BLASTX nr result
ID: Cocculus22_contig00007291
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00007291
(623 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABB54381.2| FVE [Ipomoea nil] 74 4e-11
gb|EXC09145.1| hypothetical protein L484_005097 [Morus notabilis] 74 5e-11
gb|AFD61545.1| WD-40 repeat protein MSI4 [Dendrobium nobile] 74 5e-11
gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar] 74 5e-11
gb|AFW83723.1| WD repeat-containing protein RBAP1 [Zea mays] 72 1e-10
gb|AFW83722.1| WD repeat-containing protein RBAP1 [Zea mays] 72 1e-10
tpg|DAA57903.1| TPA: hypothetical protein ZEAMMB73_650751 [Zea m... 71 2e-10
ref|XP_003569664.1| PREDICTED: WD-40 repeat-containing protein M... 71 2e-10
gb|ACG35072.1| WD-40 repeat protein MSI4 [Zea mays] 71 2e-10
ref|NP_001105191.1| nucleosome/chromatin assembly factor group C... 71 2e-10
gb|AAF97517.1|AF250047_1 WD-repeat protein RBAP1 [Zea mays] 71 2e-10
emb|CAB52218.1| Y1 protein [Silene latifolia] 71 3e-10
emb|CAB52219.1| X1 protein [Silene latifolia] 71 3e-10
emb|CAC81927.1| putative WD-repeat protein [Silene latifolia] 71 3e-10
ref|XP_006409039.1| hypothetical protein EUTSA_v10022653mg [Eutr... 70 4e-10
ref|XP_006644601.1| PREDICTED: WD-40 repeat-containing protein M... 70 5e-10
ref|XP_006826731.1| hypothetical protein AMTR_s00136p00031470 [A... 70 5e-10
ref|XP_004969719.1| PREDICTED: WD-40 repeat-containing protein M... 69 9e-10
ref|XP_002456237.1| hypothetical protein SORBIDRAFT_03g032630 [S... 69 9e-10
ref|NP_001105067.1| nucleosome/chromatin assembly factor C [Zea ... 69 9e-10
>gb|ABB54381.2| FVE [Ipomoea nil]
Length = 454
Score = 73.9 bits (180), Expect = 4e-11
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ER GG+ SV+EKY QWKSL+PVLYDW ++HNLVW SLSCR
Sbjct: 1 MKERTGKGGQPSVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCR 44
>gb|EXC09145.1| hypothetical protein L484_005097 [Morus notabilis]
Length = 466
Score = 73.6 bits (179), Expect = 5e-11
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERGK G E SVEE+Y QWKSL+PVLYDW ++HNLVW SLSCR
Sbjct: 1 MKERGK-GTEPSVEERYTQWKSLVPVLYDWLANHNLVWPSLSCR 43
>gb|AFD61545.1| WD-40 repeat protein MSI4 [Dendrobium nobile]
Length = 468
Score = 73.6 bits (179), Expect = 5e-11
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERGKAG + SV+E+Y QWKSL+PVLYDW ++HNLVW SLSCR
Sbjct: 1 MKERGKAG-QRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCR 43
>gb|AEF01212.1| FVE [x Doritaenopsis hybrid cultivar]
Length = 468
Score = 73.6 bits (179), Expect = 5e-11
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERGKAG + SV+E+Y QWKSL+PVLYDW ++HNLVW SLSCR
Sbjct: 1 MKERGKAG-QRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCR 43
>gb|AFW83723.1| WD repeat-containing protein RBAP1 [Zea mays]
Length = 1369
Score = 72.0 bits (175), Expect = 1e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -2
Query: 538 RREALVRMEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
RR + M+ER +G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 932 RRPPVSEMKER--SGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 980
>gb|AFW83722.1| WD repeat-containing protein RBAP1 [Zea mays]
Length = 1391
Score = 72.0 bits (175), Expect = 1e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = -2
Query: 538 RREALVRMEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
RR + M+ER +G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 932 RRPPVSEMKER--SGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 980
>tpg|DAA57903.1| TPA: hypothetical protein ZEAMMB73_650751 [Zea mays]
Length = 394
Score = 71.2 bits (173), Expect = 2e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERG G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKERG--GSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>ref|XP_003569664.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Brachypodium
distachyon]
Length = 456
Score = 71.2 bits (173), Expect = 2e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERG G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKERG--GSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>gb|ACG35072.1| WD-40 repeat protein MSI4 [Zea mays]
Length = 517
Score = 71.2 bits (173), Expect = 2e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERG G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 65 MKERG--GSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 106
>ref|NP_001105191.1| nucleosome/chromatin assembly factor group C [Zea mays]
gi|21898564|gb|AAM77039.1| nucleosome/chromatin assembly
factor group C [Zea mays] gi|194689652|gb|ACF78910.1|
unknown [Zea mays] gi|224030189|gb|ACN34170.1| unknown
[Zea mays] gi|414880773|tpg|DAA57904.1| TPA:
nucleosome/chromatin assembly factor group C [Zea mays]
Length = 453
Score = 71.2 bits (173), Expect = 2e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERG G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKERG--GSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>gb|AAF97517.1|AF250047_1 WD-repeat protein RBAP1 [Zea mays]
Length = 453
Score = 71.2 bits (173), Expect = 2e-10
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ERG G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKERG--GSSAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>emb|CAB52218.1| Y1 protein [Silene latifolia]
Length = 472
Score = 70.9 bits (172), Expect = 3e-10
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -2
Query: 517 MEERGKAGGEG-SVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M E+GK G + SV+EKY QWKSL+P+LYDW ++HNLVW SLSCR
Sbjct: 1 MTEKGKGGKKALSVDEKYSQWKSLVPILYDWLANHNLVWPSLSCR 45
>emb|CAB52219.1| X1 protein [Silene latifolia]
Length = 472
Score = 70.9 bits (172), Expect = 3e-10
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -2
Query: 517 MEERGKAGGEG-SVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M E+GK G + SV+EKY QWKSL+P+LYDW ++HNLVW SLSCR
Sbjct: 1 MTEKGKGGKKALSVDEKYSQWKSLVPILYDWLANHNLVWPSLSCR 45
>emb|CAC81927.1| putative WD-repeat protein [Silene latifolia]
Length = 473
Score = 70.9 bits (172), Expect = 3e-10
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -2
Query: 517 MEERGKAGGEG-SVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M E+GK G + SV+EKY QWKSL+P+LYDW ++HNLVW SLSCR
Sbjct: 2 MTEKGKGGKKALSVDEKYSQWKSLVPILYDWLANHNLVWPSLSCR 46
>ref|XP_006409039.1| hypothetical protein EUTSA_v10022653mg [Eutrema salsugineum]
gi|557110201|gb|ESQ50492.1| hypothetical protein
EUTSA_v10022653mg [Eutrema salsugineum]
Length = 510
Score = 70.5 bits (171), Expect = 4e-10
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = -2
Query: 520 RMEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
+M+E GK + SV+EKY QWK L+P+LYDW ++HNLVW SLSCR
Sbjct: 54 KMKESGKKTQQPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCR 98
>ref|XP_006644601.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Oryza
brachyantha]
Length = 454
Score = 70.1 bits (170), Expect = 5e-10
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+E+G G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKEKG--GSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>ref|XP_006826731.1| hypothetical protein AMTR_s00136p00031470 [Amborella trichopoda]
gi|548831151|gb|ERM93968.1| hypothetical protein
AMTR_s00136p00031470 [Amborella trichopoda]
Length = 470
Score = 70.1 bits (170), Expect = 5e-10
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ER KAG + SV+E+Y QWKSL+PVLYDW ++HNLVW SLSCR
Sbjct: 1 MKERVKAG-QPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCR 43
>ref|XP_004969719.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Setaria
italica]
Length = 453
Score = 69.3 bits (168), Expect = 9e-10
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ER +G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKER--SGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>ref|XP_002456237.1| hypothetical protein SORBIDRAFT_03g032630 [Sorghum bicolor]
gi|241928212|gb|EES01357.1| hypothetical protein
SORBIDRAFT_03g032630 [Sorghum bicolor]
Length = 453
Score = 69.3 bits (168), Expect = 9e-10
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ER +G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKER--SGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42
>ref|NP_001105067.1| nucleosome/chromatin assembly factor C [Zea mays]
gi|14550114|gb|AAK67147.1|AF384037_1
nucleosome/chromatin assembly factor C [Zea mays]
gi|195619846|gb|ACG31753.1| WD-40 repeat protein MSI4
[Zea mays] gi|223975043|gb|ACN31709.1| unknown [Zea
mays] gi|413951076|gb|AFW83725.1| WD repeat-containing
protein RBAP1 [Zea mays]
Length = 453
Score = 69.3 bits (168), Expect = 9e-10
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -2
Query: 517 MEERGKAGGEGSVEEKYEQWKSLIPVLYDWFSSHNLVWSSLSCR 386
M+ER +G +V+E+Y QWKSLIPVLYDWF++HNLVW SLSCR
Sbjct: 1 MKER--SGSRAAVDERYAQWKSLIPVLYDWFANHNLVWPSLSCR 42