BLASTX nr result

ID: Cocculus22_contig00008720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00008720
         (267 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530101.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_007028609.1| Uncharacterized protein TCM_024498 [Theobrom...    57   2e-06

>ref|XP_002530101.1| conserved hypothetical protein [Ricinus communis]
           gi|223530412|gb|EEF32300.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
 Frame = -2

Query: 263 NNEFENVKSWRPHEGWGTWNDNQKKRESNSQNFLKHKTPRFQTDDYQADH---WRNGRGR 93
           NNE+  V   R    WGTW++N +KRE    N  ++KT RF  D++Q D    WRNGRGR
Sbjct: 226 NNEWNEVGD-RTGGDWGTWDENSRKREGAGWNMSRYKTSRFHNDEHQMDRGGWWRNGRGR 284

Query: 92  KRASF 78
           KR +F
Sbjct: 285 KRTNF 289


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Vitis vinifera]
          Length = 1294

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = -2

Query: 263 NNEFENVKSWRPHEGWGTWNDNQKKRESNSQNFLKHKTPRFQTDDYQADHW-RNGRGRKR 87
           NNE + ++S +   GWG WN   +KRE + +N   +K  R Q D YQ  HW R GR +KR
Sbjct: 383 NNEPKKLESRKVSGGWGVWNGGCRKREGSHKNTSSYKCSRVQGDSYQTGHWGRKGRAKKR 442

Query: 86  ASF 78
            +F
Sbjct: 443 VNF 445


>ref|XP_007028609.1| Uncharacterized protein TCM_024498 [Theobroma cacao]
           gi|508717214|gb|EOY09111.1| Uncharacterized protein
           TCM_024498 [Theobroma cacao]
          Length = 305

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = -2

Query: 263 NNEFENVKSWRPHEGWGTWNDNQKKRESNSQNFLKHKTPRFQTDDYQADH-WRNGRGRKR 87
           NNE  N   +R  + W  W+  ++KRE   +   ++KT RF +D+ Q +  WRN RGR+R
Sbjct: 223 NNE-SNYVDYRSGD-WDAWDGTRRKREGPGRYMSRYKTSRFHSDNRQNNRGWRNVRGRQR 280

Query: 86  ASFGHEHHVTDKKPLAPREWNGLYSCG 6
           A+F +E     + P+   +WN +  CG
Sbjct: 281 ANFAYE-----RPPVDSTQWNSVNYCG 302


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