BLASTX nr result
ID: Cocculus22_contig00007521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00007521
(669 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323670.2| hypothetical protein POPTR_0016s14370g [Popu... 99 1e-18
ref|XP_007033528.1| Pentatricopeptide repeat superfamily protein... 91 3e-16
gb|EXC23833.1| hypothetical protein L484_006096 [Morus notabilis] 90 6e-16
ref|XP_006842489.1| hypothetical protein AMTR_s00077p00087500 [A... 86 1e-14
ref|XP_006587922.1| PREDICTED: pentatricopeptide repeat-containi... 80 8e-13
ref|XP_004305082.1| PREDICTED: pentatricopeptide repeat-containi... 80 8e-13
ref|XP_006481194.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-12
ref|XP_006429582.1| hypothetical protein CICLE_v10013314mg, part... 79 1e-12
ref|XP_004246986.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-12
gb|ABR16388.1| unknown [Picea sitchensis] 77 4e-12
ref|XP_007140083.1| hypothetical protein PHAVU_008G082800g [Phas... 75 2e-11
gb|EYU42022.1| hypothetical protein MIMGU_mgv1a018881mg, partial... 74 3e-11
ref|XP_007206949.1| hypothetical protein PRUPE_ppb018157mg [Prun... 74 5e-11
ref|XP_006846521.1| hypothetical protein AMTR_s00018p00185360 [A... 67 5e-09
ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containi... 67 7e-09
gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protei... 65 1e-08
ref|NP_176481.2| pentatricopeptide repeat protein RPF3 [Arabidop... 65 1e-08
ref|NP_176501.1| transacting siRNA generating locus [Arabidopsis... 65 1e-08
ref|XP_007216273.1| hypothetical protein PRUPE_ppa017372mg, part... 65 2e-08
ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
>ref|XP_002323670.2| hypothetical protein POPTR_0016s14370g [Populus trichocarpa]
gi|550321496|gb|EEF05431.2| hypothetical protein
POPTR_0016s14370g [Populus trichocarpa]
Length = 424
Score = 99.0 bits (245), Expect = 1e-18
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A NL++M+R+GY PRLIT+N +IRALC G VDKA +L M E + +PS++SY LLI
Sbjct: 334 AFINLHQMVRLGYIPRLITINNVIRALCVGGKVDKAFYVLVLMYENSKIPSRMSYDLLIH 393
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPRK 396
E +++ R L A VYGAAL RGVVPH +PR+
Sbjct: 394 ELNRQERTLGACNVYGAALVRGVVPHKKPRR 424
>ref|XP_007033528.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508712557|gb|EOY04454.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 523
Score = 90.9 bits (224), Expect = 3e-16
Identities = 44/92 (47%), Positives = 64/92 (69%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ +L +M+R+GY PR IT N +I+ALC +G + +A +L M E +PS+ SY +L+
Sbjct: 417 ALDHLQQMIRMGYIPRTITFNNVIQALCTEGKIREALVVLVIMYESGKIPSRTSYDILVK 476
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPRKK 393
EF+ +GR L A VYGAALK+GVVPH P ++
Sbjct: 477 EFNHQGRLLGASNVYGAALKQGVVPHRIPLRR 508
>gb|EXC23833.1| hypothetical protein L484_006096 [Morus notabilis]
Length = 618
Score = 90.1 bits (222), Expect = 6e-16
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = -2
Query: 656 LYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEFSQ 477
L +M+R+GY PR++T N +IRALC + V +A +L +NE +PS+ Y+LLIDE +Q
Sbjct: 532 LQKMIRMGYSPRMVTFNGVIRALCLEEKVIEALSILVLLNEEGRIPSRTCYNLLIDELNQ 591
Query: 476 KGRFLEAGKVYGAALKRGVVPHCQP 402
G L A VYGAALKRGV+P P
Sbjct: 592 HGSLLGASNVYGAALKRGVIPTMMP 616
>ref|XP_006842489.1| hypothetical protein AMTR_s00077p00087500 [Amborella trichopoda]
gi|548844575|gb|ERN04164.1| hypothetical protein
AMTR_s00077p00087500 [Amborella trichopoda]
Length = 334
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/93 (47%), Positives = 60/93 (64%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A++ L EM+ G+ P+ +T N LI+ LC G VD A +L M E PSK +Y++LI
Sbjct: 230 ALSILTEMIENGHPPKRMTYNTLIKGLCSKGRVDDAMDVLKLMFERETSPSKAAYNILIR 289
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPRKKL 390
EF+Q GR +A ++Y ALKRGVVPH QP + L
Sbjct: 290 EFNQSGRVFDASRLYAKALKRGVVPHQQPAEIL 322
>ref|XP_006587922.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Glycine max]
Length = 507
Score = 79.7 bits (195), Expect = 8e-13
Identities = 38/89 (42%), Positives = 59/89 (66%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ANLYEM+R+GY P +I + +I+ LC +G VD A L ++ VP+++SY +LI
Sbjct: 409 ALANLYEMVRLGYSPEVIAFDKVIQGLCDEGRVDDAVSALVLLHANGGVPNRVSYDVLIK 468
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQP 402
E ++GR A ++ AA+K GVVP+ +P
Sbjct: 469 ELIEEGRLFCASNLFCAAVKLGVVPNREP 497
>ref|XP_004305082.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 509
Score = 79.7 bits (195), Expect = 8e-13
Identities = 40/91 (43%), Positives = 63/91 (69%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ NL +ML +GY PR+IT N +I++LC + + A +L + + V S++SY+LLI
Sbjct: 419 AMINLKQMLTVGYSPRMITFNNVIQSLCAEEKMIDALLVLGTAYKFDRVASRVSYNLLIQ 478
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPRK 396
+ +Q G LEA VYGAALKRG++P+ +P++
Sbjct: 479 KLNQHGSMLEACTVYGAALKRGLIPNKKPQQ 509
>ref|XP_006481194.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Citrus sinensis]
Length = 387
Score = 79.3 bits (194), Expect = 1e-12
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ +L+ + +G+ PR IT N +I+ALC +G +DKA LLF M E +PS+ SY +LI
Sbjct: 297 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 356
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPR 399
+ Q + +A +YGAALK+GV+P +P+
Sbjct: 357 KLDQLEKSYDACALYGAALKQGVIPQRKPQ 386
Score = 56.2 bits (134), Expect = 9e-06
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ L +M RIG KP + T N L++ LC G V++A +L + + P +Y+ ++D
Sbjct: 82 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 141
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPH 411
F + GR EA ++ A++RGV P+
Sbjct: 142 GFCKVGRSNEAMELLNEAIERGVTPN 167
>ref|XP_006429582.1| hypothetical protein CICLE_v10013314mg, partial [Citrus clementina]
gi|557531639|gb|ESR42822.1| hypothetical protein
CICLE_v10013314mg, partial [Citrus clementina]
Length = 438
Score = 79.3 bits (194), Expect = 1e-12
Identities = 39/90 (43%), Positives = 60/90 (66%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ +L+ + +G+ PR IT N +I+ALC +G +DKA LLF M E +PS+ SY +LI
Sbjct: 348 ALIHLHHAIEMGHIPRTITFNNVIQALCGEGKIDKALLLLFLMYEHAKIPSRTSYDMLIT 407
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPR 399
+ Q + +A +YGAALK+GV+P +P+
Sbjct: 408 KLDQLEKSYDACALYGAALKQGVIPQRKPQ 437
Score = 56.2 bits (134), Expect = 9e-06
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ L +M RIG KP + T N L++ LC G V++A +L + + P +Y+ ++D
Sbjct: 133 ALEVLDQMGRIGCKPNIQTYNCLLKGLCYVGRVEEAYEMLMNVKNDGLKPDVYTYTAVMD 192
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPH 411
F + GR EA ++ A++RGV P+
Sbjct: 193 GFCKVGRSNEAMELLNEAIERGVTPN 218
>ref|XP_004246986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Solanum lycopersicum]
Length = 461
Score = 79.0 bits (193), Expect = 1e-12
Identities = 42/89 (47%), Positives = 57/89 (64%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A+ NLYEM+RIGY P+ T + LIR LC +G V+KA + M + PSK+ ++LLI+
Sbjct: 362 ALENLYEMIRIGYSPKAFTFSNLIRVLCLEGEVEKALLVFVPMMKNGKSPSKVPFNLLIN 421
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQP 402
E +QK L A +YG ALK GVV +P
Sbjct: 422 ELNQKEMILNACYLYGVALKCGVVTRNKP 450
>gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 77.4 bits (189), Expect = 4e-12
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A A LYEM+ GY P L T N +I+ C+ G +D A +L FM E I P SY++LI
Sbjct: 587 AQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIK 646
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQP 402
EF +GR +A ++Y AL+RGVV + +P
Sbjct: 647 EFHNQGRTQDADQLYATALERGVVLNPKP 675
>ref|XP_007140083.1| hypothetical protein PHAVU_008G082800g [Phaseolus vulgaris]
gi|561013216|gb|ESW12077.1| hypothetical protein
PHAVU_008G082800g [Phaseolus vulgaris]
Length = 514
Score = 75.1 bits (183), Expect = 2e-11
Identities = 37/90 (41%), Positives = 57/90 (63%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
A A L EM+ +GY P ++T + +I LC +G VD A L ++ +PS+ SY +LI
Sbjct: 410 AFAALNEMVGLGYSPEVVTFDKVILGLCAEGRVDDAVSTLVLLHASGGIPSRFSYDVLIK 469
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPR 399
E +++G+ A ++GAALK GVVP+ +PR
Sbjct: 470 ELNKEGKLFCACNLFGAALKLGVVPNREPR 499
>gb|EYU42022.1| hypothetical protein MIMGU_mgv1a018881mg, partial [Mimulus
guttatus]
Length = 441
Score = 74.3 bits (181), Expect = 3e-11
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = -2
Query: 656 LYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEFSQ 477
L EM+ IGY P+ T N +I++LC G VD+A + M++ N P I ++ LI++ ++
Sbjct: 349 LNEMITIGYSPKTFTFNIVIKSLCGIGEVDRALAIFKLMHK-NRDPRGIPFNALINQLNR 407
Query: 476 KGRFLEAGKVYGAALKRGVVPHCQPRKKL 390
+GR LEA VY ALKRGVVP +P K L
Sbjct: 408 RGRLLEARFVYAVALKRGVVPKSKPSKYL 436
>ref|XP_007206949.1| hypothetical protein PRUPE_ppb018157mg [Prunus persica]
gi|462402591|gb|EMJ08148.1| hypothetical protein
PRUPE_ppb018157mg [Prunus persica]
Length = 412
Score = 73.6 bits (179), Expect = 5e-11
Identities = 40/91 (43%), Positives = 58/91 (63%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
AV L +M+ +GY P +IT N +I+ LC +G V +A +L M E + ISY LI
Sbjct: 322 AVFCLQQMIGMGYSPWIITFNNVIKTLCVEGKVTEALLVLSIMYEGGRGTNGISYKPLIH 381
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVPHCQPRK 396
+++G FL A VYGAALKRGV+P+ +P++
Sbjct: 382 GLNRRGSFLGACSVYGAALKRGVIPNTKPQQ 412
>ref|XP_006846521.1| hypothetical protein AMTR_s00018p00185360 [Amborella trichopoda]
gi|548849331|gb|ERN08196.1| hypothetical protein
AMTR_s00018p00185360 [Amborella trichopoda]
Length = 735
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = -2
Query: 653 YEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEFSQK 474
+EM+ G P IT NALI LCK+G +D+A L + M + P+K +Y+LL+DE
Sbjct: 615 FEMIESGLSPNEITYNALINGLCKEGRIDQAYSLFYEMEGKGLSPNKYTYTLLMDENCNM 674
Query: 473 GRFLEAGKVYGAALKRGVVP 414
G + EA ++Y L RG+ P
Sbjct: 675 GNWQEAIRLYAEMLGRGLEP 694
>ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like isoform X1 [Citrus sinensis]
gi|568836322|ref|XP_006472194.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like isoform X2 [Citrus sinensis]
Length = 595
Score = 66.6 bits (161), Expect = 7e-09
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = -2
Query: 668 AVANLYEMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLID 489
AVA EM+ G KP ++T NALI CK MV+KA L ++E + PS I+Y+ LID
Sbjct: 339 AVALRDEMMASGLKPNVVTYNALINGFCKKKMVEKARALFDDISEQGLSPSVITYNTLID 398
Query: 488 EFSQKGRFLEAGKVYGAALKRGVVP 414
+ ++GR +A + + L RGV+P
Sbjct: 399 AYCKEGRMEDAFAMRNSMLDRGVLP 423
>gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = -2
Query: 659 NLY-EMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEF 483
NL+ EM G +P ++T N+LIR LC G ASRLL M E I P+ +++S LID F
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319
Query: 482 SQKGRFLEAGKVYGAALKRGVVP 414
++G+ +EA K+Y +KR + P
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDP 342
>ref|NP_176481.2| pentatricopeptide repeat protein RPF3 [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = -2
Query: 659 NLY-EMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEF 483
NL+ EM G +P ++T N+LIR LC G ASRLL M E I P+ +++S LID F
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 482 SQKGRFLEAGKVYGAALKRGVVP 414
++G+ +EA K+Y +KR + P
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDP 358
>ref|NP_176501.1| transacting siRNA generating locus [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein;
64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis
thaliana] gi|23197834|gb|AAN15444.1| unknown protein
[Arabidopsis thaliana] gi|332195938|gb|AEE34059.1|
transacting siRNA generating locus [Arabidopsis
thaliana]
Length = 630
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = -2
Query: 659 NLY-EMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEF 483
NL+ EM G +P ++T N+LIR LC G ASRLL M E I P+ +++S LID F
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 482 SQKGRFLEAGKVYGAALKRGVVP 414
++G+ +EA K+Y +KR + P
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDP 359
>ref|XP_007216273.1| hypothetical protein PRUPE_ppa017372mg, partial [Prunus persica]
gi|462412423|gb|EMJ17472.1| hypothetical protein
PRUPE_ppa017372mg, partial [Prunus persica]
Length = 601
Score = 65.1 bits (157), Expect = 2e-08
Identities = 34/79 (43%), Positives = 45/79 (56%)
Frame = -2
Query: 650 EMLRIGYKPRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEFSQKG 471
EM RIG P + T N LI LCKDG VDK + L M E P ++Y+ LI + +KG
Sbjct: 217 EMGRIGIHPNVYTFNILINVLCKDGDVDKVNAFLEKMEEEGFDPDIVTYNTLISSYCRKG 276
Query: 470 RFLEAGKVYGAALKRGVVP 414
R +A +Y +RGV+P
Sbjct: 277 RLEDAFYLYKIMYRRGVMP 295
>ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Vitis vinifera]
Length = 498
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = -2
Query: 626 PRLITLNALIRALCKDGMVDKASRLLFFMNEVNIVPSKISYSLLIDEFSQKGRFLEAGKV 447
P +IT N L+ ALCK+GMVD+A LL +N+ P I+Y+++ID ++KG +A ++
Sbjct: 317 PDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMEL 376
Query: 446 YGAALKRGVVP 414
YG ++RG P
Sbjct: 377 YGEMIERGFAP 387