BLASTX nr result
ID: Cocculus22_contig00010008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00010008
(360 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006422490.1| hypothetical protein CICLE_v10028628mg [Citr... 65 1e-08
ref|XP_007201260.1| hypothetical protein PRUPE_ppa008415mg [Prun... 64 2e-08
ref|XP_004292276.1| PREDICTED: signal recognition particle 43 kD... 63 4e-08
ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kD... 62 1e-07
emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera] 62 1e-07
gb|EEE58279.1| hypothetical protein OsJ_09298 [Oryza sativa Japo... 61 2e-07
gb|EAY88401.1| hypothetical protein OsI_09862 [Oryza sativa Indi... 61 2e-07
ref|NP_001048866.1| Os03g0131900 [Oryza sativa Japonica Group] g... 61 2e-07
sp|Q8LSQ2.1|SR43C_ORYSJ RecName: Full=Probable signal recognitio... 61 2e-07
gb|EYU30509.1| hypothetical protein MIMGU_mgv1a009550mg [Mimulus... 60 2e-07
ref|XP_002313685.2| chaos family protein [Populus trichocarpa] g... 60 2e-07
ref|XP_002305542.2| hypothetical protein POPTR_0004s18750g [Popu... 60 3e-07
ref|XP_002512388.1| ankyrin repeat domain protein, putative [Ric... 60 3e-07
ref|XP_006649340.1| PREDICTED: probable signal recognition parti... 60 4e-07
ref|NP_001168899.1| uncharacterized protein LOC100382705 [Zea ma... 59 7e-07
tpg|DAA43190.1| TPA: hypothetical protein ZEAMMB73_480591 [Zea m... 59 9e-07
ref|XP_006338501.1| PREDICTED: signal recognition particle 43 kD... 58 1e-06
ref|XP_002465920.1| hypothetical protein SORBIDRAFT_01g048210 [S... 58 1e-06
ref|XP_007041704.1| Chloroplast signal recognition particle comp... 58 2e-06
ref|XP_003562136.1| PREDICTED: probable signal recognition parti... 57 3e-06
>ref|XP_006422490.1| hypothetical protein CICLE_v10028628mg [Citrus clementina]
gi|568866640|ref|XP_006486658.1| PREDICTED: signal
recognition particle 43 kDa protein, chloroplastic-like
[Citrus sinensis] gi|557524424|gb|ESR35730.1|
hypothetical protein CICLE_v10028628mg [Citrus
clementina]
Length = 389
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGAL---TSKVEEAIGS*CFSSNG 167
G RE+LVKWTDI+EATWEPEENVD +LI+ FE+ ++ GA+ + + +A+G+ S G
Sbjct: 321 GKREFLVKWTDIDEATWEPEENVDPDLIKEFEDSQSDGAVLLNENHIGDAVGARAQLSEG 380
>ref|XP_007201260.1| hypothetical protein PRUPE_ppa008415mg [Prunus persica]
gi|462396660|gb|EMJ02459.1| hypothetical protein
PRUPE_ppa008415mg [Prunus persica]
Length = 333
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKVEEA 197
G EYLVKWTDI+EATWEPEENVD +LI+ FEE +N VEEA
Sbjct: 284 GTMEYLVKWTDIDEATWEPEENVDPDLIKEFEEAQNVSG-PGSVEEA 329
>ref|XP_004292276.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -3
Query: 328 EYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKV 206
EYLVKWTDI+EATWEPEENVD +LI+ FE+KE+ + ++ V
Sbjct: 324 EYLVKWTDIDEATWEPEENVDPDLIKEFEDKESCSSTSTGV 364
>ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Vitis vinifera]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKVE 203
G EYLVKWTDI+EATWEPEENVD +LI+ FEE A L + VE
Sbjct: 327 GNMEYLVKWTDIDEATWEPEENVDPDLIKAFEE-NGAADLGAHVE 370
>emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGALTSKVE 203
G EYLVKWTDI+EATWEPEENVD +LI+ FEE A L + VE
Sbjct: 327 GNMEYLVKWTDIDEATWEPEENVDPDLIKAFEE-NGAADLGAHVE 370
>gb|EEE58279.1| hypothetical protein OsJ_09298 [Oryza sativa Japonica Group]
Length = 363
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 346 KGGGGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
+G G EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 309 EGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 350
>gb|EAY88401.1| hypothetical protein OsI_09862 [Oryza sativa Indica Group]
Length = 388
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 346 KGGGGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
+G G EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 334 EGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 375
>ref|NP_001048866.1| Os03g0131900 [Oryza sativa Japonica Group]
gi|113547337|dbj|BAF10780.1| Os03g0131900, partial
[Oryza sativa Japonica Group]
Length = 383
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 346 KGGGGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
+G G EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 329 EGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 370
>sp|Q8LSQ2.1|SR43C_ORYSJ RecName: Full=Probable signal recognition particle 43 kDa protein,
chloroplastic; Flags: Precursor
gi|108706026|gb|ABF93821.1| 'chromo' domain containing
protein, expressed [Oryza sativa Japonica Group]
Length = 388
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = -3
Query: 346 KGGGGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
+G G EYLVKW DIEEATWEP ENVDAEL++ FE++++ A
Sbjct: 334 EGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQRQSGVA 375
>gb|EYU30509.1| hypothetical protein MIMGU_mgv1a009550mg [Mimulus guttatus]
Length = 338
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -3
Query: 343 GGGGREYLVKWTDIEEATWEPEENVDAELIRLFEE 239
G G +EYLVKW+DIEEATWEP ENVD +LI++F+E
Sbjct: 292 GDGRKEYLVKWSDIEEATWEPPENVDPDLIKVFDE 326
>ref|XP_002313685.2| chaos family protein [Populus trichocarpa]
gi|550331703|gb|EEE87640.2| chaos family protein
[Populus trichocarpa]
Length = 380
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAG 224
G EYLVKWTDI+EATWEPEENVD +LI+ FEE + G
Sbjct: 330 GKNEYLVKWTDIDEATWEPEENVDLDLIKEFEEGQING 367
>ref|XP_002305542.2| hypothetical protein POPTR_0004s18750g [Populus trichocarpa]
gi|550341346|gb|EEE86053.2| hypothetical protein
POPTR_0004s18750g [Populus trichocarpa]
Length = 311
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFEE 239
G EYLVKWTDI+EATWEPEENVD +LI+ FEE
Sbjct: 262 GKNEYLVKWTDIDEATWEPEENVDPDLIKEFEE 294
>ref|XP_002512388.1| ankyrin repeat domain protein, putative [Ricinus communis]
gi|223548349|gb|EEF49840.1| ankyrin repeat domain
protein, putative [Ricinus communis]
Length = 396
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3
Query: 358 GFDIKGGGGREYLVKWTDIEEATWEPEENVDAELIRLFEE 239
G ++ G EYLVKWTDI+EATWEPEENVD +LI+ FE+
Sbjct: 315 GKRVREDGKNEYLVKWTDIDEATWEPEENVDPDLIKEFED 354
>ref|XP_006649340.1| PREDICTED: probable signal recognition particle 43 kDa protein,
chloroplastic-like, partial [Oryza brachyantha]
Length = 374
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -3
Query: 343 GGGGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
G G EYLVKW DIEEATWEP ENVDAEL++ FE+ ++ A
Sbjct: 333 GEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQWQSGAA 373
>ref|NP_001168899.1| uncharacterized protein LOC100382705 [Zea mays]
gi|223973571|gb|ACN30973.1| unknown [Zea mays]
Length = 382
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = -3
Query: 346 KGGGGREYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
+G EYLVKW DIEEATWEP ENVD EL++ FE++++ A
Sbjct: 338 EGEDSWEYLVKWVDIEEATWEPAENVDTELVQKFEQQQSGSA 379
>tpg|DAA43190.1| TPA: hypothetical protein ZEAMMB73_480591 [Zea mays]
Length = 426
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = -3
Query: 328 EYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
EYLVKW DIEEATWEP ENVD EL++ FE++++ A
Sbjct: 388 EYLVKWVDIEEATWEPAENVDTELVQKFEQQQSGSA 423
>ref|XP_006338501.1| PREDICTED: signal recognition particle 43 kDa protein,
chloroplastic-like [Solanum tuberosum]
Length = 372
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -3
Query: 340 GGGREYLVKWTDIEEATWEPEENVDAELIRLFEE 239
GG EYLVKWTDIEEATWEPEENVD LI FE+
Sbjct: 332 GGKDEYLVKWTDIEEATWEPEENVDPLLIEDFEK 365
>ref|XP_002465920.1| hypothetical protein SORBIDRAFT_01g048210 [Sorghum bicolor]
gi|241919774|gb|EER92918.1| hypothetical protein
SORBIDRAFT_01g048210 [Sorghum bicolor]
Length = 435
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = -3
Query: 328 EYLVKWTDIEEATWEPEENVDAELIRLFEEKENAGA 221
EYLVKW DIEEATWEP ENVDAEL++ FE +++ A
Sbjct: 397 EYLVKWVDIEEATWEPAENVDAELVQEFELRQSGSA 432
>ref|XP_007041704.1| Chloroplast signal recognition particle component [Theobroma cacao]
gi|508705639|gb|EOX97535.1| Chloroplast signal
recognition particle component [Theobroma cacao]
Length = 401
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = -3
Query: 337 GGREYLVKWTDIEEATWEPEENVDAELIRLFE--EKENAGALTSK 209
G EYLVKW D+EEATWEPEENVD +LI+ FE + E GA+ S+
Sbjct: 333 GKNEYLVKWADMEEATWEPEENVDPDLIKEFEAGQIEGNGAVKSQ 377
>ref|XP_003562136.1| PREDICTED: probable signal recognition particle 43 kDa protein,
chloroplastic-like [Brachypodium distachyon]
Length = 399
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -3
Query: 340 GGGREYLVKWTDIEEATWEPEENVDAELIRLFEEK 236
GG EYLVKW DIEEATWEP ENVD EL++ FE +
Sbjct: 345 GGKWEYLVKWVDIEEATWEPAENVDDELVQEFERR 379