BLASTX nr result
ID: Cocculus22_contig00008844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00008844
(444 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A... 64 3e-08
ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, p... 63 4e-08
ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [C... 63 4e-08
ref|XP_003526635.1| PREDICTED: 40S ribosomal protein S3a-like [G... 62 6e-08
gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii ... 62 6e-08
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ... 62 8e-08
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 62 8e-08
gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi] 61 2e-07
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 61 2e-07
ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocar... 59 7e-07
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C... 59 7e-07
ref|XP_006382772.1| hypothetical protein POPTR_0005s05280g [Popu... 59 7e-07
gb|ABK93399.1| unknown [Populus trichocarpa] 59 7e-07
ref|XP_007030615.1| Ribosomal protein S3Ae [Theobroma cacao] gi|... 59 9e-07
gb|AFK33413.1| unknown [Lotus japonicus] 59 9e-07
gb|ACN40078.1| unknown [Picea sitchensis] 59 9e-07
gb|ABK22319.1| unknown [Picea sitchensis] 59 9e-07
ref|XP_006481160.1| PREDICTED: 40S ribosomal protein S3a-like [C... 58 1e-06
ref|XP_006428321.1| hypothetical protein CICLE_v10012508mg [Citr... 58 1e-06
ref|XP_007157117.1| hypothetical protein PHAVU_002G044200g [Phas... 58 1e-06
>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
gi|548852191|gb|ERN10339.1| hypothetical protein
AMTR_s00026p00042160 [Amborella trichopoda]
Length = 261
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYS+DVGVKVDRP ED P+EG TEVVGA
Sbjct: 226 GKLMEVHGDYSDDVGVKVDRPAEDV-PLEGVTEVVGA 261
>ref|XP_004168031.1| PREDICTED: 40S ribosomal protein S3a-like, partial [Cucumis
sativus]
Length = 208
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDRP E+A VEG TEVVGA
Sbjct: 174 GKLMEVHGDYSEDVGVKVDRPAEEA--VEGATEVVGA 208
>ref|XP_004145387.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449472057|ref|XP_004153483.1| PREDICTED: 40S
ribosomal protein S3a-like [Cucumis sativus]
Length = 260
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDRP E+A VEG TEVVGA
Sbjct: 226 GKLMEVHGDYSEDVGVKVDRPAEEA--VEGATEVVGA 260
>ref|XP_003526635.1| PREDICTED: 40S ribosomal protein S3a-like [Glycine max]
Length = 261
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLME+HGDYSEDVGVKVDRPV++ P EG TEVVGA
Sbjct: 226 GKLMEIHGDYSEDVGVKVDRPVDETMP-EGATEVVGA 261
>gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481169|gb|AAV92215.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481171|gb|AAV92216.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481173|gb|AAV92217.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481175|gb|AAV92218.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481177|gb|AAV92219.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481179|gb|AAV92220.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481181|gb|AAV92221.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481183|gb|AAV92222.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481185|gb|AAV92223.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481187|gb|AAV92224.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481189|gb|AAV92225.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481191|gb|AAV92226.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481193|gb|AAV92227.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481195|gb|AAV92228.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481197|gb|AAV92229.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481199|gb|AAV92230.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481201|gb|AAV92231.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481203|gb|AAV92232.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481205|gb|AAV92233.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481207|gb|AAV92234.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481209|gb|AAV92235.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481211|gb|AAV92236.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481213|gb|AAV92237.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481215|gb|AAV92238.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481217|gb|AAV92239.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481219|gb|AAV92240.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481221|gb|AAV92241.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
Length = 57
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDRPV++ P E ETE+VGA
Sbjct: 22 GKLMEVHGDYSEDVGVKVDRPVDEV-PAEAETELVGA 57
>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVK++RP+E+ VEGETEVVGA
Sbjct: 226 GKLMEVHGDYSEDVGVKLERPIEET-MVEGETEVVGA 261
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDY EDVGVK+DRP +D P+EGE EVVGA
Sbjct: 226 GKLMEVHGDYKEDVGVKIDRPADDV-PMEGEPEVVGA 261
>gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi]
Length = 71
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDY ED GVK+DRP ED PVEGE EVVGA
Sbjct: 36 GKLMEVHGDYKEDFGVKLDRPGEDV-PVEGEAEVVGA 71
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDY ED GVK+DRP ED PVEGE EVVGA
Sbjct: 226 GKLMEVHGDYKEDFGVKLDRPGEDV-PVEGEAEVVGA 261
>ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocarpa]
gi|550338141|gb|ERP60570.1| 40S ribosomal protein S3A
[Populus trichocarpa]
Length = 261
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYS+D+GVK+DRP D EGETEVVGA
Sbjct: 226 GKLMEVHGDYSQDIGVKIDRPA-DETVAEGETEVVGA 261
>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
ribosomal protein S3a-like [Cucumis sativus]
Length = 261
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKV+RP D VEG TEVVGA
Sbjct: 226 GKLMEVHGDYSEDVGVKVERPA-DETAVEGATEVVGA 261
>ref|XP_006382772.1| hypothetical protein POPTR_0005s05280g [Populus trichocarpa]
gi|550338140|gb|ERP60569.1| hypothetical protein
POPTR_0005s05280g [Populus trichocarpa]
Length = 265
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYS+D+GVK+DRP D EGETEVVGA
Sbjct: 230 GKLMEVHGDYSQDIGVKIDRPA-DETVAEGETEVVGA 265
>gb|ABK93399.1| unknown [Populus trichocarpa]
Length = 261
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYS+D+GVK+DRP D EGETEVVGA
Sbjct: 226 GKLMEVHGDYSQDIGVKIDRPA-DETVAEGETEVVGA 261
>ref|XP_007030615.1| Ribosomal protein S3Ae [Theobroma cacao]
gi|508719220|gb|EOY11117.1| Ribosomal protein S3Ae
[Theobroma cacao]
Length = 261
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVK++RP D EGETEVVGA
Sbjct: 226 GKLMEVHGDYSEDVGVKLERPA-DETTAEGETEVVGA 261
>gb|AFK33413.1| unknown [Lotus japonicus]
Length = 261
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/37 (81%), Positives = 30/37 (81%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVG KVDRP D VEG TEVVGA
Sbjct: 226 GKLMEVHGDYSEDVGTKVDRPA-DETVVEGATEVVGA 261
>gb|ACN40078.1| unknown [Picea sitchensis]
Length = 260
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDR E+A P E E E+VGA
Sbjct: 225 GKLMEVHGDYSEDVGVKVDRTTEEA-PAEAEAELVGA 260
>gb|ABK22319.1| unknown [Picea sitchensis]
Length = 245
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDR E+A P E E E+VGA
Sbjct: 210 GKLMEVHGDYSEDVGVKVDRTTEEA-PAEAEAELVGA 245
>ref|XP_006481160.1| PREDICTED: 40S ribosomal protein S3a-like [Citrus sinensis]
Length = 94
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDRP D P E TEV+GA
Sbjct: 59 GKLMEVHGDYSEDVGVKVDRPA-DEPMPEAPTEVIGA 94
>ref|XP_006428321.1| hypothetical protein CICLE_v10012508mg [Citrus clementina]
gi|568853426|ref|XP_006480359.1| PREDICTED: 40S
ribosomal protein S3a-like [Citrus sinensis]
gi|557530378|gb|ESR41561.1| hypothetical protein
CICLE_v10012508mg [Citrus clementina]
Length = 261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVGVKVDRP D P E TEV+GA
Sbjct: 226 GKLMEVHGDYSEDVGVKVDRPA-DEPMPEAPTEVIGA 261
>ref|XP_007157117.1| hypothetical protein PHAVU_002G044200g [Phaseolus vulgaris]
gi|555432940|gb|AGZ15363.1| 40S ribosomal protein
S3a-like protein [Phaseolus vulgaris]
gi|561030532|gb|ESW29111.1| hypothetical protein
PHAVU_002G044200g [Phaseolus vulgaris]
Length = 261
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -1
Query: 444 GKLMEVHGDYSEDVGVKVDRPVEDAPPVEGETEVVGA 334
GKLMEVHGDYSEDVG KV+RP E+ VEG TEVVGA
Sbjct: 226 GKLMEVHGDYSEDVGTKVERPAEET-VVEGATEVVGA 261