BLASTX nr result
ID: Cocculus22_contig00008577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00008577
(257 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [S... 110 2e-22
ref|XP_004253508.1| PREDICTED: genome polyprotein-like [Solanum ... 102 4e-20
gb|AAN62347.1|AF506028_14 CTV.20 [Citrus trifoliata] 92 7e-17
gb|ABG22513.1| hypothetical protein LOC_Os11g33938 [Oryza sativa... 92 1e-16
emb|CAN74058.1| hypothetical protein VITISV_027639 [Vitis vinifera] 90 3e-16
emb|CAN66235.1| hypothetical protein VITISV_023373 [Vitis vinifera] 90 4e-16
emb|CAN76138.1| hypothetical protein VITISV_043898 [Vitis vinifera] 90 4e-16
gb|AAT94035.1| hypothetical protein [Oryza sativa Japonica Group] 90 4e-16
emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera] 88 1e-15
emb|CAN62426.1| hypothetical protein VITISV_020611 [Vitis vinifera] 87 2e-15
ref|XP_004148722.1| PREDICTED: genome polyprotein-like [Cucumis ... 87 3e-15
ref|XP_004164721.1| PREDICTED: genome polyprotein-like [Cucumis ... 86 7e-15
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]... 85 9e-15
emb|CAN83629.1| hypothetical protein VITISV_031958 [Vitis vinifera] 85 9e-15
sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Inclu... 85 1e-14
dbj|BAO53596.1| reverse transcriptase [Cauliflower mosaic virus] 84 2e-14
dbj|BAO53547.1| reverse transcriptase [Cauliflower mosaic virus] 84 2e-14
ref|XP_004149684.1| PREDICTED: enzymatic polyprotein-like [Cucum... 84 2e-14
dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus] 84 2e-14
dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus] 84 2e-14
>ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [Sorghum bicolor]
gi|241938880|gb|EES12025.1| hypothetical protein
SORBIDRAFT_06g013680 [Sorghum bicolor]
Length = 1360
Score = 110 bits (275), Expect = 2e-22
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GLV+S RK++LFQT++ FLG+KI H + P+ VI+FADKFPD++ K QLQRFLGCLNY
Sbjct: 1105 GLVISARKMKLFQTNIQFLGYKIQHDQVLPVTRVIEFADKFPDEIKEKKQLQRFLGCLNY 1164
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIP 253
+SDFY+ L+ DRK L LK P
Sbjct: 1165 VSDFYERLAKDRKILTERLKKNPP 1188
>ref|XP_004253508.1| PREDICTED: genome polyprotein-like [Solanum lycopersicum]
Length = 545
Score = 102 bits (255), Expect = 4e-20
Identities = 49/84 (58%), Positives = 60/84 (71%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL +S+ K+ LFQT + FLG IH TI PIN I+F DKFPDQ+++KTQLQRFLGCLNY
Sbjct: 200 GLAVSKTKVSLFQTKIRFLGHNIHQGTIIPINRAIEFTDKFPDQIIDKTQLQRFLGCLNY 259
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIP 253
++DF LST K L+ LK P
Sbjct: 260 VADFCPQLSTIIKPLHDRLKKDPP 283
>gb|AAN62347.1|AF506028_14 CTV.20 [Citrus trifoliata]
Length = 3148
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL +S K+ LFQT + FLG I TITPI + FADKFPD++L+KTQLQRFLG LNY
Sbjct: 1325 GLAISNSKVSLFQTKIRFLGHHISKGTITPIERSLAFADKFPDKILDKTQLQRFLGSLNY 1384
Query: 182 LSDFYKNLSTDRKQLNSLLKDK 247
+ DF N+S K L+ LK K
Sbjct: 1385 VLDFCPNISRLSKPLHDRLKKK 1406
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/69 (59%), Positives = 50/69 (72%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL +S K+ LFQT + FLG I TITPI + FADKFPD++L+KTQLQRFLG LNY
Sbjct: 2790 GLAISNSKVSLFQTKIRFLGHHISKGTITPIERSLAFADKFPDKILDKTQLQRFLGSLNY 2849
Query: 182 LSDFYKNLS 208
+ DF N+S
Sbjct: 2850 VLDFCPNIS 2858
>gb|ABG22513.1| hypothetical protein LOC_Os11g33938 [Oryza sativa Japonica Group]
Length = 516
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +2
Query: 50 NFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNYLSDFYKNLSTDRKQLN 229
+FLG+KI + + P+ VI+FA+KFPD++ +KTQLQRFLGCLNY+SDFYK+L+ DRK L
Sbjct: 25 HFLGYKIQYDQVQPVARVIEFAEKFPDEIKDKTQLQRFLGCLNYVSDFYKDLAKDRKILT 84
Query: 230 SLLKDKIP 253
LK K P
Sbjct: 85 ERLKKKPP 92
>emb|CAN74058.1| hypothetical protein VITISV_027639 [Vitis vinifera]
Length = 335
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL LS KI LFQT V FLG IH T TPI I+FADKFPD++ +K QLQRFLG LNY
Sbjct: 98 GLSLSATKINLFQTKVRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSLNY 157
Query: 182 LSDFYKNLSTDRKQLNSLLK 241
+SDF ++LS L LK
Sbjct: 158 VSDFIQDLSQLYAPLRQRLK 177
>emb|CAN66235.1| hypothetical protein VITISV_023373 [Vitis vinifera]
Length = 1968
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL LS KI LFQT V FLG IH T TPI I+FADKFPD++ +K QLQRFLG LNY
Sbjct: 90 GLSLSATKINLFQTKVRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSLNY 149
Query: 182 LSDFYKNLSTDRKQLNSLLK 241
+SDF ++LS L LK
Sbjct: 150 VSDFIQDLSQLCAPLRQRLK 169
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/82 (57%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 GLVLSQRKIQL--FQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCL 175
GL LS KI L FQT V FLG IH T TPI I+FADKFPD++ +K QLQRFLG L
Sbjct: 1551 GLSLSATKINLSFFQTKVRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSL 1610
Query: 176 NYLSDFYKNLSTDRKQLNSLLK 241
NY+SDF ++LS L LK
Sbjct: 1611 NYVSDFIQDLSQLCAPLRQRLK 1632
>emb|CAN76138.1| hypothetical protein VITISV_043898 [Vitis vinifera]
Length = 4014
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL LS KI LFQT V FLG IH T TPI I+FADKFPD++ +K QLQRFLG LNY
Sbjct: 2260 GLSLSATKINLFQTKVRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSLNY 2319
Query: 182 LSDFYKNLSTDRKQLNSLLK 241
+SDF ++LS L LK
Sbjct: 2320 VSDFIQDLSQLCAPLRQRLK 2339
>gb|AAT94035.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 950
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/65 (61%), Positives = 52/65 (80%)
Frame = +2
Query: 53 FLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNYLSDFYKNLSTDRKQLNS 232
FLG+KI + + P+ VI+FA+KFPD++ +KTQLQRFLGCLNY+SDFYK+L+ DRK L
Sbjct: 480 FLGYKIQYDQVQPVARVIEFAEKFPDEIKDKTQLQRFLGCLNYVSDFYKDLAKDRKILTE 539
Query: 233 LLKDK 247
LK K
Sbjct: 540 RLKKK 544
>emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera]
Length = 2913
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/80 (57%), Positives = 53/80 (66%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL LS KI LFQT FLG IH T TPI I+FADKFPD++ +K QLQRFLG LNY
Sbjct: 921 GLSLSATKINLFQTKXRFLGHHIHQGTFTPIQRSIEFADKFPDEIKDKKQLQRFLGSLNY 980
Query: 182 LSDFYKNLSTDRKQLNSLLK 241
+SDF ++LS L LK
Sbjct: 981 VSDFIQDLSQLCAPLRQRLK 1000
>emb|CAN62426.1| hypothetical protein VITISV_020611 [Vitis vinifera]
Length = 987
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL LS KI LFQT V FLG IH +TITPI I+F DKFP+++ +K QLQRFL LNY
Sbjct: 851 GLSLSTTKINLFQTKVRFLGHHIHQETITPIQRSIEFVDKFPBEIKDKKQLQRFLRSLNY 910
Query: 182 LSDFYKNLS 208
+SDF ++LS
Sbjct: 911 VSDFIQDLS 919
>ref|XP_004148722.1| PREDICTED: genome polyprotein-like [Cucumis sativus]
Length = 515
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GLV+SQ KI+LFQ + FLG++I+ I PI + FADKFPD + +KTQLQRFLGC+NY
Sbjct: 384 GLVVSQPKIKLFQVKIRFLGYEINQGIIKPIQRSLDFADKFPDIIQDKTQLQRFLGCINY 443
Query: 182 LSDFYKNL 205
+ DF ++L
Sbjct: 444 IGDFIRDL 451
>ref|XP_004164721.1| PREDICTED: genome polyprotein-like [Cucumis sativus]
Length = 640
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GLV+SQ KI+LFQ + FLG++I+ I PI ++FADKFPD + +KTQLQRFLGC+NY
Sbjct: 350 GLVISQPKIKLFQVKIRFLGYEINRGIIKPIQRSLEFADKFPDVIQDKTQLQRFLGCVNY 409
Query: 182 LSDFYKNL 205
+ DF +L
Sbjct: 410 IRDFICDL 417
>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
gi|401620160|gb|AFP95350.1| reverse transcriptase
[Soybean Putnam virus]
Length = 699
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
G++LS++K QLFQ +NFLG +I + P NH+++ KFPD++ +K QLQRFLG L Y
Sbjct: 455 GIILSKKKAQLFQEKINFLGLEIDQGSHKPQNHILEHIHKFPDKIEDKKQLQRFLGILTY 514
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIPF 256
SD+ L+ RK L S LK +P+
Sbjct: 515 ASDYIPKLAEIRKPLQSKLKKDVPW 539
>emb|CAN83629.1| hypothetical protein VITISV_031958 [Vitis vinifera]
Length = 1174
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/80 (56%), Positives = 51/80 (63%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GL LS KI LF T V FLG IH T TPI I+F DKFPD++ +K QLQRFLG LNY
Sbjct: 924 GLSLSATKINLFHTKVRFLGHHIHQGTFTPIQRSIEFXDKFPDEIKDKKQLQRFLGSLNY 983
Query: 182 LSDFYKNLSTDRKQLNSLLK 241
+SDF +LS L LK
Sbjct: 984 VSDFIXDLSQLCAPLRQRLK 1003
>sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|331571|gb|AAA46358.1| reverse
transcriptase [Cauliflower mosaic virus]
gi|445598|prf||1909346E reverse transcriptase
Length = 680
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
G++LS++K QLF+ +NFLG +I T P H+++ +KFPD L +K QLQRFLG L Y
Sbjct: 431 GIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTY 490
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIPF 256
SD+ NL+ R+ L + LK+ +P+
Sbjct: 491 ASDYIPNLAQMRQPLQAKLKENVPW 515
>dbj|BAO53596.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
G++LS++K QLF+ +NFLG +I T P H+++ +KFPD L +K QLQRFLG L Y
Sbjct: 425 GIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTY 484
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIPF 256
SD+ L+ RK L + LK+ IP+
Sbjct: 485 ASDYIPKLAQIRKPLQAKLKENIPW 509
>dbj|BAO53547.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
G++LS++K QLF+ +NFLG +I T P H+++ +KFPD L +K QLQRFLG L Y
Sbjct: 425 GIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTY 484
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIPF 256
SD+ L+ RK L + LK+ +P+
Sbjct: 485 ASDYISKLAQIRKPLQAKLKENVPW 509
>ref|XP_004149684.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 252
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
GLV+SQ KI+LFQ + FL ++I+ I PI + FADKFPD + +KTQLQRFLGC+NY
Sbjct: 44 GLVVSQPKIKLFQVKIRFLAYEINQGIIKPIQRSLDFADKFPDVIQDKTQLQRFLGCVNY 103
Query: 182 LSDFYKNL 205
+ DF ++L
Sbjct: 104 IGDFIRDL 111
>dbj|BAO53680.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
G++LS++K QLF+ +NFLG +I T P H+++ +KFPD L +K QLQRFLG L Y
Sbjct: 425 GIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTY 484
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIPF 256
SD+ L+ RK L + LK+ +P+
Sbjct: 485 ASDYIPKLAQIRKPLQAKLKENVPW 509
>dbj|BAO53659.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/85 (45%), Positives = 57/85 (67%)
Frame = +2
Query: 2 GLVLSQRKIQLFQTSVNFLGFKIHHQTITPINHVIQFADKFPDQLLNKTQLQRFLGCLNY 181
G++LS++K QLF+ +NFLG +I T P H+++ +KFPD L +K QLQRFLG L Y
Sbjct: 425 GIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLEDKKQLQRFLGILTY 484
Query: 182 LSDFYKNLSTDRKQLNSLLKDKIPF 256
SD+ L+ RK L + LK+ +P+
Sbjct: 485 ASDYIPKLAQIRKPLQAKLKENVPW 509