BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00009927
         (907 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   507   e-141
gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]     489   e-136
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi...   480   e-133
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr...   480   e-133
ref|XP_002324235.2| pentatricopeptide repeat-containing family p...   480   e-133
ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prun...   478   e-132
gb|EYU45574.1| hypothetical protein MIMGU_mgv1a001941mg [Mimulus...   476   e-132
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   475   e-132
ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containi...   465   e-129
ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containi...   461   e-127
ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containi...   459   e-127
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   455   e-125
ref|XP_007154976.1| hypothetical protein PHAVU_003G162300g [Phas...   453   e-125
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...   450   e-124
gb|AEP33769.1| organelle transcript processing 82, partial [Olim...   423   e-116
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...   422   e-116
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu...   422   e-116
gb|AEP33758.1| organelle transcript processing 82, partial [Barb...   421   e-115
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...   421   e-115
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...   421   e-115

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  507 bits (1306), Expect = e-141
 Identities = 242/302 (80%), Positives = 272/302 (90%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA+HGHAN ++ELF +M  EGFEPDDITFVGVLSACSH+GL+ELGRQ F SMV+D
Sbjct: 437  AMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVED 496

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y ISP+LQHYGCMIDLLGRAGL  EA+AL+KNME+ PDGAIWGSLLGACR HGNVEL E 
Sbjct: 497  YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEF 556

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
            AAKHLF+ EPE+PG YVLLSNIYA A +W+DVA+IRTKL D+G KK+PGC+SIEVD VVH
Sbjct: 557  AAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVH 616

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DKVH +S+DIYKML EID+LLE  GHVPDTSEVLYD+DE+ KEG+L +HSE+LAI
Sbjct: 617  EFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAI 676

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST P TTIRIVKNLRVCGNCHSA KLISKIFNREIIARDR+RFHHFK+GSCSC+D
Sbjct: 677  AFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMD 736

Query: 7    YW 2
            YW
Sbjct: 737  YW 738


>gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]
          Length = 737

 Score =  489 bits (1258), Expect = e-136
 Identities = 235/302 (77%), Positives = 267/302 (88%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA+HGHA+ + ELFSKM  EGF+PDDI+FV VLSAC+++GL+ +GRQYF SMVQD
Sbjct: 436  AMISGLAVHGHASLAFELFSKMTDEGFKPDDISFVAVLSACNYAGLLGIGRQYFSSMVQD 495

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y +SP+LQHYG MIDLLGRAGL  EA++LIKNME+ PDGAIWGSLLGACR H  VEL E 
Sbjct: 496  YNVSPKLQHYGIMIDLLGRAGLFDEAESLIKNMEMKPDGAIWGSLLGACRAHRRVELGEF 555

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ L + EP +PG YVLLSNIYA AS+W+DVA+IRTKL D+G KK+PGCTSIEVD VVH
Sbjct: 556  VAERLSELEPGNPGPYVLLSNIYAGASRWDDVARIRTKLHDKGMKKVPGCTSIEVDNVVH 615

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DKVHP S+DIYKML EIDRLL+++G VPDTSEVLYD+DE LKEG+L +HSE+LAI
Sbjct: 616  EFLVGDKVHPLSEDIYKMLNEIDRLLDISGFVPDTSEVLYDMDEDLKEGSLSHHSEKLAI 675

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFKNGSCSC D
Sbjct: 676  AFGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKNGSCSCND 735

Query: 7    YW 2
            YW
Sbjct: 736  YW 737


>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Citrus sinensis]
          Length = 736

 Score =  480 bits (1236), Expect = e-133
 Identities = 225/302 (74%), Positives = 266/302 (88%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA+HG A+ ++ LFS+M+ EG +PDDITFVGVLSAC+H+GL+++GRQYF++M+QD
Sbjct: 435  AMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQD 494

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YKISP+LQHYGCM+DLLGRAGL  EA+AL+K ME+ PD AIW SLLGACR HG +EL E 
Sbjct: 495  YKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGES 554

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             AKHL + EPE+PG YVLLSN+YA A +W+DVA IRT+L D+G KK+PGC+SIEV  VVH
Sbjct: 555  VAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVH 614

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DKVHP+SK IY+ML EID LLE +G VPDTSEVLYD+DE+ KEGAL +HSE+LAI
Sbjct: 615  EFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAI 674

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            A+GLIST PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFK+G+CSC D
Sbjct: 675  AYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCND 734

Query: 7    YW 2
            YW
Sbjct: 735  YW 736



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           AMI+G A  G    ++ +F K+  E F P++ T V VLSAC+H G +ELG  +  S+++ 
Sbjct: 232 AMIAGYAQSGRYEEALAIFQKIREENFVPNESTVVTVLSACAHMGSLELG-NWVCSLIEG 290

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
           + +   L     +ID+  + G L +A  L +++E   D   W  ++G      + + A +
Sbjct: 291 HGLGSNLHVTNALIDMYSKCGDLVKARDLFESIE-KRDVISWNVMIGGYTHTSDYKEALM 349

Query: 547 AAKHLFK--FEPED 512
             + + +   EP D
Sbjct: 350 LFRQMLQSNIEPND 363


>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
            gi|557554208|gb|ESR64222.1| hypothetical protein
            CICLE_v10010823mg [Citrus clementina]
          Length = 736

 Score =  480 bits (1236), Expect = e-133
 Identities = 225/302 (74%), Positives = 266/302 (88%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA+HG A+ ++ LFS+M+ EG +PDDITFVGVLSAC+H+GL+++GRQYF++M+QD
Sbjct: 435  AMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQD 494

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YKISP+LQHYGCM+DLLGRAGL  EA+AL+K ME+ PD AIW SLLGACR HG +EL E 
Sbjct: 495  YKISPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGES 554

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             AKHL + EPE+PG YVLLSN+YA A +W+DVA IRT+L D+G KK+PGC+SIEV  VVH
Sbjct: 555  VAKHLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVH 614

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DKVHP+SK IY+ML EID LLE +G VPDTSEVLYD+DE+ KEGAL +HSE+LAI
Sbjct: 615  EFLVGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAI 674

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            A+GLIST PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFK+G+CSC D
Sbjct: 675  AYGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCND 734

Query: 7    YW 2
            YW
Sbjct: 735  YW 736



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           AMI+G A  G    ++ +F K+  E F P++ T V VLSAC+H G +ELG  +  S+++ 
Sbjct: 232 AMIAGYAQSGRYEEALAIFQKIREENFVPNESTVVTVLSACAHMGSLELG-NWVCSLIEG 290

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
           + +   L     +ID+  + G L +A  L +++E   D   W  ++G      + + A +
Sbjct: 291 HGLGSNLHVTNALIDMYSKCGGLVKARDLFESIE-KRDVISWNVMIGGYTHTSDYKEALM 349

Query: 547 AAKHLFK--FEPED 512
             + + +   EP D
Sbjct: 350 LFRQMLQSNIEPND 363


>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550317719|gb|EEF02800.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 736

 Score =  480 bits (1236), Expect = e-133
 Identities = 227/302 (75%), Positives = 258/302 (85%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISG A+HGH +T++ LFS+M  EGF PDDITFVGVL+AC H+GL+ LGR+YF SM+QD
Sbjct: 435  AMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQD 494

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YK+SP+L HYGCMIDL GRAGL  EA+ L+KNME+ PDGAIW SLLGACR H  +ELAE 
Sbjct: 495  YKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAES 554

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             AKHLF+ EPE+P  YVLLSNIYA A +WEDVAKIRT+L D   KK+PGC+SIEVD VVH
Sbjct: 555  VAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVH 614

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DKVHP+S +IYKML EID  LE  G VPDTSEVLYD+DE+ KEG L +HSE+LAI
Sbjct: 615  EFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAI 674

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGTTIRI+KNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFK+GSCSC D
Sbjct: 675  AFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKD 734

Query: 7    YW 2
            YW
Sbjct: 735  YW 736


>ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
            gi|462399488|gb|EMJ05156.1| hypothetical protein
            PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score =  478 bits (1229), Expect = e-132
 Identities = 228/302 (75%), Positives = 263/302 (87%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA+HGHA+T++ELFSKM  EGF+PD+ITFVGVLSAC+H GL++LGRQYF SM+ D
Sbjct: 413  AMISGLAMHGHAHTALELFSKMADEGFKPDEITFVGVLSACNHGGLVDLGRQYFSSMITD 472

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y IS QLQHYGCMIDLLGRAGL  EA+AL+ +ME+ PDGA+WGSLLGACR H  VEL E+
Sbjct: 473  YHISAQLQHYGCMIDLLGRAGLFDEAEALMSSMEMKPDGAVWGSLLGACRIHRRVELGEL 532

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             AKHLF+ EPE+ G YVLLSNIYA A +W+DVA+IRT+L D G KK+PGCTSIE+D VVH
Sbjct: 533  VAKHLFELEPENAGAYVLLSNIYAGAGRWDDVARIRTRLNDLGIKKVPGCTSIEMDSVVH 592

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLVSDK HP SK+IY+ML EIDRLL++ G  PDTSEVLYD+DE+ KE AL +HSE+LAI
Sbjct: 593  EFLVSDKAHPLSKEIYEMLKEIDRLLDMAGFRPDTSEVLYDMDEEWKEVALSHHSEKLAI 652

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGTTIRIVKNLRVC NCHSATKLISKIFNREIIARD +RFHHF++GSCSC D
Sbjct: 653  AFGLISTKPGTTIRIVKNLRVCANCHSATKLISKIFNREIIARDGNRFHHFRDGSCSCND 712

Query: 7    YW 2
             W
Sbjct: 713  NW 714



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 31/117 (26%), Positives = 57/117 (48%)
 Frame = -1

Query: 904 MISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQDY 725
           MI G     H   ++ LF  M+    +P+D+TF+G+L ACSH G ++LG+     + +++
Sbjct: 312 MIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSHLGALDLGKWIHAYIDKNF 371

Query: 724 KISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELA 554
           +       +  +ID+  + G +  A  +   ME     A W +++     HG+   A
Sbjct: 372 QSLTNTSLWTSLIDMYAKCGNIEAAKQVFNGME-AKSLASWNAMISGLAMHGHAHTA 427



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 35/107 (32%), Positives = 57/107 (53%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           AMISG A  G    ++ LFS+M      P++ T V VLSAC+ SG +ELG+ +  S +++
Sbjct: 210 AMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQSGSLELGK-WVGSWIEN 268

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLG 587
             +   L+    +ID+  + G L  A +L   ++   D   W  ++G
Sbjct: 269 RGLGSNLRLVNALIDMYAKCGALDTARSLFDGLQ-QRDVISWNVMIG 314


>gb|EYU45574.1| hypothetical protein MIMGU_mgv1a001941mg [Mimulus guttatus]
          Length = 736

 Score =  476 bits (1225), Expect = e-132
 Identities = 228/303 (75%), Positives = 261/303 (86%), Gaps = 1/303 (0%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEG-FEPDDITFVGVLSACSHSGLIELGRQYFDSMVQ 731
            AMISGLA+HG A+ +IELFSKM  EG F+PD+ITFV VLSAC H+GL++LGRQ F SMVQ
Sbjct: 434  AMISGLAMHGDASNAIELFSKMAKEGLFKPDEITFVSVLSACCHAGLVDLGRQIFKSMVQ 493

Query: 730  DYKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAE 551
            DY ISPQLQHYGCMIDLLGRAGL  EA  L++ MEI PDGAIWGS+LGACR H N+EL E
Sbjct: 494  DYNISPQLQHYGCMIDLLGRAGLFEEAMELVEGMEIEPDGAIWGSILGACRIHKNLELGE 553

Query: 550  VAAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVV 371
             AA+ LFK EP +PG Y+LLSNIYA+A KW++VA+IRT LKD+G KK+PG TSIEVDG V
Sbjct: 554  FAAEKLFKIEPNNPGSYILLSNIYARAGKWDEVARIRTLLKDKGMKKVPGSTSIEVDGAV 613

Query: 370  HEFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLA 191
            HEFLVSD+ H RS++IY ML EID +LE  GHVPDTSEV YD+DE+LKEG LC HSE+LA
Sbjct: 614  HEFLVSDRTHLRSEEIYMMLDEIDTVLEKAGHVPDTSEVYYDVDEELKEGVLCEHSEKLA 673

Query: 190  IAFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCL 11
            IAFGLIST PGTT+RIVKNLRVCGNCHSATKLISK++ REIIARDRSRFH FK+GSCSC+
Sbjct: 674  IAFGLISTKPGTTLRIVKNLRVCGNCHSATKLISKVYGREIIARDRSRFHRFKDGSCSCM 733

Query: 10   DYW 2
            DYW
Sbjct: 734  DYW 736


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449529868|ref|XP_004171920.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  475 bits (1223), Expect = e-132
 Identities = 223/302 (73%), Positives = 264/302 (87%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI GLA+HG A+ + ELFSKM  +G EP++ITFVG+LSAC H+GL++LG+Q+F SMVQD
Sbjct: 433  AMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD 492

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YKISP+ QHYGCMIDLLGRAGL  EA++L++NME+ PDGAIWGSLLGACR HG VEL E+
Sbjct: 493  YKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGEL 552

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ LF+ EP++PG YVLLSNIYA A KW+DVA+IRT+L DRG KK+PGCT+IEVD VVH
Sbjct: 553  VAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVH 612

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DKVHP+S+DIY+ML E+D  L++ G V DTSEVLYD+DE+ KEGAL +HSE+LAI
Sbjct: 613  EFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAI 672

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGT IRI+KNLRVC NCHSATKLISKIFNREIIARDR+RFHHFK+GSCSC D
Sbjct: 673  AFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCND 732

Query: 7    YW 2
            YW
Sbjct: 733  YW 734


>ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Solanum tuberosum]
          Length = 731

 Score =  465 bits (1197), Expect = e-129
 Identities = 219/301 (72%), Positives = 256/301 (85%)
 Frame = -1

Query: 904  MISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQDY 725
            MISGLA+HG A  ++ELF KM  E  +PDDITFV VLSAC+H+GL++LGR+YF++M+Q Y
Sbjct: 431  MISGLAMHGDAYEALELFRKMTEESMKPDDITFVSVLSACNHAGLVDLGREYFNTMIQSY 490

Query: 724  KISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEVA 545
            K +P+LQHYGCMIDLLGRAG   EA  +I++MEI PDGAIWGSLLG+CR H N+EL E A
Sbjct: 491  KYTPKLQHYGCMIDLLGRAGKFDEAMTMIESMEIKPDGAIWGSLLGSCRIHKNLELGEYA 550

Query: 544  AKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVHE 365
            AK+LF+ EPE+PG YVLLSNIYA A  W+ VA IRT L D+G KK+PGCTSIE+D VVHE
Sbjct: 551  AKNLFELEPENPGAYVLLSNIYAGAGNWDKVASIRTFLNDQGMKKVPGCTSIEIDRVVHE 610

Query: 364  FLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAIA 185
            FLVSD+ HP+S DIYKML E+DRLLE+ GH PDTSEV Y++DE+ KE  L  HSE+LAIA
Sbjct: 611  FLVSDRTHPQSNDIYKMLDEVDRLLEMAGHAPDTSEVHYEMDEEWKEEKLNQHSEKLAIA 670

Query: 184  FGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLDY 5
            FGLIST PGTT+RIVKNLRVCGNCH ATK+ISKIFNREIIARDR+RFHHFKNGSCSCLDY
Sbjct: 671  FGLISTKPGTTLRIVKNLRVCGNCHEATKMISKIFNREIIARDRNRFHHFKNGSCSCLDY 730

Query: 4    W 2
            W
Sbjct: 731  W 731


>ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cicer arietinum]
          Length = 737

 Score =  461 bits (1187), Expect = e-127
 Identities = 218/302 (72%), Positives = 257/302 (85%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AM+SGLA+HGHA  ++ LFS+MV +GF+PDDITFVG+LSAC+ +GL++LG+ YF SM+QD
Sbjct: 436  AMLSGLAMHGHAEKALALFSEMVDKGFQPDDITFVGILSACTQAGLVDLGQNYFRSMMQD 495

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y I P+LQHYGCMIDLL RAG   EA+ L+KNME+ PDGAIWGSLL AC+ HG VEL E 
Sbjct: 496  YGICPKLQHYGCMIDLLARAGKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVELGEY 555

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ LF+ EPE+ G +VLLSNIYA A KW++VA+IRT+L D+G KK+PGCTSIE+DGVVH
Sbjct: 556  VAERLFQLEPENAGAFVLLSNIYAGAGKWDEVARIRTRLNDKGMKKVPGCTSIEIDGVVH 615

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DK HP  K+IY ML EID+LLE  G VPDTSEVLYD+DE+ KEGAL  HSE+LAI
Sbjct: 616  EFLVGDKFHPECKNIYSMLDEIDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSEKLAI 675

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PG+TIRIVKNLRVCGNCHSATKLISKIFNR+IIARDR+RFHHFK+G CSC D
Sbjct: 676  AFGLISTKPGSTIRIVKNLRVCGNCHSATKLISKIFNRQIIARDRNRFHHFKDGFCSCND 735

Query: 7    YW 2
             W
Sbjct: 736  CW 737



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
 Frame = -1

Query: 904 MISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQDY 725
           MISG +       ++ LF  M+    +P+DITF+G+L AC+  G ++LG+  +  + ++ 
Sbjct: 335 MISGYSYLSLYEEALALFDVMLRSNVKPNDITFLGILPACACLGALDLGKWVYAYIDKNL 394

Query: 724 KISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEVA 545
           K S     +  +ID+  + G +  A+ + ++M  +   A W ++L     HG+ E A   
Sbjct: 395 KSSSNASLWTSLIDMYAKCGCIEAAEWVFRSMNSSSLSA-WNAMLSGLAMHGHAEKALAL 453

Query: 544 AKHLFK--FEPED 512
              +    F+P+D
Sbjct: 454 FSEMVDKGFQPDD 466


>ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 737

 Score =  459 bits (1180), Expect = e-127
 Identities = 219/302 (72%), Positives = 255/302 (84%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA++GHA  ++ LF +M+ EGF+PDDITFVGVLSAC+ +G +ELG +YF SM +D
Sbjct: 436  AMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKD 495

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y ISP+LQHYGCMIDLL R+G   EA  L+ NME+ PDGAIWGSLL ACR HG VE  E 
Sbjct: 496  YGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEY 555

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ LF+ EPE+ G YVLLSNIYA A +W+DVAKIRTKL D+G KK+PGCTSIE+DGVVH
Sbjct: 556  VAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVH 615

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DK HP+S++I++ML E+DRLLE TG VPDTSEVLYD+DE+ KEGAL  HSE+LAI
Sbjct: 616  EFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAI 675

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PG+TIRIVKNLRVC NCHSATKLISKIFNREIIARDR+RFHHFK+G CSC D
Sbjct: 676  AFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCND 735

Query: 7    YW 2
             W
Sbjct: 736  RW 737


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao] gi|508783730|gb|EOY30986.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative [Theobroma cacao]
          Length = 847

 Score =  455 bits (1170), Expect = e-125
 Identities = 219/294 (74%), Positives = 256/294 (87%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISGLA+HG A+ ++ELFS+M+  G +PDDITFVGVLSAC+H+GL++LGRQYF SMVQ+
Sbjct: 493  AMISGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSACTHAGLLDLGRQYFSSMVQE 552

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y ISP LQHYGCM++LLGRAGL  EA+ALI+NME+ PDGAIWGSLLGACR H  VEL E 
Sbjct: 553  YAISPDLQHYGCMVNLLGRAGLFDEAEALIQNMEMKPDGAIWGSLLGACRVHKRVELGES 612

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ L + EP++PG YVLLSNIYA A +W+DVA+IRT L ++G KK+PGC+SIEVD VVH
Sbjct: 613  VAQRLLELEPDNPGAYVLLSNIYAGAGRWDDVARIRTLLNNKGMKKVPGCSSIEVDSVVH 672

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLVSDKVHPR K+IY ML E+D LLE  G VPDTSEV+ D+DE+ KEGAL +HSE+LAI
Sbjct: 673  EFLVSDKVHPRCKEIYDMLNEVDTLLEKAGFVPDTSEVIRDMDEEWKEGALSHHSEKLAI 732

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNG 26
            AFGLIST PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFK+G
Sbjct: 733  AFGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDG 786



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 30/117 (25%), Positives = 59/117 (50%)
 Frame = -1

Query: 904 MISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQDY 725
           MI G     +   ++ LF +M+    EP D+TF+ VL AC++ G ++LG+     + +++
Sbjct: 392 MIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGALDLGKWIHAYIDKNF 451

Query: 724 KISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELA 554
           + S  +  +  +ID+  + G +  A  +   ME   + A W +++     HG  + A
Sbjct: 452 QNSTNISLWTSLIDMYAKCGSIEAAQQVFNGME-QKNLASWNAMISGLAMHGLADKA 507


>ref|XP_007154976.1| hypothetical protein PHAVU_003G162300g [Phaseolus vulgaris]
            gi|561028330|gb|ESW26970.1| hypothetical protein
            PHAVU_003G162300g [Phaseolus vulgaris]
          Length = 733

 Score =  453 bits (1166), Expect = e-125
 Identities = 213/302 (70%), Positives = 254/302 (84%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMISG A++GHA  ++ LF +M+ EGF+PDDITFVGVLSAC+ +GL++LG +YF SM QD
Sbjct: 432  AMISGFAMNGHAERALALFEEMIKEGFQPDDITFVGVLSACTQAGLVDLGHRYFSSMNQD 491

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            + ISP+LQHYGCMIDLL R G   EA  ++ NM++ PDGAIWGSLL ACR HG VE  E 
Sbjct: 492  FGISPKLQHYGCMIDLLARGGKFEEAKVMMGNMQMEPDGAIWGSLLNACRIHGQVEFGEY 551

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ LF+ EPE+ G YVLLSNIYA A +W+DVA+IRT+L D+G KK+PGCTSIE+DG+VH
Sbjct: 552  VAEQLFQLEPENSGAYVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGIVH 611

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFLV DK+H +S+ IY+ML E+D+LLE +G VPDTSEVLYD+DE+ KEGAL  HSE+LAI
Sbjct: 612  EFLVGDKLHSQSEYIYRMLDEVDKLLEESGFVPDTSEVLYDMDEEWKEGALTQHSEKLAI 671

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFK+G CSC D
Sbjct: 672  AFGLISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCND 731

Query: 7    YW 2
             W
Sbjct: 732  CW 733


>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 738

 Score =  450 bits (1158), Expect = e-124
 Identities = 215/303 (70%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEG-FEPDDITFVGVLSACSHSGLIELGRQYFDSMVQ 731
            AM+SG A+HGHA  ++ LFS+MV +G F PDDITFVGVLSAC+ +GL++LG QYF SM+Q
Sbjct: 436  AMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ 495

Query: 730  DYKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAE 551
            DY ISP+LQHYGCMIDLL RA    EA+ L+KNME+ PDGAIWGSLL AC+ HG VE  E
Sbjct: 496  DYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGE 555

Query: 550  VAAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVV 371
              A+ LF+ EPE+ G +VLLSNIYA A +W+DVA+IRT+L D+G KK+PGCTSIE+DG V
Sbjct: 556  YVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDV 615

Query: 370  HEFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLA 191
            HEFLV DK HP   +IYKML E+D+LLE  G VP+TSEVLYD+DE+ KEGAL  HSE+LA
Sbjct: 616  HEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLA 675

Query: 190  IAFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCL 11
            I+FGLI T PGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDR+RFHHFK+G CSC 
Sbjct: 676  ISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCN 735

Query: 10   DYW 2
            D W
Sbjct: 736  DCW 738



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
 Frame = -1

Query: 904 MISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQDY 725
           MI G +       ++ LF  M+    +P+D+TF+G+L AC+  G ++LG+     + ++ 
Sbjct: 335 MIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL 394

Query: 724 KISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELA--- 554
           + S     +  +ID+  + G +  A+ + ++M  + + A W ++L     HG+ E A   
Sbjct: 395 RNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH-SRNLASWNAMLSGFAMHGHAERALAL 453

Query: 553 --EVAAKHLFKFEPED 512
             E+  K LF+  P+D
Sbjct: 454 FSEMVNKGLFR--PDD 467


>gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis pumila]
          Length = 710

 Score =  423 bits (1087), Expect = e-116
 Identities = 197/302 (65%), Positives = 242/302 (80%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI G A+HG AN + ++FS+M   G EPDDITFVG+LSACSHSG+++LGR  F SM +D
Sbjct: 409  AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRD 468

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YK+ P+L+HYGCMIDL G +GL  EA+ +I  ME+ PDG IW SLL AC+ HGNVEL E 
Sbjct: 469  YKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGES 528

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A++L K EPE+PG YVLLSNIYA A +W +VAK R  L D+G KK+PGC+SIE+D VVH
Sbjct: 529  YAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 588

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EF++ DK HPR+++IY ML E++ LLE  G VPDTSEVL +++E+ KEGAL +HSE+LAI
Sbjct: 589  EFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 648

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGT + IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF++G CSC D
Sbjct: 649  AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCND 708

Query: 7    YW 2
            YW
Sbjct: 709  YW 710



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 42/107 (39%), Positives = 57/107 (53%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           A ISG A  G+   ++ELF KM+     PD+ T V VLSAC+ SG IELGRQ   S + D
Sbjct: 205 AXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQ-VHSWIND 263

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLG 587
           +     L+    +IDL  + G L  A  L + +    D   W +L+G
Sbjct: 264 HGFGXNLKIVNALIDLYSKCGELETACGLFQGLS-NKDVISWNTLIG 309


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
            gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
            [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
            chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score =  422 bits (1086), Expect = e-116
 Identities = 198/302 (65%), Positives = 244/302 (80%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI G A+HG A+ S +LFS+M   G +PDDITFVG+LSACSHSG+++LGR  F +M QD
Sbjct: 440  AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YK++P+L+HYGCMIDLLG +GL  EA+ +I  ME+ PDG IW SLL AC+ HGNVEL E 
Sbjct: 500  YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 559

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A++L K EPE+PG YVLLSNIYA A +W +VAK R  L D+G KK+PGC+SIE+D VVH
Sbjct: 560  FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EF++ DK HPR+++IY ML E++ LLE  G VPDTSEVL +++E+ KEGAL +HSE+LAI
Sbjct: 620  EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 679

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGT + IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF++G CSC D
Sbjct: 680  AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 739

Query: 7    YW 2
            YW
Sbjct: 740  YW 741



 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 40/107 (37%), Positives = 56/107 (52%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           AMISG A  G+   ++ELF  M+     PD+ T V V+SAC+ SG IELGRQ     + D
Sbjct: 236 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHLWIDD 294

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLG 587
           +     L+    +IDL  + G L  A  L + +    D   W +L+G
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVISWNTLIG 340


>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  422 bits (1086), Expect = e-116
 Identities = 198/302 (65%), Positives = 244/302 (80%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI G A+HG AN + ++FS+M     EPDDITFVG+LSACSHSG+++LGR  F SM +D
Sbjct: 394  AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKED 453

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YKI+P+L+HYGCMIDLLG +GL  EA+ +I  ME+ PDG IW SLL AC+ HGNVEL E 
Sbjct: 454  YKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGES 513

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A++L K EP++PG YVLLSNIYA A +W +VAKIR  L D+G KK+PGC+SIE+D VVH
Sbjct: 514  YAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 573

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EF++ DK HPR+++IY ML E++ LLE  G VPDTSEVL +++E+ KEGAL +HSE+LAI
Sbjct: 574  EFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 633

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGT + IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF++G CSC D
Sbjct: 634  AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 693

Query: 7    YW 2
            YW
Sbjct: 694  YW 695



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 39/107 (36%), Positives = 57/107 (53%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           AMISG A  G+   ++ELF +M+     PD+ T V V+SAC+ S  IELGRQ   S + D
Sbjct: 190 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ-VHSWIDD 248

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLG 587
           +     L+    +IDL  + G +  A  L + +    D   W +L+G
Sbjct: 249 HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY-KDVISWNTLIG 294


>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  421 bits (1083), Expect = e-115
 Identities = 197/302 (65%), Positives = 242/302 (80%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI G A+HG AN + ++FS+M   G EPDDITFVG+LSACSHSG+++LGR+ F SM Q+
Sbjct: 409  AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQN 468

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YKI+P+L+HYGCMIDLLG  GL  EA+ +I  M + PDG IW SLL AC+ HGNVEL E 
Sbjct: 469  YKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGES 528

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ L K EPE+PG YVLLSNIYA A +W +VA IR  L D+G KK+PGC+SIE+D VVH
Sbjct: 529  FAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVH 588

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EF++ DK HPR+++IY ML E++ LLE  G VPDTSEVL +++E+ K+GAL +HSE+LAI
Sbjct: 589  EFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAI 648

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGT + IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF++G CSC D
Sbjct: 649  AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 708

Query: 7    YW 2
            YW
Sbjct: 709  YW 710



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 36/107 (33%), Positives = 60/107 (56%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           A+ISG A  G+   +++LF +M+    +PD+ T V V+SAC+ SG I+LGRQ   S + D
Sbjct: 205 AIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ-VHSWIDD 263

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLG 587
           + +   L+    +IDL  + G +  A  L + +    D   W +++G
Sbjct: 264 HGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS-NKDVISWNTMIG 309


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
            gi|482575565|gb|EOA39752.1| hypothetical protein
            CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score =  421 bits (1082), Expect = e-115
 Identities = 197/302 (65%), Positives = 245/302 (81%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI G A+HG AN + ++FS+M   G EPDDITFVG+LSACSHSG+++LGR  F SM + 
Sbjct: 439  AMIFGFAMHGRANAAFDIFSRMGKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEV 498

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            YKI+P+L+HYGCMIDLLG +GL  EA+ +I +ME+ PDG IW SLL AC+ HGNVEL E 
Sbjct: 499  YKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGES 558

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A++L K EP++ G YVLLSNIYA A +W +VAKIR  L D+G KK+PGC+SIE+D VVH
Sbjct: 559  FAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 618

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EF++ DK+HPR+++IY ML E++ LLE  G VPDTSEVL +++E+ KEGAL +HSE+LAI
Sbjct: 619  EFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 678

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSCSCLD 8
            AFGLIST PGT + IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF++G CSC D
Sbjct: 679  AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 738

Query: 7    YW 2
            YW
Sbjct: 739  YW 740



 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 39/107 (36%), Positives = 57/107 (53%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           A+ISG A  G+   ++ELF +M+    +PD+ T V VLSAC  S  IELGRQ   S + D
Sbjct: 235 ALISGYAETGNYKEALELFKEMMQTNVKPDESTMVTVLSACGQSASIELGRQ-VHSWIDD 293

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLG 587
           +     L+    +IDL  + G +  A  L + +    D   W +L+G
Sbjct: 294 HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY-KDVISWNTLIG 339


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema cordifolium]
          Length = 679

 Score =  421 bits (1082), Expect = e-115
 Identities = 198/296 (66%), Positives = 244/296 (82%)
 Frame = -1

Query: 907  AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
            AMI G A+HG A+ + +L S+M  +G EPDDITFVG+LSACSH+GL +LGR+ F SM  D
Sbjct: 384  AMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLD 443

Query: 727  YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
            Y+I P+L+HYGCMIDLLGR+GL  EA+ LI +M + PDG IWGSLL AC+ H N+EL E+
Sbjct: 444  YRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGEL 503

Query: 547  AAKHLFKFEPEDPGGYVLLSNIYAQASKWEDVAKIRTKLKDRGKKKIPGCTSIEVDGVVH 368
             A+ L K EP++PG YVLLSNIYA +++W+DVA++RT L D+G KK+PGC+SIE+D +VH
Sbjct: 504  IAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVH 563

Query: 367  EFLVSDKVHPRSKDIYKMLGEIDRLLELTGHVPDTSEVLYDIDEKLKEGALCYHSERLAI 188
            EFL+ DK HP++K+IYKML EID LL  TG V DTSEVL +++E+LKEGAL YHSE+LAI
Sbjct: 564  EFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAI 623

Query: 187  AFGLISTSPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRSRFHHFKNGSC 20
            AFGLIST PGT +RIVKNLRVC NCH ATKLISKI+ REIIARDRSRFHHFK+G C
Sbjct: 624  AFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 46/146 (31%), Positives = 75/146 (51%)
 Frame = -1

Query: 907 AMISGLALHGHANTSIELFSKMVVEGFEPDDITFVGVLSACSHSGLIELGRQYFDSMVQD 728
           AMISG A  G    ++ELF++M+    +PD+ T   VLS C+HSG +ELGRQ   S + +
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQ-IHSWIDN 238

Query: 727 YKISPQLQHYGCMIDLLGRAGLLAEADALIKNMEITPDGAIWGSLLGACRFHGNVELAEV 548
           +     L+    +IDL  + G +  A  L + ++   D   W +L+G   +  + + A +
Sbjct: 239 HGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY-KDVISWNTLIGGYAYINHHKEALL 297

Query: 547 AAKHLFKFEPEDPGGYVLLSNIYAQA 470
             + + K   E P    +LS + A A
Sbjct: 298 VFQEMLKL-GETPNDVTMLSILPACA 322