BLASTX nr result
ID: Cocculus22_contig00009169
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00009169
(431 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus... 228 9e-58
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza] 221 1e-55
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 219 4e-55
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 219 4e-55
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 219 4e-55
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 218 7e-55
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 218 7e-55
sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 218 9e-55
gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japo... 218 9e-55
ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group] g... 218 9e-55
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 217 1e-54
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya] 216 3e-54
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 216 3e-54
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 214 1e-53
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco... 214 1e-53
ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polyme... 213 2e-53
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 212 4e-53
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 212 5e-53
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 211 8e-53
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 211 8e-53
>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
Length = 1196
Score = 228 bits (580), Expect = 9e-58
Identities = 105/139 (75%), Positives = 124/139 (89%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE L+PPSKRSW PM+Y P E K+LP +VK++DII FFT++M+ LG IC
Sbjct: 867 DGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQLPREVKHTDIIEFFTKNMVNESLGAIC 926
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GA+DEKCIKLAELAAIAVDFPKTGKI TMPA LKPK+YPDFMGK +FQ
Sbjct: 927 NAHVVHADSSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPAELKPKLYPDFMGKDEFQ 986
Query: 361 SYKSNKILGKLYRKVKDAS 417
+YKS+KILGKLYRK+KD++
Sbjct: 987 TYKSSKILGKLYRKIKDSN 1005
>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
Length = 1195
Score = 221 bits (562), Expect = 1e-55
Identities = 104/138 (75%), Positives = 119/138 (86%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWD+ LIPPSKRSWLPM Y+P E K P +V +SDII FFT++M+ LGTIC
Sbjct: 865 DGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLKPREVTHSDIIEFFTKNMVNESLGTIC 924
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GA+DEKCIKLAELAAIAVDFPKTGKI TMP LKP++YPDFMGK + Q
Sbjct: 925 NAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPDLKPQMYPDFMGKEELQ 984
Query: 361 SYKSNKILGKLYRKVKDA 414
SYKS KILGKLYR+V+DA
Sbjct: 985 SYKSTKILGKLYRRVRDA 1002
>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 219 bits (557), Expect = 4e-55
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y+P E K+L +V + DII+FF+++M++ LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK +FQ
Sbjct: 926 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SYKS KILGKLYR+VKD D E
Sbjct: 986 SYKSKKILGKLYRQVKDVCDAE 1007
>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 219 bits (557), Expect = 4e-55
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y+P E K+L +V + DII+FF+++M++ LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK +FQ
Sbjct: 926 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SYKS KILGKLYR+VKD D E
Sbjct: 986 SYKSKKILGKLYRQVKDVCDAE 1007
>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 219 bits (557), Expect = 4e-55
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y+P E K+L +V + DII+FF+++M++ LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK +FQ
Sbjct: 926 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SYKS KILGKLYR+VKD D E
Sbjct: 986 SYKSKKILGKLYRQVKDVCDAE 1007
>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 218 bits (555), Expect = 7e-55
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y+P E K+L +V + DII+FF+++M++ LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK +FQ
Sbjct: 926 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SYKS KILGKLYR+VKD D E
Sbjct: 986 SYKSKKILGKLYRQVKDVCDTE 1007
>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 218 bits (555), Expect = 7e-55
Identities = 100/142 (70%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE +IPPSK+SW+PM Y+P E K+L +V + DII+FF+++M++ LG IC
Sbjct: 866 DGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK +FQ
Sbjct: 926 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SYKS KILGKLYR+VKD D E
Sbjct: 986 SYKSKKILGKLYRQVKDVCDAE 1007
>sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName:
Full=Protein SHOOTLESS 2 gi|21328146|dbj|BAC00725.1|
putative RNA-dependent RNA polymerase [Oryza sativa
Japonica Group] gi|157279691|dbj|BAF80151.1| SHOOTLESS2
[Oryza sativa Japonica Group]
Length = 1218
Score = 218 bits (554), Expect = 9e-55
Identities = 101/143 (70%), Positives = 119/143 (83%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPP K+SW PM Y PPEAK+LP +V DII+FF ++M+ +LG IC
Sbjct: 889 DGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRIC 948
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GAMDEKCI LAELAA AVDFPKTGK+ MP LKPKVYPDFMGK D Q
Sbjct: 949 NAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQ 1008
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKS KILG+LYR +++AS+G++
Sbjct: 1009 SYKSEKILGRLYRSIQEASNGDV 1031
>gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
Length = 1571
Score = 218 bits (554), Expect = 9e-55
Identities = 101/143 (70%), Positives = 119/143 (83%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPP K+SW PM Y PPEAK+LP +V DII+FF ++M+ +LG IC
Sbjct: 1242 DGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRIC 1301
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GAMDEKCI LAELAA AVDFPKTGK+ MP LKPKVYPDFMGK D Q
Sbjct: 1302 NAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQ 1361
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKS KILG+LYR +++AS+G++
Sbjct: 1362 SYKSEKILGRLYRSIQEASNGDV 1384
>ref|NP_001043229.1| Os01g0527600 [Oryza sativa Japonica Group]
gi|113532760|dbj|BAF05143.1| Os01g0527600, partial
[Oryza sativa Japonica Group]
Length = 385
Score = 218 bits (554), Expect = 9e-55
Identities = 101/143 (70%), Positives = 119/143 (83%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPP K+SW PM Y PPEAK+LP +V DII+FF ++M+ +LG IC
Sbjct: 56 DGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRIC 115
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GAMDEKCI LAELAA AVDFPKTGK+ MP LKPKVYPDFMGK D Q
Sbjct: 116 NAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQ 175
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKS KILG+LYR +++AS+G++
Sbjct: 176 SYKSEKILGRLYRSIQEASNGDV 198
>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 217 bits (553), Expect = 1e-54
Identities = 100/142 (70%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y+P E K++ +V + DII+FF+++M++ LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK +FQ
Sbjct: 926 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SYKS KILGKLYR+VKD D E
Sbjct: 986 SYKSKKILGKLYRQVKDVCDTE 1007
>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
Length = 1195
Score = 216 bits (550), Expect = 3e-54
Identities = 97/137 (70%), Positives = 117/137 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE L+PPSKRSW PM Y+P + K L H V + DII FF ++M+ +LG IC
Sbjct: 867 DGDLYFVTWDENLVPPSKRSWTPMDYEPADTKTLTHPVSHQDIIGFFAKNMVHENLGAIC 926
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D+SE+GA+DE CI LAELAAIAVDFPKTGK+ TMP+ LKPK+YPDFMGK D++
Sbjct: 927 NAHVVHADRSEYGALDENCILLAELAAIAVDFPKTGKLVTMPSHLKPKIYPDFMGKEDYR 986
Query: 361 SYKSNKILGKLYRKVKD 411
SYKSNKILG+LYR++KD
Sbjct: 987 SYKSNKILGRLYRRIKD 1003
>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 1203
Score = 216 bits (549), Expect = 3e-54
Identities = 101/137 (73%), Positives = 117/137 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSKRSWLPM+YD EAK+L V + DII+FF ++M+ +LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GA+DE CIKLAELAA AVDFPKTGK+ TMP LKPK+YPDFMGK D+Q
Sbjct: 926 NAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQ 985
Query: 361 SYKSNKILGKLYRKVKD 411
SY SNKILG+LYR+VKD
Sbjct: 986 SYNSNKILGRLYRQVKD 1002
>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
vesca]
Length = 1197
Score = 214 bits (545), Expect = 1e-53
Identities = 99/143 (69%), Positives = 117/143 (81%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPP K+SW PM+Y+P EAK V + D+I FF +M+ +LG IC
Sbjct: 866 DGDLYFVTWDENLIPPRKKSWQPMEYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVHSD+SE+GA DE C+KLAELAA+AVDFPKTGKI TMP LKPK+YPDFMGK D+Q
Sbjct: 926 NAHVVHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKSNKILG+LYRK+ DA D ++
Sbjct: 986 SYKSNKILGRLYRKICDAYDEDV 1008
>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
6 [Solanum lycopersicum]
Length = 1197
Score = 214 bits (544), Expect = 1e-53
Identities = 101/142 (71%), Positives = 120/142 (84%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y P EAK+L +V+++DII+FF ++M++ LG IC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTDIIDFFLKNMVQESLGEIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GAMDEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK FQ
Sbjct: 926 NAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
SY+S KILGKLYR+V D D E
Sbjct: 986 SYESKKILGKLYRQVIDVYDAE 1007
>ref|XP_006645957.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Oryza
brachyantha]
Length = 1105
Score = 213 bits (542), Expect = 2e-53
Identities = 99/143 (69%), Positives = 117/143 (81%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPP K+SW PM Y PPEAK+LP V DII+FF ++M+ +LG IC
Sbjct: 776 DGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQLPRPVSQHDIIDFFLKNMISENLGRIC 835
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GAMDEKCI LAELAA AVDFPKTGK+ MP LKPKVYPDFMGK +
Sbjct: 836 NAHVVHADLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPQHLKPKVYPDFMGKEESL 895
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKS KILG+LYR +++AS+G++
Sbjct: 896 SYKSEKILGRLYRSIQEASNGDV 918
>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
tuberosum]
Length = 1198
Score = 212 bits (540), Expect = 4e-53
Identities = 99/142 (69%), Positives = 121/142 (85%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW+PM Y P EAK+L +V+++DII+FF+++M++ LG IC
Sbjct: 867 DGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQHTDIIDFFSKNMVQESLGEIC 926
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE GA+DEKC+KLAELAA+AVDFPKTGK+ TMP LKPK+YPDFMGK FQ
Sbjct: 927 NAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQ 986
Query: 361 SYKSNKILGKLYRKVKDASDGE 426
+Y+S KILGKLYR+V D D E
Sbjct: 987 TYESKKILGKLYRQVIDVYDAE 1008
>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
6 [Theobroma cacao]
Length = 1197
Score = 212 bits (539), Expect = 5e-53
Identities = 96/143 (67%), Positives = 120/143 (83%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTW+++LIPP K+SW PM+YDP E K++ +V + DII+FF ++M+ LGTIC
Sbjct: 866 DGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKDIIDFFAKNMVNEHLGTIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GA+DEKCI LAELAA AVDFPKTGKI +MPA LKPK+YPDFMGK ++Q
Sbjct: 926 NAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKS KILG+LYR +KD D ++
Sbjct: 986 SYKSRKILGRLYRHIKDVYDEDL 1008
>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
sinensis]
Length = 1025
Score = 211 bits (537), Expect = 8e-53
Identities = 102/143 (71%), Positives = 116/143 (81%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW PM+Y+ EAK L V DII FF + M+ +LGTIC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWPPMEYNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GA+DE CI LAELAA AVDFPKTGKI TMPA LKPK+YPDFMGK +Q
Sbjct: 926 NAHVVHADHSEYGALDENCILLAELAATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAYQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKSNKILG+LYR+ KDA D +I
Sbjct: 986 SYKSNKILGRLYRQSKDAYDEDI 1008
>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
sinensis]
Length = 1197
Score = 211 bits (537), Expect = 8e-53
Identities = 102/143 (71%), Positives = 116/143 (81%)
Frame = +1
Query: 1 DGDLYFVTWDEMLIPPSKRSWLPMKYDPPEAKKLPHKVKNSDIINFFTESMLRMDLGTIC 180
DGDLYFVTWDE LIPPSK+SW PM+Y+ EAK L V DII FF + M+ +LGTIC
Sbjct: 866 DGDLYFVTWDENLIPPSKKSWPPMEYNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTIC 925
Query: 181 NAHVVHSDQSEHGAMDEKCIKLAELAAIAVDFPKTGKIETMPAALKPKVYPDFMGKPDFQ 360
NAHVVH+D SE+GA+DE CI LAELAA AVDFPKTGKI TMPA LKPK+YPDFMGK +Q
Sbjct: 926 NAHVVHADHSEYGALDENCILLAELAATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAYQ 985
Query: 361 SYKSNKILGKLYRKVKDASDGEI 429
SYKSNKILG+LYR+ KDA D +I
Sbjct: 986 SYKSNKILGRLYRQSKDAYDEDI 1008