BLASTX nr result
ID: Cocculus22_contig00007900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00007900
(354 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Popu... 147 2e-33
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 146 3e-33
ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma... 144 1e-32
ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prun... 144 1e-32
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 144 1e-32
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 144 1e-32
ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group] g... 144 2e-32
ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group] g... 144 2e-32
ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, I... 143 2e-32
gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subun... 143 2e-32
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 143 2e-32
ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, I... 143 2e-32
dbj|BAJ94836.1| predicted protein [Hordeum vulgare subsp. vulgar... 143 2e-32
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 143 2e-32
ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subun... 142 4e-32
ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutr... 142 6e-32
ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polyp... 141 8e-32
gb|EPS58145.1| hypothetical protein M569_16671 [Genlisea aurea] 141 8e-32
ref|XP_004489826.1| PREDICTED: DNA-directed RNA polymerases I, I... 141 1e-31
ref|XP_007136334.1| hypothetical protein PHAVU_009G036800g [Phas... 140 1e-31
>ref|XP_006381558.1| hypothetical protein POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 147 bits (370), Expect = 2e-33
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTEG 104
NYN+LEK+EG
Sbjct: 61 NYNTLEKSEG 70
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 146 bits (368), Expect = 3e-33
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKTE
Sbjct: 61 NYNTLEKTE 69
>ref|XP_007044696.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|508708631|gb|EOY00528.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 113
Score = 144 bits (364), Expect = 1e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 43 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 102
Query: 133 NYNSLEKTE 107
NYN+LEK+E
Sbjct: 103 NYNTLEKSE 111
>ref|XP_007225838.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
gi|462422774|gb|EMJ27037.1| hypothetical protein
PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 144 bits (364), Expect = 1e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEK+E
Sbjct: 61 NYNTLEKSE 69
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|590591838|ref|XP_007017127.1|
RNA polymerases N / 8 kDa subunit [Theobroma cacao]
gi|297739069|emb|CBI28558.3| unnamed protein product
[Vitis vinifera] gi|508787490|gb|EOY34746.1| RNA
polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 71
Score = 144 bits (364), Expect = 1e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEK+E
Sbjct: 61 NYNTLEKSE 69
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 144 bits (363), Expect = 1e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEK E
Sbjct: 61 NYNTLEKNE 69
>ref|NP_001067421.1| Os11g0194800 [Oryza sativa Japonica Group]
gi|62733950|gb|AAX96059.1| dna-directed rna polymerase
ii 8.2 kda polypeptide (ec 2.7.7.6)(rpb10) (rp10)
(abc10) [Oryza sativa Japonica Group]
gi|77549069|gb|ABA91866.1| DNA-directed RNA polymerase
II 8.2 kDa polypeptide, putative, expressed [Oryza
sativa Japonica Group] gi|113644643|dbj|BAF27784.1|
Os11g0194800 [Oryza sativa Japonica Group]
gi|215766304|dbj|BAG98532.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 74
Score = 144 bits (362), Expect = 2e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKTE
Sbjct: 61 NYNTLEKTE 69
>ref|NP_001066312.1| Os12g0180400 [Oryza sativa Japonica Group]
gi|113648819|dbj|BAF29331.1| Os12g0180400 [Oryza sativa
Japonica Group]
Length = 72
Score = 144 bits (362), Expect = 2e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKTE
Sbjct: 61 NYNTLEKTE 69
>ref|XP_004978899.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Setaria italica]
Length = 74
Score = 143 bits (361), Expect = 2e-32
Identities = 67/71 (94%), Positives = 68/71 (95%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTEGG 101
NYN+LEKTE G
Sbjct: 61 NYNTLEKTEDG 71
>gb|EMS59971.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Triticum urartu]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKTE
Sbjct: 61 NYNTLEKTE 69
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEK++
Sbjct: 61 NYNTLEKSD 69
>ref|XP_003578831.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Brachypodium distachyon]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKTE
Sbjct: 61 NYNTLEKTE 69
>dbj|BAJ94836.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520229|dbj|BAK04039.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKTE
Sbjct: 61 NYNTLEKTE 69
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 143 bits (361), Expect = 2e-32
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LE++E
Sbjct: 61 NYNTLERSE 69
>ref|XP_006662796.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Oryza brachyantha]
Length = 74
Score = 142 bits (359), Expect = 4e-32
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD YLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+LEKT+
Sbjct: 61 NYNTLEKTD 69
>ref|XP_006391977.1| hypothetical protein EUTSA_v10023792mg [Eutrema salsugineum]
gi|557088483|gb|ESQ29263.1| hypothetical protein
EUTSA_v10023792mg [Eutrema salsugineum]
Length = 71
Score = 142 bits (357), Expect = 6e-32
Identities = 64/69 (92%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDA+GLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAIGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN++EK++
Sbjct: 61 NYNTMEKSD 69
>ref|XP_002303467.2| DNA-directed RNA polymerase II 8.2 kDa polypeptide family protein
[Populus trichocarpa] gi|550342885|gb|EEE78446.2|
DNA-directed RNA polymerase II 8.2 kDa polypeptide
family protein [Populus trichocarpa]
Length = 74
Score = 141 bits (356), Expect = 8e-32
Identities = 68/73 (93%), Positives = 70/73 (95%), Gaps = 3/73 (4%)
Frame = -3
Query: 313 MIIPVRCFTCG---KVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 143
MIIPVRCFTCG KVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE
Sbjct: 1 MIIPVRCFTCGNCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIE 60
Query: 142 KLLNYNSLEKTEG 104
KLLNYN+LEK+EG
Sbjct: 61 KLLNYNTLEKSEG 73
>gb|EPS58145.1| hypothetical protein M569_16671 [Genlisea aurea]
Length = 71
Score = 141 bits (356), Expect = 8e-32
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIG+KWDTYLDLLQADYTEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGDKWDTYLDLLQADYTEGDALDALSLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTEGG 101
NYN+LEK++ G
Sbjct: 61 NYNTLEKSDSG 71
>ref|XP_004489826.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Cicer arietinum]
Length = 71
Score = 141 bits (355), Expect = 1e-31
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWD+YLD LQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDSYLDFLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYNSLEK +
Sbjct: 61 NYNSLEKVD 69
>ref|XP_007136334.1| hypothetical protein PHAVU_009G036800g [Phaseolus vulgaris]
gi|561009421|gb|ESW08328.1| hypothetical protein
PHAVU_009G036800g [Phaseolus vulgaris]
Length = 71
Score = 140 bits (354), Expect = 1e-31
Identities = 64/69 (92%), Positives = 69/69 (100%)
Frame = -3
Query: 313 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL 134
MIIPVRCFTCGKVIGNKWDTYLDLLQADY+EGDALDALGLVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 133 NYNSLEKTE 107
NYN+L+K++
Sbjct: 61 NYNALDKSD 69