BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00008454
         (1655 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   520   e-144
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   520   e-144
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              519   e-144
gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Mimulus...   500   e-139
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth...   496   e-137
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   496   e-137
ref|XP_007017040.1| Pseudouridine synthase family protein [Theob...   493   e-136
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   492   e-136
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth...   484   e-134
ref|XP_007207376.1| hypothetical protein PRUPE_ppa004352mg [Prun...   483   e-133
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth...   482   e-133
ref|XP_007142071.1| hypothetical protein PHAVU_008G250100g [Phas...   481   e-133
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu...   476   e-131
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   476   e-131
ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synth...   475   e-131
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth...   474   e-131
ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synth...   474   e-131
ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synth...   472   e-130
ref|XP_007142072.1| hypothetical protein PHAVU_008G250200g [Phas...   460   e-127
ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth...   459   e-126

>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
          Length = 564

 Score =  520 bits (1338), Expect = e-144
 Identities = 277/431 (64%), Positives = 328/431 (76%), Gaps = 7/431 (1%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETA+FKAGGIRDSNYG+LHKIGW RSSRTDKGVHSLATMISLKMEIP NAWK+DP GI 
Sbjct: 95   LETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIA 154

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N +LPNN+KVFSILPSQRSFDAR+EC +RRYSYLLPAEIIGI++ SS+ EID ++
Sbjct: 155  LANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHI 214

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQ-----RRMXXXXXXXXXXXXXXXE 1131
            +EFNDIL +FEGEHPF NYTIRSKYRKQ P K+        RR                 
Sbjct: 215  AEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDG 274

Query: 1130 LVKNRVNIVSVLDL-SGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLC 954
               + +N V   D   GEN N  S  ++  E  V +   ++   + +S          L 
Sbjct: 275  EENSGINGVISSDYDEGENQNS-SESTSFVEHPVGSSNNNEKGLKEQS--------PKLV 325

Query: 953  VHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGT 774
            V ARWLH PDERDRI+ASHFRKI+ CSCGKLE+ LG+ YVE+SI GESFMLHQIRKMVGT
Sbjct: 326  VRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGT 385

Query: 773  AVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVE 597
            A+AVKR+LLP D++ LSLTKFSRIVLPLAPSEVLILRGN FS+R+ PG + RPE+  L+E
Sbjct: 386  AIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLME 445

Query: 596  SEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWK 417
            SEEILKSV+EFY SV+LPQVSKFL+PSKSPW+DW+  L   +SIP+ EL++VR A KLWK
Sbjct: 446  SEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAWKLWK 504

Query: 416  ESFRIKTNVPS 384
            E+FR +T V S
Sbjct: 505  ENFRSRTKVMS 515


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  520 bits (1338), Expect = e-144
 Identities = 277/427 (64%), Positives = 327/427 (76%), Gaps = 7/427 (1%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETA+FKAGGIRDSNYG+LHKIGW RSSRTDKGVHSLATMISLKMEIP NAWK+DP GI 
Sbjct: 95   LETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIA 154

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N +LPNN+KVFSILPSQRSFDAR+EC +RRYSYLLPAEIIGI++ SS+ EID ++
Sbjct: 155  LANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHI 214

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQ-----RRMXXXXXXXXXXXXXXXE 1131
            +EFNDIL +FEGEHPF NYTIRSKYRKQ P K+        RR                 
Sbjct: 215  AEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDG 274

Query: 1130 LVKNRVNIVSVLDL-SGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLC 954
               + VN V   D   GEN N  S  ++  E  V +   ++   + +S        S L 
Sbjct: 275  EENSGVNGVISSDYDEGENQNS-SESTSFVEHPVGSSNNNEKGLKEQS--------SKLV 325

Query: 953  VHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGT 774
            V ARWLH PDERDRI+ASHFRKI+ CSCGKLE+ LG+ YVE+SI GESFMLHQIRKMVGT
Sbjct: 326  VRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGT 385

Query: 773  AVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVE 597
            A+AVKR+LLP D++ LSLTKFSRIVLPLAPSEVLILRGN FS+R+ PG + RPE+  L+E
Sbjct: 386  AIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLME 445

Query: 596  SEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWK 417
            SEEILKSV+EFY SV+LPQVSKFL+PSKSPW+DW+  L   +SIP+ EL++VR A KLWK
Sbjct: 446  SEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAWKLWK 504

Query: 416  ESFRIKT 396
            E+FR +T
Sbjct: 505  ENFRSRT 511


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  519 bits (1337), Expect = e-144
 Identities = 273/425 (64%), Positives = 327/425 (76%), Gaps = 1/425 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETA+FKAGGIRDSNYG+LHKIGW RSSRTDKGVHSLATMISLKMEIP NAWK+DP GI 
Sbjct: 95   LETAVFKAGGIRDSNYGNLHKIGWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIA 154

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N +LPNN+KVFSILPSQRSFDAR+EC +RRYSYLLPAEIIGI++ SS+ EID ++
Sbjct: 155  LANYVNFHLPNNIKVFSILPSQRSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHI 214

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            +EFNDIL +FEGEHPF NYTIRSKYRKQ P K+                        + +
Sbjct: 215  AEFNDILNTFEGEHPFQNYTIRSKYRKQFPAKQSPGN---------------GGVFRRAK 259

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
             +++S     GEN N  S  ++  E  V +   ++   + +S          L V ARWL
Sbjct: 260  SSVISSDYDEGENQNS-SESTSFVEHPVGSSNNNEKGLKEQS--------PKLVVRARWL 310

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            H PDERDRI+ASHFRKI+ CSCGKLE+ LG+ YVE+SI GESFMLHQIRKMVGTA+AVKR
Sbjct: 311  HGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKR 370

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEILK 579
            +LLP D++ LSLTKFSRIVLPLAPSEVLILRGN FS+R+ PG + RPE+  L+ESEEILK
Sbjct: 371  ELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILK 430

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESFRIK 399
            SV+EFY SV+LPQVSKFL+PSKSPW+DW+  L   +SIP+ EL++VR A KLWKE+FR +
Sbjct: 431  SVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDDVRTAWKLWKENFRSR 489

Query: 398  TNVPS 384
            T V S
Sbjct: 490  TKVMS 494


>gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Mimulus guttatus]
          Length = 506

 Score =  500 bits (1287), Expect = e-139
 Identities = 255/420 (60%), Positives = 316/420 (75%), Gaps = 4/420 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE AI+KAGGIRDSN+GDL+KIGWARSSRTDKGVHSLATMI+LK+EIP++AW +DP G  
Sbjct: 97   LENAIYKAGGIRDSNFGDLNKIGWARSSRTDKGVHSLATMITLKLEIPESAWNNDPNGFA 156

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LA ++N+YLP N++VFSILPSQRSFDAR+EC +R+YSYLLPAEIIG++  S++ E+D +L
Sbjct: 157  LATYVNSYLPRNIRVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENSTASEVDHHL 216

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            S+FNDIL +F+GEHPFHNYT+RSKYRKQ P+K  S  +M                     
Sbjct: 217  SDFNDILNTFQGEHPFHNYTVRSKYRKQFPKKGSSASKMGKSLD---------------- 260

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNF---ENESIPPDEGARSPLCVHA 945
            V    V + S +          ++    + E+   D+    + E  P  +   SP  V A
Sbjct: 261  VQSEFVSEGSDDEEEEEDTNVVTESLATEAEETKYDSLLPKDEEDQPKKQNLVSP--VLA 318

Query: 944  RWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVA 765
            RWLHEPDE+DRI+ASHFRKI+ CSCGKLE+  GM++VEISI GESFMLHQIRKMVGTA+A
Sbjct: 319  RWLHEPDEKDRISASHFRKIFQCSCGKLEQLSGMNFVEISICGESFMLHQIRKMVGTAIA 378

Query: 764  VKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEE 588
            VKR LLP D+++LSL+KFSRIV+PLAPSEVLILRGN F +R  PG I RPE+  LVES+E
Sbjct: 379  VKRDLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRNRPGNIKRPEMLTLVESKE 438

Query: 587  ILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
            ILK V++FY SVMLPQ+S FL+P KSPWN+W+  LDANT IP+ +LEEVR A KLW+E F
Sbjct: 439  ILKLVDDFYYSVMLPQLSVFLDPVKSPWNEWVDLLDANTCIPESQLEEVRSAWKLWREEF 498


>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
            [Solanum tuberosum]
          Length = 423

 Score =  496 bits (1276), Expect = e-137
 Identities = 249/421 (59%), Positives = 318/421 (75%), Gaps = 1/421 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE AIFKAGGIRDSN+G+L+KIGWARSSRTDKGVHSLATMISLKMEIP +AW+DDP GI 
Sbjct: 18   LEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIA 77

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN +N+ LP N++VFSILPS++ FDAR+EC  R+YSYL+PAEIIGI+N S+S EI+ ++
Sbjct: 78   LANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHI 137

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            + FNDIL SFEGEHPFHNYTIRSKYRKQ+P +   +                   L K R
Sbjct: 138  ANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESL---------------LKKGR 182

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
             +    +  S E+    +        +V+ E ++ +   NE +   +   S + + ARWL
Sbjct: 183  PSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDLNSVIPIQARWL 242

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            HEPD RD+++++HFR+I+ C CGKLE+ LGM+YVE+SI GESFMLHQIRKMVGTAVA+KR
Sbjct: 243  HEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKR 302

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEILK 579
             LLP D++ +SL KFSRIVLPLAPSEVL+L+GN F+LR  PG I RPE+  L+ES++ILK
Sbjct: 303  NLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLLESDDILK 362

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESFRIK 399
            +V++FY S MLPQ+S+FL+PSKSPW++W+  LDANTSIPD +LEEVR A KLWK  +  +
Sbjct: 363  AVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAWKLWKAQYDSR 422

Query: 398  T 396
            T
Sbjct: 423  T 423


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Solanum tuberosum]
          Length = 487

 Score =  496 bits (1276), Expect = e-137
 Identities = 249/421 (59%), Positives = 318/421 (75%), Gaps = 1/421 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE AIFKAGGIRDSN+G+L+KIGWARSSRTDKGVHSLATMISLKMEIP +AW+DDP GI 
Sbjct: 82   LEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIA 141

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN +N+ LP N++VFSILPS++ FDAR+EC  R+YSYL+PAEIIGI+N S+S EI+ ++
Sbjct: 142  LANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSTSSEIEYHI 201

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            + FNDIL SFEGEHPFHNYTIRSKYRKQ+P +   +                   L K R
Sbjct: 202  ANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNESL---------------LKKGR 246

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
             +    +  S E+    +        +V+ E ++ +   NE +   +   S + + ARWL
Sbjct: 247  PSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDLNSVIPIQARWL 306

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            HEPD RD+++++HFR+I+ C CGKLE+ LGM+YVE+SI GESFMLHQIRKMVGTAVA+KR
Sbjct: 307  HEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGTAVAIKR 366

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEILK 579
             LLP D++ +SL KFSRIVLPLAPSEVL+L+GN F+LR  PG I RPE+  L+ES++ILK
Sbjct: 367  NLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLLESDDILK 426

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESFRIK 399
            +V++FY S MLPQ+S+FL+PSKSPW++W+  LDANTSIPD +LEEVR A KLWK  +  +
Sbjct: 427  AVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAWKLWKAQYDSR 486

Query: 398  T 396
            T
Sbjct: 487  T 487


>ref|XP_007017040.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508787403|gb|EOY34659.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 507

 Score =  493 bits (1269), Expect = e-136
 Identities = 257/418 (61%), Positives = 311/418 (74%), Gaps = 4/418 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIFKAGGIRDSNYGDLHKI WARSSRTDKGVHSLATMI+LKMEIP++AWK+DP GI 
Sbjct: 89   LETAIFKAGGIRDSNYGDLHKIAWARSSRTDKGVHSLATMITLKMEIPEDAWKEDPNGIA 148

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LA  +N+YLP+++KVFSILPSQ+SFD R+EC +R+YSYLLPAEIIGI++  S  EI+ ++
Sbjct: 149  LAKCVNSYLPDSIKVFSILPSQKSFDPRRECNLRKYSYLLPAEIIGIKSHFSEAEINHHI 208

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXEL---V 1125
            S+FN IL  FEGEHPFHNYT R+KYR+Q P ++ ++                       V
Sbjct: 209  SDFNSILNCFEGEHPFHNYTQRAKYRRQIPPRQTARNGRVPKGAEAHDESSTSELEESDV 268

Query: 1124 KNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHA 945
            +    I     L+ E  +     ++ DE  VD      ++ + +S        S + V A
Sbjct: 269  EEDPRIEETTTLNSEEKS-----TSFDEPRVDCCDGQGNSLQYQS--------SNVVVRA 315

Query: 944  RWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVA 765
            RWL+EPDE DRITASHFRKI+ CSCG+LE S+G  Y+EISI GESFMLHQIRKMVGTAVA
Sbjct: 316  RWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDYIEISIWGESFMLHQIRKMVGTAVA 375

Query: 764  VKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSP-GIARPEVKMLVESEE 588
            VKR L P D++ LSL KFSRIVLPLAPSEVLILRGN F LR+ P  I RPE+  +VESEE
Sbjct: 376  VKRNLFPRDILTLSLAKFSRIVLPLAPSEVLILRGNTFILRKMPSNITRPEMLTMVESEE 435

Query: 587  ILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKE 414
            ILK V++FY+SV+LPQVSKFL+PSKSPW +W+  LDANTS+PD EL+EVR A KLWKE
Sbjct: 436  ILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDANTSVPDAELDEVRTAWKLWKE 493


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
            lycopersicum]
          Length = 496

 Score =  492 bits (1267), Expect = e-136
 Identities = 249/432 (57%), Positives = 319/432 (73%), Gaps = 8/432 (1%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE AIFKAGGIR+SN+G+L+KIGWARSSRTDKGVHSLATMISLKMEIP +AW+DDP GI 
Sbjct: 78   LEKAIFKAGGIRESNFGNLYKIGWARSSRTDKGVHSLATMISLKMEIPADAWEDDPNGIT 137

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN +N+ LP N++VFSILPS++ FDAR+EC  R+YSYL+PAEIIGI+N S+S EI+ ++
Sbjct: 138  LANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIPAEIIGIKNDSASSEIEYHI 197

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            + FNDIL SFEGEHPFHNYTIRSKYRKQ+P +                       L+KN 
Sbjct: 198  ANFNDILNSFEGEHPFHNYTIRSKYRKQSPARN----------------------LLKND 235

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDER-------LVDTEKKHQDNFENESIPPDEGARSPL 957
              +      S E ++    +     R       +V+ E ++ +   N  +   +   S +
Sbjct: 236  SLLKKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEGNCNLKVSHSKDLNSVI 295

Query: 956  CVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVG 777
             + ARWLHEPD RD+++++HFR+I+ C CGKLE+ LGM+YVE+SI GESFMLHQIRKMVG
Sbjct: 296  PIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVG 355

Query: 776  TAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLV 600
            TAVA+KR LLP D + +SL KFSRIVLPLAPSEVL+L+GN F+LR  PG I RPE+  L+
Sbjct: 356  TAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLL 415

Query: 599  ESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLW 420
            ES++ILK+V++FY S +LPQ+S+FL+PSKSPW++W+  LDANTSIPD +LEEVR A KLW
Sbjct: 416  ESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVAWKLW 475

Query: 419  KESFRIKTNVPS 384
            K  +  +T  PS
Sbjct: 476  KAQYDSRTKFPS 487


>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X2
            [Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X3
            [Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
            putative tRNA pseudouridine synthase-like isoform X4
            [Glycine max]
          Length = 493

 Score =  484 bits (1247), Expect = e-134
 Identities = 252/430 (58%), Positives = 317/430 (73%), Gaps = 9/430 (2%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIFKAGGIR+SN+GDL KIGWARSSRTDKGVHSLAT+IS KMEIP+NAW  DP G G
Sbjct: 77   LETAIFKAGGIRESNFGDLQKIGWARSSRTDKGVHSLATIISFKMEIPENAWNGDPYGFG 136

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N+YLP ++KV SILPSQRSFD RKEC++R+YSYLLPAEIIGI++  S  E+D ++
Sbjct: 137  LANYVNSYLPFDIKVISILPSQRSFDPRKECILRKYSYLLPAEIIGIQSHFSD-EVDYHI 195

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEFNDIL  FEG HPFHNYT RSKYRKQ P ++ S +                    +  
Sbjct: 196  SEFNDILNVFEGIHPFHNYTARSKYRKQFPNRQSSSKS---------------GTSARES 240

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGAR--------SP 960
            ++  S  + S    N  +  + ++  +  ++K  + +   E +               S 
Sbjct: 241  LSYESECEYSDGEENSETDEAYTENIVCQSQKFSETHHFAEPVVGSSNKNGNGLHDQDSR 300

Query: 959  LCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMV 780
            L   ARWL+EPDE DR++ASHFRK++ CSCGKLE SLG +Y+EISI GESFMLHQIRKMV
Sbjct: 301  LVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRKMV 360

Query: 779  GTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKML 603
            GTAVAVKRK LP D+I+LSLT+FSRI+LPLAPSE LILRGN+FS+R  PG I RPE++ +
Sbjct: 361  GTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPGNITRPEMQTI 420

Query: 602  VESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKL 423
            V+SEEI K+V++FY SVMLPQVSK L+PS+SPW++WI  LDA+TSIP+ +L+EVR+A  L
Sbjct: 421  VKSEEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDEVRKAWNL 480

Query: 422  WKESFRIKTN 393
            +KE F   T+
Sbjct: 481  FKEKFETTTS 490


>ref|XP_007207376.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
            gi|462403018|gb|EMJ08575.1| hypothetical protein
            PRUPE_ppa004352mg [Prunus persica]
          Length = 515

 Score =  483 bits (1243), Expect = e-133
 Identities = 254/420 (60%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIF AGGIRDSN G+L+KI WARSSRTDKGVHSLATMIS KMEIP+ AW  DP GI 
Sbjct: 94   LETAIFNAGGIRDSNLGNLNKIAWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIA 153

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            L N IN YLP+N+KVFSILP+QRSFD RKEC +R YSYLLPA++IGI++  SS EID ++
Sbjct: 154  LVNHINYYLPHNIKVFSILPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSSAEIDYHI 213

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQR---RMXXXXXXXXXXXXXXXELV 1125
            S+FN IL  FEGEHPFHNYTIRSKYR++ P KK  +     +                 V
Sbjct: 214  SDFNSILNCFEGEHPFHNYTIRSKYRRKLPVKKSRRHGSVSITGRSTGEASASESEESDV 273

Query: 1124 KNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHA 945
                +  +  +   E +N  S  S++ E  +    + Q +  N     D+ A S   + A
Sbjct: 274  DENFDGTNTPESDAEVLNQNSSPSSNSEGNLRNACEKQGDGGN-----DQSAGS--VIRA 326

Query: 944  RWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVA 765
            RWL+EPDERDRI+ASHFRKI+ CSCGKLE+SLG  YVE+SI GESFMLHQIRKMVGTAVA
Sbjct: 327  RWLYEPDERDRISASHFRKIFLCSCGKLEKSLGHDYVELSISGESFMLHQIRKMVGTAVA 386

Query: 764  VKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEE 588
            +KRKLLP D++ LSL  FSRI+LPLAPSEVL LRGN+FS+R  PG + RPE+  +VES E
Sbjct: 387  IKRKLLPRDILTLSLAMFSRIILPLAPSEVLFLRGNRFSIRGRPGNVTRPEMMAMVESGE 446

Query: 587  ILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
            I+K+V+EFY SVMLP+VSKFL PS  PW +W+  LD NT IPD EL+EVR A K+WKE F
Sbjct: 447  IIKAVDEFYTSVMLPEVSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVRNAWKVWKEKF 506


>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria vesca
            subsp. vesca]
          Length = 509

 Score =  482 bits (1241), Expect = e-133
 Identities = 254/419 (60%), Positives = 310/419 (73%), Gaps = 3/419 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIFKAGGIR+SN+G+L+KI WARSSRTDKGVHSLATMISLKMEIP+NAW  DP GI 
Sbjct: 92   LETAIFKAGGIRESNFGNLNKISWARSSRTDKGVHSLATMISLKMEIPENAWDGDPYGIA 151

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            L N IN+YLP ++KVFS +P+QRSFD RKEC +R YSYLLPA++IGI++  S+ EI+ ++
Sbjct: 152  LVNHINSYLPRDIKVFSAVPAQRSFDPRKECNLRMYSYLLPADVIGIKSHFSAAEIEDHI 211

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDS-QRRMXXXXXXXXXXXXXXXELVKN 1119
            ++FNDIL +FEGEHPFHNYTIRSKYR + P KK    R M               E   +
Sbjct: 212  ADFNDILNAFEGEHPFHNYTIRSKYRMKLPGKKSPIYRNMSKTERSTVEASSSELEGSDD 271

Query: 1118 RVNIVSVLDLSGENVNHLSLLSAS-DERLVDTEKKHQDNFENESIPPDEGARSPLCVHAR 942
                        E +N  S +S++ +E L+   KK +D  + +S        +   V+A+
Sbjct: 272  EDKFKGRNSSETEVLNQNSSMSSNGNEILLHACKKQEDVLKEKS--------TDSVVYAK 323

Query: 941  WLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAV 762
            WL+EPDE DRI ASHFRKI+ CSCGKLE+SL   YVE+SI GESFMLHQIRKMVGTAVAV
Sbjct: 324  WLYEPDESDRIGASHFRKIFRCSCGKLEKSLTHEYVELSIWGESFMLHQIRKMVGTAVAV 383

Query: 761  KRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEI 585
            KRKLLP D++ LSL KFSRI+LPLAPSEVLILRGN+FS+R  PG + RPE+  +VESEE+
Sbjct: 384  KRKLLPRDILTLSLAKFSRIILPLAPSEVLILRGNRFSIRERPGNVKRPEMIAMVESEEV 443

Query: 584  LKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
            +K V+EF+ SVMLPQV+KFL PS  PW +WI  LD NT IPD EL+EVR A K+WKE F
Sbjct: 444  IKQVDEFFTSVMLPQVAKFLEPSGYPWQEWIENLDRNTGIPDRELDEVRNAWKVWKEKF 502


>ref|XP_007142071.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
            gi|561015204|gb|ESW14065.1| hypothetical protein
            PHAVU_008G250100g [Phaseolus vulgaris]
          Length = 507

 Score =  481 bits (1237), Expect = e-133
 Identities = 251/423 (59%), Positives = 310/423 (73%), Gaps = 1/423 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETA+FKAGGIR+SN+GDL KI WARSSRTDKGVHSLAT++S KMEIP+NAW  DP G G
Sbjct: 92   LETAVFKAGGIRESNFGDLQKIKWARSSRTDKGVHSLATIVSFKMEIPENAWNGDPYGFG 151

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N+YLP ++KV SILPSQRSFD RKEC  R+YSYLLPAEIIGI++ SS+ EID ++
Sbjct: 152  LANYVNSYLPFDIKVLSILPSQRSFDPRKECAWRKYSYLLPAEIIGIQSDSSNDEIDYHI 211

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEF+DIL  FEGEHPFHNYT R+KYRK  P K+ S + +                   + 
Sbjct: 212  SEFHDILNVFEGEHPFHNYTARAKYRKHFPNKQLSSKSVERLPPYESECEY------SDE 265

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
                 + +   EN+   S    S+            N     +P   G  S L   ARWL
Sbjct: 266  EENFEIDEAFTENIECRSQ-KCSETHNFGKPVVGSSNKNGNRLP---GQDSRLVARARWL 321

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            +EPDE DR++ASHFRK++ CSCGKLE SLG +Y+EISI GESFMLHQIRKMVGTAVAVKR
Sbjct: 322  YEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEISIQGESFMLHQIRKMVGTAVAVKR 381

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEILK 579
            K+LP D+I+LSL +FSRI+LPLAPSEVLILRGN+FS+R  PG + RPE++ +VESEEI K
Sbjct: 382  KVLPKDIIKLSLARFSRIILPLAPSEVLILRGNRFSIRTRPGNVTRPEMQAMVESEEINK 441

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESFRIK 399
            +V+ FY SVMLPQVSKFL+PS SPW +WI  LDA TSIP+ +L+EVR+A  L +E+   +
Sbjct: 442  AVDGFYTSVMLPQVSKFLDPSGSPWEEWIEKLDAYTSIPNDQLDEVRKAWNLLQENLESR 501

Query: 398  TNV 390
            T++
Sbjct: 502  TSI 504


>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
            gi|550325882|gb|EEE95884.2| hypothetical protein
            POPTR_0013s15030g [Populus trichocarpa]
          Length = 505

 Score =  476 bits (1224), Expect = e-131
 Identities = 248/425 (58%), Positives = 310/425 (72%), Gaps = 1/425 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE AI++AGGIR+SNYG+L+KI WARSSRTDKGVHSLAT I++KMEIP+NAWKDD  G+ 
Sbjct: 108  LERAIYEAGGIRESNYGNLNKISWARSSRTDKGVHSLATTITMKMEIPENAWKDDLYGMV 167

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LA  +N+YLP++++V SILP+Q+SFD R+EC +R+YSYLLPAE+IGI++  S  EID ++
Sbjct: 168  LAKHVNSYLPDSIRVLSILPAQKSFDPRRECDIRKYSYLLPAEVIGIKSHFSMAEIDDHI 227

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            S+FN+IL +FEG+HPFHNYT+RSKYR++ P K                        V  R
Sbjct: 228  SDFNNILNAFEGDHPFHNYTVRSKYRRKYPTKNGH---------------------VSKR 266

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
                     SG   NH+ L   S E  +           N  I  D+ +  PL   ARWL
Sbjct: 267  ARSSWGTSASGSEENHVELSQNSLESSICD--------LNGDILKDQSSNLPL--RARWL 316

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            HEPDE DRI A+HFRKI+ CSCGKLE+SLG  +VEISI GESFMLHQIRKMVGTAVAVKR
Sbjct: 317  HEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEISIWGESFMLHQIRKMVGTAVAVKR 376

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPGIA-RPEVKMLVESEEILK 579
            K+LP D+I LSLTKFSRIVLPLAPSEVLILRGN FSLR+  G   RPE++ +VESEEIL+
Sbjct: 377  KVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFSLRKKSGEGKRPEMETMVESEEILR 436

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESFRIK 399
            +VNEFY ++MLPQVSKFL+P    W +W+  LD  TSIPD +L+EVR A+K+W E+F+I+
Sbjct: 437  AVNEFYSTMMLPQVSKFLDPCMPLWKEWVENLDKYTSIPDAQLDEVRIARKVWMENFKIR 496

Query: 398  TNVPS 384
             ++ S
Sbjct: 497  KSIES 501


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
            gi|355517306|gb|AES98929.1| Pseudouridylate synthase
            [Medicago truncatula]
          Length = 501

 Score =  476 bits (1224), Expect = e-131
 Identities = 248/417 (59%), Positives = 314/417 (75%), Gaps = 1/417 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE+AIFKAGGIR+SN GDL KIGWARSSRTDKGVHSLATM++ KMEIP+N+W +DP G  
Sbjct: 89   LESAIFKAGGIRESNLGDLEKIGWARSSRTDKGVHSLATMVAFKMEIPENSWNEDPFGFA 148

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N+YLP ++KV SILP+QRSFD RKECV+R+YSYLLPA+IIGI++ SS+ EID ++
Sbjct: 149  LANYVNSYLPCDIKVISILPAQRSFDPRKECVLRKYSYLLPADIIGIQSHSSNDEIDYHM 208

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEFNDILK FEG HPFHNYT RS+YR+  PR+  S  +                E    +
Sbjct: 209  SEFNDILKEFEGGHPFHNYTSRSRYRRHIPRRP-SHSKCGEILSAYNSEQEDSDEEENFK 267

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
            V+     ++  +N    S  S S E +++T  K   N  ++S        S   V A+WL
Sbjct: 268  VDEALTGNIECQNQKS-SGTSDSCEPVIETGNK--GNLHDQS--------SSSVVRAKWL 316

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            +EPDE DR+ ASHFR+++ CS GKLE+S+G  Y+EI I GESFMLHQIRKMV TAVAVKR
Sbjct: 317  YEPDEADRLNASHFRRVFRCSSGKLEKSMGHSYIEIYIEGESFMLHQIRKMVATAVAVKR 376

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEILK 579
            KLLP D+I LSL+KFSRI+LPLAPSEVL+LRGN FS+R  PG + RPE++ +VESEEI K
Sbjct: 377  KLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSFSMRTKPGNVTRPEMQTIVESEEINK 436

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
             V++FY+SVMLPQVSKFL+PS+ PW +WI   DA+TSIP+ +L+EVR+A+ LWKE+F
Sbjct: 437  VVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIPNDQLDEVRKARNLWKENF 493


>ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial [Cicer
            arietinum]
          Length = 474

 Score =  475 bits (1222), Expect = e-131
 Identities = 244/417 (58%), Positives = 310/417 (74%), Gaps = 1/417 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LE+AIFKAGGIRDSN GDL KIGWARSSRTDKGVHSLAT++S KMEIP+N+W  DP G  
Sbjct: 61   LESAIFKAGGIRDSNLGDLEKIGWARSSRTDKGVHSLATILSFKMEIPENSWNGDPYGFS 120

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN++N+YLP ++KV SILPSQRSFD RKEC +R+YSYLLPAEIIGI++ SS+ EID +L
Sbjct: 121  LANYVNSYLPCDIKVISILPSQRSFDPRKECNLRKYSYLLPAEIIGIQSYSSNDEIDYHL 180

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEFNDILK FEG HPFHNYT RS+YRK   R++ SQ +                +    +
Sbjct: 181  SEFNDILKEFEGGHPFHNYTARSRYRKHF-RRRPSQSKSGESLSAYNSEYEDSDKEENFK 239

Query: 1115 VNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHARWL 936
            ++     ++  +N        + +   +++    +D+  ++S        S L V A+WL
Sbjct: 240  IDEAHTENIVCQNQKSSGTFDSCEH--LNSTGNEKDSLHDQS--------SRLVVRAKWL 289

Query: 935  HEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVAVKR 756
            +EPD+ DR+ ASHFR+++ C CGKLE SL  +Y+EI I GESFMLHQIRKMVGTAVAVKR
Sbjct: 290  YEPDDADRLNASHFRRVFKCCCGKLERSLRHNYIEIYIEGESFMLHQIRKMVGTAVAVKR 349

Query: 755  KLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEEILK 579
            KLLP D++ +SL+KFSRI+LPLAP EVLILRGN FS+R  PG + RPE++ +VESEEI K
Sbjct: 350  KLLPRDIVTMSLSKFSRIILPLAPPEVLILRGNSFSMRNKPGNVTRPEMQTIVESEEINK 409

Query: 578  SVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
             V++FY SVMLPQVSKFL+ SK PW +WI  LDA+TSIP+ +L+EVR+A+ LWKE+F
Sbjct: 410  VVDDFYTSVMLPQVSKFLDSSKVPWEEWIEKLDAHTSIPNDQLDEVRKARNLWKENF 466


>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
            [Citrus sinensis]
          Length = 539

 Score =  474 bits (1221), Expect = e-131
 Identities = 255/436 (58%), Positives = 308/436 (70%), Gaps = 12/436 (2%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETA+FKAGGIR+SNYG+L KI WARSSRTDKGVHSLATMI LKMEIP +AWKDDP GI 
Sbjct: 110  LETAVFKAGGIRESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGID 169

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LA  +N +LP N+KVFSILPSQRSFD R+EC +R+YSYLLPAE+IGI +  ++ EIDS++
Sbjct: 170  LAKRVNAHLPRNIKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHI 229

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYR----------KQAPRKKDSQ-RRMXXXXXXXXXX 1149
            S+FN IL  FEGEHPFHNYT RSKYR          K+A   KD+   R+          
Sbjct: 230  SDFNAILNEFEGEHPFHNYTERSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGEEDGF 289

Query: 1148 XXXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGA 969
                    +  + I   +    E  N  S++S            HQ++  N+     +  
Sbjct: 290  SKVEESDGEEDLGIGGEISSDDEKANQNSMVSG----------VHQEDCCNQHANGLKDQ 339

Query: 968  RSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIR 789
             S   + ARWL+E DE D+++ASHFRKI+ CSCGKLE+SLG  YVEISI GESFMLHQIR
Sbjct: 340  NSSSVIRARWLYETDEADKLSASHFRKIFSCSCGKLEKSLGFGYVEISISGESFMLHQIR 399

Query: 788  KMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPGIARPEVK 609
            KMVGTAVAVKRKLLP D++ LSL K SRIVLPLAPSEVL LR N FS+R  PG+ RPE++
Sbjct: 400  KMVGTAVAVKRKLLPRDILTLSLAKHSRIVLPLAPSEVLFLRANSFSVRTRPGVTRPEMQ 459

Query: 608  MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 429
             +VESEEILK V+EFY SVMLP+VSKFL+ +KSPW +WI  L+  TSIP+ +L+EVR A 
Sbjct: 460  TMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDEVRNAW 519

Query: 428  KLWKES-FRIKTNVPS 384
            +LWKE  F  KT V S
Sbjct: 520  QLWKEKRFEGKTIVES 535


>ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
            [Citrus sinensis] gi|568827612|ref|XP_006468145.1|
            PREDICTED: putative tRNA pseudouridine synthase-like
            isoform X2 [Citrus sinensis]
            gi|568827614|ref|XP_006468146.1| PREDICTED: putative tRNA
            pseudouridine synthase-like isoform X3 [Citrus sinensis]
          Length = 605

 Score =  474 bits (1221), Expect = e-131
 Identities = 255/436 (58%), Positives = 308/436 (70%), Gaps = 12/436 (2%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETA+FKAGGIR+SNYG+L KI WARSSRTDKGVHSLATMI LKMEIP +AWKDDP GI 
Sbjct: 176  LETAVFKAGGIRESNYGNLQKIAWARSSRTDKGVHSLATMICLKMEIPPDAWKDDPYGID 235

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LA  +N +LP N+KVFSILPSQRSFD R+EC +R+YSYLLPAE+IGI +  ++ EIDS++
Sbjct: 236  LAKRVNAHLPRNIKVFSILPSQRSFDPRRECNLRKYSYLLPAEVIGINSQLTAAEIDSHI 295

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYR----------KQAPRKKDSQ-RRMXXXXXXXXXX 1149
            S+FN IL  FEGEHPFHNYT RSKYR          K+A   KD+   R+          
Sbjct: 296  SDFNAILNEFEGEHPFHNYTERSKYRRKPHKTGCVSKRAKASKDAVFSRVEESEGEEDGF 355

Query: 1148 XXXXXELVKNRVNIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGA 969
                    +  + I   +    E  N  S++S            HQ++  N+     +  
Sbjct: 356  SKVEESDGEEDLGIGGEISSDDEKANQNSMVSG----------VHQEDCCNQHANGLKDQ 405

Query: 968  RSPLCVHARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIR 789
             S   + ARWL+E DE D+++ASHFRKI+ CSCGKLE+SLG  YVEISI GESFMLHQIR
Sbjct: 406  NSSSVIRARWLYETDEADKLSASHFRKIFSCSCGKLEKSLGFGYVEISISGESFMLHQIR 465

Query: 788  KMVGTAVAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPGIARPEVK 609
            KMVGTAVAVKRKLLP D++ LSL K SRIVLPLAPSEVL LR N FS+R  PG+ RPE++
Sbjct: 466  KMVGTAVAVKRKLLPRDILTLSLAKHSRIVLPLAPSEVLFLRANSFSVRTRPGVTRPEMQ 525

Query: 608  MLVESEEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQ 429
             +VESEEILK V+EFY SVMLP+VSKFL+ +KSPW +WI  L+  TSIP+ +L+EVR A 
Sbjct: 526  TMVESEEILKMVDEFYTSVMLPEVSKFLDATKSPWTEWIENLEKFTSIPNEQLDEVRNAW 585

Query: 428  KLWKES-FRIKTNVPS 384
            +LWKE  F  KT V S
Sbjct: 586  QLWKEKRFEGKTIVES 601


>ref|XP_004490688.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cicer
            arietinum]
          Length = 483

 Score =  472 bits (1215), Expect = e-130
 Identities = 252/425 (59%), Positives = 307/425 (72%), Gaps = 6/425 (1%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIFK GGIRDSN+GDL KI W RSSRTDKGVHSLATMIS KMEIP+NAWK D  GI 
Sbjct: 83   LETAIFKVGGIRDSNFGDLDKINWGRSSRTDKGVHSLATMISFKMEIPENAWKGDDYGIE 142

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN IN+YLPN+++VFSILPS + FD R+EC +R+YSYLLPA+IIGI++  S  EID ++
Sbjct: 143  LANHINSYLPNSIRVFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSEDEIDFHI 202

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEFN IL  FEG+HPFHNYT+RS YRK+   +K                       + NR
Sbjct: 203  SEFNSILGVFEGDHPFHNYTVRSIYRKKNHARKS-----------------PGNGGMSNR 245

Query: 1115 V---NIVSVLDLSGENVNHLSLLSASDERLVDTEKKH--QDNFENESIPPDEGARSPLCV 951
                +++S  D   E        S +D+ L D E+ H  Q++ E +S+    G  S L +
Sbjct: 246  TESSSLISACDSESEE-------SDADDSLSDGEQSHKPQESSEFDSL---NGQNSSLGI 295

Query: 950  HARWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTA 771
             ARWLHEPD+ DR+ ASHFRKI CCSCGKLE  LG ++VEI++ G+SFMLHQIRKMVGTA
Sbjct: 296  RARWLHEPDDADRLNASHFRKILCCSCGKLETLLGYNFVEINVWGDSFMLHQIRKMVGTA 355

Query: 770  VAVKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVES 594
            VAVKRKL+P D++ LSL KFSRIVLP+AP EVLILRGN F  R S G   RPE+  +VES
Sbjct: 356  VAVKRKLIPRDILSLSLVKFSRIVLPIAPPEVLILRGNTF--RSSSGNCTRPEMVSMVES 413

Query: 593  EEILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKE 414
            E+ILKSV+EFY SVMLP++SKFL+ SKSPW +W+  LD  +SIPD +LEEVR A + WKE
Sbjct: 414  EQILKSVDEFYSSVMLPELSKFLDSSKSPWANWVEKLDKYSSIPDAQLEEVREAWRTWKE 473

Query: 413  SFRIK 399
            +FR K
Sbjct: 474  NFRAK 478


>ref|XP_007142072.1| hypothetical protein PHAVU_008G250200g [Phaseolus vulgaris]
            gi|561015205|gb|ESW14066.1| hypothetical protein
            PHAVU_008G250200g [Phaseolus vulgaris]
          Length = 512

 Score =  460 bits (1184), Expect = e-127
 Identities = 240/424 (56%), Positives = 304/424 (71%), Gaps = 4/424 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIF AGG+RDSN+GDL+K+ W RSSRTDKGVHSLAT+IS KMEIP+NAWK D  GI 
Sbjct: 102  LETAIFTAGGMRDSNFGDLNKVKWGRSSRTDKGVHSLATVISFKMEIPENAWKGDDYGIA 161

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN IN+YLP  ++VFSILPS + FD R+EC +R+YSYLLPA+IIGI++  S  EID ++
Sbjct: 162  LANRINSYLPYTIRVFSILPSTKRFDPRRECNLRKYSYLLPADIIGIQSHFSKDEIDFHI 221

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEFN IL  FEGEHPFHNYT+RSKYRK+   ++ S                   +++ +R
Sbjct: 222  SEFNSILNVFEGEHPFHNYTVRSKYRKKYQVRQSS-----------------GSDVMSDR 264

Query: 1115 V---NIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHA 945
            +   ++ S  +   ++ +    +  S   L D E+ H+    +ES        S + V A
Sbjct: 265  LGSSSLASGFESESDDSDDYDFVDGSPTTLSDKEESHKPPESSES-NGLSSQNSNVVVRA 323

Query: 944  RWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVA 765
            RWLHEPDE+DR+ ASHFR ++ CSCGKLE S+G  YVEI I G+SFMLHQIRKMVGTAVA
Sbjct: 324  RWLHEPDEKDRLNASHFRNVFRCSCGKLETSMGYDYVEIHIWGDSFMLHQIRKMVGTAVA 383

Query: 764  VKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEE 588
            VKRKL+P DVI +SL KFSRIVLPLAP EVLILRGN F +R   G   R E+  +VESE+
Sbjct: 384  VKRKLIPKDVISVSLNKFSRIVLPLAPPEVLILRGNAFKMRSKAGNFTRQEMVSMVESEQ 443

Query: 587  ILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
            ILK+V+EFY  V+LP+VSKFL+ S SPW  W+  L+  +SIPD EL+EVR+A K W+E+F
Sbjct: 444  ILKAVDEFYTCVVLPEVSKFLDSSNSPWEKWVENLENYSSIPDGELDEVRKAWKTWRENF 503

Query: 407  RIKT 396
            R+K+
Sbjct: 504  RVKS 507


>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 516

 Score =  459 bits (1182), Expect = e-126
 Identities = 241/424 (56%), Positives = 303/424 (71%), Gaps = 4/424 (0%)
 Frame = -1

Query: 1655 LETAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKMEIPQNAWKDDPCGIG 1476
            LETAIF AGG+RDSN+GDL+K+ W RSSRTDKGVHSLATMI+ KMEIP+NAWK D  GI 
Sbjct: 107  LETAIFTAGGMRDSNFGDLNKVKWGRSSRTDKGVHSLATMIAFKMEIPENAWKGDDYGIV 166

Query: 1475 LANFINTYLPNNVKVFSILPSQRSFDARKECVVRRYSYLLPAEIIGIENGSSSVEIDSNL 1296
            LAN IN+YLPN ++VFSILPS + FD R+EC +R+YSYLLPA IIGI++  S  EID ++
Sbjct: 167  LANRINSYLPNTIRVFSILPSTKRFDPRRECNLRKYSYLLPAGIIGIQSHFSQDEIDFHI 226

Query: 1295 SEFNDILKSFEGEHPFHNYTIRSKYRKQAPRKKDSQRRMXXXXXXXXXXXXXXXELVKNR 1116
            SEFN IL  FEGEHPFHNYT+RSKYRK+   ++ S                   +++ +R
Sbjct: 227  SEFNSILNVFEGEHPFHNYTVRSKYRKKYQVRQSS-----------------GNDVMSDR 269

Query: 1115 V---NIVSVLDLSGENVNHLSLLSASDERLVDTEKKHQDNFENESIPPDEGARSPLCVHA 945
            +   ++ S  +   E  +    +S       D E+ H+    +ES        S + V A
Sbjct: 270  IGSSSLTSACESESEEGDDDDFVSGRPTTFSDKEESHKPPESSES-NGLSSQNSSVVVRA 328

Query: 944  RWLHEPDERDRITASHFRKIYCCSCGKLEESLGMHYVEISIVGESFMLHQIRKMVGTAVA 765
            +WL+EPDE DR+ ASHFRK++ CSCGKLE SLG  Y+E+ I G+SFMLHQIRKMVGTAVA
Sbjct: 329  KWLYEPDETDRLNASHFRKVFRCSCGKLETSLGYDYIEVHIWGDSFMLHQIRKMVGTAVA 388

Query: 764  VKRKLLPWDVIELSLTKFSRIVLPLAPSEVLILRGNQFSLRRSPG-IARPEVKMLVESEE 588
            VKR L+P D I LSL+KFSRIVLPLAP EVLILRGN F +R S G   R E+  +VESE+
Sbjct: 389  VKRNLIPRDAILLSLSKFSRIVLPLAPPEVLILRGNAFKMRASAGNFTRQEMVSMVESEQ 448

Query: 587  ILKSVNEFYKSVMLPQVSKFLNPSKSPWNDWIGTLDANTSIPDVELEEVRRAQKLWKESF 408
            IL++V+EFY SV+LP+VSKFL+ S SPW  W+  LD  +SIPD EL+EVR+A K WKE+F
Sbjct: 449  ILEAVDEFYTSVVLPEVSKFLDSSNSPWAKWVENLDKYSSIPDAELDEVRKAWKTWKENF 508

Query: 407  RIKT 396
            R+K+
Sbjct: 509  RLKS 512