BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00009995
         (382 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313175.2| basic helix-loop-helix family protein [Popul...    61   2e-07
ref|XP_002300268.1| basic helix-loop-helix family protein [Popul...    61   2e-07
emb|CBI22462.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like ...    55   8e-06
ref|XP_002527508.1| DNA binding protein, putative [Ricinus commu...    55   8e-06

>ref|XP_002313175.2| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|550331367|gb|EEE87130.2| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 360

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 200 MEPVGTFAEGEYWSALCGMST-EEADFMAQLLGSCAMPGEHNEINPS--FGNPSSFSWRG 30
           ME +G+ AEGE WS+L GM T EEADFMAQLLG+C      N+++ S  FG PSSF W  
Sbjct: 1   MESIGSMAEGE-WSSLGGMYTSEEADFMAQLLGNCP-----NQVDSSSNFGVPSSF-WPN 53

Query: 29  HGPTMSMD 6
           H PT  M+
Sbjct: 54  HEPTTDME 61


>ref|XP_002300268.1| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|222847526|gb|EEE85073.1| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 317

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
 Frame = -3

Query: 200 MEPVGTFAEGEYWSALCGMST-EEADFMAQLLGSCAMPGEHNEINPSFGNPSSFSWRGHG 24
           MEP+G  AEGE WS+L GM T EEADFM QLL +C  P    + + SFG PSSF W  H 
Sbjct: 1   MEPIGATAEGE-WSSLSGMYTSEEADFMEQLLVNC--PPNQVDSSSSFGVPSSF-WPNHE 56

Query: 23  PTMSMD 6
            TM+M+
Sbjct: 57  STMNME 62


>emb|CBI22462.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = -3

Query: 200 MEPVGTFAEGEYWSALCGM-STEEADFMAQLLGSCAMPGEHNEINPSFGNPSSFSWRGH 27
           MEPVG  +EGE W +L GM +TEEA+FMAQLLG+C+      +   S G PS+F   GH
Sbjct: 1   MEPVGAISEGE-WGSLSGMYTTEEAEFMAQLLGNCSSFPNELDGGSSLGIPSAFWAAGH 58


>ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
          Length = 345

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = -3

Query: 200 MEPVGTFAEGEYWSALCGM-STEEADFMAQLLGSCAMPGEHNEINPSFGNPSSFSWRGH 27
           MEPVG  +EGE W +L GM +TEEA+FMAQLLG+C+      +   S G PS+F   GH
Sbjct: 1   MEPVGAISEGE-WGSLSGMYTTEEAEFMAQLLGNCSSFPNELDGGSSLGIPSAFWAAGH 58


>ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
           gi|223533148|gb|EEF34906.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 296

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/65 (52%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = -3

Query: 200 MEPVGTFAEGEYWSALCGMST-EEADFMAQLLGSCAMPGEHNEINPSFGNPSSFSWRGHG 24
           MEP+G   EGE WS+L GM T EEADFMAQLLGSC       +    FG  SS  W  H 
Sbjct: 1   MEPIGATLEGE-WSSLSGMYTHEEADFMAQLLGSCL------DSTSGFGVSSSSLWSSHE 53

Query: 23  PTMSM 9
             M+M
Sbjct: 54  SGMNM 58