP KNV
Sbjct: 170 TLSACRALKDLELGEEIHDYVRNKLGFTDRINNVLLDMYAKCGWLSVAREIFDEMPTKNV 229

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
           I WTS+VSGYV  GKL+EA ELF+RSP +DV+LWT++INGYVQ+NRFD+A+ LFQEMQ +
Sbjct: 230 ICWTSMVSGYVKFGKLDEAIELFDRSPVRDVVLWTAMINGYVQYNRFDDAMDLFQEMQSK 289

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
           RVK DKFT+VALLTGCAQLGALE
Sbjct: 290 RVKADKFTMVALLTGCAQLGALE 312



 Score =  125 bits (314), Expect = 1e-26
 Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 1/205 (0%)
 Frame = +1

Query: 4   EMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVV 183
           + G L+   +LF+ +  RDVV W  +I+GYV+  RF DA+ +F+EM+ +  V+ D+ ++V
Sbjct: 241 KFGKLDEAIELFDRSPVRDVVLWTAMINGYVQYNRFDDAMDLFQEMQ-SKRVKADKFTMV 299

Query: 184 STLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           + LT C  LG LE G+ +H Y+ E  ++   V+G AL++MYAKCGC+             
Sbjct: 300 ALLTGCAQLGALEQGEWIHGYINENGIDIDAVVGTALIEMYAKCGCI------------- 346

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
                             +++ E+F+   EKD   WTS+I G     R  +AL LF EM+
Sbjct: 347 ------------------DKSLEIFKEVREKDTAAWTSIICGLAMNGRSSKALELFSEMR 388

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
              + PD  T + +L+ C+  G +E
Sbjct: 389 QAGINPDDITFIGVLSACSHAGLVE 413



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 2/205 (0%)
 Frame = +1

Query: 7   MGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVS 186
           +G L+   ++F       +  +N++I    + G F+ A+ VF  + E + + PD  +   
Sbjct: 9   LGNLQYAEKIFGFIQEPTLFVYNVMIKALTKKGSFRRAILVFERLRE-EGLWPDNFTYPF 67

Query: 187 TLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKN 363
            + A   LG+++ GK++H +V +  LEF T + N+L+DMY   G L   +++F++M  ++
Sbjct: 68  VMKAIGCLGEVQEGKKVHGFVVKTGLEFDTYVCNSLIDMYGHLGMLLYVEKLFEKMSERD 127

Query: 364 VISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQI 543
            +SW   +S +V  G                               RF +A+++F+ M++
Sbjct: 128 SVSWNVTISAFVRWG-------------------------------RFSDAVSVFRRMRL 156

Query: 544 R-RVKPDKFTVVALLTGCAQLGALE 615
              VKPD+ T+V+ L+ C  L  LE
Sbjct: 157 ESNVKPDEPTIVSTLSACRALKDLE 181



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G ++   ++F+E   +D   W  +I G    GR   A+ +F EM +A  + PD+ + 
Sbjct: 341 AKCGCIDKSLEIFKEVREKDTAAWTSIICGLAMNGRSSKALELFSEMRQA-GINPDDITF 399

Query: 181 VSTLTACVALGDLEFGKELHRYVTE--ELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMP 354
           +  L+AC   G +E G++    + E   +E        L+D++ + G L  A+ + + +P
Sbjct: 400 IGVLSACSHAGLVEEGRQFFHSMMEIYMIEPKYEHYGCLIDLFGRAGLLDEAEELIERIP 459

Query: 355 IKNVISWTSIVSGYVNVGKLNEARELFER 441
             +     S+    ++  +++   E+ ER
Sbjct: 460 NDSNTVLVSLYGALLSACRIHGNVEMGER 488


>ref|XP_007153195.1| hypothetical protein PHAVU_003G014900g [Phaseolus vulgaris]
           gi|561026549|gb|ESW25189.1| hypothetical protein
           PHAVU_003G014900g [Phaseolus vulgaris]
          Length = 595

 Score =  271 bits (693), Expect = 1e-70
 Identities = 127/205 (61%), Positives = 164/205 (80%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           AE+GL+E   Q+FEE   RD V WNI+ISGYVRC RF++AV V+  M +  + +P+EA+V
Sbjct: 148 AELGLVEGFTQVFEEMPERDTVSWNIMISGYVRCKRFQEAVDVYNRMRKESNEKPNEATV 207

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VS+L+AC AL +LE GKE+H Y+  EL+FT ++GNALLDMY KCG +S+AQ IFD M +K
Sbjct: 208 VSSLSACTALRNLELGKEIHDYIVNELDFTIIMGNALLDMYCKCGHVSVAQEIFDAMRVK 267

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV  WTS+V+GYV  G L++AR+ FERSP +D++LWT++INGYVQFNRF+EA+ALF EMQ
Sbjct: 268 NVNCWTSMVTGYVACGWLDQARDYFERSPSRDIVLWTAMINGYVQFNRFEEAIALFGEMQ 327

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           +R V+PD F VV LLTGCAQ GALE
Sbjct: 328 MRGVRPDNFIVVTLLTGCAQSGALE 352



 Score =  134 bits (338), Expect = 2e-29
 Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G L+  R  FE + SRD+V W  +I+GYV+  RF++A+++F EM+    VRPD   VV+ 
Sbjct: 283 GWLDQARDYFERSPSRDIVLWTAMINGYVQFNRFEEAIALFGEMQMR-GVRPDNFIVVTL 341

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C   G LE GK +H Y+ E  +    V+G AL++MYAKCGC+ +A  IFD +  K+ 
Sbjct: 342 LTGCAQSGALEQGKWIHNYIDENRILVDAVVGTALIEMYAKCGCIDIALEIFDALKEKDT 401

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWT+I+ G    GK ++A ELFE                                MQ+ 
Sbjct: 402 ASWTAIICGLAMNGKTSKALELFE-------------------------------AMQVC 430

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
             KPD  T +A+L+ C   G +E
Sbjct: 431 GFKPDDVTFIAVLSACTHAGLVE 453



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           + +G      ++F+   +  +  +N++I  +V+ G F+ A+S+F ++ E   V PD  + 
Sbjct: 47  SSLGDFNYANRIFKHIHNPSLFIYNLMIKAFVKRGSFRTAISLFHQLRE-HGVWPDNYTY 105

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
              L     +G+++ G+++H +V    LEF   +GN+L+DMYA+ G +    ++F+EMP 
Sbjct: 106 PYVLKGIGCIGEVKEGQKVHAFVVRTGLEFDAYVGNSLMDMYAELGLVEGFTQVFEEMPE 165

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++ +SW  ++SGYV   +  EA +++ R  ++                            
Sbjct: 166 RDTVSWNIMISGYVRCKRFQEAVDVYNRMRKES--------------------------- 198

Query: 538 QIRRVKPDKFTVVALLTGCAQLGALE 615
                KP++ TVV+ L+ C  L  LE
Sbjct: 199 ---NEKPNEATVVSSLSACTALRNLE 221


>gb|ABD96949.1| hypothetical protein [Cleome spinosa]
          Length = 639

 Score =  258 bits (660), Expect = 7e-67
 Identities = 123/203 (60%), Positives = 159/203 (78%)
 Frame = +1

Query: 7   MGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVS 186
           +G +E  +++F+E   RDVV WN+LIS YV   +F+DA++VFR M    +++ DEA+VVS
Sbjct: 162 LGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVS 221

Query: 187 TLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           TL+AC  L + E G+E+HRYV  ELE TT +GNALLDMY KCGC+  A+ IFDEM  KNV
Sbjct: 222 TLSACSVLRNQEVGEEIHRYVDAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNV 281

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
           I WTS+VSGY + G L+EARELFERSP +D++LWT++INGYVQFN FDEAL LF++MQI+
Sbjct: 282 ICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQ 341

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
           R++PD F +V LL GCAQ GALE
Sbjct: 342 RLRPDNFILVTLLKGCAQTGALE 364



 Score =  116 bits (290), Expect = 6e-24
 Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A  G L+  R+LFE +  RD+V W  +I+GYV+   F +A+ +FR+M+    +RPD   +
Sbjct: 292 ASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQ-IQRLRPDNFIL 350

Query: 181 VSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPI 357
           V+ L  C   G LE GK LH Y+ E  +    V+G AL+D+YAKCGC+  A  +F EM  
Sbjct: 351 VTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKE 410

Query: 358 KNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM 537
           ++  SWTS++ G                            +NG        +AL  F +M
Sbjct: 411 RDTASWTSVIYGLA--------------------------VNGMT-----SKALDFFSQM 439

Query: 538 QIRRVKPDKFTVVALLTGCAQLGALE 615
           +    +PD  T + +LT C   G +E
Sbjct: 440 EEAGFRPDDITFIGVLTACNHGGLVE 465



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
 Frame = +1

Query: 61  VVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVALGDLEFGKELH 240
           +V +N++I    +   F+  + +F E+ +   + PD  ++     A   LG +  G+++H
Sbjct: 81  LVMYNLMIKAVAKDENFRKVLVLFSELRK-QGLNPDNFTLPPVFKAMGCLGKVVEGEKVH 139

Query: 241 RYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIVSGYVNVGKLNE 420
            YV +   F   + N+++ MY                                 +GK+  
Sbjct: 140 GYVVKS-GFDACVCNSVMGMYGA-------------------------------LGKMEV 167

Query: 421 ARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR-RVKPDKFTVVALLTGCA 597
           A+++F+  PE+DV+ W  LI+ YV   +F++A+A+F+ M+    +K D+ TVV+ L+ C+
Sbjct: 168 AKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACS 227

Query: 598 QL 603
            L
Sbjct: 228 VL 229



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E   ++F E   RD   W  +I G    G    A+  F +MEEA   RPD+ + 
Sbjct: 393 AKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEA-GFRPDDITF 451

Query: 181 VSTLTACVALGDLEFGKELHRYVTE--ELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMP 354
           +  LTAC   G +E G+     +T+  +++  +   + L+D+  + G L  A+ + + +P
Sbjct: 452 IGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIP 511

Query: 355 IKN----VISWTSIVSGYVNVGKLNEAREL---FERSPEKDVILWTSLINGYVQFNRFDE 513
           I++    V  + S++S   N G L  +  +    ER   KD  + T L + Y   NR+++
Sbjct: 512 IESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRWED 571

Query: 514 ALALFQEMQ 540
              + ++M+
Sbjct: 572 VTTVRRKMK 580


>gb|EYU35016.1| hypothetical protein MIMGU_mgv1a023947mg, partial [Mimulus
           guttatus]
          Length = 567

 Score =  258 bits (658), Expect = 1e-66
 Identities = 120/203 (59%), Positives = 160/203 (78%)
 Frame = +1

Query: 7   MGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVS 186
           +G +E + ++F+E   R+ + W +LISG+++  RF+DA+ V+R M    +V+PDEA+VVS
Sbjct: 130 LGCVESLSKVFDEMPERESISWTLLISGFLKSKRFEDAIGVYRRMRREANVQPDEATVVS 189

Query: 187 TLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           TL+AC AL  L+ G+E+H YV  +L FT ++GNALLDMYAKCGCL +A+ IFD M  KNV
Sbjct: 190 TLSACTALKSLDLGREIHEYVNMQLGFTVIIGNALLDMYAKCGCLDIARGIFDAMQEKNV 249

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
           I WTS+VS YV  G L+EAR LFERSP +D++LWT++INGYVQFN+ DEAL LF+ MQ+ 
Sbjct: 250 ICWTSMVSAYVRSGLLDEARALFERSPARDLVLWTTMINGYVQFNKVDEALTLFRYMQMD 309

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
            VKPDK+T+V+LLTGCAQLGALE
Sbjct: 310 GVKPDKYTLVSLLTGCAQLGALE 332



 Score =  124 bits (311), Expect = 2e-26
 Identities = 70/203 (34%), Positives = 111/203 (54%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           GLL+  R LFE + +RD+V W  +I+GYV+  +  +A+++FR M+  D V+PD+ ++VS 
Sbjct: 263 GLLDEARALFERSPARDLVLWTTMINGYVQFNKVDEALTLFRYMQ-MDGVKPDKYTLVSL 321

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C  LG LE G+ +H Y+ E  +    V+G AL++MYAKCGC+  + RIF+++  K+ 
Sbjct: 322 LTGCAQLGALEQGEWIHSYLEENGIPVDAVVGTALIEMYAKCGCVDKSLRIFNQLKYKDT 381

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWTSI+ G             +ER                    ++    A+  EM   
Sbjct: 382 ASWTSIICG-----------SRYER--------------------KYIHGSAIVSEMTRA 410

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
            +KPD  T + +L+ C+  G +E
Sbjct: 411 GIKPDDITFIGVLSACSHGGLVE 433



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
 Frame = +1

Query: 31  QLFEETTSRDVVCWNILISGYVRC--GRFKDAVSVFREMEEADSVRPDEASVVSTLTACV 204
           ++F       +  +N++I  +     G    A+S+F EM     + PD  +      A  
Sbjct: 35  KIFARIDRPTLFIYNVMIKAHAISVSGNCSRALSLFDEMR-VRGLCPDNYTYPFVFKAVS 93

Query: 205 ALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTS 381
            L  +  G+++H +  +  +     + N++LDMY   GC+    ++FDEM          
Sbjct: 94  RLRVVLEGEKIHGFALKSGVLCDCYVCNSVLDMYGALGCVESLSKVFDEM---------- 143

Query: 382 IVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR-RVKP 558
                                PE++ I WT LI+G+++  RF++A+ +++ M+    V+P
Sbjct: 144 ---------------------PERESISWTLLISGFLKSKRFEDAIGVYRRMRREANVQP 182

Query: 559 DKFTVVALLTGCAQLGALE 615
           D+ TVV+ L+ C  L +L+
Sbjct: 183 DEATVVSTLSACTALKSLD 201


>ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336988|gb|EFH67405.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 554

 Score =  246 bits (629), Expect = 3e-63
 Identities = 119/205 (58%), Positives = 154/205 (75%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A +G +E   ++F+E   RDVV WN LIS YV  GRF+DA+SVF+ M    +++ DE ++
Sbjct: 76  AALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTI 135

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC  L +LE G+ ++RYV  E E +   GNAL+DM+ KCGCL  A+ IFD M  K
Sbjct: 136 VSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDK 195

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV  WTS+VSGYV+ G+ +EARELFERSP KDV+LWT+++NGYVQFNRFDEAL LF+ MQ
Sbjct: 196 NVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 255

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
             R++PD F +V+LLTGCAQ GALE
Sbjct: 256 TARIRPDNFVLVSLLTGCAQTGALE 280



 Score =  116 bits (291), Expect = 5e-24
 Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G  +  R+LFE +  +DVV W  +++GYV+  RF +A+ +FR M+ A  +RPD   +VS 
Sbjct: 211 GRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA-RIRPDNFVLVSL 269

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C   G LE GK +H Y+ E  +    V+G AL+DMYAKCGC+  A  +F EM  ++ 
Sbjct: 270 LTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDT 329

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWTS++ G                       L T+ ++G         AL L+ EM+  
Sbjct: 330 ASWTSLIYG-----------------------LATNGMSG--------RALDLYYEMENV 358

Query: 547 RVKPDKFTVVALLTGCAQLG 606
            V+ D  T VA+LT C+  G
Sbjct: 359 GVRLDDITFVAVLTACSHGG 378



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
 Frame = +1

Query: 109 FKDAVSVFREMEEADSVRPDEASVVSTLTACVALGDLEFGKELHRYVTEE-LEFTTVLGN 285
           F   +++F E+     + PD  ++   L +   L  +  G+++H Y  +  LE  + + N
Sbjct: 11  FTKVLALFGELR-GQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCN 69

Query: 286 ALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIVSGYVNVGKLNEARELFERSPEKDVIL 465
           +L+ MYA  G + +  ++FDEMP ++V+SW  ++S YV  G                   
Sbjct: 70  SLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHG------------------- 110

Query: 466 WTSLINGYVQFNRFDEALALFQEM-QIRRVKPDKFTVVALLTGCAQLGALE 615
                       RF++A+++FQ M +   +K D+ T+V+ L+ C+ L  LE
Sbjct: 111 ------------RFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLE 149



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E    +F E   RD   W  LI G    G    A+ ++ EME    VR D+ + 
Sbjct: 309 AKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENV-GVRLDDITF 367

Query: 181 VSTLTACVALGDLEFGKELHRYVTE--ELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMP 354
           V+ LTAC   G +  G+ +   +TE  +++  +   + L+D+  + G L  A+ + D+M 
Sbjct: 368 VAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMH 427

Query: 355 -------IKNVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDE 513
                  +    S  S    Y NV       E  E+    D    T L + Y   NR+++
Sbjct: 428 GERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWED 487

Query: 514 ALALFQEMQ 540
              + ++M+
Sbjct: 488 VTNVRRKMK 496


>ref|XP_006304931.1| hypothetical protein CARUB_v10011411mg [Capsella rubella]
           gi|482573642|gb|EOA37829.1| hypothetical protein
           CARUB_v10011411mg [Capsella rubella]
          Length = 570

 Score =  245 bits (625), Expect = 9e-63
 Identities = 116/205 (56%), Positives = 156/205 (76%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A +G +E   ++F+E   RDVV WN LIS YV  GRF+DA++VF+ M +  +++ DE ++
Sbjct: 92  AALGKIEITHKVFDEMPQRDVVSWNGLISSYVGHGRFEDAIAVFKRMSQESNLKADEGTI 151

Query: 181 VSTLTACVALGDLEFGKELHRYVTEELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIK 360
           VSTL+AC  L +LE G+ +H+YV  E E +  +GNAL+DM+ KCG L  A+ +FD M  K
Sbjct: 152 VSTLSACSVLKNLEIGERIHKYVVTEFEMSVKIGNALVDMFCKCGRLDKARAVFDSMRDK 211

Query: 361 NVISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQ 540
           NV  WTS+VSGYV+ G+++EARELFERSP KDV+LWT+++NGYVQFNRFDEAL LF+ MQ
Sbjct: 212 NVKCWTSMVSGYVSNGRIDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271

Query: 541 IRRVKPDKFTVVALLTGCAQLGALE 615
           I  ++PD F +V+LLTGCAQ GALE
Sbjct: 272 IEGIRPDNFVLVSLLTGCAQTGALE 296



 Score =  117 bits (294), Expect = 2e-24
 Identities = 73/203 (35%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
 Frame = +1

Query: 10  GLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVST 189
           G ++  R+LFE +  +DVV W  +++GYV+  RF +A+ +FR M+  + +RPD   +VS 
Sbjct: 227 GRIDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ-IEGIRPDNFVLVSL 285

Query: 190 LTACVALGDLEFGKELHRYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNV 366
           LT C   G LE GK +H Y+ E  +    V+G AL+DMYAKCGC+  A  IF EM  ++ 
Sbjct: 286 LTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALEIFYEMKERDT 345

Query: 367 ISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEMQIR 546
            SWTS++ G                            +NG         AL L+ EM+  
Sbjct: 346 TSWTSLIYGLA--------------------------MNG-----MSGRALDLYYEMEHI 374

Query: 547 RVKPDKFTVVALLTGCAQLGALE 615
            V+ D  T VA+LT C   G +E
Sbjct: 375 GVRLDDITFVAVLTACNHGGFVE 397



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
 Frame = +1

Query: 61  VVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASVVSTLTACVALGDLEFGKELH 240
           +V +N ++        F   +++F E+     + PD  ++   L +   L  +  G+++H
Sbjct: 11  LVMYNKMLKSLADSKSFTKVLALFGELR-GQGLYPDSFTLPVVLKSIGRLRKVPEGEKVH 69

Query: 241 RYVTEE-LEFTTVLGNALLDMYAKCGCLSLAQRIFDEMPIKNVISWTSIVSGYVNVGKLN 417
            Y  +  LEF + + N+L+ MYA  G + +  ++FDEMP ++V+SW  ++S YV  G   
Sbjct: 70  GYAVKAGLEFDSYVSNSLMGMYAALGKIEITHKVFDEMPQRDVVSWNGLISSYVGHG--- 126

Query: 418 EARELFERSPEKDVILWTSLINGYVQFNRFDEALALFQEM-QIRRVKPDKFTVVALLTGC 594
                                       RF++A+A+F+ M Q   +K D+ T+V+ L+ C
Sbjct: 127 ----------------------------RFEDAIAVFKRMSQESNLKADEGTIVSTLSAC 158

Query: 595 AQLGALE 615
           + L  LE
Sbjct: 159 SVLKNLE 165



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
 Frame = +1

Query: 1   AEMGLLEPMRQLFEETTSRDVVCWNILISGYVRCGRFKDAVSVFREMEEADSVRPDEASV 180
           A+ G +E   ++F E   RD   W  LI G    G    A+ ++ EME    VR D+ + 
Sbjct: 325 AKCGCIETALEIFYEMKERDTTSWTSLIYGLAMNGMSGRALDLYYEMEHI-GVRLDDITF 383

Query: 181 VSTLTACVALGDLEFGKELHRYVTE--ELEFTTVLGNALLDMYAKCGCLSLAQRIFDEMP 354
           V+ LTAC   G +E G+ +   + +  +++  +   + L+D+  + G L  A+ + D+M 
Sbjct: 384 VAVLTACNHGGFVEEGRRIFYSMPKVHKIQPKSEHCSCLIDLLCRAGSLHEAEDLIDKMR 443

Query: 355 IKN-------VISWTSIVSGYVNVGKLNEARELFERSPEKDVILWTSLINGYVQFNRFDE 513
            +N         S  S    Y NV       E  E+    D    T L + Y   NR+++
Sbjct: 444 SENDETLVPVYCSLLSAARNYGNVKIAERVEEKLEKVEVSDSSAHTLLASVYASANRWED 503

Query: 514 ALALFQEMQ 540
              + ++M+
Sbjct: 504 VTNVRRKMK 512