BLASTX nr result
ID: Cocculus22_contig00008528
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00008528
(573 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, ch... 250 2e-64
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum] 250 2e-64
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola... 248 1e-63
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 246 2e-63
emb|CBI23087.3| unnamed protein product [Vitis vinifera] 246 2e-63
ref|XP_006376594.1| hypothetical protein POPTR_0012s00590g [Popu... 246 4e-63
ref|XP_002317839.1| 30S ribosomal family protein [Populus tricho... 246 4e-63
ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, ch... 245 5e-63
ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citr... 245 5e-63
ref|XP_006376595.1| hypothetical protein POPTR_0012s00590g [Popu... 244 9e-63
ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, ch... 243 3e-62
ref|XP_007039204.1| Plastid-specific 30S ribosomal protein 1 [Th... 241 1e-61
ref|XP_004170169.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-bin... 241 1e-61
gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides] 240 2e-61
ref|XP_007218778.1| hypothetical protein PRUPE_ppa009612mg [Prun... 238 1e-60
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch... 236 2e-60
ref|XP_006394705.1| hypothetical protein EUTSA_v10004495mg [Eutr... 235 7e-60
ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312 [Arab... 235 7e-60
ref|XP_002321945.2| hypothetical protein POPTR_0015s00430g [Popu... 235 7e-60
dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana] 235 7e-60
>ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Solanum
tuberosum]
Length = 312
Score = 250 bits (639), Expect = 2e-64
Identities = 121/151 (80%), Positives = 139/151 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLILQGKNL++T ++K YVEEK+GKAVQ+HSHL REVDVRLS+RGGE+G+
Sbjct: 76 MSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGK 135
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GPK+RRCEVTLFTKKHGV+RAEEDAES+YGSID+VSSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 136 GPKIRRCEVTLFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 195
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDE 568
DRLKVR+PE +V ED+E QE EV+ D+
Sbjct: 196 DRLKVRDPEVLLVQEDLETLPQEEEVEDDDK 226
>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 250 bits (639), Expect = 2e-64
Identities = 121/151 (80%), Positives = 139/151 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLILQGKNL++T ++K YVEEK+GKAVQ+HSHL REVDVRLS+RGGE+G+
Sbjct: 48 MSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGK 107
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GPK+RRCEVTLFTKKHGV+RAEEDAES+YGSID+VSSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 108 GPKIRRCEVTLFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 167
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDE 568
DRLKVR+PE +V ED+E QE EV+ D+
Sbjct: 168 DRLKVRDPEVLLVQEDLETLPQEEEVEDDDK 198
>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
gi|51457950|gb|AAU03364.1| chloroplast-specific
ribosomal protein [Solanum lycopersicum]
Length = 311
Score = 248 bits (632), Expect = 1e-63
Identities = 119/147 (80%), Positives = 136/147 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLILQGKNL++T ++K YVEEK+GKAVQ+HSHL REVDVRLS+RGGE+G+
Sbjct: 76 MSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELGK 135
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GPK+RRCEVTLFTKKHGV+RAEED ES+YGSID+VSSIIQRKLRKIKEKDSD GRHMKGF
Sbjct: 136 GPKIRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGF 195
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVD 556
DRLKVR+PE +V ED+E SQE EV+
Sbjct: 196 DRLKVRDPEALLVQEDLETLSQEEEVE 222
>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
vinifera]
Length = 298
Score = 246 bits (629), Expect = 2e-63
Identities = 117/152 (76%), Positives = 141/152 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLILQGKNL++T++++ +VEEKVGKAVQ+HSHLVREVDVRLS+RGGE+G+
Sbjct: 69 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGK 128
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GPK+RRCEVTLFTKKHGVVRAEE AE+LYGSID+VSSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 129 GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 188
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
+RLKVR+PE +V+E+ + Q+ + D I+E+
Sbjct: 189 NRLKVRDPETPLVEEEADVVPQKEDGDLINEI 220
>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 246 bits (629), Expect = 2e-63
Identities = 117/152 (76%), Positives = 141/152 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLILQGKNL++T++++ +VEEKVGKAVQ+HSHLVREVDVRLS+RGGE+G+
Sbjct: 1 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGK 60
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GPK+RRCEVTLFTKKHGVVRAEE AE+LYGSID+VSSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 61 GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 120
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
+RLKVR+PE +V+E+ + Q+ + D I+E+
Sbjct: 121 NRLKVRDPETPLVEEEADVVPQKEDGDLINEI 152
>ref|XP_006376594.1| hypothetical protein POPTR_0012s00590g [Populus trichocarpa]
gi|550326078|gb|ERP54391.1| hypothetical protein
POPTR_0012s00590g [Populus trichocarpa]
Length = 242
Score = 246 bits (627), Expect = 4e-63
Identities = 116/152 (76%), Positives = 141/152 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPL SVKLI+QGKNL++T+++K++VE+KVGKAVQ+HSHLVREVDVRLS+RGGE+G+
Sbjct: 77 MSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELGK 136
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFT +HGVVRAEEDAE++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGF
Sbjct: 137 GPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGF 196
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
+RLKVREP PQ+V+ D +E SQ+ D I+EV
Sbjct: 197 NRLKVREPVPQVVEGDADEVSQQEVEDSIEEV 228
>ref|XP_002317839.1| 30S ribosomal family protein [Populus trichocarpa]
gi|222858512|gb|EEE96059.1| 30S ribosomal family protein
[Populus trichocarpa]
Length = 306
Score = 246 bits (627), Expect = 4e-63
Identities = 116/152 (76%), Positives = 141/152 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPL SVKLI+QGKNL++T+++K++VE+KVGKAVQ+HSHLVREVDVRLS+RGGE+G+
Sbjct: 77 MSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELGK 136
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFT +HGVVRAEEDAE++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGF
Sbjct: 137 GPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGF 196
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
+RLKVREP PQ+V+ D +E SQ+ D I+EV
Sbjct: 197 NRLKVREPVPQVVEGDADEVSQQEVEDSIEEV 228
>ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Citrus sinensis]
Length = 319
Score = 245 bits (626), Expect = 5e-63
Identities = 124/190 (65%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Frame = +2
Query: 5 SSLHSTI-FNRFCFSPFLEISPKYKEGXXXXXXXXXXXMSWDGPLSSVKLILQGKNLDMT 181
S L T+ +N F PF +I+ MSWDGPLSSVKLI+QGKNL++T
Sbjct: 54 SQLAKTLSYNSSFFGPFKQIT--VMRPTKVHTKPLPVRMSWDGPLSSVKLIIQGKNLELT 111
Query: 182 ESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGRGPKLRRCEVTLFTKKHGVVRAE 361
+++K +VEEKVGKAV +HSHLVREVDVRLS+RGGE G+GP++RRCEVTLFTKKHGVVRAE
Sbjct: 112 DTVKNHVEEKVGKAVLKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAE 171
Query: 362 EDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPEPQIVDEDVEETSQ 541
EDAE++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGF+RLKVREP Q+V+ D + S+
Sbjct: 172 EDAETVYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVTQVVENDADVQSE 231
Query: 542 EGEVDFIDEV 571
E + +F+DE+
Sbjct: 232 EEDDNFVDEI 241
>ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citrus clementina]
gi|557543502|gb|ESR54480.1| hypothetical protein
CICLE_v10021260mg [Citrus clementina]
Length = 313
Score = 245 bits (626), Expect = 5e-63
Identities = 124/190 (65%), Positives = 152/190 (80%), Gaps = 1/190 (0%)
Frame = +2
Query: 5 SSLHSTI-FNRFCFSPFLEISPKYKEGXXXXXXXXXXXMSWDGPLSSVKLILQGKNLDMT 181
S L T+ +N F PF +I+ MSWDGPLSSVKLI+QGKNL++T
Sbjct: 48 SQLAKTLSYNSSFFGPFKQIT--VMRPTKVHTKPLPVRMSWDGPLSSVKLIIQGKNLELT 105
Query: 182 ESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGRGPKLRRCEVTLFTKKHGVVRAE 361
+++K +VEEKVGKAV +HSHLVREVDVRLS+RGGE G+GP++RRCEVTLFTKKHGVVRAE
Sbjct: 106 DTVKNHVEEKVGKAVLKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAE 165
Query: 362 EDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPEPQIVDEDVEETSQ 541
EDAE++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGF+RLKVREP Q+V+ D + S+
Sbjct: 166 EDAETVYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVTQVVENDADVQSE 225
Query: 542 EGEVDFIDEV 571
E + +F+DE+
Sbjct: 226 EEDDNFVDEI 235
>ref|XP_006376595.1| hypothetical protein POPTR_0012s00590g [Populus trichocarpa]
gi|550326079|gb|ERP54392.1| hypothetical protein
POPTR_0012s00590g [Populus trichocarpa]
Length = 232
Score = 244 bits (624), Expect = 9e-63
Identities = 115/152 (75%), Positives = 141/152 (92%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPL SVKLI+QGKNL++T+++K++VE+KVGKAVQ+HSHLVREVDVRLS+RGGE+G+
Sbjct: 77 MSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELGK 136
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFT +HGVVRAEEDAE++Y SIDLVSSIIQRKLRKIKEK+SDHGRHMKGF
Sbjct: 137 GPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGF 196
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
+RLKVREP PQ+V+ D +E SQ+ D I+E+
Sbjct: 197 NRLKVREPVPQVVEGDADEVSQQEVEDSIEEL 228
>ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Cucumis sativus]
Length = 310
Score = 243 bits (620), Expect = 3e-62
Identities = 117/152 (76%), Positives = 139/152 (91%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
M+WDGPLSSVKLI+QGKNL++TE++KK+VEEKVGKAVQ+HSHLVREVDVRLS+RGGE G+
Sbjct: 81 MTWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK 140
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGVVRAEEDAE+++ SIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Sbjct: 141 GPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF 200
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
DR KVREP P +V+++ EE QE + IDE+
Sbjct: 201 DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEI 232
>ref|XP_007039204.1| Plastid-specific 30S ribosomal protein 1 [Theobroma cacao]
gi|508776449|gb|EOY23705.1| Plastid-specific 30S
ribosomal protein 1 [Theobroma cacao]
Length = 320
Score = 241 bits (614), Expect = 1e-61
Identities = 116/152 (76%), Positives = 141/152 (92%), Gaps = 1/152 (0%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLI+QGKNL++T+++K++VEEKVGKAVQ+HSHLVREVDVRLS+RGGE G+
Sbjct: 81 MSWDGPLSSVKLIIQGKNLELTDTVKQHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGK 140
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGVVRAEEDAE++YGSIDLVSSI+QRKLRKIKEK+SDHGRHMKGF
Sbjct: 141 GPRIRRCEVTLFTKKHGVVRAEEDAETVYGSIDLVSSILQRKLRKIKEKESDHGRHMKGF 200
Query: 476 DRLKVREPEPQIVDEDVEET-SQEGEVDFIDE 568
+RLKVREP +V+++VE QE +V+ + E
Sbjct: 201 NRLKVREPVAVLVEDEVEAVPEQEDDVEAVPE 232
>ref|XP_004170169.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-binding factor PSRP1,
chloroplastic-like [Cucumis sativus]
Length = 310
Score = 241 bits (614), Expect = 1e-61
Identities = 116/152 (76%), Positives = 138/152 (90%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
M+WDGPLSSVKLI+QGKNL++TE++KK+VEEKVGKAVQ+HSHLVREVDVRLS+RGG G+
Sbjct: 81 MTWDGPLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGXFGK 140
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGVVRAEEDAE+++ SIDLVSSIIQRKLRKIKEKDSD GRH+KGF
Sbjct: 141 GPRIRRCEVTLFTKKHGVVRAEEDAETVFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGF 200
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
DR KVREP P +V+++ EE QE + IDE+
Sbjct: 201 DRSKVREPAPIVVEDEEEEVFQEDGGEVIDEI 232
>gb|ABK96666.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 268
Score = 240 bits (612), Expect = 2e-61
Identities = 112/152 (73%), Positives = 142/152 (93%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLI+QGK+L++++++KK+VE+KVGKAVQ+ SHLVR VDVRLS+RGGE+G+
Sbjct: 76 MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGK 135
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTK+HGVVRAEEDAE++Y SIDL SSIIQRKLRKIK+K+SDHGRHMKGF
Sbjct: 136 GPRIRRCEVTLFTKRHGVVRAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGF 195
Query: 476 DRLKVREPEPQIVDEDVEETSQEGEVDFIDEV 571
+RLKVREP Q+V++D +E SQ+ + D+I+EV
Sbjct: 196 NRLKVREPMHQVVEDDADEVSQQEDEDYIEEV 227
>ref|XP_007218778.1| hypothetical protein PRUPE_ppa009612mg [Prunus persica]
gi|462415240|gb|EMJ19977.1| hypothetical protein
PRUPE_ppa009612mg [Prunus persica]
Length = 285
Score = 238 bits (606), Expect = 1e-60
Identities = 117/153 (76%), Positives = 138/153 (90%), Gaps = 2/153 (1%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLI+QG+NL+++E++KK+VE+KVGKAVQ+HSHL RE DVRLS+RGGE G+
Sbjct: 53 MSWDGPLSSVKLIVQGRNLELSEAVKKHVEDKVGKAVQKHSHLAREADVRLSVRGGEFGK 112
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGV RAEE+AE+LY SIDL SSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 113 GPRIRRCEVTLFTKKHGVFRAEEEAETLYASIDLASSIIQRKLRKIKEKDSDHGRHMKGF 172
Query: 476 DRLKVREPEPQIVDEDVEETS--QEGEVDFIDE 568
+RLKVREP QIV E+ EE + QE E DFI++
Sbjct: 173 NRLKVREPATQIVVEEEEEETVPQEEEGDFIND 205
>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
Plastid-specific 30S ribosomal protein 1, chloroplast
precursor, putative [Ricinus communis]
Length = 311
Score = 236 bits (603), Expect = 2e-60
Identities = 116/155 (74%), Positives = 138/155 (89%), Gaps = 3/155 (1%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSW+GPLSSVKLI QGKNL++T+++KK+VE+KVGKAVQ+HSHLVREVDVRLS+RGGE G+
Sbjct: 79 MSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGK 138
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GPK+RRCEVTLFTKKHGV+RAEEDAE++Y SIDLVSSIIQRKLRKIKEK SDHGRHMKGF
Sbjct: 139 GPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGF 198
Query: 476 DRLKVREPEPQIVDEDVEETS---QEGEVDFIDEV 571
+RLKVREP + V +D +E + + D+IDEV
Sbjct: 199 NRLKVREPVAEPVKDDTDEVDGVLGDEDEDYIDEV 233
>ref|XP_006394705.1| hypothetical protein EUTSA_v10004495mg [Eutrema salsugineum]
gi|557091344|gb|ESQ31991.1| hypothetical protein
EUTSA_v10004495mg [Eutrema salsugineum]
Length = 352
Score = 235 bits (599), Expect = 7e-60
Identities = 116/154 (75%), Positives = 139/154 (90%), Gaps = 2/154 (1%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPL+SVKLI+QGKNL+++E +K++VEEKVGK+VQ+HSHLVREVDVRLS+RGGE G+
Sbjct: 117 MSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGK 176
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGVVRAEEDAE++Y IDLVS+IIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 177 GPRIRRCEVTLFTKKHGVVRAEEDAETVYDCIDLVSTIIQRKLRKIKEKDSDHGRHMKGF 236
Query: 476 DRLKVREPEPQIVDEDVEET--SQEGEVDFIDEV 571
+RLKVREP + V EDVE+ S GEV+ D++
Sbjct: 237 NRLKVREPVIEPVVEDVEDVTDSSPGEVEDEDDL 270
>ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312 [Arabidopsis lyrata subsp.
lyrata] gi|297317953|gb|EFH48375.1| hypothetical protein
ARALYDRAFT_489312 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 235 bits (599), Expect = 7e-60
Identities = 116/158 (73%), Positives = 140/158 (88%), Gaps = 6/158 (3%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPL+SVKLI+QGKNL+++E +K++VEEKVGK+VQ+HSHLVREVDVRLS+RGGE G+
Sbjct: 73 MSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGK 132
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGVVRAEEDAE++Y IDLVS+IIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 133 GPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGF 192
Query: 476 DRLKVREPEPQIVDEDVEETS------QEGEVDFIDEV 571
+RLKVREP + V EDVE+++ +E E D I E+
Sbjct: 193 NRLKVREPVIEPVVEDVEDSTDSSLGEEEEEDDLIKEI 230
>ref|XP_002321945.2| hypothetical protein POPTR_0015s00430g [Populus trichocarpa]
gi|118488335|gb|ABK95986.1| unknown [Populus
trichocarpa] gi|550321660|gb|EEF06072.2| hypothetical
protein POPTR_0015s00430g [Populus trichocarpa]
Length = 306
Score = 235 bits (599), Expect = 7e-60
Identities = 112/153 (73%), Positives = 143/153 (93%), Gaps = 1/153 (0%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPLSSVKLI+QGK+L++++++KK+VE+KVGKAVQ+ SHLVR VDVRLS+RGGE+G+
Sbjct: 76 MSWDGPLSSVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELGK 135
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTK+HGVVRAEEDAE+++ SIDLVSSIIQRKLRKIK+K+SDHGRHMKGF
Sbjct: 136 GPRIRRCEVTLFTKRHGVVRAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGF 195
Query: 476 DRLKVREPEPQ-IVDEDVEETSQEGEVDFIDEV 571
+RLKVREP Q +V++D +E SQ+ + D+I+EV
Sbjct: 196 NRLKVREPMHQVVVEDDADEVSQQEDEDYIEEV 228
>dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana]
Length = 365
Score = 235 bits (599), Expect = 7e-60
Identities = 116/158 (73%), Positives = 140/158 (88%), Gaps = 6/158 (3%)
Frame = +2
Query: 116 MSWDGPLSSVKLILQGKNLDMTESLKKYVEEKVGKAVQRHSHLVREVDVRLSLRGGEIGR 295
MSWDGPL+SVKLI+QGKNL+++E +K++VEEKVGK+VQ+HSHLVREVDVRLS+RGGE G+
Sbjct: 130 MSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGGEFGK 189
Query: 296 GPKLRRCEVTLFTKKHGVVRAEEDAESLYGSIDLVSSIIQRKLRKIKEKDSDHGRHMKGF 475
GP++RRCEVTLFTKKHGVVRAEEDAE++Y IDLVS+IIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 190 GPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGF 249
Query: 476 DRLKVREPEPQIVDEDVEETS------QEGEVDFIDEV 571
+RLKVREP + V EDVE+++ +E E D I E+
Sbjct: 250 NRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEI 287