BLASTX nr result
ID: Cocculus22_contig00008998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00008998
(379 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850860.1| hypothetical protein AMTR_s00025p00142780 [A... 99 5e-19
ref|XP_007029495.1| Pentatricopeptide repeat-containing protein,... 96 5e-18
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi... 96 7e-18
emb|CBI26569.3| unnamed protein product [Vitis vinifera] 96 7e-18
ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat... 93 4e-17
ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat... 93 4e-17
gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Mimulus... 89 6e-16
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,... 88 1e-15
ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group] g... 88 1e-15
ref|XP_006657333.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006590461.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citr... 85 9e-15
ref|XP_004966403.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [S... 84 2e-14
ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays] 82 8e-14
ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containi... 82 8e-14
>ref|XP_006850860.1| hypothetical protein AMTR_s00025p00142780 [Amborella trichopoda]
gi|548854531|gb|ERN12441.1| hypothetical protein
AMTR_s00025p00142780 [Amborella trichopoda]
Length = 416
Score = 99.4 bits (246), Expect = 5e-19
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRHGH 194
G+SPDVVTY+TLMKAF RARK+DQV +Y EMES+GC PDRKAREMLQ A LI++QRHGH
Sbjct: 355 GLSPDVVTYSTLMKAFFRARKFDQVQEVYKEMESAGCVPDRKAREMLQNALLILEQRHGH 414
>ref|XP_007029495.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508718100|gb|EOY09997.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 513
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/58 (75%), Positives = 54/58 (93%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
GISPDV+TY+TLMKAFIRA+K+D+V IY EMESSGCTPDRKAR+MLQTA ++++QRH
Sbjct: 456 GISPDVITYSTLMKAFIRAKKFDRVPEIYREMESSGCTPDRKARQMLQTALMVLEQRH 513
>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
GISPDVVTY+TLMKA IRARK+D+V IY EMES+GCTPDRKAREMLQTA L+++QRH
Sbjct: 403 GISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQRH 460
>emb|CBI26569.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
GISPDVVTY+TLMKA IRARK+D+V IY EMES+GCTPDRKAREMLQTA L+++QRH
Sbjct: 324 GISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQRH 381
>ref|XP_004249757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Solanum lycopersicum]
Length = 523
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/58 (74%), Positives = 54/58 (93%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
GI+PDV+TY+TLMKAF+RA+K+DQV IY EMES+GCTPDRKAREMLQ+A +I++QRH
Sbjct: 465 GITPDVITYSTLMKAFLRAKKFDQVPKIYSEMESTGCTPDRKAREMLQSALMILEQRH 522
>ref|XP_006351327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565369409|ref|XP_006351328.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565369411|ref|XP_006351329.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 523
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/58 (74%), Positives = 54/58 (93%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
GI+PDV+TY+TLMKAF+RA+K+DQV IY EMES+GCTPDRKAREMLQ+A +I++QRH
Sbjct: 465 GITPDVITYSTLMKAFMRAKKFDQVPKIYSEMESTGCTPDRKAREMLQSALMILEQRH 522
>ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g36300-like [Cucumis sativus]
Length = 433
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = +3
Query: 9 LKGISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
+KGISPDV+TYTTLMKAFIRA+K+ +V IY EMES+GCTPDRKAREML++ + I++QRH
Sbjct: 325 VKGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 384
>ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g36300-like [Cucumis sativus]
Length = 455
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = +3
Query: 9 LKGISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
+KGISPDV+TYTTLMKAFIRA+K+ +V IY EMES+GCTPDRKAREML++ + I++QRH
Sbjct: 325 VKGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 384
>gb|EYU45363.1| hypothetical protein MIMGU_mgv1a022626mg [Mimulus guttatus]
Length = 432
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/62 (67%), Positives = 54/62 (87%)
Frame = +3
Query: 3 MLLKGISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQ 182
+L GISPDVVTY+TLMKAF+ A+K+DQV IY EME+SGC+PDRKAREML++A + ++Q
Sbjct: 371 ILESGISPDVVTYSTLMKAFLWAKKFDQVPKIYSEMEASGCSPDRKAREMLKSALIALEQ 430
Query: 183 RH 188
RH
Sbjct: 431 RH 432
>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 498
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/58 (70%), Positives = 52/58 (89%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQRH 188
GISPDVVTY+TLMKA+IRARK+D+V IY EMESSGCTPD+KARE+LQ A +++ +R+
Sbjct: 401 GISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDKKAREILQAALMVLGRRN 458
>ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza
sativa Japonica Group] gi|215693375|dbj|BAG88757.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa
Japonica Group]
Length = 492
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/57 (68%), Positives = 51/57 (89%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
G+SPDVVTYTTLMKAF+RA+K+++V +Y EME +GCTPDRKAREML AS++++QR
Sbjct: 431 GMSPDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDRKAREMLNDASIVLEQR 487
>ref|XP_006657333.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like, partial [Oryza brachyantha]
Length = 389
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/57 (71%), Positives = 50/57 (87%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
G+SPDVVTYTTLMKAF+RA+K+++V IY EME +GCTPDRKAREML AS I++QR
Sbjct: 330 GMSPDVVTYTTLMKAFMRAKKFEKVSDIYKEMERAGCTPDRKAREMLNDASAILEQR 386
>ref|XP_006590461.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 414
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/56 (69%), Positives = 49/56 (87%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQ 182
G+SPDVVTYTTLMKAFIRA+K+D+V IY EME+ GCTPDRKAR+MLQ A ++++
Sbjct: 356 GVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPDRKARQMLQVALTVLER 411
>ref|XP_006491815.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 514
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/57 (68%), Positives = 52/57 (91%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
GISPD+VTY+TLMKAFIRA+K+ +V IY +MESSGCTPDRKAR++LQ+A ++++QR
Sbjct: 457 GISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALVVLEQR 513
>ref|XP_006428506.1| hypothetical protein CICLE_v10011504mg [Citrus clementina]
gi|567871835|ref|XP_006428507.1| hypothetical protein
CICLE_v10011504mg [Citrus clementina]
gi|557530563|gb|ESR41746.1| hypothetical protein
CICLE_v10011504mg [Citrus clementina]
gi|557530564|gb|ESR41747.1| hypothetical protein
CICLE_v10011504mg [Citrus clementina]
Length = 514
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/57 (68%), Positives = 52/57 (91%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
GISPD+VTY+TLMKAFIRA+K+ +V IY +MESSGCTPDRKAR++LQ+A ++++QR
Sbjct: 457 GISPDLVTYSTLMKAFIRAKKFHKVPEIYKQMESSGCTPDRKARQILQSALVVLEQR 513
>ref|XP_004966403.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X1 [Setaria italica]
gi|514768098|ref|XP_004966404.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X2 [Setaria italica]
gi|514768101|ref|XP_004966405.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X3 [Setaria italica]
Length = 493
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
G+SPDVVTYTTLMK F+RA+K+++V +Y +ME GCTPDRKAREML AS+I++QR
Sbjct: 433 GMSPDVVTYTTLMKTFMRAKKFEKVSEVYKDMERDGCTPDRKAREMLHDASVILEQR 489
>ref|XP_002437576.1| hypothetical protein SORBIDRAFT_10g029640 [Sorghum bicolor]
gi|241915799|gb|EER88943.1| hypothetical protein
SORBIDRAFT_10g029640 [Sorghum bicolor]
Length = 429
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/57 (64%), Positives = 50/57 (87%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
G+SPDVVTYTTLMK F+RA+K+++V +Y EME +GCTPDRKAREML A+++++QR
Sbjct: 355 GMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGCTPDRKAREMLHDATVVLEQR 411
>ref|XP_006573837.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X1 [Glycine max]
gi|571436687|ref|XP_006573838.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X2 [Glycine max]
gi|571436689|ref|XP_006573839.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like isoform X3 [Glycine max]
Length = 523
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/56 (67%), Positives = 49/56 (87%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQ 182
G+SPDVVTYTTLMKAFIRA+K+D+V IY EME+ CTPDRKAR+MLQ A +++++
Sbjct: 461 GVSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDRCTPDRKARQMLQVALMVLER 516
>gb|AFW69441.1| hypothetical protein ZEAMMB73_914225 [Zea mays]
Length = 504
Score = 82.0 bits (201), Expect = 8e-14
Identities = 36/57 (63%), Positives = 49/57 (85%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
G+SPDVVTYTTLMK F+RA+K+++V +Y EME +GC PDRKAREML A+++++QR
Sbjct: 433 GMSPDVVTYTTLMKTFMRAKKFEKVSEVYREMERAGCAPDRKAREMLHDATVVLEQR 489
>ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 82.0 bits (201), Expect = 8e-14
Identities = 37/57 (64%), Positives = 48/57 (84%)
Frame = +3
Query: 15 GISPDVVTYTTLMKAFIRARKYDQVIGIYVEMESSGCTPDRKAREMLQTASLIIKQR 185
G+SPDVVTYTTLMK F+R +K+++V +Y EME +GCTPDRKAREML AS+ ++QR
Sbjct: 433 GMSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCTPDRKAREMLHDASVTLEQR 489