BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00007266
         (646 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, part...   122   7e-26
ref|XP_007204808.1| hypothetical protein PRUPE_ppa025649mg [Prun...   122   1e-25
ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Popu...   120   5e-25
gb|AFK41314.1| unknown [Lotus japonicus]                              119   6e-25
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   119   6e-25
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   119   6e-25
ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citr...   119   6e-25
ref|XP_004287160.1| PREDICTED: U6 snRNA-associated Sm-like prote...   119   8e-25
ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like prote...   119   1e-24
ref|XP_007033677.1| Small nuclear ribonucleoprotein family prote...   119   1e-24
ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   119   1e-24
ref|XP_006402651.1| hypothetical protein EUTSA_v10006338mg [Eutr...   118   2e-24
ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like prote...   118   2e-24
ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycin...   118   2e-24
ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785 [Arab...   117   4e-24
ref|XP_002876525.1| hypothetical protein ARALYDRAFT_486445 [Arab...   117   4e-24
ref|NP_181909.1| U6 snRNA-associated Sm-like protein LSm6 [Arabi...   117   4e-24
ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Me...   116   7e-24
ref|XP_007139904.1| hypothetical protein PHAVU_008G068400g [Phas...   115   9e-24
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...   115   9e-24

>ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, partial [Populus
           trichocarpa] gi|550332631|gb|EEE88636.2| hypothetical
           protein POPTR_0008s07780g, partial [Populus trichocarpa]
          Length = 134

 Score =  122 bits (307), Expect = 7e-26
 Identities = 69/112 (61%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
 Frame = -3

Query: 329 YFVVLCML*FYPILHC---ITKLLFPGSSF*LYWCKQAIEIEVEMSSGVGTIYGEKGSGT 159
           YF ++C+  F   +     + K L P       W  +    + +MS+G     GEKGS T
Sbjct: 4   YFSIICIYSFKAQVQVPPPLPKTLIPKQKIVFVWQLR----KKKMSTG-----GEKGSAT 54

Query: 158 TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 55  TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 106


>ref|XP_007204808.1| hypothetical protein PRUPE_ppa025649mg [Prunus persica]
           gi|462400339|gb|EMJ06007.1| hypothetical protein
           PRUPE_ppa025649mg [Prunus persica]
          Length = 135

 Score =  122 bits (305), Expect = 1e-25
 Identities = 63/78 (80%), Positives = 67/78 (85%)
 Frame = -3

Query: 236 CKQAIEIEVEMSSGVGTIYGEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLD 57
           CK+ +   +E  SG G    EKG+GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLD
Sbjct: 35  CKK-LRFRIEKMSGGG----EKGTGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLD 89

Query: 56  GYMNIAMEQTEEYVNGQL 3
           GYMNIAMEQTEEYVNGQL
Sbjct: 90  GYMNIAMEQTEEYVNGQL 107


>ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Populus trichocarpa]
           gi|118482915|gb|ABK93371.1| unknown [Populus
           trichocarpa] gi|222865208|gb|EEF02339.1| hypothetical
           protein POPTR_0010s18590g [Populus trichocarpa]
          Length = 91

 Score =  120 bits (300), Expect = 5e-25
 Identities = 62/68 (91%), Positives = 62/68 (91%)
 Frame = -3

Query: 206 MSSGVGTIYGEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT 27
           MSSG     GEKGS TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT
Sbjct: 1   MSSG-----GEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT 55

Query: 26  EEYVNGQL 3
           EEYVNGQL
Sbjct: 56  EEYVNGQL 63


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  119 bits (299), Expect = 6e-25
 Identities = 58/58 (100%), Positives = 58/58 (100%)
 Frame = -3

Query: 176 EKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           EKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   EKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 62


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  119 bits (299), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEKGS TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  119 bits (299), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEKGS TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citrus clementina]
           gi|568879626|ref|XP_006492754.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Citrus
           sinensis] gi|118483023|gb|ABK93423.1| unknown [Populus
           trichocarpa] gi|557544402|gb|ESR55380.1| hypothetical
           protein CICLE_v10023071mg [Citrus clementina]
          Length = 91

 Score =  119 bits (299), Expect = 6e-25
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEKGS TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_004287160.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Fragaria
           vesca subsp. vesca]
          Length = 92

 Score =  119 bits (298), Expect = 8e-25
 Identities = 60/66 (90%), Positives = 61/66 (92%)
 Frame = -3

Query: 200 SGVGTIYGEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEE 21
           SG G    E+GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEE
Sbjct: 2   SGAGA---ERGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEE 58

Query: 20  YVNGQL 3
           YVNGQL
Sbjct: 59  YVNGQL 64


>ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Solanum
           tuberosum]
          Length = 91

 Score =  119 bits (297), Expect = 1e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEKGS TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_007033677.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|590654371|ref|XP_007033678.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|590654375|ref|XP_007033679.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712706|gb|EOY04603.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712707|gb|EOY04604.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712708|gb|EOY04605.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 91

 Score =  119 bits (297), Expect = 1e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEKGS TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  119 bits (297), Expect = 1e-24
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = -3

Query: 188 TIYGEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 9
           +I GEKGS +TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 2   SIGGEKGSASTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 61

Query: 8   QL 3
           QL
Sbjct: 62  QL 63


>ref|XP_006402651.1| hypothetical protein EUTSA_v10006338mg [Eutrema salsugineum]
           gi|567183323|ref|XP_006402652.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
           gi|567183326|ref|XP_006402653.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
           gi|567183329|ref|XP_006402654.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
           gi|557103750|gb|ESQ44104.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
           gi|557103751|gb|ESQ44105.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
           gi|557103752|gb|ESQ44106.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
           gi|557103753|gb|ESQ44107.1| hypothetical protein
           EUTSA_v10006338mg [Eutrema salsugineum]
          Length = 91

 Score =  118 bits (295), Expect = 2e-24
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEK SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKISGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform X1
           [Cicer arietinum] gi|502143790|ref|XP_004505466.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform X2 [Cicer arietinum]
          Length = 90

 Score =  118 bits (295), Expect = 2e-24
 Identities = 57/58 (98%), Positives = 58/58 (100%)
 Frame = -3

Query: 176 EKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           EKGSG+TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   EKGSGSTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 62


>ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycine max]
           gi|255627589|gb|ACU14139.1| unknown [Glycine max]
          Length = 91

 Score =  118 bits (295), Expect = 2e-24
 Identities = 57/59 (96%), Positives = 58/59 (98%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           G+ GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GKAGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785 [Arabidopsis lyrata subsp.
           lyrata] gi|297325908|gb|EFH56328.1| hypothetical protein
           ARALYDRAFT_903785 [Arabidopsis lyrata subsp. lyrata]
          Length = 91

 Score =  117 bits (292), Expect = 4e-24
 Identities = 56/59 (94%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEK SGTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_002876525.1| hypothetical protein ARALYDRAFT_486445 [Arabidopsis lyrata subsp.
           lyrata] gi|297322363|gb|EFH52784.1| hypothetical protein
           ARALYDRAFT_486445 [Arabidopsis lyrata subsp. lyrata]
          Length = 91

 Score =  117 bits (292), Expect = 4e-24
 Identities = 57/59 (96%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEK SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQL 63


>ref|NP_181909.1| U6 snRNA-associated Sm-like protein LSm6 [Arabidopsis thaliana]
           gi|145331121|ref|NP_001078052.1| U6 snRNA-associated
           Sm-like protein LSm6 [Arabidopsis thaliana]
           gi|2281089|gb|AAB64025.1| putative small nuclear
           ribonucleoprotein polypeptide F [Arabidopsis thaliana]
           gi|30725284|gb|AAP37664.1| At2g43810 [Arabidopsis
           thaliana] gi|110735708|dbj|BAE99834.1| putative small
           nuclear ribonucleoprotein polypeptide F [Arabidopsis
           thaliana] gi|222423635|dbj|BAH19786.1| AT2G43810
           [Arabidopsis thaliana] gi|330255235|gb|AEC10329.1| U6
           snRNA-associated Sm-like protein LSm6 [Arabidopsis
           thaliana] gi|330255236|gb|AEC10330.1| U6
           snRNA-associated Sm-like protein LSm6 [Arabidopsis
           thaliana]
          Length = 91

 Score =  117 bits (292), Expect = 4e-24
 Identities = 56/59 (94%), Positives = 57/59 (96%)
 Frame = -3

Query: 179 GEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GEK SGTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNGQL
Sbjct: 5   GEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Medicago truncatula]
           gi|355508672|gb|AES89814.1| U6 snRNA-associated Sm-like
           protein LSm6 [Medicago truncatula]
           gi|388502230|gb|AFK39181.1| unknown [Medicago
           truncatula]
          Length = 91

 Score =  116 bits (290), Expect = 7e-24
 Identities = 56/58 (96%), Positives = 57/58 (98%)
 Frame = -3

Query: 176 EKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           + GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 6   KSGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_007139904.1| hypothetical protein PHAVU_008G068400g [Phaseolus vulgaris]
           gi|561013037|gb|ESW11898.1| hypothetical protein
           PHAVU_008G068400g [Phaseolus vulgaris]
          Length = 91

 Score =  115 bits (289), Expect = 9e-24
 Identities = 56/56 (100%), Positives = 56/56 (100%)
 Frame = -3

Query: 170 GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 8   GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score =  115 bits (289), Expect = 9e-24
 Identities = 56/56 (100%), Positives = 56/56 (100%)
 Frame = -3

Query: 170 GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 3
           GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL
Sbjct: 8   GSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQL 63