BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00007407
         (1502 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma ...   431   e-118
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i...   422   e-115
ref|XP_007144255.1| hypothetical protein PHAVU_007G141100g [Phas...   420   e-114
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   419   e-114
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              419   e-114
ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [...   418   e-114
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   417   e-114
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i...   416   e-113
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [...   414   e-113
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i...   412   e-112
gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]           408   e-111
ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutr...   397   e-108
ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Caps...   397   e-108
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab...   397   e-108
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu...   397   e-108
ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6...   397   e-108
ref|XP_002532622.1| Far upstream element-binding protein, putati...   397   e-108
ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]...   396   e-107
ref|XP_007218728.1| hypothetical protein PRUPE_ppa009068mg [Prun...   395   e-107
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1...   395   e-107

>ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
            gi|508726977|gb|EOY18874.1| Binding to TOMV RNA 1L
            isoform 2 [Theobroma cacao]
          Length = 334

 Score =  431 bits (1109), Expect = e-118
 Identities = 224/309 (72%), Positives = 257/309 (83%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P   KSP+S+  EK TYIRFLVSNAAAGSVIGKGGSTITEFQS+SGARIQLSRN EFF
Sbjct: 18   RSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFF 77

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGTSDRIIMISG   E++KA EL+L+KLL+E+++ED DDV+ R+KVRLIVPNSSC     
Sbjct: 78   PGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIG 137

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              GATIKSFIEDSQAGIKISPQD+N+ GLNDRLVTLTG+L+EQMRAI LILSKL ED HY
Sbjct: 138  KGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHY 197

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
             Q+M  PFSYAG+  SGF G PY Y++PSV    YN+++Y  NG+GG+FQN+K+DRSNS+
Sbjct: 198  LQAMHAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPSNGAGGKFQNHKEDRSNSV 257

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGVAD HI        R+IMEISQ SGARIKISDRGDFMSGT+DRKVTITGSQ AIR A
Sbjct: 258  TIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQA 317

Query: 444  ESMILQKVA 418
            ESMI+QKVA
Sbjct: 318  ESMIMQKVA 326


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
          Length = 337

 Score =  422 bits (1086), Expect = e-115
 Identities = 219/308 (71%), Positives = 254/308 (82%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1326 KSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDR 1147
            KSPS D +EK TYIRFLVSN+AAGSVIGKGGSTIT+FQS+SGARIQLSRN EFFPGT+DR
Sbjct: 25   KSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84

Query: 1146 IIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGATI 967
            IIM+SG   EI +A EL+LSKLLSE+H ED +D + ++KVRL+VPN SC       GATI
Sbjct: 85   IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATI 144

Query: 966  KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 787
            +SFIEDSQAGIKISPQD+NY G NDRLVTLTGS +EQMRAI LI+SKL ED HY+QSM+ 
Sbjct: 145  RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNS 204

Query: 786  PFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNG-SGGRFQNNKDDRSNSMIIGVA 610
            PFSY GV  SG+ G PY Y++PSV   AYNA+NY PNG +GG+ QN+K++RSNS+ +GVA
Sbjct: 205  PFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVA 264

Query: 609  DEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIL 430
            DEHI        R+IMEISQASGARIKISDRGD++SGT+DRKVTITGSQ AIR AESMIL
Sbjct: 265  DEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMIL 324

Query: 429  QKVASVRE 406
            QKVA   E
Sbjct: 325  QKVAYATE 332


>ref|XP_007144255.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
            gi|561017445|gb|ESW16249.1| hypothetical protein
            PHAVU_007G141100g [Phaseolus vulgaris]
          Length = 335

 Score =  420 bits (1079), Expect = e-114
 Identities = 217/307 (70%), Positives = 252/307 (82%)
 Frame = -3

Query: 1326 KSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDR 1147
            KSPS D +EK TYIRFLVSN+AAGSVIGKGGSTITEFQS+SGARIQLSRN EFFPGT+DR
Sbjct: 25   KSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTTDR 84

Query: 1146 IIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGATI 967
            IIM+SG   EI+ A  L+LSKLLSE+H ED ++ + ++KVRLIVPN SC       GATI
Sbjct: 85   IIMVSGAINEILTAVGLILSKLLSELHTEDDNEAEPKTKVRLIVPNGSCGGIIGKGGATI 144

Query: 966  KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 787
            +SFIEDSQAGIKISPQD+NY G NDRLVTLTG+LEEQ+RAI LI+SKL ED  YSQSM+ 
Sbjct: 145  RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGTLEEQIRAIELIVSKLAEDPQYSQSMNS 204

Query: 786  PFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSMIIGVAD 607
            PFSY GV  SG+ G PY Y++PSV   AYNA+NY PNG+G +FQN+K++RSNSM +GVAD
Sbjct: 205  PFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAGAKFQNSKEERSNSMTMGVAD 264

Query: 606  EHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMILQ 427
            EHI        R+I+EISQ SGARIKISDRGD++SGT+DRKVTITG+Q AIR AESMILQ
Sbjct: 265  EHIGLVVGRGGRNIIEISQVSGARIKISDRGDYISGTTDRKVTITGAQRAIRTAESMILQ 324

Query: 426  KVASVRE 406
            KVA   E
Sbjct: 325  KVAYATE 331


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  419 bits (1078), Expect = e-114
 Identities = 226/316 (71%), Positives = 251/316 (79%)
 Frame = -3

Query: 1353 VAPKRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQ 1174
            V PKR    +SP+SD  EK+TYIRFLVSNAAAGSVIGKGGSTI +FQS+SGARIQLSRN 
Sbjct: 14   VPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNH 73

Query: 1173 EFFPGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXX 994
            EFFPGTSDRIIMISG   EI+KA EL+L+KLLSE+H EDGD+ D RSKVRLIVPNSSC  
Sbjct: 74   EFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGG 133

Query: 993  XXXXXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMED 814
                 G+TIKSFIEDSQA IKISPQD+NY+GL DRLVTL GSLEEQMRAI LILSKL ED
Sbjct: 134  IIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTED 193

Query: 813  SHYSQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRS 634
             HY+Q M+ PFSY                     A AYN++NYGPNG+GG+FQNNK+DRS
Sbjct: 194  PHYTQFMNAPFSY---------------------AAAYNSMNYGPNGAGGKFQNNKEDRS 232

Query: 633  NSMIIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAI 454
            NS+ IGVADEHI        R+IM+ISQASGARIKISDRGDFMSGT+DRKVTITGSQ AI
Sbjct: 233  NSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAI 292

Query: 453  RAAESMILQKVASVRE 406
            RAAESMI+QKVAS  E
Sbjct: 293  RAAESMIMQKVASASE 308


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  419 bits (1078), Expect = e-114
 Identities = 226/316 (71%), Positives = 251/316 (79%)
 Frame = -3

Query: 1353 VAPKRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQ 1174
            V PKR    +SP+SD  EK+TYIRFLVSNAAAGSVIGKGGSTI +FQS+SGARIQLSRN 
Sbjct: 62   VPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNH 121

Query: 1173 EFFPGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXX 994
            EFFPGTSDRIIMISG   EI+KA EL+L+KLLSE+H EDGD+ D RSKVRLIVPNSSC  
Sbjct: 122  EFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGG 181

Query: 993  XXXXXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMED 814
                 G+TIKSFIEDSQA IKISPQD+NY+GL DRLVTL GSLEEQMRAI LILSKL ED
Sbjct: 182  IIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTED 241

Query: 813  SHYSQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRS 634
             HY+Q M+ PFSY                     A AYN++NYGPNG+GG+FQNNK+DRS
Sbjct: 242  PHYTQFMNAPFSY---------------------AAAYNSMNYGPNGAGGKFQNNKEDRS 280

Query: 633  NSMIIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAI 454
            NS+ IGVADEHI        R+IM+ISQASGARIKISDRGDFMSGT+DRKVTITGSQ AI
Sbjct: 281  NSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAI 340

Query: 453  RAAESMILQKVASVRE 406
            RAAESMI+QKVAS  E
Sbjct: 341  RAAESMIMQKVASASE 356


>ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [Fragaria vesca subsp.
            vesca]
          Length = 344

 Score =  418 bits (1074), Expect = e-114
 Identities = 221/322 (68%), Positives = 261/322 (81%), Gaps = 12/322 (3%)
 Frame = -3

Query: 1350 APKR---PGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSR 1180
            AP+R   P   KSP+SD  EK TY+RFLVSNAAAGSVIGKGG+TIT+FQS+SGARIQLSR
Sbjct: 14   APRRRSSPPPPKSPASDTTEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSR 73

Query: 1179 NQEFFPGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSC 1000
            N EFFPGT+DRIIMISG   EI+KA ELVL+KLL+E++ E+ +DV+ R+K+RLIVPNSSC
Sbjct: 74   NHEFFPGTTDRIIMISGTINEILKAVELVLAKLLNELYSEESEDVEPRTKLRLIVPNSSC 133

Query: 999  XXXXXXXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLM 820
                   G+TIKSFIE+SQAGIKISPQD+NY G+NDRLVTLTG+L+EQMRA  LILSKL 
Sbjct: 134  GGIIGKQGSTIKSFIEESQAGIKISPQDNNYFGVNDRLVTLTGTLDEQMRAADLILSKLS 193

Query: 819  EDSHYSQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYG-------PNGSGGR 661
            EDSHY+QSM+ PFSY GV  SGF G PY Y++PSV   AYNA++YG       PNG+ G+
Sbjct: 194  EDSHYTQSMNAPFSYPGVFFSGFHGIPYTYVLPSVSTAAYNAVSYGPPPPNGPPNGAAGK 253

Query: 660  FQNNKDDR--SNSMIIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDR 487
            FQNNK+DR  +NS+ IGVAD HI        R+IMEISQ SGARIKISDRGDFMSGT+DR
Sbjct: 254  FQNNKEDRNNNNSVTIGVADSHIGLVVGRGGRTIMEISQGSGARIKISDRGDFMSGTTDR 313

Query: 486  KVTITGSQAAIRAAESMILQKV 421
            KVTITGSQ +I+ AE+MI+QKV
Sbjct: 314  KVTITGSQRSIQVAETMIMQKV 335


>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  417 bits (1071), Expect = e-114
 Identities = 211/306 (68%), Positives = 251/306 (82%)
 Frame = -3

Query: 1323 SPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDRI 1144
            SPS D  EK TY+RFLVSN+AAGSVIGKGGSTIT+FQS+SGARIQLSRN EFFPGT+DRI
Sbjct: 26   SPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRI 85

Query: 1143 IMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGATIK 964
            IM+SG   E+++A EL+LSKLLSE+H ED +DV+ ++KVRLIVPN SC       GATI+
Sbjct: 86   IMVSGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIR 145

Query: 963  SFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSGP 784
            SFIE+SQAGIKISPQD++Y G NDR+VT+TG+L+EQMR I LI+SKL ED HYS SMS P
Sbjct: 146  SFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSP 205

Query: 783  FSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSMIIGVADE 604
            F+Y+G  VSG+ G PY Y++PSV   AYN +NY PNG+G +FQN+K+DRSNSM IGVADE
Sbjct: 206  FTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNSKEDRSNSMTIGVADE 265

Query: 603  HIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMILQK 424
            HI        R+I +ISQ SGA+IKISDRGD++SGT+DRKVTITGSQ AIR AESMILQK
Sbjct: 266  HIGLVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQK 325

Query: 423  VASVRE 406
            VA   E
Sbjct: 326  VAYATE 331


>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
            arietinum]
          Length = 337

 Score =  416 bits (1068), Expect = e-113
 Identities = 210/308 (68%), Positives = 256/308 (83%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1326 KSPSSDDK-EKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSD 1150
            KSPS DD  EK TY+RFLVSN+AAGSVIGKGGSTIT+FQS+SGARIQLSRN EFFPGT+D
Sbjct: 26   KSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTD 85

Query: 1149 RIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGAT 970
            RIIM+SG   EI++A EL+LSKLL+E+H ED +DV+ ++KVRLIVPN SC       GAT
Sbjct: 86   RIIMVSGAINEILRAVELILSKLLTELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGAT 145

Query: 969  IKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMS 790
            I+SFIEDSQAGIKISPQD++Y G NDR+V++TG+L+EQMRA+ LI+SKL ED HYSQSM+
Sbjct: 146  IRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPHYSQSMN 205

Query: 789  GPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSMIIGVA 610
             PFSY+GV V G+ G PY Y++PSV   AYN++NY PNG+ G+FQN+K++RSNSM IG+A
Sbjct: 206  SPFSYSGVYVPGYQGVPYTYVLPSVAPPAYNSVNYRPNGAAGKFQNSKEERSNSMTIGIA 265

Query: 609  DEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIL 430
            DEHI        R+I +I+Q SGA+IKISDRGD++SGT+DRKVTITGSQ AIR AESMI+
Sbjct: 266  DEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMIM 325

Query: 429  QKVASVRE 406
            QKVA   E
Sbjct: 326  QKVAYATE 333


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
          Length = 337

 Score =  414 bits (1064), Expect = e-113
 Identities = 214/308 (69%), Positives = 250/308 (81%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1326 KSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDR 1147
            K PS D +EK TYIRFLVSN+AAGSVIGKGGSTIT+FQS+SGARIQLSRN EFFPGT+DR
Sbjct: 25   KPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84

Query: 1146 IIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGATI 967
            IIM+SG   EI +A EL+LSKLLSE+H ED +D + ++KVRL+VPN SC       G TI
Sbjct: 85   IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTI 144

Query: 966  KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 787
            +SFIEDSQAGIKISPQD+NY G NDRLV LTG+ +EQMRAI LI+SKL ED HY+QSM+ 
Sbjct: 145  RSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSMNS 204

Query: 786  PFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNG-SGGRFQNNKDDRSNSMIIGVA 610
            PFSY GV  SG+ G PY Y++PSV   AYNA+NY PNG +GG+ QN+K++RSNS+ +GVA
Sbjct: 205  PFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGVA 264

Query: 609  DEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIL 430
            DEHI        R+IMEISQ SGARIKISDRGD++SGT+DRKVTITGSQ AIR AESMIL
Sbjct: 265  DEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMIL 324

Query: 429  QKVASVRE 406
            QKVA   E
Sbjct: 325  QKVAYATE 332


>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
          Length = 332

 Score =  412 bits (1059), Expect = e-112
 Identities = 216/308 (70%), Positives = 251/308 (81%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1326 KSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDR 1147
            KSPS D +EK TYIRFLVSN+AAGSVIGKGGSTIT+FQS+SGARIQLSRN EFFPGT+DR
Sbjct: 25   KSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDR 84

Query: 1146 IIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGATI 967
            IIM+SG   EI +A EL+LSKLLSE+H ED +D + ++KVRL+VPN SC       GATI
Sbjct: 85   IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATI 144

Query: 966  KSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSG 787
            +SFIEDSQAGIKISPQD+NY G NDRLVTLTGS +EQMRAI LI+SKL ED HY+QSM+ 
Sbjct: 145  RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSMNS 204

Query: 786  PFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNG-SGGRFQNNKDDRSNSMIIGVA 610
            PFSY      G+ G PY Y++PSV   AYNA+NY PNG +GG+ QN+K++RSNS+ +GVA
Sbjct: 205  PFSY-----PGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVA 259

Query: 609  DEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMIL 430
            DEHI        R+IMEISQASGARIKISDRGD++SGT+DRKVTITGSQ AIR AESMIL
Sbjct: 260  DEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMIL 319

Query: 429  QKVASVRE 406
            QKVA   E
Sbjct: 320  QKVAYATE 327


>gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]
          Length = 349

 Score =  408 bits (1048), Expect = e-111
 Identities = 213/302 (70%), Positives = 248/302 (82%)
 Frame = -3

Query: 1311 DDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDRIIMIS 1132
            +  E+  YI+FLVSNAAAGSVIGKGG+TIT+FQS+SGARIQLSRN EFFPGT+DRIIMIS
Sbjct: 44   ESMERPAYIKFLVSNAAAGSVIGKGGATITDFQSKSGARIQLSRNHEFFPGTTDRIIMIS 103

Query: 1131 GEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXXXXGATIKSFIE 952
            G   EI+KA ELVL+KLLSE+  E+ +DVD R K+RL+VPN SC       G+TIKSFIE
Sbjct: 104  GAINEIIKAMELVLAKLLSELQTEEENDVDPRKKLRLVVPNGSCGGIIGKGGSTIKSFIE 163

Query: 951  DSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHYSQSMSGPFSYA 772
            +SQAGIKISPQD+NY+G+NDRLVTLTG+L+EQMRAI LILSKL ED HY+QSM+ PFSY 
Sbjct: 164  ESQAGIKISPQDNNYLGINDRLVTLTGTLDEQMRAIDLILSKLAEDPHYTQSMNAPFSYP 223

Query: 771  GVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSMIIGVADEHIXX 592
            GV  SG  G PY +++PSV   +YN   YGPNG+GG+FQNNK+DRSNS+ IGVAD HI  
Sbjct: 224  GV-FSGIHGTPYPHVLPSVATASYNQTGYGPNGAGGKFQNNKEDRSNSVTIGVADGHIGF 282

Query: 591  XXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAAESMILQKVASV 412
                  R+IMEISQASGARIKISDRGDF+SGT+DRKVTITGSQ AI AAESMI+QKVA  
Sbjct: 283  VVGRGGRNIMEISQASGARIKISDRGDFLSGTTDRKVTITGSQRAICAAESMIMQKVAYA 342

Query: 411  RE 406
             E
Sbjct: 343  SE 344



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = -3

Query: 1326 KSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFFPGTSDR 1147
            ++   +D +    +R +V N + G +IGKGGSTI  F  ES A I++S     + G +DR
Sbjct: 125  QTEEENDVDPRKKLRLVVPNGSCGGIIGKGGSTIKSFIEESQAGIKISPQDNNYLGINDR 184

Query: 1146 IIMISGEFTEIMKATELVLSKLLSEIH 1066
            ++ ++G   E M+A +L+LSKL  + H
Sbjct: 185  LVTLTGTLDEQMRAIDLILSKLAEDPH 211


>ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
            gi|557099992|gb|ESQ40355.1| hypothetical protein
            EUTSA_v10014068mg [Eutrema salsugineum]
          Length = 334

 Score =  397 bits (1021), Expect = e-108
 Identities = 202/313 (64%), Positives = 247/313 (78%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P  + S  +D  EK T+IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQEFF
Sbjct: 18   RSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 77

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGT+DRIIMISG   E++   EL+L KL SE+H EDG+DV+ R ++RL+VPNSSC     
Sbjct: 78   PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRRRIRLVVPNSSCGGIIG 137

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              GATIKSFIE+S+AGIKISP D+ Y GL+DRLVTL+G+ EEQMRAI LIL+KL  D HY
Sbjct: 138  KGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTSDDHY 197

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
            SQ++  P+SYAG+  SGF G PY Y++PSV    YN++NY PNGSGG++QN+K++ S + 
Sbjct: 198  SQNVHSPYSYAGLFYSGFHGHPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEASTTK 257

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGV+DEHI        R+IMEI+Q +GARIKISDRGDFMSGT+DRKV+ITGSQ AI+ A
Sbjct: 258  TIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQA 317

Query: 444  ESMILQKVASVRE 406
            E+MI QKV S  E
Sbjct: 318  ETMIKQKVDSASE 330


>ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Capsella rubella]
            gi|482556862|gb|EOA21054.1| hypothetical protein
            CARUB_v10001394mg [Capsella rubella]
          Length = 334

 Score =  397 bits (1021), Expect = e-108
 Identities = 202/313 (64%), Positives = 249/313 (79%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P  + S  +D  EK T+IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQEFF
Sbjct: 18   RSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 77

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGT+DRIIMISG   E++   EL+L KL SE+H EDG++V+ R ++RL+VPNSSC     
Sbjct: 78   PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 137

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              GATIKSFIE+S+AGIKISP D+ Y GL+DRLVTL+G+ EEQMRAI LIL+KL ED HY
Sbjct: 138  KGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 197

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
            SQ++  P+SYAG+  SGF G PY Y++PSV    YN++NY PNGSGG++QN+K++ SN++
Sbjct: 198  SQNVHSPYSYAGLFYSGFHGPPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEPSNTV 257

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGV+DEHI        R+IMEI+Q +GARIKISDRGDF+SGTSDRKV+ITG Q AI+ A
Sbjct: 258  TIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFISGTSDRKVSITGPQRAIQQA 317

Query: 444  ESMILQKVASVRE 406
            E+MI QKV S  E
Sbjct: 318  ETMIKQKVESATE 330


>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
            lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
            ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  397 bits (1021), Expect = e-108
 Identities = 203/316 (64%), Positives = 249/316 (78%)
 Frame = -3

Query: 1353 VAPKRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQ 1174
            +A + P  + S  +D  EK T+IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQ
Sbjct: 15   LAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQ 74

Query: 1173 EFFPGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXX 994
            EFFPGT+DRIIMISG   E++   EL+L KL SE+H EDG++V+ R ++RL+VPNSSC  
Sbjct: 75   EFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGG 134

Query: 993  XXXXXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMED 814
                 GATIKSFIE+S+AGIKISP D+ + GL+DRLVTL+G+ EEQMRAI LIL+KL ED
Sbjct: 135  IIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTED 194

Query: 813  SHYSQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRS 634
             HYSQ++  P+SYAG+  SGF G PY Y +PSV    YN++NY PNGSGG++QN+KD+ S
Sbjct: 195  DHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKDEAS 254

Query: 633  NSMIIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAI 454
             ++ IGVADEHI        R+IMEI+Q +GARIKISDRGDFMSGT+DRKV+ITG Q AI
Sbjct: 255  TTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGTTDRKVSITGPQRAI 314

Query: 453  RAAESMILQKVASVRE 406
            + AE+MI QKV S  E
Sbjct: 315  QQAETMIKQKVDSATE 330


>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
            gi|222865445|gb|EEF02576.1| hypothetical protein
            POPTR_0010s23710g [Populus trichocarpa]
          Length = 334

 Score =  397 bits (1021), Expect = e-108
 Identities = 205/313 (65%), Positives = 245/313 (78%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P    SP SD +EK TY RFLVSNAAAGSVIGKGG+TIT+FQS+SGARIQLSRN EFF
Sbjct: 18   RSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFF 77

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGTSDRIIM+SG   +++KA EL+++KLLSEI  EDGD+ + R +VRL+VPNS+C     
Sbjct: 78   PGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIG 137

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              G+ IKSFIE+S AGIKISP D  + GL DRLVT+TG+LEEQM AI LILSKL +D HY
Sbjct: 138  KGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHY 197

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
            SQ+M  PFSYAGV  SGF G  Y  ++P V   AYN++N+GPNG+  +FQ+NKDD +NS+
Sbjct: 198  SQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHNKDDITNSV 257

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGVADEHI        R+IMEISQ SGAR+KISDRGDFMSGT+DRK+TITGSQ AIRAA
Sbjct: 258  TIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAA 317

Query: 444  ESMILQKVASVRE 406
            E MI+QKV+   E
Sbjct: 318  EDMIMQKVSYASE 330


>ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
            gi|508726981|gb|EOY18878.1| Binding to TOMV RNA 1L (long
            form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  397 bits (1019), Expect = e-108
 Identities = 214/309 (69%), Positives = 244/309 (78%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P   KSP+S+  EK TYIRFLVSNAAAGSVIGKGGSTITEFQS+SGARIQLSRN EFF
Sbjct: 18   RSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFF 77

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGTSDRIIMISG   E++KA EL+L+KLL+E+++ED DDV+ R+KVRLIVPNSSC     
Sbjct: 78   PGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIG 137

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              GATIKSFIEDSQAGIKISPQD+N+ GLNDRLVTLTG+L+EQMRAI LILSKL ED HY
Sbjct: 138  KGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHY 197

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
             Q+M  PFSYA                    A  YN+++Y  NG+GG+FQN+K+DRSNS+
Sbjct: 198  LQAMHAPFSYA--------------------AATYNSMSYPSNGAGGKFQNHKEDRSNSV 237

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGVAD HI        R+IMEISQ SGARIKISDRGDFMSGT+DRKVTITGSQ AIR A
Sbjct: 238  TIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQA 297

Query: 444  ESMILQKVA 418
            ESMI+QKVA
Sbjct: 298  ESMIMQKVA 306


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  397 bits (1019), Expect = e-108
 Identities = 210/313 (67%), Positives = 243/313 (77%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P   KSP+SD  EK TY+RFLVSNAAAGSVIGKGG+TIT+FQS+SGARIQLSRN EFF
Sbjct: 19   RSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFF 78

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGTSDRII+ISG   +++K  ELVL+KLLSE+H EDGDDVD R+KVRL+VPNSSC     
Sbjct: 79   PGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIG 138

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              G+ IKSFIE+SQAGIKISPQD+N+ GLNDRLVT+TG+LEEQMRAI LILSKL +D HY
Sbjct: 139  KGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHY 198

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
             Q+M  PFSY                     AVAYN++NYG NG+GG+FQNNK+DR+NS+
Sbjct: 199  VQTMHAPFSY---------------------AVAYNSMNYGANGAGGKFQNNKEDRTNSV 237

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGVAD HI        R+IMEISQ SGARIKISDRGDFMSGT+DRK+ ITGSQ AIR A
Sbjct: 238  TIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTA 297

Query: 444  ESMILQKVASVRE 406
            E MI+QKVA   E
Sbjct: 298  EGMIMQKVAYASE 310


>ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]
            gi|332003360|gb|AED90743.1| TOMV RNA binding protein
            [Arabidopsis thaliana]
          Length = 334

 Score =  396 bits (1017), Expect = e-107
 Identities = 202/316 (63%), Positives = 249/316 (78%)
 Frame = -3

Query: 1353 VAPKRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQ 1174
            +A + P  + S  +D  EK T+IRFLVSNAAAGSVIGKGGSTITEFQ++SGARIQLSRNQ
Sbjct: 15   LAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQ 74

Query: 1173 EFFPGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXX 994
            EFFPGT+DRIIMISG   E++   EL+L KL SE+H EDG++V+ R ++RL+VPNSSC  
Sbjct: 75   EFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGG 134

Query: 993  XXXXXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMED 814
                 GATIKSFIE+S+AGIKISP D+ + GL+DRLVTL+G+ EEQMRAI LIL+KL ED
Sbjct: 135  IIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTED 194

Query: 813  SHYSQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRS 634
             HYSQ++  P+SYAG+  SGF G PY Y +PSV    YN++NY PNGSGG++QN+K++ S
Sbjct: 195  DHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKEEAS 254

Query: 633  NSMIIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAI 454
             ++ IGVADEHI        R+IMEI+Q +GARIKISDRGDFMSGT+DRKV+ITG Q AI
Sbjct: 255  TTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAI 314

Query: 453  RAAESMILQKVASVRE 406
            + AE+MI QKV S  E
Sbjct: 315  QQAETMIKQKVDSATE 330


>ref|XP_007218728.1| hypothetical protein PRUPE_ppa009068mg [Prunus persica]
            gi|462415190|gb|EMJ19927.1| hypothetical protein
            PRUPE_ppa009068mg [Prunus persica]
          Length = 307

 Score =  395 bits (1016), Expect = e-107
 Identities = 204/291 (70%), Positives = 242/291 (83%), Gaps = 3/291 (1%)
 Frame = -3

Query: 1350 APKRPGAN--KSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRN 1177
            AP+R  +   KSP+SD  EK TY+RFLVSNAAAGSVIGKGG+TIT+FQS+SGARIQLSRN
Sbjct: 14   APRRRSSPPPKSPASDTMEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRN 73

Query: 1176 QEFFPGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCX 997
             EFFPGT+DRIIM+SG   EI+KA +LVL+KLLSE++ E+ DDV+ R+K+RL+VPNSSC 
Sbjct: 74   HEFFPGTTDRIIMVSGSINEILKAVDLVLAKLLSELYSEETDDVEPRTKLRLVVPNSSCG 133

Query: 996  XXXXXXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLME 817
                  G+TIKSFIE SQAGIKISPQD+NY GLNDRLVT+TG+L+EQMRA+ LI+SKL E
Sbjct: 134  GIIGKGGSTIKSFIEGSQAGIKISPQDNNYFGLNDRLVTVTGNLDEQMRAVDLIVSKLSE 193

Query: 816  DSHYSQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYG-PNGSGGRFQNNKDD 640
            D HY+QSM+ PFSY GV  SGF G PY Y++PSV   AYNA++YG PNG+GG+FQNNK+D
Sbjct: 194  DPHYTQSMNAPFSYPGVFFSGFHGIPYTYVLPSVATAAYNAMSYGPPNGTGGKFQNNKED 253

Query: 639  RSNSMIIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDR 487
            RSNS+ IGVAD HI        R+IMEISQASGARIKISDRGDFMSGT+DR
Sbjct: 254  RSNSVTIGVADSHIGLVVGRGGRTIMEISQASGARIKISDRGDFMSGTTDR 304


>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
            gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
            (long form) isoform 1 [Theobroma cacao]
            gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
            (long form) isoform 1 [Theobroma cacao]
            gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  395 bits (1014), Expect = e-107
 Identities = 213/309 (68%), Positives = 243/309 (78%)
 Frame = -3

Query: 1344 KRPGANKSPSSDDKEKATYIRFLVSNAAAGSVIGKGGSTITEFQSESGARIQLSRNQEFF 1165
            + P   KSP+S+  EK TYIRFLVSNAAAGSVIGKGGSTITEFQS+SGARIQLSRN EFF
Sbjct: 18   RSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFF 77

Query: 1164 PGTSDRIIMISGEFTEIMKATELVLSKLLSEIHVEDGDDVDLRSKVRLIVPNSSCXXXXX 985
            PGTSDRIIMISG   E++KA EL+L+KLL+E+++ED DDV+ R+KVRLIVPNSSC     
Sbjct: 78   PGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIG 137

Query: 984  XXGATIKSFIEDSQAGIKISPQDHNYIGLNDRLVTLTGSLEEQMRAIFLILSKLMEDSHY 805
              GATIKSFIEDSQAGIKISPQD+N+ GLNDRLVTLTG+L+EQMRAI LILSKL ED HY
Sbjct: 138  KGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHY 197

Query: 804  SQSMSGPFSYAGVNVSGFPGFPYGYLVPSVGAVAYNAINYGPNGSGGRFQNNKDDRSNSM 625
             Q+M  PFSY                     A  YN+++Y  NG+GG+FQN+K+DRSNS+
Sbjct: 198  LQAMHAPFSY---------------------AATYNSMSYPSNGAGGKFQNHKEDRSNSV 236

Query: 624  IIGVADEHIXXXXXXXXRSIMEISQASGARIKISDRGDFMSGTSDRKVTITGSQAAIRAA 445
             IGVAD HI        R+IMEISQ SGARIKISDRGDFMSGT+DRKVTITGSQ AIR A
Sbjct: 237  TIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQA 296

Query: 444  ESMILQKVA 418
            ESMI+QKVA
Sbjct: 297  ESMIMQKVA 305