BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00008326
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26820.3| unnamed protein product [Vitis vinifera]              141   8e-32
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   141   8e-32
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   141   8e-32
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   135   4e-30
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   135   4e-30
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   135   8e-30
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   134   1e-29
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   134   1e-29
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   134   1e-29
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de...   134   1e-29
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...   134   1e-29
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...   134   1e-29
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   133   2e-29
gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tu...   133   3e-29
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       132   4e-29
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   132   5e-29
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...   132   5e-29
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   132   5e-29
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...   131   8e-29
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      131   1e-28

>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  141 bits (356), Expect = 8e-32
 Identities = 67/105 (63%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWF--XX 138
            YD+KLGNLMDYYGIKTE+E++  SI+  SKSFDR+KDA+A+GLAVKSL+KE RTWF    
Sbjct: 781  YDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG 840

Query: 137  XXXXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                             YHVTYHP+YWG YNEGM RDHFLSFPWC
Sbjct: 841  SETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWC 885


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  141 bits (356), Expect = 8e-32
 Identities = 67/105 (63%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWF--XX 138
            YD+KLGNLMDYYGIKTE+E++  SI+  SKSFDR+KDA+A+GLAVKSL+KE RTWF    
Sbjct: 983  YDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG 1042

Query: 137  XXXXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                             YHVTYHP+YWG YNEGM RDHFLSFPWC
Sbjct: 1043 SETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWC 1087


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  141 bits (356), Expect = 8e-32
 Identities = 67/105 (63%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311 YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWF--XX 138
           YD+KLGNLMDYYGIKTE+E++  SI+  SKSFDR+KDA+A+GLAVKSL+KE RTWF    
Sbjct: 516 YDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG 575

Query: 137 XXXXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                            YHVTYHP+YWG YNEGM RDHFLSFPWC
Sbjct: 576 SETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWC 620


>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 292

 Score =  135 bits (341), Expect = 4e-30
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -1

Query: 311 YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
           YD+KLGNLMDYYGIKTEAE++  SI+  SKSF +++DA+A+G+AV++L+KE R WF    
Sbjct: 157 YDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKS 216

Query: 131 XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                          YHVTYHP+YWG YN GM RDHFLSFPWC
Sbjct: 217 GSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWC 259


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  135 bits (341), Expect = 4e-30
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD+KLGNLMDYYGIKTEAE++  SI+  SKSF +++DA+A+G+AV++L+KE R WF    
Sbjct: 997  YDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEKS 1056

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP+YWG YN GM RDHFLSFPWC
Sbjct: 1057 GSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWC 1099


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  135 bits (339), Expect = 8e-30
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 829  YDSKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 885

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 886  RHNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 928


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 981  YDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 1037

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 1038 RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1080


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 981  YDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 1037

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 1038 RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1080


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  134 bits (338), Expect = 1e-29
 Identities = 63/103 (61%), Positives = 74/103 (71%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+  SK+FDR+KDADA+G+AV+SL+KE RTWF    
Sbjct: 983  YDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDADAIGVAVRSLRKEARTWF---K 1039

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYH  YWG YNEG+KRDHF+SFPWC
Sbjct: 1040 RRSDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRDHFISFPWC 1082


>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1021

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 887  YDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 943

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 944  RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 986


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 1005 YDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 1061

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 1062 RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1104


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score =  134 bits (338), Expect = 1e-29
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 1003 YDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 1059

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 1060 RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1102


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  133 bits (335), Expect = 2e-29
 Identities = 63/105 (60%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWF--XX 138
            YD+KLGNLM+YYGIKTEAEL+  S +  SKSF +K+DA+A+G+AV+SLKKE R+WF    
Sbjct: 993  YDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKG 1052

Query: 137  XXXXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                             YHVTYH NYWG YNEGM RDHFLSFPWC
Sbjct: 1053 SGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWC 1097


>gb|ABI34378.1| RNA-directed RNA polymerase, putative [Solanum tuberosum]
          Length = 1050

 Score =  133 bits (334), Expect = 3e-29
 Identities = 60/103 (58%), Positives = 75/103 (72%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLM+YYGIKTEAE++   I+ TSK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 916  YDNKLGNLMEYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWF---K 972

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 973  RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1015


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  132 bits (333), Expect = 4e-29
 Identities = 61/103 (59%), Positives = 73/103 (70%)
 Frame = -1

Query: 311 YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
           YD KLGNLMDYYGIKTEAE +   I+  SK+FDR++DA+A+G+AV+SL+KE RTWF    
Sbjct: 673 YDKKLGNLMDYYGIKTEAETLSGGIMKASKTFDRRRDAEAIGVAVRSLRKEARTWF---K 729

Query: 131 XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                          YHV YHP YWG YNEG+KRDHF+SFPWC
Sbjct: 730 RRSDIDDLLAKASAWYHVAYHPTYWGCYNEGLKRDHFISFPWC 772


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  132 bits (332), Expect = 5e-29
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+  SK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 981  YDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWF---K 1037

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 1038 RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1080


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score =  132 bits (332), Expect = 5e-29
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+  SK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 1046 YDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWF---K 1102

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 1103 RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 1145


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  132 bits (332), Expect = 5e-29
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   I+  SK+FDR+KDA+A+ +AV++L+KE RTWF    
Sbjct: 829  YDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWF---K 885

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYHP YWG YN+G+KRDHF+SFPWC
Sbjct: 886  RRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWC 928


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score =  131 bits (330), Expect = 8e-29
 Identities = 60/103 (58%), Positives = 74/103 (71%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWFXXXX 132
            YD KLGNLMDYYGIKTEAE++   ++  SK+FDR+KDA+A+G+AV+SL+KE RTWF    
Sbjct: 910  YDNKLGNLMDYYGIKTEAEILSGGVMKASKTFDRRKDAEAIGVAVRSLRKEARTWF---K 966

Query: 131  XXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                           YHVTYH  YWG YNEG++RDHF+SFPWC
Sbjct: 967  KRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLRRDHFISFPWC 1009


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  131 bits (329), Expect = 1e-28
 Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311  YDFKLGNLMDYYGIKTEAELIGKSIISTSKSFDRKKDADAVGLAVKSLKKEVRTWF--XX 138
            YD+KLGNLMDYYG+KTEAE++G  I+  S+SF +K+DA+A+ +AV+SL+KE R+WF    
Sbjct: 971  YDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKG 1030

Query: 137  XXXXXXXXXXXXXXXXXYHVTYHPNYWGSYNEGMKRDHFLSFPWC 3
                             Y+VTYHP+YWG YNEGM RDHFLSFPWC
Sbjct: 1031 SELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWC 1075