BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00009168
         (837 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   222   2e-55
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   220   6e-55
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   220   6e-55
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   214   4e-53
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   213   6e-53
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   212   1e-52
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   212   1e-52
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   210   6e-52
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   210   6e-52
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              210   6e-52
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   210   6e-52
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...   209   1e-51
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   208   2e-51
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     208   2e-51
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]         207   3e-51
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   207   4e-51
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   207   4e-51
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   207   5e-51
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    207   5e-51
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    207   5e-51

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  222 bits (565), Expect = 2e-55
 Identities = 110/204 (53%), Positives = 144/204 (70%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R++KDA D ++    +L +     P DIPYD DLEV G+ ++I DAW+ KCSYD QL  L
Sbjct: 1001 RQIKDAYDEDVAASSELNL----VPGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGL 1056

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            L QYKV  E EVV+GHIWS   Y++ K G +K++L ++Y++LKKEF+  F  + L+FEQ 
Sbjct: 1057 LSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQL 1116

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE----GALTMLSFAWIPVEYLVRVKIR 316
             D +KN +YEQKASAWYQV YHP WVKKSLE ++    G   MLSFAWI  +YL R+KIR
Sbjct: 1117 EDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADYLARIKIR 1176

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             + T +VD +KP+NSLA YLA R+
Sbjct: 1177 HRETGNVDSAKPVNSLAKYLADRM 1200


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  220 bits (560), Expect = 6e-55
 Identities = 110/204 (53%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+++DA D +   DM        TP D+ YD+DLEV G+E+FI +AW+ KCSYD QL  L
Sbjct: 997  RRIRDAYDDD---DMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKVN E E+V+GHIWS   Y + K G +KEKL ++Y  LKK+F+  F NLG +FEQ 
Sbjct: 1054 LGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE----GALTMLSFAWIPVEYLVRVKIR 316
            +  ++N++YE+KASAWYQV YHP W+KKSLE +E     A+ MLSF WI  +YL R+KI+
Sbjct: 1114 TCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIK 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             + T+S DP+KPINSLA YL+ R+
Sbjct: 1174 CRRTKSFDPTKPINSLASYLSDRM 1197


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  220 bits (560), Expect = 6e-55
 Identities = 110/204 (53%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+++DA D +   DM        TP D+ YD+DLEV G+E+FI +AW+ KCSYD QL  L
Sbjct: 997  RRIRDAYDDD---DMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKVN E E+V+GHIWS   Y + K G +KEKL ++Y  LKK+F+  F NLG +FEQ 
Sbjct: 1054 LGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE----GALTMLSFAWIPVEYLVRVKIR 316
            +  ++N++YE+KASAWYQV YHP W+KKSLE +E     A+ MLSF WI  +YL R+KI+
Sbjct: 1114 TCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIK 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             + T+S DP+KPINSLA YL+ R+
Sbjct: 1174 CRRTKSFDPTKPINSLASYLSDRM 1197


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  214 bits (544), Expect = 4e-53
 Identities = 105/178 (58%), Positives = 129/178 (72%), Gaps = 6/178 (3%)
 Frame = -1

Query: 759  DIPYDMDLEVPGSENFILDAWNSKCSYDRQLQALLGQYKVNTEAEVVSGHIWSFYTNN-- 586
            DIPYD DLEV GS ++ILDAW+ KCSYD QL+ LL QYKV  E EVV+GHIWS    N  
Sbjct: 1026 DIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSR 1085

Query: 585  KHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQSSDKDKNSVYEQKASAWYQVTYHPRWV 406
            K G +KE+L  +YH+LKKEF+  F  +  DFEQ ++ +KN +YEQKASAWYQV YHP+WV
Sbjct: 1086 KQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWV 1145

Query: 405  KKSLETKE----GALTMLSFAWIPVEYLVRVKIRSQATESVDPSKPINSLAHYLATRI 244
             KS+E +E    G  +MLSFAWI  +YL R+KIR +  + VD SKP+NSL  YLA RI
Sbjct: 1146 NKSMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
            gi|462422376|gb|EMJ26639.1| hypothetical protein
            PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  213 bits (543), Expect = 6e-53
 Identities = 108/205 (52%), Positives = 141/205 (68%), Gaps = 7/205 (3%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            RKV+DA D +     +L       P DIPYDMDLEVPG+ +F+ DAW  KCSYD QL+ L
Sbjct: 996  RKVRDAYDEDAATSSELHY----FPSDIPYDMDLEVPGAADFVFDAWEKKCSYDGQLKGL 1051

Query: 657  LGQYKVNTEAEVVSGHIWSFYTNN--KHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            +GQYKV  E E+V+GH+WS   +N  K G +KE+L ++Y+ALKKEF+  F NL  + E  
Sbjct: 1052 MGQYKVKREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFENLDSNLEAL 1111

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKS--LETKEG---ALTMLSFAWIPVEYLVRVKI 319
            +D +KN + E+KASAWYQVTYHP+WVK+S  L+  +G    + MLSFAWI  +YL R+KI
Sbjct: 1112 TDDEKNLLCEKKASAWYQVTYHPKWVKQSPPLQEPDGPGDVVVMLSFAWIAADYLARIKI 1171

Query: 318  RSQATESVDPSKPINSLAHYLATRI 244
            +    E +D +KPINSL  YLA RI
Sbjct: 1172 KCHGVEHIDSTKPINSLKRYLADRI 1196


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  212 bits (540), Expect = 1e-52
 Identities = 112/212 (52%), Positives = 140/212 (66%), Gaps = 14/212 (6%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLS-TPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQA 661
            R++KDA      YD D+  P L+    DI YD DLEVPGS +FI DAW  KCSYD QL  
Sbjct: 996  RQIKDA------YDKDIDAPDLNCASSDIHYDTDLEVPGSADFISDAWYQKCSYDGQLSG 1049

Query: 660  LLGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQ 487
            LLGQYKV TE EVV+G IWS   Y + K G +KE+L ++Y ALKKEF+ +F  L LD  +
Sbjct: 1050 LLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFEKLNLDIGE 1109

Query: 486  SSDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----------GALTMLSFAWIPVE 340
             SD++KN +YEQKASAWYQV YHP+WVK+S + K            G + MLSF WI V+
Sbjct: 1110 LSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLKVKSSDNQEADSLGNMVMLSFPWIAVD 1169

Query: 339  YLVRVKIRSQATESVDPSKPINSLAHYLATRI 244
            YL R KIR +  E+ D  KP++SLA YL+ R+
Sbjct: 1170 YLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1201


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score =  212 bits (540), Expect = 1e-52
 Identities = 112/212 (52%), Positives = 140/212 (66%), Gaps = 14/212 (6%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLS-TPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQA 661
            R++KDA      YD D+  P L+    DI YD DLEVPGS +FI DAW  KCSYD QL  
Sbjct: 1042 RQIKDA------YDKDIDAPDLNCASSDIHYDTDLEVPGSADFISDAWYQKCSYDGQLSG 1095

Query: 660  LLGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQ 487
            LLGQYKV TE EVV+G IWS   Y + K G +KE+L ++Y ALKKEF+ +F  L LD  +
Sbjct: 1096 LLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFEKLNLDIGE 1155

Query: 486  SSDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----------GALTMLSFAWIPVE 340
             SD++KN +YEQKASAWYQV YHP+WVK+S + K            G + MLSF WI V+
Sbjct: 1156 LSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLKVKSSDNQEADSLGNMVMLSFPWIAVD 1215

Query: 339  YLVRVKIRSQATESVDPSKPINSLAHYLATRI 244
            YL R KIR +  E+ D  KP++SLA YL+ R+
Sbjct: 1216 YLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1247


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  210 bits (534), Expect = 6e-52
 Identities = 111/204 (54%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R +KD  D ++    ++    L +P DI YD DLEV GS ++I DAW  KCSYDRQL  L
Sbjct: 998  RHIKDVYDEDLSESSEIN---LDSP-DINYDTDLEVTGSADYIDDAWVKKCSYDRQLIGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKV  E EVV+GHIWS   YT+ K G++KEKL ++Y AL+KEF+  F ++  + EQ 
Sbjct: 1054 LGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKEKLGHSYGALRKEFRQIFESMDSEIEQL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETK--EGA--LTMLSFAWIPVEYLVRVKIR 316
            ++ ++N +YE+KASAWYQVTYHP+WV+K LE +  +GA  + MLSFAWI  +YL R+KIR
Sbjct: 1114 NEDERNELYERKASAWYQVTYHPKWVEKKLELQKSDGADPVVMLSFAWIAADYLARIKIR 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
            SQ T +VD SKP+NSL  YLA +I
Sbjct: 1174 SQGTGNVDFSKPVNSLVKYLADKI 1197


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  210 bits (534), Expect = 6e-52
 Identities = 110/204 (53%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+VKD  D E      L+V     P+DIPYD  LE+ GS  FI DAWNSKCSYD QL  L
Sbjct: 998  RQVKDVCDAEGEVSAGLEV----VPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKVN E EVV+GHIWS   Y+  K G +KE+L +AY+ L+KEF+  F  +  DF+  
Sbjct: 1054 LGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETK----EGALTMLSFAWIPVEYLVRVKIR 316
             D +KN +YE+KASAWYQVTYHP WV +SLE +      +  MLSFAWI  +YL R+KIR
Sbjct: 1114 PDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVMLSFAWIAADYLARIKIR 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             +     D +KPINSL  YLA +I
Sbjct: 1174 HRGLPYSDSTKPINSLGRYLADKI 1197


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  210 bits (534), Expect = 6e-52
 Identities = 107/205 (52%), Positives = 138/205 (67%), Gaps = 7/205 (3%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R++KDA + ++    +    ++     +P+D DL +PGS +FI DAW  KCSYD QL  L
Sbjct: 835  RQIKDAYNEDVSESSE----QIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGL 890

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKV  E EVV+GH+WS   Y + K G + E+L +AY +LKKEF+  F  +  DF+Q 
Sbjct: 891  LGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQL 950

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----GALTMLSFAWIPVEYLVRVKI 319
            +D +KN +YEQKASAWYQVTYHP WVKKSLE +      G   MLSFAWI  +YL R+KI
Sbjct: 951  TDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIKI 1010

Query: 318  RSQATESVDPSKPINSLAHYLATRI 244
            R + T +VD SKPINSLA +L  RI
Sbjct: 1011 RRKGTGNVDSSKPINSLARFLVDRI 1035


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  210 bits (534), Expect = 6e-52
 Identities = 107/205 (52%), Positives = 138/205 (67%), Gaps = 7/205 (3%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R++KDA + ++    +    ++     +P+D DL +PGS +FI DAW  KCSYD QL  L
Sbjct: 997  RQIKDAYNEDVSESSE----QIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGL 1052

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKV  E EVV+GH+WS   Y + K G + E+L +AY +LKKEF+  F  +  DF+Q 
Sbjct: 1053 LGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQL 1112

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----GALTMLSFAWIPVEYLVRVKI 319
            +D +KN +YEQKASAWYQVTYHP WVKKSLE +      G   MLSFAWI  +YL R+KI
Sbjct: 1113 TDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYLARIKI 1172

Query: 318  RSQATESVDPSKPINSLAHYLATRI 244
            R + T +VD SKPINSLA +L  RI
Sbjct: 1173 RRKGTGNVDSSKPINSLARFLVDRI 1197


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
            gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
            6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  209 bits (531), Expect = 1e-51
 Identities = 105/205 (51%), Positives = 143/205 (69%), Gaps = 7/205 (3%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+VK+  D     D +    + S P DIPYD+DLE+PG E+ I +AW  KCSYDRQL  L
Sbjct: 997  RRVKEVYDE----DAEASSEESSDPSDIPYDIDLEIPGFEDLIPEAWGHKCSYDRQLIGL 1052

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKV  E E+V+GHIWS   YT+ K  ++KE+L ++Y++LKKEF+  F    LD E+ 
Sbjct: 1053 LGQYKVQKEEEIVTGHIWSMPKYTSKKQCDLKERLKHSYNSLKKEFRKVFEETILDHEEL 1112

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----GALTMLSFAWIPVEYLVRVKI 319
            S+++KN +YE+KASAWY VTYHP+WVKKSLE ++         MLSFAWI  +YL ++KI
Sbjct: 1113 SEEEKNILYEKKASAWYHVTYHPKWVKKSLELQDPDEPSSHAVMLSFAWIAADYLAKIKI 1172

Query: 318  RSQATESVDPSKPINSLAHYLATRI 244
            RS    ++D +KP++SLA +LA R+
Sbjct: 1173 RSGEMGNIDSAKPVDSLAKFLAQRL 1197


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  208 bits (530), Expect = 2e-51
 Identities = 112/214 (52%), Positives = 140/214 (65%), Gaps = 16/214 (7%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLS-TPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQA 661
            R++KDA      YD D+  P L+    DIPYD DLEVPGS +FI DAW  KCSYD QL  
Sbjct: 997  RRIKDA------YDEDIDAPYLNFVTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSG 1050

Query: 660  LLGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQ 487
            LLGQYKV  E EVV+G IWS   Y + K G +KE+L ++Y ALKKEF+ +F  L  D  +
Sbjct: 1051 LLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGE 1110

Query: 486  SSDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----------GALTMLSFAWIPVE 340
             S+++KN  YEQKASAWYQVTYHP WVKKSL+ ++           G+  MLSF WI V+
Sbjct: 1111 LSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPWIAVD 1170

Query: 339  YLVRVKIRS--QATESVDPSKPINSLAHYLATRI 244
            YL R KIR   Q   + D +KP++SLA YL+ R+
Sbjct: 1171 YLARTKIRQRHQRCGNFDSTKPVDSLAKYLSERL 1204


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  208 bits (529), Expect = 2e-51
 Identities = 109/206 (52%), Positives = 136/206 (66%), Gaps = 8/206 (3%)
 Frame = -1

Query: 837  RKVKDASD--GEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQ 664
            R+VKD  D  GE+   ++L       P DIPYD  LE+PGS  FI DAWNSKCSYD QL 
Sbjct: 998  RQVKDVCDTEGEVSAGLEL------VPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLH 1051

Query: 663  ALLGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFE 490
             LLGQYKVN E EVV+GHIWS   Y+  K G +KE+L +AY+ L+KEF+  F  +  DF+
Sbjct: 1052 GLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFD 1111

Query: 489  QSSDKDKNSVYEQKASAWYQVTYHPRWVKKSLETK----EGALTMLSFAWIPVEYLVRVK 322
               D +KN +YE+KASAWYQVTY+P WV +SLE +      +  MLSFAWI  +YL R+K
Sbjct: 1112 LLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADYLARIK 1171

Query: 321  IRSQATESVDPSKPINSLAHYLATRI 244
            IR +  +  D +KPINSL  YL   I
Sbjct: 1172 IRHRGLQYSDSTKPINSLGRYLVDNI 1197


>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
          Length = 1195

 Score =  207 bits (528), Expect = 3e-51
 Identities = 101/178 (56%), Positives = 128/178 (71%), Gaps = 6/178 (3%)
 Frame = -1

Query: 759  DIPYDMDLEVPGSENFILDAWNSKCSYDRQLQALLGQYKVNTEAEVVSGHIWSF--YTNN 586
            DIPYD DL+ PGS  F+LDAW  KC YD QL +LLGQYKV  E E+V+GH+WS   YT+ 
Sbjct: 1018 DIPYDTDLDKPGSAGFLLDAWAQKCLYDWQLTSLLGQYKVKREEEIVTGHVWSMPRYTSR 1077

Query: 585  KHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQSSDKDKNSVYEQKASAWYQVTYHPRWV 406
            K G +KE+L ++Y  LKKEF+  F N+  +FEQ ++ +KN +YEQKASAWYQV YHP+WV
Sbjct: 1078 KEGELKERLKHSYSVLKKEFRQIFENMHPEFEQLTEDEKNILYEQKASAWYQVCYHPKWV 1137

Query: 405  KKSLETKEGALT----MLSFAWIPVEYLVRVKIRSQATESVDPSKPINSLAHYLATRI 244
             KS E +E        MLSFAWI V+YL R+KI+S+    +D +KP+NSLA YLA RI
Sbjct: 1138 DKSRELQEPVCAENPLMLSFAWIAVDYLARIKIKSRQMGDIDSTKPVNSLARYLADRI 1195


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  207 bits (527), Expect = 4e-51
 Identities = 106/204 (51%), Positives = 140/204 (68%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+ KDA D +I    ++ +     P DI YD DLEVP S +FI DAWN KCSYD QL  L
Sbjct: 998  RQSKDAYDEDISVSSEVDI----NPVDIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            L QYKVN E E+V+GHIWS   Y + K G +KE+L ++Y AL+KEF+  F  +  D E  
Sbjct: 1054 LEQYKVNREEELVTGHIWSMPKYNSRKQGELKERLKHSYSALRKEFRQVFEKMDSDCELL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE----GALTMLSFAWIPVEYLVRVKIR 316
            S+ +KN+++E+KASAWYQVTYHP WVKKSL+ +E     ++ +LSFAWI  +YL R+KIR
Sbjct: 1114 SEDEKNALFERKASAWYQVTYHPEWVKKSLDLQEQDSARSVVLLSFAWIANDYLARIKIR 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             +   ++D SKP+N LA Y+A RI
Sbjct: 1174 CREMANIDTSKPVNYLARYVADRI 1197


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  207 bits (527), Expect = 4e-51
 Identities = 104/204 (50%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            RK+ DA D ++    +        P D+ YDMDLEVP + +FI DAW  KCSYD QL+ L
Sbjct: 998  RKICDAYDEDVANSSEQN----HVPSDVKYDMDLEVPKAADFIADAWERKCSYDSQLRGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            + QYK+  E E+V+GH+WS   YT+ K G ++E+L ++Y ALKKEF+  F  +   FE  
Sbjct: 1054 MTQYKIMREEEIVTGHVWSMPKYTSRKQGELQERLKHSYSALKKEFRQFFEKMDTGFESL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETK----EGALTMLSFAWIPVEYLVRVKIR 316
             D  KNS YEQKASAWYQVTYHP WVKKSL+       G + MLSFAWI  +YL R+KI+
Sbjct: 1114 IDDQKNSFYEQKASAWYQVTYHPDWVKKSLDLHGPDGPGDVVMLSFAWIAADYLARIKIK 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             +   ++DP KPIN L  YLA RI
Sbjct: 1174 RREVSNIDPKKPINILTKYLADRI 1197


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571449461|ref|XP_006578148.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  207 bits (526), Expect = 5e-51
 Identities = 110/214 (51%), Positives = 141/214 (65%), Gaps = 16/214 (7%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLS-TPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQA 661
            R +KDA      YD D++ P L+    DIPYD DLEVPGS +FI DAW  KCSYD QL  
Sbjct: 997  RHIKDA------YDEDIEAPYLNFVTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSG 1050

Query: 660  LLGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQ 487
            L+GQYKV  E EVV+G IWS   Y + K G +KE+L ++Y ALKKEF+ +F  L  D  +
Sbjct: 1051 LIGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRYTFEKLNSDVGE 1110

Query: 486  SSDKDKNSVYEQKASAWYQVTYHPRWVKKSLETKE-----------GALTMLSFAWIPVE 340
             S+++KN +YEQKASAWYQVTYHP WVKKSL+ ++           G+  MLSF WI V+
Sbjct: 1111 LSEEEKNLLYEQKASAWYQVTYHPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPWIAVD 1170

Query: 339  YLVRVKIRS--QATESVDPSKPINSLAHYLATRI 244
            YL R KIR   Q + + D +KP++ LA YL+ R+
Sbjct: 1171 YLARTKIRQRHQRSGNFDSTKPVDYLAKYLSERL 1204


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  207 bits (526), Expect = 5e-51
 Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+VKD  D E      L+V     P+DIPYD  L +PGS  FI DAWNSKCSYD QL  L
Sbjct: 998  RQVKDVCDAEGEVSAGLEV----VPKDIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKVN E EVV+GHIWS   Y+  K G +KE+L +AY+ L+KEF+  F  +  DF+  
Sbjct: 1054 LGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETK----EGALTMLSFAWIPVEYLVRVKIR 316
             D +KN +YE+KASAWYQVTY+P WV +SLE +      +  MLSFAWI  +YL R+KIR
Sbjct: 1114 PDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFAWIAADYLARIKIR 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             +  +  D +KPINSL  YL  +I
Sbjct: 1174 HRGLQYSDSTKPINSLGRYLVDKI 1197


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  207 bits (526), Expect = 5e-51
 Identities = 109/204 (53%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
 Frame = -1

Query: 837  RKVKDASDGEIPYDMDLKVPKLSTPQDIPYDMDLEVPGSENFILDAWNSKCSYDRQLQAL 658
            R+VKD  D E      L+V     P+DIPYD  LE+ GS  FI DAWNSKCSYD QL  L
Sbjct: 998  RQVKDVCDAEGEVSAGLEV----VPKDIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGL 1053

Query: 657  LGQYKVNTEAEVVSGHIWSF--YTNNKHGNVKEKLINAYHALKKEFKCSFMNLGLDFEQS 484
            LGQYKVN E EVV+GHIWS   Y+  K G +KE+L +AY+ L+KEF+  F  +  DF+  
Sbjct: 1054 LGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLL 1113

Query: 483  SDKDKNSVYEQKASAWYQVTYHPRWVKKSLETK----EGALTMLSFAWIPVEYLVRVKIR 316
             D +KN +YE+KASAWYQVTYHP WV +SLE +         MLSFAWI  +YL R+KIR
Sbjct: 1114 PDDEKNDMYERKASAWYQVTYHPHWVARSLELQLPDAVSNTVMLSFAWIAADYLARIKIR 1173

Query: 315  SQATESVDPSKPINSLAHYLATRI 244
             +  +  D +KPINSL  YL   I
Sbjct: 1174 HRRLQYSDSTKPINSLGRYLVDNI 1197