BLASTX nr result
ID: Cocculus22_contig00007868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00007868
(925 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 488 e-135
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 470 e-130
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 469 e-130
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 469 e-130
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida] 469 e-130
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 468 e-129
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 467 e-129
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 467 e-129
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 467 e-129
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 462 e-128
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 461 e-127
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 460 e-127
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun... 459 e-127
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 457 e-126
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 457 e-126
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 455 e-125
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola... 455 e-125
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 454 e-125
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 453 e-125
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 453 e-125
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 488 bits (1256), Expect = e-135
Identities = 232/308 (75%), Positives = 268/308 (87%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMMLQTFRASKLLELR ++RI++PNGRSMMGCLDETRTL YGQVFVQ+S
Sbjct: 681 CGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQIS 740
Query: 742 CIGSKQ-YSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q + ++ LF+ +S QR IV+G V+VAKNPCLHPGDVRVL+AVN+P LHHMVDC
Sbjct: 741 GAGYRQLHGESSLFSSSRSRQRF-IVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDC 799
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG+RPHPNECSGSDLDGDIYFVCWD ELIPP+Q+ PMDYTPA S+ LDHDV IE+
Sbjct: 800 VVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIED 859
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+HT FAD+EP A S C++LA FS+AVDFPKTGVPA IP
Sbjct: 860 VEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPAEIP 919
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
PHL+VKEYPDFM+K DKP+Y+SQ VIGKLFR VKDIAP +CI FT EVA++ YD DME
Sbjct: 920 PHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDME 979
Query: 25 YDGFEDYI 2
DGFED+I
Sbjct: 980 VDGFEDHI 987
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 470 bits (1210), Expect = e-130
Identities = 227/308 (73%), Positives = 259/308 (84%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMMLQTFRA+KLLELR ++RI+VPNGRSMMGCLDETRTLEYG+VFVQ+S
Sbjct: 666 CGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQIS 725
Query: 742 CIGSKQ-YSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q + D+++F S I+EGK++VAKNPCLHPGDVRVL AVN+P LHHMVDC
Sbjct: 726 GTGGRQSFGDSLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDC 785
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD +LIPP+Q PMDYTPA + LDHDV IEE
Sbjct: 786 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEE 845
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+HT FADKE A + C ELA+LFS+AVDFPKTGVPA IP
Sbjct: 846 VEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIP 905
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
+L VKEYPDFM+K DKP+Y+SQ VIGKLFREVKDIAP I FT +VA+Q YD DME
Sbjct: 906 RNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDME 965
Query: 25 YDGFEDYI 2
GFEDY+
Sbjct: 966 VVGFEDYV 973
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 469 bits (1208), Expect = e-130
Identities = 224/308 (72%), Positives = 262/308 (85%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMMLQTFRASKLL+LR RSRI++PNGR+MMGCLDE+RTLEYGQVFVQ +
Sbjct: 663 CGYKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFT 722
Query: 742 CIGSKQYSDNML-FTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G ++SD++ F +S+ I++G V+VAKNPCLHPGD+RVL+AVN+ LHHMVDC
Sbjct: 723 GAGHGEFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRALHHMVDC 782
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPPRQ QPM+Y PA S+ LDHDVTIEE
Sbjct: 783 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEE 842
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+H FAD+EP MA S+ C +LA LFS+AVDFPKTGVPA IP
Sbjct: 843 VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIP 902
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
L KEYPDFMDK DK SY S+RVIGKLFR+VKD AP+A+ I FT +VA++ YD+DME
Sbjct: 903 SQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDADME 962
Query: 25 YDGFEDYI 2
DGFEDYI
Sbjct: 963 VDGFEDYI 970
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 469 bits (1207), Expect = e-130
Identities = 223/308 (72%), Positives = 258/308 (83%)
Frame = -1
Query: 925 TCGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQV 746
+CGY+PNAEPFLSMMLQ FRASKL ELR ++RI +P+GR+MMGCLDE RTLEYG+VFVQ
Sbjct: 677 SCGYQPNAEPFLSMMLQAFRASKLQELRTKTRISIPDGRAMMGCLDEMRTLEYGEVFVQF 736
Query: 745 SCIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
S I + + ++ S + IV G+V+VAKNPCLHPGDVRVL+AVN+P LHHMVDC
Sbjct: 737 SGITHRPFFEDSFMLGGTGSGQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPALHHMVDC 796
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP +Q +PMDY+PA + LDHDV IEE
Sbjct: 797 VVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVRIEE 856
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
V+EYFTNY++NDSLGIIAN+HTAFADKEP A S +CIELARLFS+AVDFPKTGVPA IP
Sbjct: 857 VQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPAVIP 916
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
L+VKEYPDFM+K++KP+Y+SQ VIGKLFREVKDIAP + FT EVA + YD DME
Sbjct: 917 QELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDPDME 976
Query: 25 YDGFEDYI 2
YDGFEDYI
Sbjct: 977 YDGFEDYI 984
>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
Length = 775
Score = 469 bits (1207), Expect = e-130
Identities = 222/308 (72%), Positives = 260/308 (84%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR R+RI++P GRSMMGCLDE+RTLEYGQVFVQ +
Sbjct: 356 CGYLPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPKGRSMMGCLDESRTLEYGQVFVQFT 415
Query: 742 CIGSKQ-YSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q Y ++ F S+ I++G V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 416 GAGGRQFYEESHHFNDSGSANYNFILKGNVVVAKNPCLHPGDIRVLKAVDVPALHHMVDC 475
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPPRQ QPMDYTPA S+ LDHDVTIEE
Sbjct: 476 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEE 535
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNYM+ND LG+IAN+H FAD+EP MA S+ CIELA+LFS+AVDFPKTGVPA IP
Sbjct: 536 VEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIP 595
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
L KEYPDFM+K DK +Y S++VIGKLFREVKD +A+ I FT +VA++ YD+D+E
Sbjct: 596 SQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVARRSYDTDLE 655
Query: 25 YDGFEDYI 2
DGFEDYI
Sbjct: 656 VDGFEDYI 663
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1119
Score = 468 bits (1203), Expect = e-129
Identities = 223/307 (72%), Positives = 256/307 (83%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKPN EPFLSMMLQTFRASKLLELR ++RI++P+GR+MMGCLDETRTLEYGQVFVQ S
Sbjct: 668 CGYKPNVEPFLSMMLQTFRASKLLELRTKTRIFIPDGRAMMGCLDETRTLEYGQVFVQFS 727
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
+Q D++ S I+EGKV+VAKNPCLHPGDVRVL+AVN+PDLHHMVDCV
Sbjct: 728 GKRRRQLFDDICI--HSSLDSCFIIEGKVVVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 785
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGDIYFVCWDPELIPP+Q QPMDYTPA + +D DVTIEEV
Sbjct: 786 VFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVTIEEV 845
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
EEYF NY++NDSLGIIAN+HT FAD + A S+ C++LA+LFS+AVDFPKTGVPA IPP
Sbjct: 846 EEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPAEIPP 905
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
L+ KEYPDFM+K DK +Y S VIG+LFREVKDIAP + I FT +VA +CYD DME
Sbjct: 906 ELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDMEV 965
Query: 22 DGFEDYI 2
DGFEDY+
Sbjct: 966 DGFEDYL 972
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 467 bits (1202), Expect = e-129
Identities = 224/308 (72%), Positives = 259/308 (84%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMMLQTFRA+KLLELR ++RI+VPNGRSMMGCLDETRTLEYG+VFVQ+S
Sbjct: 208 CGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQIS 267
Query: 742 CIGSKQ-YSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q + D+++F S I+EGKV+VAKNPCLHPGDVR+L AV++P LHHMVDC
Sbjct: 268 GTGGRQSFGDSLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDC 327
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG+RPHP+ECSGSDLDGDIYFVCWD +LIPPRQ PMDYTPA + LDHDV IEE
Sbjct: 328 VVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIEE 387
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY+ ND LGIIAN+HT FADKE A C ELA+LFS+A++FPKTGVPA IP
Sbjct: 388 VEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPAEIP 447
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
HLHVKEYPDFM+K +KP+Y+SQ VIGKLFREVKD+AP I FT +VA Q YD+DME
Sbjct: 448 FHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDIRSFTRDVAMQSYDADME 507
Query: 25 YDGFEDYI 2
DGFEDY+
Sbjct: 508 VDGFEDYV 515
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 467 bits (1201), Expect = e-129
Identities = 221/308 (71%), Positives = 260/308 (84%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR RSRI++PNGR+MMGCLDE+RTLEYGQVFVQ +
Sbjct: 666 CGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFT 725
Query: 742 CIGSKQ-YSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q Y ++ F S+ I+EG V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 726 GTGRRQFYEESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDC 785
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWDP+L+PPRQ QPMDYTPA S LDHDVTIEE
Sbjct: 786 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEE 845
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+H FAD+EP MA S+ C +LA+LFS+AVDFPKTGVPA IP
Sbjct: 846 VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIP 905
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
L KEYPDFM+K DKP+Y S++VIGKLF++VKD P+A+ I FT +VA++ YD DM
Sbjct: 906 SQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDGDMI 965
Query: 25 YDGFEDYI 2
+GFEDYI
Sbjct: 966 VNGFEDYI 973
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 467 bits (1201), Expect = e-129
Identities = 223/308 (72%), Positives = 259/308 (84%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMMLQTFRA+KLLELR ++RI+VPNGRSMMGCLDETRTLEYG+VFVQ+S
Sbjct: 664 CGYKPDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQIS 723
Query: 742 CIGSKQ-YSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q + D+++F S I+EGKV+VAKNPCLHPGDVR+L AV++P LHHMVDC
Sbjct: 724 GTGGRQSFGDSLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDC 783
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG+RPHP+ECSGSDLDGDIYFVCWD +LIPPRQ PMDYTPA + LDHDV IEE
Sbjct: 784 VVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIEE 843
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY+ ND LGIIAN+HT FADKE A C ELA+LFS+A++FPKTGVPA IP
Sbjct: 844 VEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPAEIP 903
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
HLHVKEYPDFM+K +KP+Y+SQ VIGKLFREVKD+AP + FT +VA Q YD+DME
Sbjct: 904 FHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDVRSFTRDVAMQSYDADME 963
Query: 25 YDGFEDYI 2
DGFEDY+
Sbjct: 964 VDGFEDYV 971
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 462 bits (1190), Expect = e-128
Identities = 218/307 (71%), Positives = 257/307 (83%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY+P+AEPFLSMMLQTFRASKLLELR ++RI++PNGRSMMGCLDETRTLE+GQVFV+ S
Sbjct: 677 CGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFS 736
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
+ D+ ++ + +++G V+VAKNPCLHPGD+R+L+AV++P LHHMVDCV
Sbjct: 737 GSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDCV 796
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP +Q PMDYTP + LDHDVTIEEV
Sbjct: 797 VFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEEV 856
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
EEYFTNY++NDSLG+IAN+HTA ADKE A S C+ELAR FS+AVDFPKTGVPA IP
Sbjct: 857 EEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIPS 916
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
+L +EYPDFM+K DKPSY+S+ VIGKLFREVKDIAP+ + I FT +VA+QCYD DME
Sbjct: 917 NLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEV 976
Query: 22 DGFEDYI 2
DGFEDYI
Sbjct: 977 DGFEDYI 983
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 461 bits (1186), Expect = e-127
Identities = 220/307 (71%), Positives = 256/307 (83%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY+P+ EP+LSMMLQTFRASKLLELR +SRI++PNGR+MMGCLDETRTLEYGQVFVQ+S
Sbjct: 675 CGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQIS 734
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
+ S++ F R + ++EG V VAKNPCLHPGDVRVL+AVNIP L+HMVDCV
Sbjct: 735 SGRHRNLSESFAFNRI-GREHHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPGLYHMVDCV 793
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP RQ PMDYTPA LD DVT E++
Sbjct: 794 VFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDVTTEDI 853
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
+EYF NYM+NDSLGIIAN+HTAFADKE A S+ C+ELA+LFSVAVDFPKTGVPA IP
Sbjct: 854 QEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPAIIPS 913
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
HL+VKE+PDFM+K D+PSY+S +VIGKLFR VKDIAP + I FT +VA++CYD DME
Sbjct: 914 HLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEV 973
Query: 22 DGFEDYI 2
+GFEDY+
Sbjct: 974 EGFEDYV 980
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 460 bits (1184), Expect = e-127
Identities = 219/308 (71%), Positives = 260/308 (84%), Gaps = 1/308 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR R+RI++PNGR+MMGCLDE+RTLEYGQVFVQ S
Sbjct: 665 CGYMPDAEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTLEYGQVFVQFS 724
Query: 742 CIGSKQY-SDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +Q+ ++ F S+ I++G V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 725 GAGRRQFFEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDC 784
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWDP+LIPPRQ Q MDYTPA + LDHDVTIEE
Sbjct: 785 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEE 844
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+H FAD+EP MA S+ C +LA+LFS+AVDFPKTGVPA IP
Sbjct: 845 VEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIP 904
Query: 205 PHLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDME 26
L KEYPDFM+K DKP+Y S++VIGKLF++VK+ P+A+ I FT +VA++ YDSDM
Sbjct: 905 SQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDSDMI 964
Query: 25 YDGFEDYI 2
DGFEDYI
Sbjct: 965 VDGFEDYI 972
>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
gi|462422197|gb|EMJ26460.1| hypothetical protein
PRUPE_ppa001524mg [Prunus persica]
Length = 808
Score = 459 bits (1182), Expect = e-127
Identities = 222/307 (72%), Positives = 254/307 (82%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+ EPF+SMMLQTFRASKLLELR ++RI +P+GR+MMGCLDETRTLEYG+VFVQ S
Sbjct: 363 CGYKPDVEPFISMMLQTFRASKLLELRTKTRILIPDGRAMMGCLDETRTLEYGEVFVQFS 422
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
G + S + I+EGKV+VAKNPCLHPGDVRVL+AV++P+L+HMVDCV
Sbjct: 423 --GKRHIGSE--------SNQQFIIEGKVVVAKNPCLHPGDVRVLKAVDVPELYHMVDCV 472
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP RQ QPMDYTPA ++ LDH VTIEEV
Sbjct: 473 VFPQKGPRPHPNECSGSDLDGDIYFVCWDDELIPSRQIQPMDYTPAPTIALDHAVTIEEV 532
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
EEYF NYM+NDSLGIIAN+HTAFAD++P A S CIELA+LFS+AVDFPKTGVPA IP
Sbjct: 533 EEYFVNYMVNDSLGIIANAHTAFADRQPSKAMSKPCIELAKLFSIAVDFPKTGVPAIIPQ 592
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
HL VKE+PDFM+K DKP+YQS VIG+LFREVKD+ P I F+ EVA+Q YD DME
Sbjct: 593 HLRVKEFPDFMEKPDKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDRDMEV 652
Query: 22 DGFEDYI 2
DGFEDYI
Sbjct: 653 DGFEDYI 659
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 457 bits (1177), Expect = e-126
Identities = 223/307 (72%), Positives = 254/307 (82%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMML+TFRASKLLELR ++RI+V GRSMMGCLDETRTL YGQVFVQ S
Sbjct: 670 CGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQFS 729
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
GS+ S+R IV+GKVIVAKNPCLHPGDVRVL+AVN+PDLHHMVDCV
Sbjct: 730 --GSR-------------SERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 774
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP +Q PMDY+PA++ LDH+VTIEE+
Sbjct: 775 VFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEI 834
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
EEYFTNY++NDSLGII+N+HTAFAD+EP A S C+ELA+LFS+AVDFPKTGVPA IP
Sbjct: 835 EEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQ 894
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
L VKEYPDFM+K DKPSYQS VIGKLFREVK++AP I T E ++ YD DME
Sbjct: 895 ELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEV 954
Query: 22 DGFEDYI 2
+GFEDYI
Sbjct: 955 EGFEDYI 961
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 457 bits (1177), Expect = e-126
Identities = 223/307 (72%), Positives = 254/307 (82%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGYKP+AEPFLSMML+TFRASKLLELR ++RI+V GRSMMGCLDETRTL YGQVFVQ S
Sbjct: 670 CGYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQFS 729
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
GS+ S+R IV+GKVIVAKNPCLHPGDVRVL+AVN+PDLHHMVDCV
Sbjct: 730 --GSR-------------SERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 774
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP +Q PMDY+PA++ LDH+VTIEE+
Sbjct: 775 VFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEI 834
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
EEYFTNY++NDSLGII+N+HTAFAD+EPG A S C+ELA+LFS+AVDFPKTGVPA IP
Sbjct: 835 EEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQ 894
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
L VKE+PDFM+K DKPSYQS VIGKLFREVK++AP I T E K+ YD DME
Sbjct: 895 ELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEV 954
Query: 22 DGFEDYI 2
+GF DYI
Sbjct: 955 EGFVDYI 961
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 455 bits (1171), Expect = e-125
Identities = 218/309 (70%), Positives = 262/309 (84%), Gaps = 2/309 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR RSRI++PNGR+MMGCLDE+RTLEYGQVFVQ +
Sbjct: 663 CGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFT 722
Query: 742 CIGSKQYSDNML-FTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +++S+++ F +S+ I++G V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 723 GAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDC 782
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPPRQ Q M+Y PA S+ LDH+VTIEE
Sbjct: 783 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEE 842
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+H FAD+EP MA S+ C +LA LFS+AVDFPKTGVPA IP
Sbjct: 843 VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIP 902
Query: 205 PHLHVKEYPDFMDK-IDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDM 29
L KEYPDFMDK DK +Y S+RVIGKLFR+VKD AP+A+ I FT +VA++ YD+D+
Sbjct: 903 SQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADL 962
Query: 28 EYDGFEDYI 2
E DGFEDYI
Sbjct: 963 EVDGFEDYI 971
>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 455 bits (1171), Expect = e-125
Identities = 218/309 (70%), Positives = 262/309 (84%), Gaps = 2/309 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR RSRI++PNGR+MMGCLDE+RTLEYGQVFVQ +
Sbjct: 511 CGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFT 570
Query: 742 CIGSKQYSDNML-FTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +++S+++ F +S+ I++G V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 571 GAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDC 630
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPPRQ Q M+Y PA S+ LDH+VTIEE
Sbjct: 631 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEE 690
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+H FAD+EP MA S+ C +LA LFS+AVDFPKTGVPA IP
Sbjct: 691 VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIP 750
Query: 205 PHLHVKEYPDFMDK-IDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDM 29
L KEYPDFMDK DK +Y S+RVIGKLFR+VKD AP+A+ I FT +VA++ YD+D+
Sbjct: 751 SQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADL 810
Query: 28 EYDGFEDYI 2
E DGFEDYI
Sbjct: 811 EVDGFEDYI 819
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 454 bits (1167), Expect = e-125
Identities = 217/309 (70%), Positives = 261/309 (84%), Gaps = 2/309 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR RSRI++PNGR+MMGCLDE+RTLEYGQVFVQ +
Sbjct: 663 CGYMPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFT 722
Query: 742 CIGSKQYSDNML-FTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +++S+++ F +S+ I++G V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 723 GSGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDC 782
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPPRQ Q M+Y PA S+ LDHDVTIEE
Sbjct: 783 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEE 842
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGIIAN+H FAD+EP MA S+ C +LA LFS+AVDFPKTGVPA IP
Sbjct: 843 VEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIP 902
Query: 205 PHLHVKEYPDFMDK-IDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDM 29
L KEYPDFMDK DK +Y S+RVIGKL+R+VKD AP+A+ FT +VA++ YD+D+
Sbjct: 903 SQLRPKEYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADL 962
Query: 28 EYDGFEDYI 2
E DGFEDYI
Sbjct: 963 EVDGFEDYI 971
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 453 bits (1165), Expect = e-125
Identities = 223/307 (72%), Positives = 253/307 (82%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY+P+AEPFLSMMLQTFRASKLLELR +SRI+V NGRSMMGCLDETRTL+YGQVFVQVS
Sbjct: 670 CGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSMMGCLDETRTLDYGQVFVQVS 729
Query: 742 CIGSKQYSDNMLFTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDCV 563
GS+ S++ IV+GKV+VAKNPCLHPGDVRVL AVN+PDLHHMVDCV
Sbjct: 730 --GSR-------------SEQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCV 774
Query: 562 VFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEEV 383
VFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP +Q PMDY+PA + L+H+VTIEEV
Sbjct: 775 VFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEV 834
Query: 382 EEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIPP 203
EEYFTNY++NDSLGIIAN+HT FAD+EP A S+ C LA+LFS+AVDFPKTGVPA IP
Sbjct: 835 EEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQ 894
Query: 202 HLHVKEYPDFMDKIDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDMEY 23
L VKEYPDFM+K DKP+YQS VIGKLFREVKD+AP I T E ++ YD DME
Sbjct: 895 ELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEV 954
Query: 22 DGFEDYI 2
DG+EDY+
Sbjct: 955 DGYEDYV 961
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 453 bits (1165), Expect = e-125
Identities = 216/309 (69%), Positives = 261/309 (84%), Gaps = 2/309 (0%)
Frame = -1
Query: 922 CGYKPNAEPFLSMMLQTFRASKLLELRNRSRIYVPNGRSMMGCLDETRTLEYGQVFVQVS 743
CGY P+AEPFLSMMLQTFRASKLL+LR +SRI++PNGR+MMGCLDE+RTLEYGQVFVQ +
Sbjct: 511 CGYMPDAEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFT 570
Query: 742 CIGSKQYSDNML-FTRKQSSQRTSIVEGKVIVAKNPCLHPGDVRVLQAVNIPDLHHMVDC 566
G +++S+++ F +S+ I++G V+VAKNPCLHPGD+RVL+AV++P LHHMVDC
Sbjct: 571 GAGHREFSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDC 630
Query: 565 VVFPQKGIRPHPNECSGSDLDGDIYFVCWDPELIPPRQNQPMDYTPATSVHLDHDVTIEE 386
VVFPQKG RPHPNECSGSDLDGDIYFVCWD ++IPPRQ QPM+Y PA S+ LDHDVTIEE
Sbjct: 631 VVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEE 690
Query: 385 VEEYFTNYMLNDSLGIIANSHTAFADKEPGMAESNACIELARLFSVAVDFPKTGVPAAIP 206
VEEYFTNY++NDSLGII+N+H FAD+EP MA S+ C +LA L S+AVDFPKTGVPA IP
Sbjct: 691 VEEYFTNYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIP 750
Query: 205 PHLHVKEYPDFMDK-IDKPSYQSQRVIGKLFREVKDIAPKANCIPKFTWEVAKQCYDSDM 29
L KEYPDFMDK DK +Y S+RVIGKLFR+VKD AP+A+ FT +VA++ YD+D+
Sbjct: 751 SQLRPKEYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSTAIFTRDVARRSYDADL 810
Query: 28 EYDGFEDYI 2
E DGFEDYI
Sbjct: 811 EVDGFEDYI 819