BLASTX nr result
ID: Cocculus22_contig00009920
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00009920
(768 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 259 1e-66
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 259 1e-66
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 257 3e-66
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr... 251 2e-64
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein... 251 2e-64
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi... 248 2e-63
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi... 239 1e-60
gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus... 236 7e-60
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 231 2e-58
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis] 230 4e-58
ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prun... 229 6e-58
ref|XP_006381622.1| pentatricopeptide repeat-containing family p... 225 1e-56
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi... 224 2e-56
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi... 222 1e-55
gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis] 219 1e-54
ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containi... 216 5e-54
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps... 216 9e-54
ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containi... 214 4e-53
ref|XP_006581143.1| PREDICTED: pentatricopeptide repeat-containi... 214 4e-53
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi... 213 6e-53
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 259 bits (661), Expect = 1e-66
Identities = 135/255 (52%), Positives = 175/255 (68%), Gaps = 6/255 (2%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH +Y+ L+++LC+ GL++SA K+VFD G PD + + LVSS A+ GKLD A
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSA-KIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163
Query: 582 KRLLVQA-CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVT 406
K L + C+G IK + VDEA+ F+ EHL F PD SFNI+
Sbjct: 164 KNFLNEVHCYG-IKVSPFVYNNLLNMLVKQNLVDEAVLLFR-EHLEPYFVPDVYSFNILI 221
Query: 405 RGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGL 226
RGLCR+G+ID AFE F +MG+F C PD+V+YNTLI+GFCR ++ KG++LL + G+
Sbjct: 222 RGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGV 281
Query: 225 SPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVA 46
SPDV+TYTS+ISGYCKLG M+ AS L DEM+S I PN FTFNVLI+GFGK+GNMRSA+
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341
Query: 45 TYENMLSRGCVPDVV 1
YE ML GC+PDVV
Sbjct: 342 MYEKMLLLGCLPDVV 356
Score = 103 bits (258), Expect = 5e-20
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 5/250 (2%)
Frame = -1
Query: 735 VKSYNFLVKSLCQA-----GLHESASKLVFDGHFPDGPVFDFLVSSCAQSGKLDIAKRLL 571
+ SYN L+ C+ G ++ G PD + ++S + G + A L
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELF 308
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
+ IK + A+ + ++ L LG PD +F + G CR
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY-EKMLLLGCLPDVVTFTSLIDGYCR 367
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVV 211
G+++ +L+ +M + SP+V TY LI+ C+ + + L ++ + + P
Sbjct: 368 EGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLK-SSEVVPKPF 426
Query: 210 TYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
Y VI G+CK GK++EA+ ++ EM K+ P+ TF +LI G G M A++T+ M
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM 486
Query: 30 LSRGCVPDVV 1
+ CVPD +
Sbjct: 487 IEINCVPDEI 496
Score = 69.3 bits (168), Expect = 1e-09
Identities = 42/156 (26%), Positives = 76/156 (48%)
Frame = -1
Query: 468 FKDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFC 289
F HL + +T ++++ R LC++G D A +F+ M S PD L+ +
Sbjct: 98 FSRTHLSINHTFNT--YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYA 155
Query: 288 RAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNS 109
R +D L ++ G+ Y ++++ K ++EA L E + +P+
Sbjct: 156 RMGKLDSAKNFLNEVH-CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDV 214
Query: 108 FTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
++FN+LI G +IG + A ++NM + GC PD+V
Sbjct: 215 YSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIV 250
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 259 bits (661), Expect = 1e-66
Identities = 135/255 (52%), Positives = 175/255 (68%), Gaps = 6/255 (2%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH +Y+ L+++LC+ GL++SA K+VFD G PD + + LVSS A+ GKLD A
Sbjct: 105 INHTFNTYDLLMRNLCKVGLNDSA-KIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA 163
Query: 582 KRLLVQA-CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVT 406
K L + C+G IK + VDEA+ F+ EHL F PD SFNI+
Sbjct: 164 KNFLNEVHCYG-IKVSPFVYNNLLNMLVKQNLVDEAVLLFR-EHLEPYFVPDVYSFNILI 221
Query: 405 RGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGL 226
RGLCR+G+ID AFE F +MG+F C PD+V+YNTLI+GFCR ++ KG++LL + G+
Sbjct: 222 RGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGV 281
Query: 225 SPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVA 46
SPDV+TYTS+ISGYCKLG M+ AS L DEM+S I PN FTFNVLI+GFGK+GNMRSA+
Sbjct: 282 SPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMV 341
Query: 45 TYENMLSRGCVPDVV 1
YE ML GC+PDVV
Sbjct: 342 MYEKMLLLGCLPDVV 356
Score = 103 bits (258), Expect = 5e-20
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 5/250 (2%)
Frame = -1
Query: 735 VKSYNFLVKSLCQA-----GLHESASKLVFDGHFPDGPVFDFLVSSCAQSGKLDIAKRLL 571
+ SYN L+ C+ G ++ G PD + ++S + G + A L
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELF 308
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
+ IK + A+ + ++ L LG PD +F + G CR
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY-EKMLLLGCLPDVVTFTSLIDGYCR 367
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVV 211
G+++ +L+ +M + SP+V TY LI+ C+ + + L ++ + + P
Sbjct: 368 EGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLK-SSEVVPKPF 426
Query: 210 TYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
Y VI G+CK GK++EA+ ++ EM K+ P+ TF +LI G G M A++T+ M
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM 486
Query: 30 LSRGCVPDVV 1
+ CVPD +
Sbjct: 487 IEINCVPDEI 496
Score = 69.3 bits (168), Expect = 1e-09
Identities = 42/156 (26%), Positives = 76/156 (48%)
Frame = -1
Query: 468 FKDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFC 289
F HL + +T ++++ R LC++G D A +F+ M S PD L+ +
Sbjct: 98 FSRTHLSINHTFNT--YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYA 155
Query: 288 RAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNS 109
R +D L ++ G+ Y ++++ K ++EA L E + +P+
Sbjct: 156 RMGKLDSAKNFLNEVH-CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDV 214
Query: 108 FTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
++FN+LI G +IG + A ++NM + GC PD+V
Sbjct: 215 YSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIV 250
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 257 bits (657), Expect = 3e-66
Identities = 132/253 (52%), Positives = 171/253 (67%), Gaps = 4/253 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLV----FDGHFPDGPVFDFLVSSCAQSGKLDIAK 580
L H ++Y+FL++SL + G HESA + DGH PD V FLVSS +GK +IA+
Sbjct: 133 LCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIAR 192
Query: 579 RLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRG 400
+ ++ + VDEA+CFF+ E + L D+CSFNI+ RG
Sbjct: 193 TWV-----DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFR-EQMGLHGPFDSCSFNILIRG 246
Query: 399 LCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSP 220
LCR+GK+D AFELFN+M F CSPDV+TYNTLI+GFCR +VD+G++LL ++ K LSP
Sbjct: 247 LCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSP 306
Query: 219 DVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATY 40
DVVTYTS+ISGYCKLGKME+AS L + MIS I PN+FTFN+LINGFGK+G+M SA Y
Sbjct: 307 DVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMY 366
Query: 39 ENMLSRGCVPDVV 1
E ML GC PD++
Sbjct: 367 EEMLLLGCPPDII 379
Score = 99.0 bits (245), Expect = 2e-18
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
S+N L++ LC+ G + A +L + G PD ++ L++ + ++D LL +
Sbjct: 239 SFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKEL 298
Query: 561 CH-GKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
+ +++A F + + G P+ +FNI+ G ++G
Sbjct: 299 LSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNM-ISSGIKPNAFTFNILINGFGKVG 357
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVT- 208
+ A ++ +M C PD++T+ +LIDG CR V++ +L ++ + LSP+ T
Sbjct: 358 DMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARN-LSPNEYTF 416
Query: 207 ----------------------------------YTSVISGYCKLGKMEEASALLDEMIS 130
Y VI G+CK G ++EA+ +L EM
Sbjct: 417 AILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEE 476
Query: 129 KRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
KR P+ T+ +LI G G + A++ + ML GC PD +
Sbjct: 477 KRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSI 519
Score = 79.0 bits (193), Expect = 2e-12
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGL----HESASKLVFDGHF-PDGPVFDFLVSSCAQSGKLDIAKRLL 571
V +YN L+ C+ H+ +L+ PD + ++S + GK++ A L
Sbjct: 272 VITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILF 331
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
IK + A + +E L LG PD +F + G CR
Sbjct: 332 NNMISSGIKPNAFTFNILINGFGKVGDMVSAENMY-EEMLLLGCPPDIITFTSLIDGHCR 390
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVT----------------------------------- 316
GK++ + +L++++ + + SP+ T
Sbjct: 391 TGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFM 450
Query: 315 YNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEM 136
YN +IDGFC+A +VD+ +L ++ K PD +TYT +I G+C G++ EA ++ + M
Sbjct: 451 YNPVIDGFCKAGNVDEANVILAEMEEKR-CKPDKITYTILIIGHCMKGRLSEAISIFNRM 509
Query: 135 ISKRIMPNSFTFNVLINGFGKIG 67
+ P+S T LI+ K G
Sbjct: 510 LGTGCAPDSITMTSLISCLLKAG 532
>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
gi|557556032|gb|ESR66046.1| hypothetical protein
CICLE_v10007804mg [Citrus clementina]
Length = 595
Score = 251 bits (642), Expect = 2e-64
Identities = 132/254 (51%), Positives = 174/254 (68%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
LNH K+YN +++SLC+ GLH+S ++VFD GH P+ P+ +F VSSC ++GK D A
Sbjct: 152 LNHSFKTYNLVMRSLCEMGLHDSV-QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
K LL Q G++ + DEA+ FK E+ RL PDT +FNI+ R
Sbjct: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-EYFRLYSQPDTWTFNILIR 269
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR+G++ AFE F DMGSF CSPD+VTYNTLI G CR +V +G+ELL +++ K+
Sbjct: 270 GLCRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFL 329
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDVVTYTSVISGYCKLGKM++A+++ +EM S I P++ TFNVLI+GFGK+GNM SA
Sbjct: 330 PDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
Query: 42 YENMLSRGCVPDVV 1
E MLS G +PDVV
Sbjct: 390 RERMLSLGYLPDVV 403
Score = 108 bits (271), Expect = 2e-21
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
Frame = -1
Query: 735 VKSYNFLVKSLCQ----AGLHESASKLVFDGHF-PDGPVFDFLVSSCAQSGKLDIAKRLL 571
+ +YN L+ LC+ A HE ++ F F PD + ++S + GK+D A +
Sbjct: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFLPDVVTYTSVISGYCKLGKMDKATSIY 355
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
+ IK + A + ++ L LG+ PD +F+ + G CR
Sbjct: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSLGYLPDVVTFSSLIDGYCR 414
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVV 211
G+++ +L ++M + SP+V T+ LI+ C+ ++ L Q++ L P
Sbjct: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFAILINALCKENRLNDARRFLKQLK-WNDLVPKPF 473
Query: 210 TYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
Y VI G+CK G ++EA+ ++ EM KR P+ TF +LI G G M A++ + M
Sbjct: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
Query: 30 LSRGCVPD 7
L GC PD
Sbjct: 534 LRIGCAPD 541
Score = 102 bits (253), Expect = 2e-19
Identities = 81/304 (26%), Positives = 121/304 (39%), Gaps = 51/304 (16%)
Frame = -1
Query: 759 NGDELNHLVKSY------------NFLVKSLCQAGLHESASKLVFD----GHFPDGPVFD 628
N DE ++ K Y N L++ LC+ G + A + +D G PD ++
Sbjct: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIRGLCRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
Query: 627 FLVSSCAQSGKLDIAKRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLR 448
L+S + ++ LL + FK E
Sbjct: 301 TLISGLCRVNEVARGHELLKEVK------------------------------FKSE--- 327
Query: 447 LGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDK 268
F PD ++ V G C+LGK+D A ++N+M S P VT+N LIDGF + ++
Sbjct: 328 --FLPDVVTYTSVISGYCKLGKMDKATSIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
Query: 267 GYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLI 88
E + + G PDVVT++S+I GYC+ G++ + L DEM K + PN +TF +LI
Sbjct: 386 A-EYMRERMLSLGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFAILI 444
Query: 87 N-----------------------------------GFGKIGNMRSAVATYENMLSRGCV 13
N GF K GN+ A M + C
Sbjct: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
Query: 12 PDVV 1
PD V
Sbjct: 505 PDKV 508
>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 592
Score = 251 bits (641), Expect = 2e-64
Identities = 128/252 (50%), Positives = 170/252 (67%), Gaps = 5/252 (1%)
Frame = -1
Query: 741 HLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIAKR 577
H +YN L++S C GLH+SA KLVFD GH PD + F++SS ++G+ +AK+
Sbjct: 151 HSFWTYNLLMRSFCHMGLHDSA-KLVFDYMRIDGHLPDTTILGFMISSFGRAGEFGMAKK 209
Query: 576 LLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGL 397
LL ++ + ++EA+ +K E+L F PD +FNI+ RGL
Sbjct: 210 LLADVQSDEVVISIFALNNLLNMMVKQNKLEEAVSLYK-ENLGSNFYPDAWTFNILIRGL 268
Query: 396 CRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPD 217
CR+GK+D AFELFNDMGSF C PD+VTYNT+I+G C+ +VD+G++LL Q++ + SPD
Sbjct: 269 CRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPD 328
Query: 216 VVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYE 37
VVTYTSVISGYCKLGKM+EASAL EMIS +P TFNVLI+GFGK+G+M SA + YE
Sbjct: 329 VVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMYE 388
Query: 36 NMLSRGCVPDVV 1
M S GC+ DVV
Sbjct: 389 QMASFGCIADVV 400
Score = 112 bits (279), Expect = 2e-22
Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 40/283 (14%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N L++ LC+ G + A +L D G FPD ++ +++ + ++D +LL Q
Sbjct: 260 TFNILIRGLCRVGKVDQAFELFNDMGSFGCFPDIVTYNTIINGLCKVNEVDRGHKLLNQV 319
Query: 561 -CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
+DEA F E + G P +FN++ G ++G
Sbjct: 320 QSRDDCSPDVVTYTSVISGYCKLGKMDEASALFH-EMISSGTVPTVVTFNVLIDGFGKVG 378
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTY 205
+ A ++ M SF C DVVT+ +LIDG+CR DV++ +L ++ + LSP+V T+
Sbjct: 379 DMVSAKSMYEQMASFGCIADVVTFTSLIDGYCRIGDVNQSLQLWNTMKGRD-LSPNVYTF 437
Query: 204 T-----------------------------------SVISGYCKLGKMEEASALLDEMIS 130
VI G+CK G ++EA+ ++ EM
Sbjct: 438 AITINALCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANLIVAEMEE 497
Query: 129 KRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
K+ P+ TF +LI G G M A++ + MLS GC PD V
Sbjct: 498 KQCHPDKVTFTILIIGHCMKGRMFEAISIFNKMLSVGCTPDDV 540
Score = 76.3 bits (186), Expect = 1e-11
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 41/264 (15%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGLHESASKLVF-----DGHFPDGPVFDFLVSSCAQSGKLDIAKRLL 571
+ +YN ++ LC+ + KL+ D PD + ++S + GK+D A L
Sbjct: 293 IVTYNTIINGLCKVNEVDRGHKLLNQVQSRDDCSPDVVTYTSVISGYCKLGKMDEASALF 352
Query: 570 VQACH-GKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLC 394
+ G + V + ++ G D +F + G C
Sbjct: 353 HEMISSGTVPTVVTFNVLIDGFGKVGDMVSAKSMY--EQMASFGCIADVVTFTSLIDGYC 410
Query: 393 RLGKIDLAFELFNDMGSFDCSPDVVTY--------------------------------- 313
R+G ++ + +L+N M D SP+V T+
Sbjct: 411 RIGDVNQSLQLWNTMKGRDLSPNVYTFAITINALCKENRLHEARGFLRELQCRNIVPKPF 470
Query: 312 --NTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDE 139
N +IDGFC+A ++D+ ++ ++ K PD VT+T +I G+C G+M EA ++ ++
Sbjct: 471 IFNPVIDGFCKAGNLDEANLIVAEMEEKQ-CHPDKVTFTILIIGHCMKGRMFEAISIFNK 529
Query: 138 MISKRIMPNSFTFNVLINGFGKIG 67
M+S P+ T N LI+ K G
Sbjct: 530 MLSVGCTPDDVTVNSLISCLLKAG 553
>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Citrus sinensis]
gi|568841566|ref|XP_006474729.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Citrus sinensis]
Length = 595
Score = 248 bits (632), Expect = 2e-63
Identities = 131/254 (51%), Positives = 173/254 (68%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
LNH K+YN +++SLC+ GLH+S ++VFD GH P+ P+ +F VSSC ++GK D A
Sbjct: 152 LNHSFKTYNLVMRSLCEMGLHDSV-QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
K LL Q G++ + DEA+ FK E+ RL PDT +FNI+ +
Sbjct: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK-EYFRLYSQPDTWTFNILIQ 269
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GL R+G++ AFE F DMGSF CSPD+VTYNTLI G CR +V +G+ELL +++ K+ S
Sbjct: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDVVTYTSVISGYCKLGKM++A+ + +EM S I P++ TFNVLI+GFGK+GNM SA
Sbjct: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
Query: 42 YENMLSRGCVPDVV 1
E MLS G +PDVV
Sbjct: 390 RERMLSFGYLPDVV 403
Score = 108 bits (270), Expect = 2e-21
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
Frame = -1
Query: 735 VKSYNFLVKSLCQ----AGLHESASKLVFDGHF-PDGPVFDFLVSSCAQSGKLDIAKRLL 571
+ +YN L+ LC+ A HE ++ F F PD + ++S + GK+D A +
Sbjct: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
+ IK + A + ++ L G+ PD +F+ + G CR
Sbjct: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE-YMRERMLSFGYLPDVVTFSSLIDGYCR 414
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVV 211
G+++ +L ++M + SP+V T+ LI+ C+ ++ L Q++ L P
Sbjct: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK-WNDLVPKPF 473
Query: 210 TYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
Y VI G+CK G ++EA+ ++ EM KR P+ TF +LI G G M A++ + M
Sbjct: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
Query: 30 LSRGCVPD 7
L+ GC PD
Sbjct: 534 LTIGCAPD 541
Score = 99.0 bits (245), Expect = 2e-18
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Frame = -1
Query: 465 KDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCR 286
K+ + F PD ++ V G C+LGK+D A ++N+M S P VT+N LIDGF +
Sbjct: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
Query: 285 AKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSF 106
++ E + + G PDVVT++S+I GYC+ G++ + L DEM K + PN +
Sbjct: 380 VGNMVSA-EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
Query: 105 TFNVLIN-----------------------------------GFGKIGNMRSAVATYENM 31
TF +LIN GF K GN+ A M
Sbjct: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
Query: 30 LSRGCVPDVV 1
+ C PD V
Sbjct: 499 EEKRCKPDKV 508
>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Fragaria vesca subsp. vesca]
Length = 583
Score = 239 bits (609), Expect = 1e-60
Identities = 125/254 (49%), Positives = 173/254 (68%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH V +Y++L++SLCQ GL +SA KLVFD G P+ V +FLVSSCAQ G+ D+A
Sbjct: 141 VNHGVWTYHYLLRSLCQMGLQDSA-KLVFDYMRTDGLSPNESVLEFLVSSCAQMGRSDLA 199
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
+++L + + + VDEA+C F+ +++ CPD+ +FNI+ R
Sbjct: 200 EKILDEVHCSVVGLSSFVYNNLFNVLVKLNRVDEAVCLFR-KYVGSYCCPDSWTFNILIR 258
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR G +D E F+DM SF CSP+VVTYNTLI G CRA +VD+G +LL +++ ++ LS
Sbjct: 259 GLCRTGAVDKGLEFFSDMRSFGCSPNVVTYNTLISGLCRAHEVDRGCDLLREVQFRSELS 318
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDV+T+TSVISGYCKLG+MEEASA+ DEMI + P + TFN LI+G+GK G+M SA +
Sbjct: 319 PDVITFTSVISGYCKLGRMEEASAIFDEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSL 378
Query: 42 YENMLSRGCVPDVV 1
YE+ML G DV+
Sbjct: 379 YESMLFHGHCADVI 392
Score = 104 bits (260), Expect = 3e-20
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 5/250 (2%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGLHESASKLVFDGHF-----PDGPVFDFLVSSCAQSGKLDIAKRLL 571
V +YN L+ LC+A + L+ + F PD F ++S + G+++ A +
Sbjct: 285 VVTYNTLISGLCRAHEVDRGCDLLREVQFRSELSPDVITFTSVISGYCKLGRMEEASAIF 344
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
+ +K + A + + L G C D +F + G CR
Sbjct: 345 DEMIGCGLKPTAVTFNALIDGYGKAGDMSSAFSLY-ESMLFHGHCADVITFTSLIDGYCR 403
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVV 211
G ++ +L+++M + + SP T++ LI+ C+ + + +LL +++ + + P
Sbjct: 404 AGHLNHGLQLWHEMNAKNVSPSAYTFSVLINALCKGNRLCEARDLLRELKG-SNVVPKSF 462
Query: 210 TYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
Y VI G CK G ++EA+ ++ EM K+ P+ TF +LI G G M A+ + M
Sbjct: 463 LYNPVIDGLCKAGNIDEANLIVAEMEEKKCTPDRVTFTILILGNSMKGRMSEAIGNFSKM 522
Query: 30 LSRGCVPDVV 1
LS GC PD +
Sbjct: 523 LSIGCAPDKI 532
Score = 61.2 bits (147), Expect = 4e-07
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Frame = -1
Query: 471 FFKDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGF 292
FF+ L +++ + R LC++G D A +F+ M + SP+ L+
Sbjct: 131 FFELSKFSLNVNHGVWTYHYLLRSLCQMGLQDSAKLVFDYMRTDGLSPNESVLEFLVSSC 190
Query: 291 CRAKDVDKGYELLTQIR-PKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMP 115
+ D ++L ++ GLS V Y ++ + KL +++EA L + + P
Sbjct: 191 AQMGRSDLAEKILDEVHCSVVGLSSFV--YNNLFNVLVKLNRVDEAVCLFRKYVGSYCCP 248
Query: 114 NSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
+S+TFN+LI G + G + + + +M S GC P+VV
Sbjct: 249 DSWTFNILIRGLCRTGAVDKGLEFFSDMRSFGCSPNVV 286
>gb|EYU18527.1| hypothetical protein MIMGU_mgv1a003955mg [Mimulus guttatus]
Length = 552
Score = 236 bits (602), Expect = 7e-60
Identities = 135/265 (50%), Positives = 172/265 (64%), Gaps = 10/265 (3%)
Frame = -1
Query: 765 RLNGDELNHLVKSYNFLVKSLCQAGLHESASKLVF-----DGHFPDGPVFDFLVSSCAQS 601
RLN L HL +++ L++SLCQ G H+SA +LV+ DG PD V DF+VSS A +
Sbjct: 102 RLN---LIHLEPTFDLLLRSLCQMGRHDSA-ELVYQYMKSDGFLPDSSVLDFVVSSFANA 157
Query: 600 GKLDIAKRLLV---QACHGKIKXXXXXXXXXXXXXXXN-SWVDEAICFFKDEHLRL-GFC 436
GK IA+ +L+ + C+ K + N + +D+A+ FFK LRL FC
Sbjct: 158 GKFRIAEEILIARAEYCNEKDELVSSFVYNNFLSMLTNKNRIDDAVLFFKSHILRLKSFC 217
Query: 435 PDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYEL 256
PDTCSFNIV RGLCR K+D AFE F+ M SF CSPD+VTYNTLI+G CR VD+ EL
Sbjct: 218 PDTCSFNIVMRGLCRASKVDKAFEFFDVMRSFSCSPDLVTYNTLINGLCRVGKVDRAEEL 277
Query: 255 LTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFG 76
L +I+ ++ S DVVTYTSVISGYCKLGK + A+ L +EMI+ I PN FTFN +I+GFG
Sbjct: 278 LREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEEMINNGIRPNLFTFNAIIDGFG 337
Query: 75 KIGNMRSAVATYENMLSRGCVPDVV 1
K G + SA YE M + G PDVV
Sbjct: 338 KKGEVASASKMYERMTATGFRPDVV 362
Score = 115 bits (289), Expect = 1e-23
Identities = 73/246 (29%), Positives = 113/246 (45%), Gaps = 5/246 (2%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKL-----VFDGHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQ 565
+YN L+ LC+ G + A +L V D + ++S + GK D A L +
Sbjct: 257 TYNTLINGLCRVGKVDRAEELLREIKVQSEFSADVVTYTSVISGYCKLGKTDAAAFLFEE 316
Query: 564 ACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
+ I+ V A + + GF PD +F + G CR G
Sbjct: 317 MINNGIRPNLFTFNAIIDGFGKKGEVASASKMY-ERMTATGFRPDVVTFTSLIDGHCRCG 375
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTY 205
+ L N+M SP+V T++ LI C+ +++ +LL Q++ + + P Y
Sbjct: 376 DLGQGIHLLNEMNEKRVSPNVFTFSVLISALCKENRLNEARDLLNQLKWREDIVPPPFVY 435
Query: 204 TSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLS 25
VI GYCK G ++EA+A++ EM +K + + TF +LI G G M A+ Y MLS
Sbjct: 436 NPVIDGYCKAGNVDEANAIVAEMEAKGCVHDKMTFTILILGHCMKGRMFEAIGMYNKMLS 495
Query: 24 RGCVPD 7
GCVPD
Sbjct: 496 VGCVPD 501
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 231 bits (589), Expect = 2e-58
Identities = 124/260 (47%), Positives = 165/260 (63%), Gaps = 4/260 (1%)
Frame = -1
Query: 768 CRLNGDELNHLVKSYNFLVKSLCQAGLHESASKLV----FDGHFPDGPVFDFLVSSCAQS 601
CRLN L H +Y L++SLCQ GLH+ ++ DGH D V FLV+S AQ+
Sbjct: 83 CRLNFS-LIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQA 141
Query: 600 GKLDIAKRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCS 421
GK D+AK+L+++ + + V EAI FK E+L P+T +
Sbjct: 142 GKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFK-ENLAFHSPPNTWT 200
Query: 420 FNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIR 241
FNI+ RGLCR+G+++ FELFN M SF C PDVVTYNTLI G C+A ++D+ +LL +++
Sbjct: 201 FNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQ 260
Query: 240 PKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNM 61
+ SPDV+TYTS+ISG+ KLGK+E AS L +EMI I P TFNVLI+GFGKIGNM
Sbjct: 261 SRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNM 320
Query: 60 RSAVATYENMLSRGCVPDVV 1
+A A +E M S C+PDVV
Sbjct: 321 VAAEAMHEKMASYSCIPDVV 340
Score = 111 bits (277), Expect = 3e-22
Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 4/247 (1%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N L++ LC+ G E +L G PD ++ L+S ++ +LD A LL +
Sbjct: 200 TFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEV 259
Query: 561 CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLGK 382
EA +E +R G P +FN++ G ++G
Sbjct: 260 QSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGN 319
Query: 381 IDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTYT 202
+ A + M S+ C PDVVT+ +LIDG+CR D+ G ++ ++ + +SP++ TY+
Sbjct: 320 MVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKAR-NVSPNIYTYS 378
Query: 201 SVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLSR 22
+I+ CK ++ EA LL ++ + P F +N +I+GF K GN+ A M +
Sbjct: 379 VIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEK 438
Query: 21 GCVPDVV 1
C PD V
Sbjct: 439 RCRPDKV 445
Score = 72.8 bits (177), Expect = 1e-10
Identities = 39/128 (30%), Positives = 69/128 (53%)
Frame = -1
Query: 435 PDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYEL 256
P+ +++++ LC+ +I A +L + D P YN +IDGFC+A +VD+ +
Sbjct: 372 PNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVI 431
Query: 255 LTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFG 76
+T++ K PD VT+T +I G+C G+M EA + +M++ P++ T + L+
Sbjct: 432 VTEMEEKR-CRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLL 490
Query: 75 KIGNMRSA 52
K G A
Sbjct: 491 KAGKPSEA 498
>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
Length = 570
Score = 230 bits (587), Expect = 4e-58
Identities = 125/254 (49%), Positives = 162/254 (63%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH +YN L++SLCQ G H+SA K VFD GH PD +FLV A+ GKLD
Sbjct: 133 VNHSFSTYNLLIRSLCQMGFHDSA-KFVFDCMRIDGHSPDNSTIEFLVCVFAKVGKLDSC 191
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
++LL + I+ N+ V EA+C F+ + + F PDT +FNI+
Sbjct: 192 EKLLEE-----IRASKFVYSSLFNVLVKNNKVYEAVCLFRKQ-IGSHFVPDTWTFNILIG 245
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLC +G++ AFE FNDMG F CSPDVVTYNTLI G CR +VD+G +LL +++ + S
Sbjct: 246 GLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNEVDRGCDLLREVQLRGDFS 305
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
P+V T+TSVI GYCKLG+MEEASAL DEM+ P + TFNVLI+ F K+G+M SA+A
Sbjct: 306 PNVRTFTSVILGYCKLGRMEEASALFDEMMDSGTRPTTVTFNVLIDAFSKVGDMASAIAL 365
Query: 42 YENMLSRGCVPDVV 1
YE ML G PDVV
Sbjct: 366 YEKMLFHGYRPDVV 379
Score = 100 bits (249), Expect = 6e-19
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 39/282 (13%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD-GHF---PDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N L+ LC G SA + D G F PD ++ L+S ++ ++D LL +
Sbjct: 239 TFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVVTYNTLISGLCRTNEVDRGCDLLREV 298
Query: 561 -CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
G ++EA F DE + G P T +FN++ ++G
Sbjct: 299 QLRGDFSPNVRTFTSVILGYCKLGRMEEASALF-DEMMDSGTRPTTVTFNVLIDAFSKVG 357
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPK---------- 235
+ A L+ M PDVVT+ +LIDG+CR +++G +L ++ +
Sbjct: 358 DMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKLWCEMSVRNVSPNGYTYS 417
Query: 234 ------------------------TGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISK 127
T + P Y VI G+CK G ++EA+ ++ EM K
Sbjct: 418 VVIHALCKVNRLHEARDLLRQLNCTNIVPKPFMYNPVIDGFCKAGNVDEANMIVAEMEEK 477
Query: 126 RIMPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
R P+ TF +LI G G M A+ + ML+ GC PD +
Sbjct: 478 RCNPDKMTFTILILGNCMKGRMVDAIGVFYKMLAVGCAPDKI 519
Score = 70.9 bits (172), Expect = 5e-10
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Frame = -1
Query: 765 RLNGDELNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQS 601
+L GD + V+++ ++ C+ G E AS L FD G P F+ L+ + ++
Sbjct: 299 QLRGD-FSPNVRTFTSVILGYCKLGRMEEASAL-FDEMMDSGTRPTTVTFNVLIDAFSKV 356
Query: 600 GKLDIAKRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCS 421
G + A L + + ++ + + + +R P+ +
Sbjct: 357 GDMASAIALYEKMLFHGYRPDVVTFTSLIDGYCRVGQLNRGLKLWCEMSVR-NVSPNGYT 415
Query: 420 FNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIR 241
+++V LC++ ++ A +L + + P YN +IDGFC+A +VD+ ++ ++
Sbjct: 416 YSVVIHALCKVNRLHEARDLLRQLNCTNIVPKPFMYNPVIDGFCKAGNVDEANMIVAEME 475
Query: 240 PKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNM 61
K +PD +T+T +I G C G+M +A + +M++ P+ T + L++ K G
Sbjct: 476 EKR-CNPDKMTFTILILGNCMKGRMVDAIGVFYKMLAVGCAPDKITVHCLMSCLLKAGMP 534
Query: 60 RSAVATYENML 28
A E ++
Sbjct: 535 NEAFHIKETVM 545
Score = 69.7 bits (169), Expect = 1e-09
Identities = 47/157 (29%), Positives = 75/157 (47%)
Frame = -1
Query: 471 FFKDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGF 292
FF+ L ++N++ R LC++G D A +F+ M SPD T L+ F
Sbjct: 123 FFELSRANLSVNHSFSTYNLLIRSLCQMGFHDSAKFVFDCMRIDGHSPDNSTIEFLVCVF 182
Query: 291 CRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPN 112
+ +D +LL +IR Y+S+ + K K+ EA L + I +P+
Sbjct: 183 AKVGKLDSCEKLLEEIRASK------FVYSSLFNVLVKNNKVYEAVCLFRKQIGSHFVPD 236
Query: 111 SFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
++TFN+LI G +G + SA + +M C PDVV
Sbjct: 237 TWTFNILIGGLCGVGEVHSAFEFFNDMGKFRCSPDVV 273
>ref|XP_007204825.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
gi|462400356|gb|EMJ06024.1| hypothetical protein
PRUPE_ppa004064mg [Prunus persica]
Length = 532
Score = 229 bits (585), Expect = 6e-58
Identities = 130/254 (51%), Positives = 159/254 (62%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH V +YNFL++SLCQ GL +SA KLVFD GH PD + + LVSS AQ GKL+ A
Sbjct: 152 VNHSVWTYNFLLRSLCQIGLQDSA-KLVFDYMRSDGHTPDDSIAELLVSSYAQMGKLNNA 210
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
++LL DE C D+ +FNI+ R
Sbjct: 211 EKLL----------------------------DEVHC-------------DSWTFNILIR 229
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR+G+ID AFE F+DM SF C PD+VTYNTLI G CRA +VD+G LL +++ + LS
Sbjct: 230 GLCRIGEIDKAFEFFSDMESFGCYPDIVTYNTLISGLCRANEVDRGCHLLKEVQSRIELS 289
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDV+T+TSVISGYCKLGKMEEAS L DEM + + P S TFN LI+GFGK GNM SA A
Sbjct: 290 PDVITFTSVISGYCKLGKMEEASVLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISARAM 349
Query: 42 YENMLSRGCVPDVV 1
YE ML G PDV+
Sbjct: 350 YEKMLFHGYRPDVI 363
Score = 79.0 bits (193), Expect = 2e-12
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 20/243 (8%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAG--------LHESASKLVFDGHFPDGPVFDFLVSSCAQSGKLDIAK 580
+ +YN L+ LC+A L E S++ PD F ++S + GK++ A
Sbjct: 256 IVTYNTLISGLCRANEVDRGCHLLKEVQSRIELS---PDVITFTSVISGYCKLGKMEEAS 312
Query: 579 RLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRG 400
L + + + + + A + ++ L G+ PD +F + G
Sbjct: 313 VLFDEMNNSGVGPTSVTFNALIDGFGKSGNMISARAMY-EKMLFHGYRPDVITFTSLIDG 371
Query: 399 LCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLID------------GFCRAKDVDKGYEL 256
CR GK+ +L+ +M + + SP T++ LI+ GFC+A +VD+ +
Sbjct: 372 YCRAGKLSQGLKLWQEMNAKNVSPSAYTFSVLINALCRENRLQEAHGFCKAGNVDEANLI 431
Query: 255 LTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFG 76
+ ++ K SPD VT+T +I G C G+M EA + +M++ P++ T + LI+
Sbjct: 432 VAEMEEKR-CSPDKVTFTILILGNCMKGRMSEAISNFKKMLAIGCAPDNITVDSLISCLM 490
Query: 75 KIG 67
K G
Sbjct: 491 KAG 493
>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336330|gb|ERP59419.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 511
Score = 225 bits (574), Expect = 1e-56
Identities = 121/254 (47%), Positives = 161/254 (63%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH +YN L++SLCQ G H+ + +VFD GH PD + FLV+ AQ+ D+
Sbjct: 69 VNHCYSTYNLLMRSLCQMGHHDLVN-IVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
K+LL + +++ + V EAI FK E+L + PDT +FNI+ R
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFK-EYLAMQ-SPDTWTFNILIR 185
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR+G +D AFE+F DM SF C PDVVTYNTLI+G C+A +V +G EL +I+ ++ S
Sbjct: 186 GLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCS 245
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PD+VTYTS+ISG+CK GKM+EAS L +EM+ I PN TFNVLI+GFGKIGN+ A A
Sbjct: 246 PDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAM 305
Query: 42 YENMLSRGCVPDVV 1
Y M C DVV
Sbjct: 306 YRKMAYFDCSADVV 319
Score = 108 bits (271), Expect = 2e-21
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 5/248 (2%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N L++ LC+ G + A ++ D G PD ++ L++ ++ ++ L +
Sbjct: 179 TFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEI 238
Query: 561 -CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
+ + EA F +E +R G P+ +FN++ G ++G
Sbjct: 239 QSRSDCSPDIVTYTSIISGFCKSGKMKEASNLF-EEMMRSGIQPNVITFNVLIDGFGKIG 297
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTY 205
I A ++ M FDCS DVVT+ +LIDG+CRA V+ G + ++ + +SP V TY
Sbjct: 298 NIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTR-NVSPTVYTY 356
Query: 204 TSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLS 25
+I+ CK ++ EA L ++ + I+P F +N +I+GF K GN+ + M
Sbjct: 357 AVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEE 416
Query: 24 RGCVPDVV 1
+ C PD V
Sbjct: 417 KRCDPDKV 424
Score = 79.3 bits (194), Expect = 1e-12
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 4/227 (1%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLV 568
+ +Y ++ C++G + AS L + G P+ F+ L+ + G + A+ +
Sbjct: 248 IVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYR 307
Query: 567 QACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRL 388
+ + V+ + F+ R P ++ ++ LC+
Sbjct: 308 KMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTR-NVSPTVYTYAVLINALCKE 366
Query: 387 GKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVT 208
+++ A + + + P YN +IDGFC+A +VD+G +L ++ K PD VT
Sbjct: 367 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKR-CDPDKVT 425
Query: 207 YTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIG 67
+T +I G+C G+M EA + + M++ R P++ T N LI+ K G
Sbjct: 426 FTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAG 472
>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Solanum lycopersicum]
Length = 550
Score = 224 bits (572), Expect = 2e-56
Identities = 129/259 (49%), Positives = 165/259 (63%), Gaps = 10/259 (3%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVF-----DGHFPDGPVFDFLVSSCAQSGKLDIA 583
L H + S+N L++SL Q G H+SA LVF DG+ + + + +V + A +GK +IA
Sbjct: 100 LIHCIGSFNLLLRSLSQMGFHDSAM-LVFKYMKADGYLLENSILESVVLALANAGKFEIA 158
Query: 582 KRLLV-QACHGKIKXXXXXXXXXXXXXXXN---SWVDEAICFFKDEHLRLG-FCPDTCSF 418
K +L+ QA G+ + S VDEA+ FFK LR PDTC+F
Sbjct: 159 KEILISQAELGREEGSIVRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTF 218
Query: 417 NIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRP 238
N V RGLCR+G +D AFE FNDMGSF CSPD VTYNTLI+G C V++ LL ++
Sbjct: 219 NTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNLQL 278
Query: 237 KTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMR 58
+ GLSPDVVTYTS+ISGYCKL +M+EA L+DEMI+ I PN TFN+LINGFGKIG+M
Sbjct: 279 QDGLSPDVVTYTSLISGYCKLSRMDEAINLMDEMITYGISPNLVTFNILINGFGKIGDMF 338
Query: 57 SAVATYENMLSRGCVPDVV 1
SA+ Y M + G PDVV
Sbjct: 339 SAIKMYGKMCAVGYPPDVV 357
Score = 115 bits (288), Expect = 2e-23
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 5/246 (2%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVF-----DGHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQ 565
+YN L+ LC G A L+ DG PD + L+S + ++D A L+ +
Sbjct: 252 TYNTLINGLCAVGQVNRAQGLLGNLQLQDGLSPDVVTYTSLISGYCKLSRMDEAINLMDE 311
Query: 564 ACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
I + AI + + +G+ PD +F + G CR G
Sbjct: 312 MITYGISPNLVTFNILINGFGKIGDMFSAIKMY-GKMCAVGYPPDVVTFTSLIDGYCRTG 370
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTY 205
++D +L++DM S + SP++ T++ LI + +++ ELL Q++ + + P Y
Sbjct: 371 ELDQGLKLWDDMNSRNLSPNLYTFSVLISALSKENRLNEARELLRQLKSRDDIVPQPFVY 430
Query: 204 TSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLS 25
V+ G+CK G + EA+ + EM SK + TF +LI G G M A+A ++ MLS
Sbjct: 431 NPVLDGFCKAGNLSEANVIAAEMESKGCCHDKITFTILILGHCMKGRMLEALAIFDKMLS 490
Query: 24 RGCVPD 7
GCVPD
Sbjct: 491 LGCVPD 496
Score = 108 bits (270), Expect = 2e-21
Identities = 73/250 (29%), Positives = 130/250 (52%), Gaps = 7/250 (2%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLL--V 568
++N +++ LC+ G + A + D G PD ++ L++ G+++ A+ LL +
Sbjct: 217 TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCSPDTVTYNTLINGLCAVGQVNRAQGLLGNL 276
Query: 567 QACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRL 388
Q G + S +DEAI DE + G P+ +FNI+ G ++
Sbjct: 277 QLQDG-LSPDVVTYTSLISGYCKLSRMDEAINLM-DEMITYGISPNLVTFNILINGFGKI 334
Query: 387 GKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVT 208
G + A +++ M + PDVVT+ +LIDG+CR ++D+G +L + + LSP++ T
Sbjct: 335 GDMFSAIKMYGKMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDDMNSRN-LSPNLYT 393
Query: 207 YTSVISGYCKLGKMEEASALLDEMISKR-IMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
++ +IS K ++ EA LL ++ S+ I+P F +N +++GF K GN+ A M
Sbjct: 394 FSVLISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSEANVIAAEM 453
Query: 30 LSRGCVPDVV 1
S+GC D +
Sbjct: 454 ESKGCCHDKI 463
>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Solanum tuberosum]
gi|565370447|ref|XP_006351832.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Solanum tuberosum]
Length = 550
Score = 222 bits (566), Expect = 1e-55
Identities = 127/260 (48%), Positives = 161/260 (61%), Gaps = 11/260 (4%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVF-----DGHFPDGPVFDFLVSSCAQSGKLDIA 583
L H + S+N L++SL Q G H+SA LVF DG+ + + + +V + A +GK +IA
Sbjct: 100 LVHCIGSFNLLLRSLSQMGFHDSAM-LVFKFMKADGYLLENSILESVVLALANAGKFEIA 158
Query: 582 KRLLVQACH-----GKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLG-FCPDTCS 421
K +L+ G+I S VDEA+ FFK LR PDTC+
Sbjct: 159 KEILISQAELGREEGRI-VRPFVHNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCT 217
Query: 420 FNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIR 241
FN V RGLCR+G +D AFE FNDMGSF C PD VTYNTLI+G C V++ LL +
Sbjct: 218 FNTVIRGLCRVGGVDKAFEFFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLE 277
Query: 240 PKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNM 61
+ GLSPDVVTYTSVI+GYCKLG+M+EA L+DEM + I PN TFN+LINGFGKIG+M
Sbjct: 278 LQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDM 337
Query: 60 RSAVATYENMLSRGCVPDVV 1
SA+ Y M + G PDVV
Sbjct: 338 FSAIQMYGRMCAVGYPPDVV 357
Score = 110 bits (276), Expect = 4e-22
Identities = 72/249 (28%), Positives = 127/249 (51%), Gaps = 6/249 (2%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N +++ LC+ G + A + D G FPD ++ L++ G+++ A+ LL
Sbjct: 217 TFNTVIRGLCRVGGVDKAFEFFNDMGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNL 276
Query: 561 -CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
+ +DEAI DE G P+ +FNI+ G ++G
Sbjct: 277 ELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLM-DEMTTYGISPNLVTFNILINGFGKIG 335
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTY 205
+ A +++ M + PDVVT+ +LIDG+CR ++D+G +L ++ + LSP++ T+
Sbjct: 336 DMFSAIQMYGRMCAVGYPPDVVTFTSLIDGYCRTGELDQGLKLWDEMNTRN-LSPNLYTF 394
Query: 204 TSVISGYCKLGKMEEASALLDEMISKR-IMPNSFTFNVLINGFGKIGNMRSAVATYENML 28
+ +IS K ++ EA LL ++ S+ I+P F +N +++GF K GN+ A M
Sbjct: 395 SILISALSKENRLNEARELLRQLKSRDDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEME 454
Query: 27 SRGCVPDVV 1
SRGC D +
Sbjct: 455 SRGCCHDKI 463
Score = 79.7 bits (195), Expect = 1e-12
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 41/267 (15%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVF-----DGHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQ 565
+YN L+ LC G A L+ DG PD + +++ + G++D A L+ +
Sbjct: 252 TYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLGRMDEAINLMDE 311
Query: 564 ACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
I + AI + +G+ PD +F + G CR G
Sbjct: 312 MTTYGISPNLVTFNILINGFGKIGDMFSAIQMY-GRMCAVGYPPDVVTFTSLIDGYCRTG 370
Query: 384 KIDLAFELFNDMGSFDCSPDVVT------------------------------------Y 313
++D +L+++M + + SP++ T Y
Sbjct: 371 ELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQLKSRDDIVPQPFVY 430
Query: 312 NTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMI 133
N ++DGFC+A ++ K + ++ + G D +T+T +I G+C G+M EA A+ D+M+
Sbjct: 431 NPVLDGFCKAGNLSKANVIAAEMESR-GCCHDKITFTILILGHCMKGRMLEAMAIFDKML 489
Query: 132 SKRIMPNSFTFNVLINGFGKIGNMRSA 52
S +P+ T + L + K G ++ A
Sbjct: 490 SLGCVPDDITVSCLTSCLLKAGMVKEA 516
>gb|EXB38957.1| hypothetical protein L484_027392 [Morus notabilis]
Length = 732
Score = 219 bits (557), Expect = 1e-54
Identities = 115/252 (45%), Positives = 158/252 (62%), Gaps = 5/252 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
+NH + SYN+L++SLCQ GLH+SA K VFD GH PD + +FL+ S AQ G+LD+
Sbjct: 149 VNHTLSSYNYLMRSLCQMGLHDSA-KFVFDCFKSDGHLPDSSIVEFLLCSHAQVGRLDLV 207
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
++LL + I + V EA+C F+ +H+ F P T +FNI+ +
Sbjct: 208 EKLLDELRRDGIIVSSIVYNNLLNVLVKQNKVCEAVCLFR-KHMNSRFRPSTWTFNILIQ 266
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLC + + AFE N+MG CSPD+VTYNTLI G C+ DVD+G LL +++ ++ LS
Sbjct: 267 GLCGIRDVYTAFEFLNEMGKLGCSPDIVTYNTLISGLCKTNDVDRGCNLLRELQSRSELS 326
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PD VT+TSVISGYCKLG+M EAS+L EMI+ I P + TFN LI+G K G+M SAV
Sbjct: 327 PDAVTFTSVISGYCKLGRMSEASSLFAEMINSGIKPAAATFNALIDGHAKAGDMASAVCL 386
Query: 42 YENMLSRGCVPD 7
+ ++ PD
Sbjct: 387 FRRNMTLHFQPD 398
Score = 211 bits (537), Expect = 2e-52
Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 5/250 (2%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGLHESASKLVFDGHF-----PDGPVFDFLVSSCAQSGKLDIAKRLL 571
+ +YN L+ LC+ + L+ + PD F ++S + G++ A L
Sbjct: 293 IVTYNTLISGLCKTNDVDRGCNLLRELQSRSELSPDAVTFTSVISGYCKLGRMSEASSLF 352
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
+ + IK + A+C F+ ++ L F PDT +FNI+ RGLC
Sbjct: 353 AEMINSGIKPAAATFNALIDGHAKAGDMASAVCLFR-RNMTLHFQPDTWTFNILIRGLCG 411
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVV 211
+GK+ AFE F DMG F CSPDV+TYNTLI G CR +VD+G++LL +++ K+ LSPDVV
Sbjct: 412 VGKVHTAFEFFKDMGKFGCSPDVITYNTLISGLCRNNEVDRGFDLLREVQSKSKLSPDVV 471
Query: 210 TYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENM 31
T+TSVISGYCKLG+M+EAS L DEMI+ I PN+FTFN LI+GFGK G+M SA+ + M
Sbjct: 472 TFTSVISGYCKLGQMKEASFLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITFFAKM 531
Query: 30 LSRGCVPDVV 1
L G PDVV
Sbjct: 532 LFHGYHPDVV 541
Score = 100 bits (248), Expect = 7e-19
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N L++ LC G +A + D G PD ++ L+S ++ ++D LL +
Sbjct: 401 TFNILIRGLCGVGKVHTAFEFFKDMGKFGCSPDVITYNTLISGLCRNNEVDRGFDLLREV 460
Query: 561 -CHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
K+ + EA F DE + G P+T +FN + G + G
Sbjct: 461 QSKSKLSPDVVTFTSVISGYCKLGQMKEASFLF-DEMINFGIKPNTFTFNALIDGFGKAG 519
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTY 205
+ A F M PDVV++ +LIDG+CR ++++G +L ++ ++ + P+ T+
Sbjct: 520 DMASAITFFAKMLFHGYHPDVVSFTSLIDGYCRVGNLNQGLKLWREMNERS-VRPNGYTF 578
Query: 204 TSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLS 25
+ +I C+ ++ EA L ++ I+P F +N +++GF K GN+ A M
Sbjct: 579 SVLIHALCRNNRLHEARDFLKQLSCTNIIPEPFIYNPIVDGFCKAGNVDEANMIVAGMEG 638
Query: 24 RGCVPDVV 1
+GC PD V
Sbjct: 639 KGCKPDKV 646
Score = 73.9 bits (180), Expect = 6e-11
Identities = 69/266 (25%), Positives = 106/266 (39%), Gaps = 43/266 (16%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAG--------LHESASKLVFDGHFPDGPVFDFLVSSCAQSGKLDIAK 580
V +YN L+ LC+ L E SK PD F ++S + G++ A
Sbjct: 434 VITYNTLISGLCRNNEVDRGFDLLREVQSKSKLS---PDVVTFTSVISGYCKLGQMKEAS 490
Query: 579 RLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRG 400
L + + IK + AI FF + L G+ PD SF + G
Sbjct: 491 FLFDEMINFGIKPNTFTFNALIDGFGKAGDMASAITFFA-KMLFHGYHPDVVSFTSLIDG 549
Query: 399 LCRLGKIDLAFELFNDMGSFDCSPDVVT-------------------------------- 316
CR+G ++ +L+ +M P+ T
Sbjct: 550 YCRVGNLNQGLKLWREMNERSVRPNGYTFSVLIHALCRNNRLHEARDFLKQLSCTNIIPE 609
Query: 315 ---YNTLIDGFCRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALL 145
YN ++DGFC+A +VD+ ++ + K G PD VT+T +I G C G+M EA +
Sbjct: 610 PFIYNPIVDGFCKAGNVDEANMIVAGMEGK-GCKPDKVTFTILIIGNCMKGRMLEAIGVF 668
Query: 144 DEMISKRIMPNSFTFNVLINGFGKIG 67
++M + P S T N LI+ K G
Sbjct: 669 NKMKAVGCAPESRTANCLISCLLKAG 694
Score = 62.8 bits (151), Expect = 1e-07
Identities = 43/157 (27%), Positives = 75/157 (47%)
Frame = -1
Query: 471 FFKDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGF 292
FF + L S+N + R LC++G D A +F+ S PD L+
Sbjct: 139 FFALSRVNLNVNHTLSSYNYLMRSLCQMGLHDSAKFVFDCFKSDGHLPDSSIVEFLLCSH 198
Query: 291 CRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPN 112
+ +D +LL ++R + G+ + Y ++++ K K+ EA L + ++ R P+
Sbjct: 199 AQVGRLDLVEKLLDELR-RDGIIVSSIVYNNLLNVLVKQNKVCEAVCLFRKHMNSRFRPS 257
Query: 111 SFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
++TFN+LI G I ++ +A M GC PD+V
Sbjct: 258 TWTFNILIQGLCGIRDVYTAFEFLNEMGKLGCSPDIV 294
>ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 216 bits (551), Expect = 5e-54
Identities = 113/254 (44%), Positives = 161/254 (63%), Gaps = 5/254 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
++H +YN L++SLCQAGLH SA KL++D G PD + FLVSS A + + D++
Sbjct: 104 MSHSFWTYNMLLRSLCQAGLHNSA-KLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVS 162
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
K LL +A ++ ++ +D+AIC F+ E +R C D +FNI+ R
Sbjct: 163 KELLAEAQCSGVQVDVIVYNNFLNILIKHNRLDDAICLFR-ELMRSHSCLDAFTFNILIR 221
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLC G +D AFEL DMGSF CSPD+VTYN L+ G CR VD+ +LL ++ K +
Sbjct: 222 GLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFA 281
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
P+VV+YT+VISGYC+L KM+EAS+L EM+ PN FTF+ L++GF K G+M SA+
Sbjct: 282 PNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGM 341
Query: 42 YENMLSRGCVPDVV 1
++ +L GC P+V+
Sbjct: 342 HKKILFHGCAPNVI 355
Score = 97.1 bits (240), Expect = 6e-18
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Frame = -1
Query: 729 SYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQA 562
++N L++ LC AG + A +L+ D G PD ++ L+ + ++D A+ LL +
Sbjct: 215 TFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEV 274
Query: 561 C-HGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLG 385
C + S +DEA F E +R G P+ +F+ + G + G
Sbjct: 275 CLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFY-EMVRSGTKPNVFTFSALVDGFVKAG 333
Query: 384 KIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYEL----------------- 256
+ A + + C+P+V+T +LI+G+CRA V+ G +L
Sbjct: 334 DMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYS 393
Query: 255 -----------------LTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISK 127
L +I ++ + P Y VI GYCK G ++EA+A++ EM +
Sbjct: 394 VLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEM-EE 452
Query: 126 RIMPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPD 7
+ P+ TF +LI G G A+ + ML+ GC PD
Sbjct: 453 KCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPD 492
Score = 71.2 bits (173), Expect = 4e-10
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 8/243 (3%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIA----K 580
V SY ++ C+ + AS L ++ G P+ F LV ++G + A K
Sbjct: 284 VVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHK 343
Query: 579 RLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRG 400
++L C + WV+ + +++ + R + +++++
Sbjct: 344 KILFHGCAPNV----ITLTSLINGYCRAGWVNHGLDLWREMNAR-NIPANLYTYSVLISA 398
Query: 399 LCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSP 220
LC+ ++ A L + D P YN +IDG+C++ ++D+ ++ ++ K P
Sbjct: 399 LCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEEKC--KP 456
Query: 219 DVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATY 40
D +T+T +I G+C G+ EA + +M++ P+ T L + K G A
Sbjct: 457 DKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIK 516
Query: 39 ENM 31
E +
Sbjct: 517 ETL 519
>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
gi|565479514|ref|XP_006297397.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566105|gb|EOA30294.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
gi|482566106|gb|EOA30295.1| hypothetical protein
CARUB_v10013421mg [Capsella rubella]
Length = 535
Score = 216 bits (549), Expect = 9e-54
Identities = 115/253 (45%), Positives = 157/253 (62%), Gaps = 4/253 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLV----FDGHFPDGPVFDFLVSSCAQSGKLDIAK 580
+ H +YN L +SLC+AG+H+ A ++ DG P+ + FLVSS A+ GKL A
Sbjct: 100 IRHSFWTYNVLTRSLCKAGMHDLAGQMFECMRSDGVSPNSRLLGFLVSSFAEKGKLQFAT 159
Query: 579 RLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRG 400
LL+Q+ +++ VD+A+ F D+HLR C DT +FNI+ RG
Sbjct: 160 ALLLQSY--EVERCCMVVNSLLNTLVKLDRVDDAMKLF-DKHLRFQCCNDTKTFNILIRG 216
Query: 399 LCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSP 220
LC +GK + A EL +M F CSPD+VTYNTLI GFC++ ++ K E+L ++ +G SP
Sbjct: 217 LCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLNDVKSSSGCSP 276
Query: 219 DVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVATY 40
DVVTYTS+ISGYCK GKM+EA LLD+M+ I P + TFNVL++G+ K G M SA
Sbjct: 277 DVVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIR 336
Query: 39 ENMLSRGCVPDVV 1
M+S GC PDVV
Sbjct: 337 GKMISFGCFPDVV 349
Score = 120 bits (302), Expect = 4e-25
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 40/284 (14%)
Frame = -1
Query: 732 KSYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLL-- 571
K++N L++ LC G E A +L+ + G PD ++ L+ +S +L A +L
Sbjct: 208 KTFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKANEMLND 267
Query: 570 VQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCR 391
V++ G + EA D+ L LG P T +FN++ G +
Sbjct: 268 VKSSSG-CSPDVVTYTSMISGYCKAGKMQEAYLLL-DDMLGLGIYPTTITFNVLVDGYAK 325
Query: 390 LGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGL----- 226
G++ A ++ M SF C PDVVT+ +LIDG+CRA V++G+ L ++ K L
Sbjct: 326 AGEMTSAEDIRGKMISFGCFPDVVTFTSLIDGYCRAGQVNQGFRLWEEMNAKGMLPNEFT 385
Query: 225 -------------------------SPDVVT----YTSVISGYCKLGKMEEASALLDEMI 133
S D++T Y VI G+CK GK+ EA+ +++EM
Sbjct: 386 YSILINALCKENSLLKARELLGQLASKDIITKPFMYNPVIDGFCKAGKVNEANVIVEEME 445
Query: 132 SKRIMPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
K+ P+ TF +LI G G M AV+ + M++ GC PD +
Sbjct: 446 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKI 489
Score = 80.1 bits (196), Expect = 8e-13
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 8/236 (3%)
Frame = -1
Query: 735 VKSYNFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKL----DIAK 580
V +Y ++ C+AG + A L+ D G +P F+ LV A++G++ DI
Sbjct: 278 VVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAEDIRG 337
Query: 579 RLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRG 400
+++ C + V++ +++ + + G P+ +++I+
Sbjct: 338 KMISFGCFPDV----VTFTSLIDGYCRAGQVNQGFRLWEEMNAK-GMLPNEFTYSILINA 392
Query: 399 LCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLSP 220
LC+ + A EL + S D YN +IDGFC+A V++ ++ ++ K P
Sbjct: 393 LCKENSLLKARELLGQLASKDIITKPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK-CKP 451
Query: 219 DVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSA 52
D +T+T +I G+C G+M EA ++ +M++ P+ T N L++ K G A
Sbjct: 452 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVNSLLSCLLKAGMAEEA 507
Score = 63.2 bits (152), Expect = 1e-07
Identities = 41/157 (26%), Positives = 72/157 (45%)
Frame = -1
Query: 471 FFKDEHLRLGFCPDTCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGF 292
F++ +L ++N++TR LC+ G DLA ++F M S SP+ L+ F
Sbjct: 90 FWEFSRFKLNIRHSFWTYNVLTRSLCKAGMHDLAGQMFECMRSDGVSPNSRLLGFLVSSF 149
Query: 291 CRAKDVDKGYELLTQIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPN 112
+ LL Q + + S+++ KL ++++A L D+ + + +
Sbjct: 150 AEKGKLQFATALLLQ---SYEVERCCMVVNSLLNTLVKLDRVDDAMKLFDKHLRFQCCND 206
Query: 111 SFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
+ TFN+LI G +G A+ M GC PD+V
Sbjct: 207 TKTFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIV 243
>ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Glycine max]
Length = 581
Score = 214 bits (544), Expect = 4e-53
Identities = 114/253 (45%), Positives = 159/253 (62%), Gaps = 5/253 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
++H +Y+ L++SLC++ LH +A K+V+D G PD + FLVSS A G+LD++
Sbjct: 68 MSHSYLTYSLLLRSLCRSNLHHTA-KVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVS 126
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
+ LL + + V +A+ F+ E +RL + P T + NI+ R
Sbjct: 127 RELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFR-ELIRLRYKPVTYTVNILIR 185
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR+G+ID AF+L D+ SF C PDV+TYNTLI G C +VD+ LL ++ +
Sbjct: 186 GLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFA 245
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDVV+YT +ISGYCKL KMEE S L DEMI+ PN+FTFN LI+GFGK+G+M SA+A
Sbjct: 246 PDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALAL 305
Query: 42 YENMLSRGCVPDV 4
Y ML +GC+PDV
Sbjct: 306 YSKMLVQGCLPDV 318
Score = 104 bits (259), Expect = 4e-20
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Frame = -1
Query: 723 NFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQAC- 559
N L++ LC+ G + A KL+ D G PD ++ L+ ++D A+ LL + C
Sbjct: 181 NILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCL 240
Query: 558 HGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLGKI 379
+G+ ++E F DE + G P+T +FN + G +LG +
Sbjct: 241 NGEFAPDVVSYTMIISGYCKLRKMEEGSLLF-DEMINSGTAPNTFTFNALIDGFGKLGDM 299
Query: 378 DLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPK------------ 235
A L++ M C PDV T+ +LI+G R + V + ++ ++ K
Sbjct: 300 ASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVL 359
Query: 234 ----------------------TGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRI 121
+ + P Y VI GYCK G ++EA+ ++ EM R
Sbjct: 360 VSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRC 419
Query: 120 MPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
P+ TF +LI G G M A+ ++ ML+ GC PD +
Sbjct: 420 KPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEI 459
Score = 71.6 bits (174), Expect = 3e-10
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Frame = -1
Query: 762 LNGDELNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSG 598
LNG+ +V SY ++ C+ E S L+FD G P+ F+ L+ + G
Sbjct: 240 LNGEFAPDVV-SYTMIISGYCKLRKMEEGS-LLFDEMINSGTAPNTFTFNALIDGFGKLG 297
Query: 597 KLDIA----KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPD 430
+ A ++LVQ C + + +D + K +G
Sbjct: 298 DMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMD---MWHKMNEKNIG--AS 352
Query: 429 TCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLT 250
+++++ GLC ++ A ++ + D P YN +IDG+C++ +VD+ +++
Sbjct: 353 LYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVA 412
Query: 249 QIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKI 70
++ PD +T+T +I G+C G+M EA D+M++ P+ T N L + K
Sbjct: 413 EMEVNR-CKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKA 471
Query: 69 G 67
G
Sbjct: 472 G 472
Score = 56.6 bits (135), Expect = 9e-06
Identities = 35/141 (24%), Positives = 67/141 (47%)
Frame = -1
Query: 423 SFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQI 244
+++++ R LCR A +++ M PD L+ + +D ELL +
Sbjct: 74 TYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELLADV 133
Query: 243 RPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGN 64
+ + + V Y + + + K+ +A L E+I R P ++T N+LI G ++G
Sbjct: 134 QCNN-VGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGE 192
Query: 63 MRSAVATYENMLSRGCVPDVV 1
+ A +++ S GC+PDV+
Sbjct: 193 IDEAFKLLKDLRSFGCLPDVI 213
>ref|XP_006581143.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Glycine max]
Length = 598
Score = 214 bits (544), Expect = 4e-53
Identities = 114/253 (45%), Positives = 159/253 (62%), Gaps = 5/253 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
++H +Y+ L++SLC++ LH +A K+V+D G PD + FLVSS A G+LD++
Sbjct: 68 MSHSYLTYSLLLRSLCRSNLHHTA-KVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVS 126
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
+ LL + + V +A+ F+ E +RL + P T + NI+ R
Sbjct: 127 RELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFR-ELIRLRYKPVTYTVNILIR 185
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR+G+ID AF+L D+ SF C PDV+TYNTLI G C +VD+ LL ++ +
Sbjct: 186 GLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCLNGEFA 245
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDVV+YT +ISGYCKL KMEE S L DEMI+ PN+FTFN LI+GFGK+G+M SA+A
Sbjct: 246 PDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALAL 305
Query: 42 YENMLSRGCVPDV 4
Y ML +GC+PDV
Sbjct: 306 YSKMLVQGCLPDV 318
Score = 104 bits (259), Expect = 4e-20
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Frame = -1
Query: 723 NFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQAC- 559
N L++ LC+ G + A KL+ D G PD ++ L+ ++D A+ LL + C
Sbjct: 181 NILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLREVCL 240
Query: 558 HGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLGKI 379
+G+ ++E F DE + G P+T +FN + G +LG +
Sbjct: 241 NGEFAPDVVSYTMIISGYCKLRKMEEGSLLF-DEMINSGTAPNTFTFNALIDGFGKLGDM 299
Query: 378 DLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPK------------ 235
A L++ M C PDV T+ +LI+G R + V + ++ ++ K
Sbjct: 300 ASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVL 359
Query: 234 ----------------------TGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRI 121
+ + P Y VI GYCK G ++EA+ ++ EM R
Sbjct: 360 VSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRC 419
Query: 120 MPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
P+ TF +LI G G M A+ ++ ML+ GC PD +
Sbjct: 420 KPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEI 459
Score = 71.6 bits (174), Expect = 3e-10
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Frame = -1
Query: 762 LNGDELNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSG 598
LNG+ +V SY ++ C+ E S L+FD G P+ F+ L+ + G
Sbjct: 240 LNGEFAPDVV-SYTMIISGYCKLRKMEEGS-LLFDEMINSGTAPNTFTFNALIDGFGKLG 297
Query: 597 KLDIA----KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPD 430
+ A ++LVQ C + + +D + K +G
Sbjct: 298 DMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMD---MWHKMNEKNIG--AS 352
Query: 429 TCSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLT 250
+++++ GLC ++ A ++ + D P YN +IDG+C++ +VD+ +++
Sbjct: 353 LYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVA 412
Query: 249 QIRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKI 70
++ PD +T+T +I G+C G+M EA D+M++ P+ T N L + K
Sbjct: 413 EMEVNR-CKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKA 471
Query: 69 G 67
G
Sbjct: 472 G 472
Score = 56.6 bits (135), Expect = 9e-06
Identities = 35/141 (24%), Positives = 67/141 (47%)
Frame = -1
Query: 423 SFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQI 244
+++++ R LCR A +++ M PD L+ + +D ELL +
Sbjct: 74 TYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELLADV 133
Query: 243 RPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGN 64
+ + + V Y + + + K+ +A L E+I R P ++T N+LI G ++G
Sbjct: 134 QCNN-VGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGE 192
Query: 63 MRSAVATYENMLSRGCVPDVV 1
+ A +++ S GC+PDV+
Sbjct: 193 IDEAFKLLKDLRSFGCLPDVI 213
>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like isoform X1 [Glycine max]
gi|571448762|ref|XP_006577947.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X2 [Glycine max]
gi|571448764|ref|XP_006577948.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X3 [Glycine max]
gi|571448766|ref|XP_006577949.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g06000-like isoform X4 [Glycine max]
Length = 510
Score = 213 bits (542), Expect = 6e-53
Identities = 114/253 (45%), Positives = 156/253 (61%), Gaps = 5/253 (1%)
Frame = -1
Query: 747 LNHLVKSYNFLVKSLCQAGLHESASKLVFD-----GHFPDGPVFDFLVSSCAQSGKLDIA 583
++H +Y+ L++SLC++ LH +A K+V+D G PD + FLV S A G+LD++
Sbjct: 67 MSHSYLTYSLLLRSLCRSNLHHTA-KVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVS 125
Query: 582 KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTR 403
+ LL + + V +A+ F+ E +RL + P T + NI+ R
Sbjct: 126 RELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFR-ELIRLRYKPVTYTVNILMR 184
Query: 402 GLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPKTGLS 223
GLCR G+ID AF L ND+ SF C PDV+TYNTLI G CR +VD+ LL ++ +
Sbjct: 185 GLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFA 244
Query: 222 PDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIGNMRSAVAT 43
PDVV+YT++ISGYCK KMEE + L EMI PN+FTFN LI GFGK+G+M SA+A
Sbjct: 245 PDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALAL 304
Query: 42 YENMLSRGCVPDV 4
YE ML +GCVPDV
Sbjct: 305 YEKMLVQGCVPDV 317
Score = 105 bits (261), Expect = 2e-20
Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 39/280 (13%)
Frame = -1
Query: 723 NFLVKSLCQAGLHESASKLVFD----GHFPDGPVFDFLVSSCAQSGKLDIAKRLLVQAC- 559
N L++ LC+AG + A +L+ D G PD ++ L+ + ++D A+ LL + C
Sbjct: 180 NILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCL 239
Query: 558 HGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDTCSFNIVTRGLCRLGKI 379
+G+ S ++E F E +R G P+T +FN + G +LG +
Sbjct: 240 NGEFAPDVVSYTTIISGYCKFSKMEEGNLLF-GEMIRSGTAPNTFTFNALIGGFGKLGDM 298
Query: 378 DLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQIRPK------------ 235
A L+ M C PDV T+ +LI+G+ R V + ++ ++ K
Sbjct: 299 ASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVL 358
Query: 234 ----------------------TGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRI 121
+ + P Y VI GYCK G ++EA+ ++ EM R
Sbjct: 359 VSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRC 418
Query: 120 MPNSFTFNVLINGFGKIGNMRSAVATYENMLSRGCVPDVV 1
P+ TF +LI G G M A+ + ML+ GC PD +
Sbjct: 419 KPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEI 458
Score = 68.6 bits (166), Expect = 2e-09
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Frame = -1
Query: 762 LNGDELNHLVKSYNFLVKSLCQAGLHESAS----KLVFDGHFPDGPVFDFLVSSCAQSGK 595
LNG+ +V SY ++ C+ E + +++ G P+ F+ L+ + G
Sbjct: 239 LNGEFAPDVV-SYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGD 297
Query: 594 LDIA----KRLLVQACHGKIKXXXXXXXXXXXXXXXNSWVDEAICFFKDEHLRLGFCPDT 427
+ A +++LVQ C + + +D + K +G T
Sbjct: 298 MASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMD---MWHKMNDKNIGATLYT 354
Query: 426 CSFNIVTRGLCRLGKIDLAFELFNDMGSFDCSPDVVTYNTLIDGFCRAKDVDKGYELLTQ 247
F+++ GLC ++ A ++ + D P YN +IDG+C++ +VD+ +++ +
Sbjct: 355 --FSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAE 412
Query: 246 IRPKTGLSPDVVTYTSVISGYCKLGKMEEASALLDEMISKRIMPNSFTFNVLINGFGKIG 67
+ PD +T+T +I G+C G+M EA + +M++ P+ T N L + K G
Sbjct: 413 MEVNR-CKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAG 471