BLASTX nr result
ID: Cocculus22_contig00009859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00009859
(733 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005424474.1| PREDICTED: polyubiquitin-C isoform X3 [Geosp... 61 5e-07
ref|XP_005424473.1| PREDICTED: polyubiquitin-C isoform X2 [Geosp... 61 5e-07
ref|XP_005424472.1| PREDICTED: polyubiquitin-C isoform X1 [Geosp... 61 5e-07
ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corpo... 60 6e-07
ref|XP_002681070.1| polyubiquitin [Naegleria gruberi] gi|2840946... 60 8e-07
ref|XP_002676006.1| polyubiquitin [Naegleria gruberi] gi|2840896... 60 8e-07
gb|AEI29169.1| ubiquitin-like protein [Vanilla planifolia] 60 1e-06
ref|XP_002674256.1| polyubiquitin [Naegleria gruberi] gi|2840878... 60 1e-06
ref|XP_002668516.1| polyubiquitin [Naegleria gruberi] gi|2909925... 60 1e-06
ref|XP_005424475.1| PREDICTED: polyubiquitin-C isoform X4 [Geosp... 59 1e-06
ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60... 59 1e-06
emb|CCA21679.1| ubiquitin extension protein putative [Albugo lai... 59 1e-06
gb|EFY85333.1| polyubiquitin [Metarhizium acridum CQMa 102] 59 1e-06
ref|XP_002681079.1| polyubiquitin [Naegleria gruberi] gi|2840947... 59 1e-06
ref|XP_002678392.1| polyubiquitin [Naegleria gruberi] gi|2840920... 59 1e-06
ref|XP_002673186.1| polyubiquitin [Naegleria gruberi] gi|2840867... 59 1e-06
ref|XP_002670147.1| ubiquitin [Naegleria gruberi] gi|284083703|g... 59 1e-06
ref|XP_002668572.1| polyubiquitin [Naegleria gruberi] gi|2909735... 59 1e-06
gb|EFA86467.1| ubiquitin [Polysphondylium pallidum PN500] 59 1e-06
pir||S43306 polyubiquitin 6 - Geodia cydonium 59 2e-06
>ref|XP_005424474.1| PREDICTED: polyubiquitin-C isoform X3 [Geospiza fortis]
Length = 381
Score = 60.8 bits (146), Expect = 5e-07
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HLA +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 220 HLALRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 278
Query: 422 SDGVVL 439
DG L
Sbjct: 279 EDGRTL 284
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 144 HLVLRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 202
Query: 422 SDGVVL 439
DG L
Sbjct: 203 EDGRTL 208
>ref|XP_005424473.1| PREDICTED: polyubiquitin-C isoform X2 [Geospiza fortis]
Length = 457
Score = 60.8 bits (146), Expect = 5e-07
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HLA +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 220 HLALRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 278
Query: 422 SDGVVL 439
DG L
Sbjct: 279 EDGRTL 284
Score = 60.8 bits (146), Expect = 5e-07
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HLA +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 296 HLALRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 354
Query: 422 SDGVVL 439
DG L
Sbjct: 355 EDGRTL 360
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 144 HLVLRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 202
Query: 422 SDGVVL 439
DG L
Sbjct: 203 EDGRTL 208
>ref|XP_005424472.1| PREDICTED: polyubiquitin-C isoform X1 [Geospiza fortis]
Length = 543
Score = 60.8 bits (146), Expect = 5e-07
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HLA +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 230 HLALRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 288
Query: 422 SDGVVL 439
DG L
Sbjct: 289 EDGRTL 294
Score = 60.8 bits (146), Expect = 5e-07
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HLA +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 306 HLALRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 364
Query: 422 SDGVVL 439
DG L
Sbjct: 365 EDGRTL 370
Score = 60.8 bits (146), Expect = 5e-07
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HLA +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 382 HLALRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 440
Query: 422 SDGVVL 439
DG L
Sbjct: 441 EDGRTL 446
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 154 HLVLRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 212
Query: 422 SDGVVL 439
DG L
Sbjct: 213 EDGRTL 218
>ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
gi|212516707|gb|EEB18688.1| ubiquitin, putative
[Pediculus humanus corporis]
Length = 844
Score = 60.5 bits (145), Expect = 6e-07
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G + QI +KTLTG I +E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 448 HLVLRLRGGKMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 507
Query: 422 SDGVVL 439
DG L
Sbjct: 508 EDGRTL 513
>ref|XP_002681070.1| polyubiquitin [Naegleria gruberi] gi|284094693|gb|EFC48326.1|
polyubiquitin [Naegleria gruberi]
Length = 153
Score = 60.1 bits (144), Expect = 8e-07
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG+ I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>ref|XP_002676006.1| polyubiquitin [Naegleria gruberi] gi|284089606|gb|EFC43262.1|
polyubiquitin [Naegleria gruberi]
Length = 153
Score = 60.1 bits (144), Expect = 8e-07
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>gb|AEI29169.1| ubiquitin-like protein [Vanilla planifolia]
Length = 95
Score = 59.7 bits (143), Expect = 1e-06
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +2
Query: 218 LHSEKEEK-HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQ 394
LH +KE HL +L G QI +KTLTG I +E+ DT+DN+K KI +KEGI + Q
Sbjct: 1 LHIQKESTLHLVLRLRGGM-QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 59
Query: 395 RLICGEWQLSDGVVL 439
RLI QL DG L
Sbjct: 60 RLIFAGKQLEDGRTL 74
>ref|XP_002674256.1| polyubiquitin [Naegleria gruberi] gi|284087845|gb|EFC41512.1|
polyubiquitin [Naegleria gruberi]
Length = 152
Score = 59.7 bits (143), Expect = 1e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESIDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>ref|XP_002668516.1| polyubiquitin [Naegleria gruberi] gi|290992572|ref|XP_002678908.1|
polyubiquitin [Naegleria gruberi]
gi|284081958|gb|EFC35772.1| polyubiquitin [Naegleria
gruberi] gi|284092522|gb|EFC46164.1| polyubiquitin
[Naegleria gruberi]
Length = 152
Score = 59.7 bits (143), Expect = 1e-06
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT+ N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDGVVLEQLAD 454
DG QL+D
Sbjct: 127 EDG---RQLSD 134
>ref|XP_005424475.1| PREDICTED: polyubiquitin-C isoform X4 [Geospiza fortis]
Length = 305
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/66 (51%), Positives = 43/66 (65%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G R QI +KTLTG IP+E+ DT++N+K KI +KEGI + QRLI QL
Sbjct: 144 HLVLRLRGGR-QIFVKTLTGKTIPLEVEPRDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 202
Query: 422 SDGVVL 439
DG L
Sbjct: 203 EDGRTL 208
>ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein L40
[Vitis vinifera]
Length = 228
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 254 KLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQLSDGV 433
K++ E+ QI +KTLTG I +E+ DT+DN+K KI +KEGI + QRLI QL DG
Sbjct: 95 KITREKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 154
Query: 434 VL 439
L
Sbjct: 155 TL 156
>emb|CCA21679.1| ubiquitin extension protein putative [Albugo laibachii Nc14]
Length = 308
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +2
Query: 266 ERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQLSDGVVL 439
+R QI +KTLTG I +E+ DT+DN+KQKI +KEGI + QRLI QL DG L
Sbjct: 31 DRMQIFVKTLTGKTITLEVESADTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTL 88
>gb|EFY85333.1| polyubiquitin [Metarhizium acridum CQMa 102]
Length = 245
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = +2
Query: 254 KLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQLSDGV 433
++SG +T +KTLTG I +E+ DT+DN+K KI +KEGI + QRLI QL DG
Sbjct: 112 RISGHKTTFFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 171
Query: 434 VL 439
L
Sbjct: 172 TL 173
>ref|XP_002681079.1| polyubiquitin [Naegleria gruberi] gi|284094702|gb|EFC48335.1|
polyubiquitin [Naegleria gruberi]
Length = 153
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>ref|XP_002678392.1| polyubiquitin [Naegleria gruberi] gi|284092004|gb|EFC45648.1|
polyubiquitin [Naegleria gruberi]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>ref|XP_002673186.1| polyubiquitin [Naegleria gruberi] gi|284086768|gb|EFC40442.1|
polyubiquitin [Naegleria gruberi]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>ref|XP_002670147.1| ubiquitin [Naegleria gruberi] gi|284083703|gb|EFC37403.1| ubiquitin
[Naegleria gruberi]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>ref|XP_002668572.1| polyubiquitin [Naegleria gruberi] gi|290973569|ref|XP_002669520.1|
polyubiquitin [Naegleria gruberi]
gi|290982657|ref|XP_002674046.1| polyubiquitin
[Naegleria gruberi] gi|290987245|ref|XP_002676333.1|
polyubiquitin [Naegleria gruberi]
gi|290987329|ref|XP_002676375.1| polyubiquitin
[Naegleria gruberi] gi|290997377|ref|XP_002681258.1|
polyubiquitin [Naegleria gruberi]
gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria
gruberi] gi|284083069|gb|EFC36776.1| polyubiquitin
[Naegleria gruberi] gi|284087634|gb|EFC41302.1|
polyubiquitin [Naegleria gruberi]
gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria
gruberi] gi|284089977|gb|EFC43631.1| polyubiquitin
[Naegleria gruberi] gi|284094881|gb|EFC48514.1|
polyubiquitin [Naegleria gruberi]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 242 HLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQL 421
HL +L G Q+ +KTLTG I +E+ DT++N+KQKIF+KEGI + QRLI QL
Sbjct: 68 HLVLRLRGGM-QLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLIYAGKQL 126
Query: 422 SDG 430
DG
Sbjct: 127 EDG 129
>gb|EFA86467.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 137
Score = 59.3 bits (142), Expect = 1e-06
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 275 QIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLICGEWQLSDGVVLEQL-A 451
QI +KTLTG I +E+ DT++N+K KI +KEGI + QRLI QL DG L
Sbjct: 2 QIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61
Query: 452 DAILGTEPGPGGPWYYLD 505
+ T G PW+Y+D
Sbjct: 62 PEGVNTPFGSPSPWWYVD 79
>pir||S43306 polyubiquitin 6 - Geodia cydonium
Length = 448
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2
Query: 227 EKEEKHLAGKLSGERTQIHIKTLTGHEIPVEIACWDTLDNLKQKIFNKEGIDREDQRLIC 406
+KE HL +L G QI +KTLTG I +E+ DT++N+K KI +KEGI + QRLI
Sbjct: 286 QKETLHLVVRLRGGM-QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 344
Query: 407 GEWQLSDGVVL 439
QL DG L
Sbjct: 345 AGKQLEDGRTL 355