BLASTX nr result
ID: Cocculus22_contig00010099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00010099
(792 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun... 68 9e-40
emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera] 64 6e-35
ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [The... 63 5e-34
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 61 6e-34
emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera] 64 8e-34
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] 62 1e-33
gb|AAC69377.1| putative retroelement pol polyprotein [Arabidopsi... 70 3e-33
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 69 3e-33
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc... 61 5e-33
ref|XP_007050046.1| DNA/RNA polymerases superfamily protein [The... 59 7e-33
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 64 9e-33
gb|AAC26240.1| contains similarity to reverse transcriptases (PF... 69 1e-32
emb|CAH66013.1| OSIGBa0093M15.3 [Oryza sativa Indica Group] 60 1e-32
emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group] 61 1e-32
ref|XP_007032220.1| Retrotransposon protein, putative [Theobroma... 59 1e-32
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc... 60 1e-32
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 61 2e-32
emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group] 61 2e-32
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc... 61 2e-32
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 61 3e-32
>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
gi|462395665|gb|EMJ01464.1| hypothetical protein
PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 67.8 bits (164), Expect(5) = 9e-40
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
E ++ DHKSLKYFF+Q+ELNMR RRWLE +KDYD T+EY GR
Sbjct: 919 ETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDYDCTIEYYPGR 963
Score = 65.5 bits (158), Expect(5) = 9e-40
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -1
Query: 705 PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTKLGCV 532
PLT+LT+KD++F W +CE +F E+KK LTT P+L L + VIY+D S LGCV
Sbjct: 816 PLTRLTRKDIAFEWTEECEQSFQELKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCV 873
Score = 56.2 bits (134), Expect(5) = 9e-40
Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHE-DRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + DRVIAYASRQ K H +NYP HDLEL AVVFALK
Sbjct: 872 CVLMQHDRVIAYASRQLKKHEQNYPVHDLELAAVVFALK 910
Score = 40.0 bits (92), Expect(5) = 9e-40
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLAS 705
T+VTE+R+F GLAGYYRR VE FS +A+
Sbjct: 788 TSVTEIRSFL-GLAGYYRRFVEGFSSIAA 815
Score = 21.9 bits (45), Expect(5) = 9e-40
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 294 GKANVVTCALSRK 256
G+ANVV ALSRK
Sbjct: 962 GRANVVADALSRK 974
>emb|CAN80324.1| hypothetical protein VITISV_015014 [Vitis vinifera]
Length = 596
Score = 63.5 bits (153), Expect(4) = 6e-35
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
E ++ DHKSLKY FSQKELNMR RRW+E LKDYD ++Y G+
Sbjct: 223 ETCEIFTDHKSLKYLFSQKELNMRQRRWIELLKDYDCIIQYHPGK 267
Score = 61.6 bits (148), Expect(4) = 6e-35
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + PLTKLTQK V F W++DCE +F E+K L + PIL + V+Y+D S
Sbjct: 114 FYKIALPLTKLTQKGVKFEWSDDCECSFQELKNKLVSAPILTIPSGSGGFVVYSDASHQG 173
Query: 543 LGCV 532
LGCV
Sbjct: 174 LGCV 177
Score = 51.2 bits (121), Expect(4) = 6e-35
Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHED-RVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + RV+AYASRQ K + +NYP HDLEL AVVFALK
Sbjct: 176 CVLMQHGRVVAYASRQLKPYEKNYPTHDLELAAVVFALK 214
Score = 38.9 bits (89), Expect(4) = 6e-35
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLA 708
+TVTE+R+F GLAGYYRR +E F K+A
Sbjct: 92 STVTEIRSFL-GLAGYYRRFIEGFYKIA 118
>ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508708185|gb|EOY00082.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1515
Score = 62.8 bits (151), Expect(4) = 5e-34
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
E ++ DHKSLKY +QKELN+R RRWLE +KDYD ++Y LG+
Sbjct: 933 EHCRIFTDHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHLGK 977
Score = 58.2 bits (139), Expect(4) = 5e-34
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1
Query: 705 PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTKLGCV 532
PLT+LT+K V FVW + CE+ F E+K LT+ P+L L + ++Y+D S LGCV
Sbjct: 830 PLTRLTRKGVKFVWDDVCENRFQELKNRLTSAPVLTLPVNGKGFIVYSDASKLGLGCV 887
Score = 53.9 bits (128), Expect(4) = 5e-34
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHED-RVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ +D +V+AYASRQ K H NYP HDLEL AVVFALK
Sbjct: 886 CVLMQDEKVVAYASRQLKRHEANYPTHDLELAAVVFALK 924
Score = 37.4 bits (85), Expect(4) = 5e-34
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -2
Query: 788 TVTEVRNFYAGLAGYYRRIVESFSKLAS 705
TVTE+R+F GLAGYYRR V+ FS +A+
Sbjct: 803 TVTEIRSFL-GLAGYYRRFVQGFSLVAA 829
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 60.8 bits (146), Expect(4) = 6e-34
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -1
Query: 702 LTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTKLGCV 532
LT+LT+ DV FVW+ +CE++F +K+ LTT PIL L E +Y D SG LGCV
Sbjct: 1086 LTRLTRVDVPFVWSEECEASFLRLKELLTTAPILTLPVEGEGFTVYCDASGVGLGCV 1142
Score = 56.6 bits (135), Expect(4) = 6e-34
Identities = 29/39 (74%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVI-HEDRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + RVIAYASRQ KIH NYP HDLEL AVVFALK
Sbjct: 1141 CVLMQQGRVIAYASRQLKIHEHNYPTHDLELAAVVFALK 1179
Score = 54.3 bits (129), Expect(4) = 6e-34
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = -2
Query: 410 LYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
+Y DH+SL+Y SQ++LN R RRW+E LKDYD ++ Y G+
Sbjct: 1192 IYTDHRSLQYIMSQRDLNSRQRRWIELLKDYDLSILYHPGK 1232
Score = 40.0 bits (92), Expect(4) = 6e-34
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLAS 705
T+VTE+R+F GLAGYYRR VE FS +A+
Sbjct: 1057 TSVTEIRSF-VGLAGYYRRFVEGFSTIAA 1084
>emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera]
Length = 855
Score = 64.3 bits (155), Expect(5) = 8e-34
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + PLT+LTQK V F W+NDCE +F E+KK L T PIL + V+Y+D S
Sbjct: 242 FSKIALPLTRLTQKGVKFEWSNDCERSFQELKKRLVTAPILTIPSXSGGFVVYSDASHQG 301
Query: 543 LGCV 532
GCV
Sbjct: 302 WGCV 305
Score = 60.8 bits (146), Expect(5) = 8e-34
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
E ++ DHKSLKY FSQKELNMR RW+E LKDYD ++Y G+
Sbjct: 351 ETYEIFTDHKSLKYLFSQKELNMRXGRWIELLKDYDCIIQYHPGK 395
Score = 46.6 bits (109), Expect(5) = 8e-34
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHED-RVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + +V+A AS+Q K + RNYP HDLEL AVVFALK
Sbjct: 304 CVLMQHXKVVACASKQLKPYERNYPTHDLELAAVVFALK 342
Score = 36.2 bits (82), Expect(5) = 8e-34
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -2
Query: 788 TVTEVRNFYAGLAGYYRRIVESFSKLA 708
TVTE+R+F GL YYRR +E FSK+A
Sbjct: 221 TVTEIRSFL-GLXXYYRRFIEGFSKIA 246
Score = 23.1 bits (48), Expect(5) = 8e-34
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1
Query: 294 GKANVVTCALSRK 256
GKANVV ALSRK
Sbjct: 394 GKANVVADALSRK 406
>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 61.6 bits (148), Expect(4) = 1e-33
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T L +K+ FVW++ C+++F E KK LTT P+L L +L + IY D S
Sbjct: 807 FSKLAKPMTALLEKNAKFVWSDKCQASFEEFKKRLTTAPVLVLPDLSKSFSIYCDASRLG 866
Query: 543 LGCV 532
LGCV
Sbjct: 867 LGCV 870
Score = 59.7 bits (143), Expect(4) = 1e-33
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I K +Y DHKSLKY F+Q +LN+R RRWLE +KDYD + Y G+
Sbjct: 914 IGHKSDIYTDHKSLKYIFTQTDLNLRQRRWLELIKDYDLEVHYHPGK 960
Score = 50.1 bits (118), Expect(4) = 1e-33
Identities = 26/39 (66%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVI-HEDRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ E RV+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 869 CVLMQEGRVVAYASRQLRKHELNYPTHDLELAAVVHALK 907
Score = 39.7 bits (91), Expect(4) = 1e-33
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLA 708
T V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 785 TDVSEIRSFL-GLAGYYRRFIEGFSKLA 811
>gb|AAC69377.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1328
Score = 70.1 bits (170), Expect(5) = 3e-33
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + P+TKLT KDV FVW+ +CE F +K+ LT+TP+L L E E ++YTD SG
Sbjct: 713 FASMAQPMTKLTGKDVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPYMVYTDASGVG 772
Query: 543 LGCV 532
LGCV
Sbjct: 773 LGCV 776
Score = 53.1 bits (126), Expect(5) = 3e-33
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -2
Query: 416 ITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
+ ++ DHKSLKY F+Q ELN+R R+W+E + DYD + Y G+
Sbjct: 824 VQVFTDHKSLKYIFTQPELNLRQRQWMELVADYDLEIAYHPGK 866
Score = 48.9 bits (115), Expect(5) = 3e-33
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHE-DRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + +VIAYASRQ + H NYP HDLE+ AV+FALK
Sbjct: 775 CVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALK 813
Score = 35.0 bits (79), Expect(5) = 3e-33
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLA 708
T TE+R+F GLAGYYRR V+ F+ +A
Sbjct: 691 TNATEIRSFL-GLAGYYRRFVKGFASMA 717
Score = 21.9 bits (45), Expect(5) = 3e-33
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 294 GKANVVTCALSRKGV 250
GKANVV ALS K V
Sbjct: 865 GKANVVADALSHKRV 879
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 68.6 bits (166), Expect(4) = 3e-33
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -1
Query: 759 GLSWLLQKNC*EFLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDE 580
GL+ +K +F + + PLT+LTQK++ F W+ +CE AF +K LT P+L L E+ +
Sbjct: 448 GLAGYYRKFVQDFSKIATPLTRLTQKNIKFEWSKECEEAFQTLKDKLTVAPVLALPEVFD 507
Query: 579 ELVIYTDVSGTKLGCV 532
+YTD SG LGCV
Sbjct: 508 NYDVYTDASGQGLGCV 523
Score = 62.8 bits (151), Expect(4) = 3e-33
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = -2
Query: 419 KITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
K ++ DHKSLK+FF+Q+ LNMR RRWLEF+KDYD ++Y G+
Sbjct: 570 KARIFTDHKSLKFFFTQENLNMRQRRWLEFVKDYDLDIQYHPGK 613
Score = 55.5 bits (132), Expect(4) = 3e-33
Identities = 27/40 (67%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = -3
Query: 535 CVIHE-DRVIAYASRQWKIH*RNYPAHDLELVAVVFALKR 419
CV+ + +VIAYASRQ K+H +NYP HDLEL AVVFALK+
Sbjct: 522 CVLMQAGKVIAYASRQLKVHEKNYPTHDLELAAVVFALKQ 561
Score = 22.7 bits (47), Expect(4) = 3e-33
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 294 GKANVVTCALSRKGV 250
GKANVV ALSR+ V
Sbjct: 612 GKANVVADALSRRPV 626
>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 60.8 bits (146), Expect(4) = 5e-33
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDYD + Y G+
Sbjct: 1235 IGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGK 1281
Score = 60.1 bits (144), Expect(4) = 5e-33
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F E+KK LTT P+L LL++ ++ I+ D S
Sbjct: 1128 FSKLARPMTELLKKEKKFQWSAACEDSFQELKKRLTTAPVLTLLDIQKDFEIFCDASRQG 1187
Query: 543 LGCV 532
LGCV
Sbjct: 1188 LGCV 1191
Score = 49.7 bits (117), Expect(4) = 5e-33
Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVI-HEDRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ E +V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 1190 CVLMQEQKVVAYASRQLRPHEANYPTHDLELAAVVHALK 1228
Score = 38.1 bits (87), Expect(4) = 5e-33
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 785 VTEVRNFYAGLAGYYRRIVESFSKLA 708
V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 1108 VSEIRSFL-GLAGYYRRFIEGFSKLA 1132
>ref|XP_007050046.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508702307|gb|EOX94203.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1336
Score = 59.3 bits (142), Expect(4) = 7e-33
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
E ++ DHKSLKY +QKE+N+R RRWLE +KDYD ++Y G+
Sbjct: 896 EHCQIFTDHKSLKYLLTQKEINLRQRRWLELIKDYDLVIDYHPGK 940
Score = 57.4 bits (137), Expect(4) = 7e-33
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = -1
Query: 705 PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTKLGCV 532
PLT+LT+K V FVW + CE+ F E+K LT P+L L + V+Y+D S LGCV
Sbjct: 793 PLTRLTRKGVKFVWDDVCENRFQELKNRLTFAPVLTLPVNGKGFVVYSDASKLGLGCV 850
Score = 53.9 bits (128), Expect(4) = 7e-33
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHED-RVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ +D +V+AYASRQ K H NYP HDLEL AVVFALK
Sbjct: 849 CVLMQDEKVVAYASRQLKRHEANYPTHDLELAAVVFALK 887
Score = 37.7 bits (86), Expect(4) = 7e-33
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -2
Query: 788 TVTEVRNFYAGLAGYYRRIVESFSKLAS 705
TVTE+R+F GLAGYYRR V+ FS +A+
Sbjct: 766 TVTEIRSFL-GLAGYYRRFVQGFSLIAA 792
>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 63.5 bits (153), Expect(4) = 9e-33
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
EK +Y DHKSLKY F+QK+LN R RRW+E L+DYDF L Y G+
Sbjct: 822 EKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGK 866
Score = 55.5 bits (132), Expect(4) = 9e-33
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVI-HEDRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ +D+V+AYASRQ K H RNYP HDLEL VVFALK
Sbjct: 775 CVLMQQDKVVAYASRQLKQHERNYPTHDLELAVVVFALK 813
Score = 52.4 bits (124), Expect(4) = 9e-33
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = -1
Query: 726 EFLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGT 547
+F + + P+T+LT+K V F +CE+AF E+K+ LT P+L E IY D S
Sbjct: 712 DFSRIAAPMTRLTRKGVKFDLNEECENAFQELKRKLTIAPVLTAPISGELFTIYCDASTV 771
Query: 546 KLGCV 532
LGCV
Sbjct: 772 GLGCV 776
Score = 36.6 bits (83), Expect(4) = 9e-33
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLAS 705
T V EVR+F GL GYYRR VE FS++A+
Sbjct: 691 TNVFEVRSFL-GLVGYYRRFVEDFSRIAA 718
>gb|AAC26240.1| contains similarity to reverse transcriptases (PFam: rvt.hmm,
score: 116.22) [Arabidopsis thaliana]
Length = 1322
Score = 68.9 bits (167), Expect(4) = 1e-32
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + P+TKLT KDV FVW+ +CE F +K+ LT+TP+L L E E +YTD SG
Sbjct: 770 FASMAQPMTKLTGKDVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGEPYSVYTDASGVG 829
Query: 543 LGCV 532
LGCV
Sbjct: 830 LGCV 833
Score = 56.6 bits (135), Expect(4) = 1e-32
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = -2
Query: 419 KITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
K+ ++ DHKSLKY F+Q ELN+R RRW+E + DYD + Y G+
Sbjct: 880 KVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLEIAYHPGK 923
Score = 48.9 bits (115), Expect(4) = 1e-32
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHE-DRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + +VIAYASRQ + H NYP HDLE+ AV+FALK
Sbjct: 832 CVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALK 870
Score = 33.1 bits (74), Expect(4) = 1e-32
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLA 708
T E+R+F GLAGYYRR V+ F+ +A
Sbjct: 748 TNAVEIRSFL-GLAGYYRRFVKGFASMA 774
>emb|CAH66013.1| OSIGBa0093M15.3 [Oryza sativa Indica Group]
Length = 1317
Score = 59.7 bits (143), Expect(4) = 1e-32
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L QK+V + W DCE +F E+KK L T P+L L + + +Y D S
Sbjct: 791 FSKIARPMTRLLQKEVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRHG 850
Query: 543 LGCV 532
LGCV
Sbjct: 851 LGCV 854
Score = 59.7 bits (143), Expect(4) = 1e-32
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -2
Query: 410 LYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
+Y DHKSLKY F+Q +LNMR RRWLE +KDYD + Y G+
Sbjct: 904 IYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMKIHYHPGK 944
Score = 50.1 bits (118), Expect(4) = 1e-32
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -3
Query: 553 RNKIRLCVIHEDRVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
R+ + ++ E +V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 848 RHGLGCVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALK 891
Score = 38.1 bits (87), Expect(4) = 1e-32
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2
Query: 788 TVTEVRNFYAGLAGYYRRIVESFSKLA 708
TV+E+R+F GL GYYRR +E+FSK+A
Sbjct: 770 TVSEIRSFL-GLVGYYRRFIENFSKIA 795
>emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group]
Length = 1851
Score = 60.8 bits (146), Expect(4) = 1e-32
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDYD + Y G+
Sbjct: 1279 IGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGK 1325
Score = 57.4 bits (137), Expect(4) = 1e-32
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F EMKK LTT P+L L ++ ++ I+ D S
Sbjct: 1172 FSKLARPMTELLKKEKKFQWSVACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQG 1231
Query: 543 LGCV 532
LGCV
Sbjct: 1232 LGCV 1235
Score = 48.9 bits (115), Expect(4) = 1e-32
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHEDR-VIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ ++R V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 1234 CVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALK 1272
Score = 40.0 bits (92), Expect(4) = 1e-32
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLA 708
T V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 1150 TNVSEIRSFL-GLAGYYRRFIEGFSKLA 1176
>ref|XP_007032220.1| Retrotransposon protein, putative [Theobroma cacao]
gi|508711249|gb|EOY03146.1| Retrotransposon protein,
putative [Theobroma cacao]
Length = 1480
Score = 58.5 bits (140), Expect(4) = 1e-32
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -1
Query: 702 LTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTKLGCV 532
LTKLT+KD F W++ CE++F ++K LTT P+L LL+ ++ D SG LGCV
Sbjct: 897 LTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLLQGTGGYTVFCDASGVGLGCV 953
Score = 58.5 bits (140), Expect(4) = 1e-32
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = -2
Query: 422 EKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
E +Y DHKSLKY F Q++LN+R RW+E LKDYD T+ Y G+
Sbjct: 999 ETCEIYTDHKSLKYIFQQRDLNLRQHRWMELLKDYDCTILYHPGK 1043
Score = 50.8 bits (120), Expect(4) = 1e-32
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHED-RVIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ + +VIAYASRQ K H +NYP HDLE+ A+VFALK
Sbjct: 952 CVLMQHGKVIAYASRQLKRHEQNYPIHDLEMAAIVFALK 990
Score = 39.3 bits (90), Expect(4) = 1e-32
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -2
Query: 791 TTVTEVRNFYAGLAGYYRRIVESFSKLAS 705
T+VTE+R+F GLAGYYRR V+ FSK+ +
Sbjct: 868 TSVTEIRSF-VGLAGYYRRFVKDFSKIVA 895
>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1122
Score = 59.7 bits (143), Expect(4) = 1e-32
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDY+ + Y G+
Sbjct: 656 IGNRCEIYTDHKSLKYIFTQSELNMRQRRWLELIKDYNLGIHYHPGK 702
Score = 57.0 bits (136), Expect(4) = 1e-32
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F E+KK LTT P+L L ++ ++ I+ D S
Sbjct: 549 FSKLARPMTELLKKEKKFEWSEACERSFQELKKRLTTAPVLTLPDIRKDFEIFCDASRQG 608
Query: 543 LGCV 532
LGCV
Sbjct: 609 LGCV 612
Score = 50.4 bits (119), Expect(4) = 1e-32
Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHEDR-VIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ +DR V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 611 CVLMQDRKVVAYASRQLRPHEVNYPTHDLELAAVVHALK 649
Score = 40.0 bits (92), Expect(4) = 1e-32
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -2
Query: 788 TVTEVRNFYAGLAGYYRRIVESFSKLA 708
TV+E+R+F GLAGYYRR +E FSKLA
Sbjct: 528 TVSEIRSFL-GLAGYYRRFIEGFSKLA 553
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 60.8 bits (146), Expect(4) = 2e-32
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDYD + Y G+
Sbjct: 1305 IGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGK 1351
Score = 57.8 bits (138), Expect(4) = 2e-32
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F EMKK LTT P+L L ++ ++ I+ D S
Sbjct: 1198 FSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQG 1257
Query: 543 LGCV 532
LGCV
Sbjct: 1258 LGCV 1261
Score = 49.7 bits (117), Expect(4) = 2e-32
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHEDR-VIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ ++R V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 1260 CVLMQERKVVAYASRQLRPHEANYPTHDLELAAVVHALK 1298
Score = 38.1 bits (87), Expect(4) = 2e-32
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 785 VTEVRNFYAGLAGYYRRIVESFSKLA 708
V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 1178 VSEIRSFL-GLAGYYRRFIEGFSKLA 1202
>emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]
Length = 1762
Score = 60.8 bits (146), Expect(4) = 2e-32
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDYD + Y G+
Sbjct: 1190 IGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGK 1236
Score = 57.8 bits (138), Expect(4) = 2e-32
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F EMKK LTT P+L L ++ ++ I+ D S
Sbjct: 1083 FSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQG 1142
Query: 543 LGCV 532
LGCV
Sbjct: 1143 LGCV 1146
Score = 49.7 bits (117), Expect(4) = 2e-32
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHEDR-VIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ ++R V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 1145 CVLMQERKVVAYASRQLRPHEANYPTHDLELAAVVHALK 1183
Score = 38.1 bits (87), Expect(4) = 2e-32
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 785 VTEVRNFYAGLAGYYRRIVESFSKLA 708
V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 1063 VSEIRSFL-GLAGYYRRFIEGFSKLA 1087
>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 60.8 bits (146), Expect(4) = 2e-32
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDYD + Y G+
Sbjct: 1187 IGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGK 1233
Score = 58.5 bits (140), Expect(4) = 2e-32
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F EMKK LTT P+L L ++ ++ I+ D S
Sbjct: 1080 FSKLARPMTELLKKEKKFQWSTACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQG 1139
Query: 543 LGCV 532
LGCV
Sbjct: 1140 LGCV 1143
Score = 48.9 bits (115), Expect(4) = 2e-32
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHEDR-VIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ ++R V+AYASRQ + H NYP HDLEL AVV ALK
Sbjct: 1142 CVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALK 1180
Score = 38.1 bits (87), Expect(4) = 2e-32
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 785 VTEVRNFYAGLAGYYRRIVESFSKLA 708
V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 1060 VSEIRSFL-GLAGYYRRFIEGFSKLA 1084
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 60.8 bits (146), Expect(4) = 3e-32
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -2
Query: 428 IKEKITLYLDHKSLKYFFSQKELNMR*RRWLEFLKDYDFTLEYPLGR 288
I + +Y DHKSLKY F+Q ELNMR RRWLE +KDYD + Y G+
Sbjct: 1279 IGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGK 1325
Score = 58.5 bits (140), Expect(4) = 3e-32
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = -1
Query: 723 FLQAS*PLTKLTQKDVSFVWANDCESAF*EMKKNLTTTPILFLLELDEELVIYTDVSGTK 544
F + + P+T+L +K+ F W+ CE +F EMKK LTT P+L L ++ ++ I+ D S
Sbjct: 1172 FSKLARPMTELLKKEKKFQWSTACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQG 1231
Query: 543 LGCV 532
LGCV
Sbjct: 1232 LGCV 1235
Score = 48.5 bits (114), Expect(4) = 3e-32
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -3
Query: 535 CVIHEDR-VIAYASRQWKIH*RNYPAHDLELVAVVFALK 422
CV+ ++R V+AYASRQ + H NYP HDLEL AV+ ALK
Sbjct: 1234 CVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVIHALK 1272
Score = 38.1 bits (87), Expect(4) = 3e-32
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 785 VTEVRNFYAGLAGYYRRIVESFSKLA 708
V+E+R+F GLAGYYRR +E FSKLA
Sbjct: 1152 VSEIRSFL-GLAGYYRRFIEGFSKLA 1176