BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00007236
         (708 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007013880.1| Tetratricopeptide repeat (TPR)-like superfam...   286   5e-75
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   282   7e-74
ref|XP_007152620.1| hypothetical protein PHAVU_004G145400g [Phas...   281   1e-73
ref|XP_007203708.1| hypothetical protein PRUPE_ppa019391mg, part...   281   2e-73
ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containi...   281   2e-73
gb|EYU37145.1| hypothetical protein MIMGU_mgv1a000931mg [Mimulus...   278   1e-72
ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi...   277   2e-72
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   277   3e-72
ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containi...   276   5e-72
gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Moru...   274   2e-71
ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containi...   274   2e-71
ref|XP_002307852.2| hypothetical protein POPTR_0006s007001g, par...   273   3e-71
ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citr...   272   7e-71
ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutr...   271   1e-70
ref|XP_003595651.1| Pentatricopeptide repeat-containing protein ...   270   3e-70
ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Caps...   269   6e-70
ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containi...   268   1e-69
ref|XP_004488390.1| PREDICTED: pentatricopeptide repeat-containi...   266   4e-69
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   266   7e-69
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar...   263   3e-68

>ref|XP_007013880.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao] gi|508784243|gb|EOY31499.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 916

 Score =  286 bits (732), Expect = 5e-75
 Identities = 132/176 (75%), Positives = 156/176 (88%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNT+IAAYGQ KD +NM + V++MQFNGFSVSLEAYNCMLDTYGK  QMEKF+
Sbjct: 741  GLVDVISYNTVIAAYGQNKDLKNMSSTVREMQFNGFSVSLEAYNCMLDTYGKDGQMEKFR 800

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++QRMK+SNC+ D YTY I+INIYGEQ WI+EVA VL+ELKECG+G +LCSYNTLIKAY
Sbjct: 801  SVLQRMKESNCALDRYTYNIMINIYGEQRWIDEVAAVLTELKECGLGPDLCSYNTLIKAY 860

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV ++KEMRENG+EPD +TY NLI AL++ND FLEAVKWSLWMKQ+GM
Sbjct: 861  GIAGMVEDAVGLIKEMRENGVEPDNITYNNLITALRKNDKFLEAVKWSLWMKQMGM 916



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 48/172 (27%), Positives = 90/172 (52%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++  Y +G +         +M+ +G  V   AY+ M+  Y +    +K +DI+
Sbjct: 256 NVATFGMLMGLYQKGWNASEAEFTFSQMRNSGI-VCQSAYSAMITIYTRLSLYDKAEDII 314

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             M+      +   + +++N Y ++G +EE  +VL  ++E G   N+ +YNTLI  YG +
Sbjct: 315 GFMRKDKVILNLENWLVMLNAYSQRGKLEEAEQVLVSMQEAGFSPNIVAYNTLITGYGKS 374

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + A  V   +++ G+EPD+ TY ++I    R DN+ E   +   +KQ+G
Sbjct: 375 SNMDAAQLVFLSIQQVGLEPDETTYRSMIEGWGRADNYKEVKWYYKELKQLG 426


>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Vitis vinifera]
            gi|297745081|emb|CBI38673.3| unnamed protein product
            [Vitis vinifera]
          Length = 900

 Score =  282 bits (722), Expect = 7e-74
 Identities = 130/176 (73%), Positives = 157/176 (89%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNTIIAAYGQ KD + M + V++MQFNGFSVSLE YNCMLD+YGK  Q+E F+
Sbjct: 725  GLVDVISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFR 784

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             +++RMK+S+C+SDHYTY I+INIYGEQGWIEEVA VL+ELKE G+G +LCSYNTLIKAY
Sbjct: 785  SVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTLIKAY 844

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV +VKEMRENGI+PD++TYINLI AL++ND FLEAVKWSLWMKQ+G+
Sbjct: 845  GIAGMVEDAVVLVKEMRENGIQPDRITYINLINALRKNDEFLEAVKWSLWMKQMGL 900



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 42/172 (24%), Positives = 90/172 (52%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  +++ Y +G +  +      +M+  G +    AY+ M+  Y +    +K ++++
Sbjct: 242 NVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITCQ-SAYSAMITIYTRMSLYDKAEEVI 300

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             +++     +   + +L+N Y +QG ++E   VL  ++  G   N+ +YN LI  YG A
Sbjct: 301 DFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKA 360

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + A  + + ++  G+EPD+ TY ++I    R +N+ EA  +   +K++G
Sbjct: 361 SNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLG 412



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 38/147 (25%), Positives = 67/147 (45%)
 Frame = +1

Query: 31  IIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIMQRMKDSN 210
           ++ AY Q    +    ++  MQ  GFS ++ AYN ++  YGK+  M+  + I + +K+  
Sbjct: 318 LLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVG 377

Query: 211 CSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIAGMAEEAV 390
              D  TY  +I  +G     +E     +ELK  G   N  +  T+I         E+A 
Sbjct: 378 LEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPNSSNLYTMINLQAKYADGEDAA 437

Query: 391 AVVKEMRENGIEPDKVTYINLIRALQR 471
             + +M+  G +   V    L++A +R
Sbjct: 438 RTLDDMKRIGCQYSSVLG-TLLQAYER 463


>ref|XP_007152620.1| hypothetical protein PHAVU_004G145400g [Phaseolus vulgaris]
            gi|561025929|gb|ESW24614.1| hypothetical protein
            PHAVU_004G145400g [Phaseolus vulgaris]
          Length = 852

 Score =  281 bits (720), Expect = 1e-73
 Identities = 133/174 (76%), Positives = 152/174 (87%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVITYNTI+AAYG+ KDF NM   V+KM+F+GFSVSLEAYN MLD YGK+ QME F+
Sbjct: 677  GLVDVITYNTIVAAYGKNKDFDNMSLTVQKMEFDGFSVSLEAYNSMLDAYGKNGQMETFR 736

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++QRMKDSNC+SDHYTY  +INIYGEQGWI EVA VL+ELKECG+  +LCSYNTLIKAY
Sbjct: 737  SVLQRMKDSNCASDHYTYNTMINIYGEQGWINEVATVLTELKECGLRPDLCSYNTLIKAY 796

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQI 522
            GIAGM EEAV ++KEMR+NGIEPDK TY NLI AL+RNDNFLEAVKWSLWMKQ+
Sbjct: 797  GIAGMVEEAVGLIKEMRKNGIEPDKTTYTNLITALRRNDNFLEAVKWSLWMKQM 850



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLE-AYNCMLDTYGKSRQMEKFKDI 186
           +V T   ++  Y +G +         +M+  GF +  E AY+ M+  Y + R  EK   +
Sbjct: 191 NVATVGMLMGLYRKGWNLEEAEFAFSQMR--GFGIVCESAYSSMITIYTRLRLYEKALCV 248

Query: 187 MQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGI 366
           ++ M+      +   + +++N Y +QG +E+   VL  ++E G  AN+ +YNT+I  YG 
Sbjct: 249 IEFMRRDEVVPNLENWLVMLNAYSQQGKLEDAERVLEAMQEAGFCANIIAYNTMITGYGK 308

Query: 367 AGMAEEAVAVVKEMRENG-IEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQI 522
           AG  + A  +   +R++  ++PD+ TY ++I    R DN++ A ++   +KQ+
Sbjct: 309 AGKMDSAQRLFMRIRQSSQLDPDETTYRSMIEGWGRADNYVYATRYYKELKQL 361


>ref|XP_007203708.1| hypothetical protein PRUPE_ppa019391mg, partial [Prunus persica]
            gi|462399239|gb|EMJ04907.1| hypothetical protein
            PRUPE_ppa019391mg, partial [Prunus persica]
          Length = 766

 Score =  281 bits (718), Expect = 2e-73
 Identities = 129/176 (73%), Positives = 157/176 (89%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL D+I+YNTIIAAYG+ KD RNM +   +MQF GFSVSLEAYN MLD YGK  QME+F+
Sbjct: 591  GLVDMISYNTIIAAYGRNKDLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFR 650

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++QRMK+++C+SDHYTY I+INIYGEQGWI+EVA+VL+ELKECG+G +LCSYNTLIKAY
Sbjct: 651  SVLQRMKETSCASDHYTYNIMINIYGEQGWIDEVADVLTELKECGLGPDLCSYNTLIKAY 710

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV +VKEMRENGI+PDK+TYINLI AL++ND +LEAVKWSLWMKQ+G+
Sbjct: 711  GIAGMVEDAVHLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKWSLWMKQMGL 766



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 46/172 (26%), Positives = 91/172 (52%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           ++ T+  ++  Y +G +         +M+  G  +   AY+ M+  Y +    EK ++I+
Sbjct: 106 NIATFGMLMVLYQKGWNVEEAEFTFFQMRNFGI-LCQSAYSSMITIYTRLNLFEKAEEII 164

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             +K+     +   + ++IN Y +QG +++   VL  ++E G   N+ +YNTLI  YG A
Sbjct: 165 GLLKEDRVRLNLDNWLVMINAYCQQGKVDDAELVLVSMQEAGFSPNIIAYNTLITGYGKA 224

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + A  + + ++  G+EPD+ TY ++I    R DN++EA  +   +K++G
Sbjct: 225 SKMDAADHLFQGIKNAGLEPDETTYRSMIEGWGRADNYMEAEWYYKELKRLG 276



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKM-QFNGFSVSLEAYNCMLDTYGKSRQMEKFKDI 186
           D+I Y+  +  Y +     +  +++  M +  G    +  +  ML  Y +  +++K KD+
Sbjct: 454 DMIAYSIAVRMYVKAGALEDACSVLDTMDKQEGIVPDIYMFRDMLRIYQRCGRLDKLKDL 513

Query: 187 MQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGI 366
             ++  S  + D   Y  +IN       ++E++E+  E+ +CG   N  ++N ++  YG 
Sbjct: 514 YYKLLKSGVTWDQEMYNCVINCCSRALPVDEISEIFDEMLQCGFVPNTITFNVMLDVYGK 573

Query: 367 AGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRN 474
           A + ++A  +    ++ G+  D ++Y  +I A  RN
Sbjct: 574 AKLLKKARKLFWMAQKWGL-VDMISYNTIIAAYGRN 608


>ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1201

 Score =  281 bits (718), Expect = 2e-73
 Identities = 134/177 (75%), Positives = 157/177 (88%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GLADVI+YNT+IAAYG+ KDF+NM + VKKM FNGFSVSLEAYNCMLD YGK  QMEKF+
Sbjct: 1025 GLADVISYNTLIAAYGRSKDFKNMSSTVKKMHFNGFSVSLEAYNCMLDAYGKEGQMEKFR 1084

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECG-VGANLCSYNTLIKA 357
            ++++R+K+S  SSDHYTY I+INIYGE GWIEEV+EVL+ELKE G +G +LCSYNTLIKA
Sbjct: 1085 NVLERLKESGHSSDHYTYNIMINIYGELGWIEEVSEVLAELKESGSIGPDLCSYNTLIKA 1144

Query: 358  YGIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            YGIAGM E AV +VKEMRENGIEPD++TY NLI AL++ND FLEAVKWSLWMKQIG+
Sbjct: 1145 YGIAGMVERAVDLVKEMRENGIEPDRITYTNLINALRKNDKFLEAVKWSLWMKQIGL 1201



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 46/172 (26%), Positives = 89/172 (51%)
 Frame = +1

Query: 10   DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
            ++ T+  ++A Y +G            M+ N   +   AY+ ML  Y + R  +K ++I+
Sbjct: 541  NIATFGLLMALYQKGWHVEEAEFAFSMMR-NLKIMCQSAYSSMLTIYTRMRLYDKAEEII 599

Query: 190  QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
              ++      +   + +L+N Y +QG + E  +VL+ + + G   N+ +YNTLI  YG  
Sbjct: 600  GFLRKDEVILNLENWLVLLNAYCQQGKLLEAEQVLASMNQAGFSPNIVAYNTLITGYGKI 659

Query: 370  GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
                +A  +  +++  G+EPD+ TY ++I    R DN+ EA ++   +K++G
Sbjct: 660  SNMRDAQRLFGDIKRVGMEPDETTYRSMIEGWGRADNYEEANRYYAELKRLG 711



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
 Frame = +1

Query: 121  EAYNCMLDTYGKSRQMEKFKDIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSE 300
            E Y+C+++   ++  +++   +   M       +  T+ +++++YG+    +   EV S 
Sbjct: 961  EMYSCVINCCARALPVDELSRLFDEMLKRGFLPNTVTFNVMLDVYGKSRLFKRAREVFSM 1020

Query: 301  LKECGVGANLCSYNTLIKAYGIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRA------ 462
             K+CG+ A++ SYNTLI AYG +   +   + VK+M  NG       Y  ++ A      
Sbjct: 1021 AKKCGL-ADVISYNTLIAAYGRSKDFKNMSSTVKKMHFNGFSVSLEAYNCMLDAYGKEGQ 1079

Query: 463  LQRNDNFLEAVKWS 504
            +++  N LE +K S
Sbjct: 1080 MEKFRNVLERLKES 1093


>gb|EYU37145.1| hypothetical protein MIMGU_mgv1a000931mg [Mimulus guttatus]
          Length = 939

 Score =  278 bits (711), Expect = 1e-72
 Identities = 133/176 (75%), Positives = 154/176 (87%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNT+IA YG+ K  +NM A V KMQF+GFSVSLEAYNCMLD YGK  +M+KFK
Sbjct: 764  GLIDVISYNTLIAVYGKNKYLKNMSAAVTKMQFDGFSVSLEAYNCMLDAYGKQGEMDKFK 823

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++QRMK SNCSSD YTY ILINIYGE+GWIEEVA VL+ELKE G+G +LCSYNTLIKAY
Sbjct: 824  SVLQRMKLSNCSSDRYTYNILINIYGEKGWIEEVANVLAELKEYGIGPDLCSYNTLIKAY 883

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AVA+VKEMRENGIEPD++TY NLI AL++ND FLEAVKWSLWMKQ+G+
Sbjct: 884  GIAGMVEDAVALVKEMRENGIEPDRLTYTNLITALRKNDMFLEAVKWSLWMKQMGL 939



 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 40/172 (23%), Positives = 89/172 (51%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  +++ Y +G           +M+ N   +   AY+ M+  Y ++R  +K +D++
Sbjct: 280 NVATFGMLMSLYQKGCHVEEAEYTFSRMR-NLKIICQSAYSSMITIYTRTRLYDKAEDVI 338

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
           + +K+     +   + +++N Y +QG +++    L  +KE G    + +YNT+I  YG  
Sbjct: 339 RFLKEDEVVLNKENWLVVLNCYCQQGKLDDTELALRAMKEAGFSPCIVAYNTMITGYGRV 398

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              +++  ++  ++E G+ PD+ TY +LI    R  N+ +A  + + + + G
Sbjct: 399 SSMDQSERLLDNLKETGLVPDETTYRSLIEGWGRMGNYNKAKFYYMELVKFG 450


>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565353364|ref|XP_006343602.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 937

 Score =  277 bits (709), Expect = 2e-72
 Identities = 132/177 (74%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GLADVI+YNT+IAAYG+ KDF+NM + VKKM FNGFSVSLEAYNCMLD YGK  QMEKF+
Sbjct: 761  GLADVISYNTLIAAYGRSKDFKNMSSTVKKMHFNGFSVSLEAYNCMLDAYGKEGQMEKFR 820

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECG-VGANLCSYNTLIKA 357
            ++++R+K+S  SSDHYTY I+INIYGE GWIEEV+ VL+ELKE G +G +LCSYNTLIKA
Sbjct: 821  NVLERLKESGHSSDHYTYNIMINIYGELGWIEEVSNVLAELKESGSIGPDLCSYNTLIKA 880

Query: 358  YGIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            YGIAGM E AV +VKEMR+NGIEPD++TY NLI AL++ND FLEAVKWSLWMKQIG+
Sbjct: 881  YGIAGMVERAVDLVKEMRKNGIEPDRITYTNLINALRKNDKFLEAVKWSLWMKQIGL 937



 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 46/172 (26%), Positives = 90/172 (52%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           ++ T+  ++A Y +G            M+ N   +   AY+ ML  Y + R  +K ++I+
Sbjct: 277 NIATFGMLMALYQKGWHVEEAEFAFSMMR-NLKIMCQSAYSSMLTIYTRMRLYDKAEEII 335

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             ++      +   + +L+N Y +QG + E  +VL+ + E G   N+ +YNTLI  YG  
Sbjct: 336 GFLRKDEVILNLENWLVLLNAYCQQGKLLEAEQVLASMNEAGFSPNIVAYNTLITGYGKI 395

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
               +A  +  +++  G++PD+ TY ++I    R DN+ EA ++ + +K++G
Sbjct: 396 SNMLDAQRLFGDLKRVGVDPDETTYRSMIEGWGRTDNYEEANRYYVELKRLG 447



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
 Frame = +1

Query: 121  EAYNCMLDTYGKSRQMEKFKDIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSE 300
            E Y+C+++   ++  +++   +   M       +  T+ +++++YG+    +   EV S 
Sbjct: 697  EMYSCVINCCARALPVDELSRLFDEMLKRGFLPNTVTFNVMLDVYGKSRLFKRAREVFSM 756

Query: 301  LKECGVGANLCSYNTLIKAYGIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRA------ 462
             K+CG+ A++ SYNTLI AYG +   +   + VK+M  NG       Y  ++ A      
Sbjct: 757  AKKCGL-ADVISYNTLIAAYGRSKDFKNMSSTVKKMHFNGFSVSLEAYNCMLDAYGKEGQ 815

Query: 463  LQRNDNFLEAVKWS 504
            +++  N LE +K S
Sbjct: 816  MEKFRNVLERLKES 829


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  277 bits (708), Expect = 3e-72
 Identities = 128/176 (72%), Positives = 155/176 (88%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNT+IAAYG  KDF+NM + V+ MQF+GFSVSLEAYNCMLD YGK  QME F+
Sbjct: 780  GLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQMECFR 839

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
            +++QRMK S+ +SDHYTY I+INIYGEQGWI+EVA VL+EL+ECG+  +LCSYNTLIKAY
Sbjct: 840  NVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTLIKAY 899

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            G+AGM E+A+ +VKEMRENGIEPDK+TY NLI ALQ+ND +LEAVKWSLWMKQ+G+
Sbjct: 900  GVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKYLEAVKWSLWMKQLGL 955



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 45/172 (26%), Positives = 88/172 (51%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           ++ T+  ++  Y +G +      +  KM+  G  +   AY+ M+  Y +     K ++I+
Sbjct: 295 NIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGI-ICQSAYSAMITIYTRLSLYNKAEEII 353

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             M +   + +   + +L+N Y +QG +EE  +VL E++E     N+ ++NTLI  YG  
Sbjct: 354 GLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITGYGKL 413

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
                A  +  +++  G+EPD+ TY ++I    R  N+ EA  +   +K++G
Sbjct: 414 SNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLG 465


>ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like isoform X1 [Glycine max]
            gi|571450583|ref|XP_006578471.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 854

 Score =  276 bits (706), Expect = 5e-72
 Identities = 131/174 (75%), Positives = 150/174 (86%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVITYNTIIAAYG+ KDF NM + V+KM+F+GFSVSLEAYN MLD YGK  QME F+
Sbjct: 679  GLVDVITYNTIIAAYGKNKDFNNMSSTVQKMEFDGFSVSLEAYNSMLDAYGKDGQMETFR 738

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++Q+MKDSNC+SDHYTY  LINIYGEQGWI EVA VL+ELKECG+  +LCSYNTLIKAY
Sbjct: 739  SVLQKMKDSNCASDHYTYNTLINIYGEQGWINEVANVLTELKECGLRPDLCSYNTLIKAY 798

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQI 522
            GIAGM  EAV ++KEMR+NGIEPDK +Y NLI AL+RND FLEAVKWSLWMKQ+
Sbjct: 799  GIAGMVAEAVGLIKEMRKNGIEPDKKSYTNLITALRRNDKFLEAVKWSLWMKQM 852



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 45/178 (25%), Positives = 90/178 (50%), Gaps = 2/178 (1%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLE-AYNCMLDTYGKSRQMEKFKDI 186
           +V T   ++  Y +G +         +M+  GF +  E AY+ M+  Y + R  EK + +
Sbjct: 193 NVATIGMLMGLYRKGWNLEEAEFAFSRMR--GFRIVCESAYSSMITIYTRLRLYEKAEGV 250

Query: 187 MQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGI 366
           ++ M+      +   + +++N Y +QG + +   VL  ++E G   N+ ++NT+I  +G 
Sbjct: 251 IELMRKDEVVPNLENWLVMLNAYSQQGKLGDAERVLEAMQEAGFSDNIVAFNTMITGFGK 310

Query: 367 AGMAEEAVAV-VKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGMSSS 537
           A   + A  + ++  R   ++PD+ TY ++I    R DN+  A ++   +KQ+G   S
Sbjct: 311 ARRMDAAQRLFMRITRCLEVDPDETTYRSMIEGWGRADNYEYATRYYKELKQMGFKPS 368


>gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
          Length = 889

 Score =  274 bits (701), Expect = 2e-71
 Identities = 129/176 (73%), Positives = 150/176 (85%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNT+IAAYG+ KD   M +  K MQF GFSVSLEAYN MLD YGK RQME F+
Sbjct: 714  GLVDVISYNTLIAAYGRNKDLTKMSSAFKLMQFKGFSVSLEAYNSMLDAYGKERQMESFR 773

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++ +MK+SNC+SDHYTY I+INIYGEQGWI+EVAEVL +LKECG   +L SYNTLIKAY
Sbjct: 774  SVLHKMKESNCASDHYTYNIMINIYGEQGWIDEVAEVLKDLKECGFRPDLYSYNTLIKAY 833

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV +VKEMRENGIEPDKVTY+NLI A++RND FLEAVKWSLWMKQ+G+
Sbjct: 834  GIAGMVEDAVGLVKEMRENGIEPDKVTYVNLITAMKRNDEFLEAVKWSLWMKQMGL 889



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 43/172 (25%), Positives = 89/172 (51%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++  Y +  +         +M+  G +V   AY+ ++  Y +    EK ++++
Sbjct: 229 NVATFGMLMGLYQKSWNVEEAEFTFTRMRDLG-TVCQSAYSALITIYTRLNLYEKAEEVI 287

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             M++     +     +++N Y +QG +E+   VL+ +++ G   N+ +YNTLI  YG A
Sbjct: 288 GFMREDEVIPNLDNCLVMLNAYSQQGKLEDAEMVLASMQKSGFPPNIVAYNTLITGYGKA 347

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + A  +   +R  G+EP++ TY ++I    R DN+ E + +   +K++G
Sbjct: 348 SKMDAAQRLFTCIRNVGLEPNETTYRSMIEGWGRADNYKETIWYYQKLKKLG 399


>ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 885

 Score =  274 bits (701), Expect = 2e-71
 Identities = 125/175 (71%), Positives = 155/175 (88%)
 Frame = +1

Query: 4    LADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKD 183
            L D I+YNTIIAAYG+ KDF++M + V++MQ NGFSVSLEAYN MLD YGK  QME+F+ 
Sbjct: 711  LVDTISYNTIIAAYGRNKDFKSMSSAVREMQLNGFSVSLEAYNSMLDAYGKENQMEQFRS 770

Query: 184  IMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYG 363
            ++QRMK+++C SDH+TY  +INIYGEQGWI+EVA VL+ELKECG+G +LCSYNTLIKAYG
Sbjct: 771  VLQRMKETSCGSDHHTYNTMINIYGEQGWIDEVAGVLTELKECGLGPDLCSYNTLIKAYG 830

Query: 364  IAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            IAGM E+AV ++KEMRENG+EPDK+TYINLI AL++ND +LEAVKWSLWMKQ+G+
Sbjct: 831  IAGMVEDAVYLLKEMRENGVEPDKITYINLIAALRKNDEYLEAVKWSLWMKQMGL 885



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 49/172 (28%), Positives = 89/172 (51%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++A Y +G +         +M+  G  V   AY+ M+  Y +    E+ ++I+
Sbjct: 225 NVATFGMLMALYQKGWNVEEAEFTFSRMRNFGI-VCQSAYSAMITIYTRMSLYERAEEII 283

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             MK+     +   + ++IN Y +QG +E     +  +KE G   N+ +YNTLI  YG A
Sbjct: 284 GLMKEDGVIPNLDNWLVVINAYCQQGKVEAAELGVVSMKEAGFSPNIVAYNTLITGYGKA 343

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + A  +   +++ G+EPD+ TY ++I    R DN+ EA  +   +K++G
Sbjct: 344 SKMDAAHHLFLGIKKVGLEPDETTYRSMIEGWGRTDNYKEAYWYYKELKRLG 395


>ref|XP_002307852.2| hypothetical protein POPTR_0006s007001g, partial [Populus
            trichocarpa] gi|550335167|gb|EEE91375.2| hypothetical
            protein POPTR_0006s007001g, partial [Populus trichocarpa]
          Length = 738

 Score =  273 bits (699), Expect = 3e-71
 Identities = 124/176 (70%), Positives = 154/176 (87%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNTIIAAYG+ +DF+NM + +  MQF+GFSVSLEAYNC+LD YGK  QME F+
Sbjct: 563  GLVDVISYNTIIAAYGRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFR 622

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++QRMK+S+C++DHYTY I++NIYGE GWI+EVA VL+EL+ECG+G +LCSYNTLIKAY
Sbjct: 623  SVLQRMKNSSCTADHYTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAY 682

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV +VKEMR+NG+EPDK+TY NLI  LQ+ND +LEAVKWSLWMKQ G+
Sbjct: 683  GIAGMVEDAVGLVKEMRQNGVEPDKITYTNLITTLQKNDKYLEAVKWSLWMKQRGL 738



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 42/172 (24%), Positives = 84/172 (48%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++  Y +G +         +M+  G  +   AY+ M+  Y +    +K ++++
Sbjct: 78  NVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGI-ICQSAYSAMITIYTRLSLYDKAEEVI 136

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             M+D     +   + +L+N Y +QG +E+  ++L  ++E      + +YN LI  YG A
Sbjct: 137 GLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILITGYGKA 196

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
                A  +   ++  G+EPD  TY ++I    R  N+ EA  +   +K++G
Sbjct: 197 SNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLG 248


>ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citrus clementina]
            gi|557556791|gb|ESR66805.1| hypothetical protein
            CICLE_v10007430mg [Citrus clementina]
          Length = 851

 Score =  272 bits (696), Expect = 7e-71
 Identities = 127/176 (72%), Positives = 153/176 (86%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNTIIAAYGQ K+  +M + V++MQF+GFSVSLEAYN MLD YGK  QME FK
Sbjct: 674  GLVDVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLEAYNSMLDAYGKEGQMENFK 733

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
            ++++RMK+++C+ DHYTY I+I+IYGEQGWI EV  VL+ELKECG+  +LCSYNTLIKAY
Sbjct: 734  NVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAY 793

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV +VKEMRENGIEPDK+TY N+I ALQRND FLEA+KWSLWMKQIG+
Sbjct: 794  GIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRNDKFLEAIKWSLWMKQIGL 849



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 43/172 (25%), Positives = 86/172 (50%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++  Y +            +M+  G  V   AY+ M+  Y +    EK ++++
Sbjct: 189 NVATFGMLMGLYKKSWSVEEAEFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVI 247

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
           + +++     +   + +++N Y +QG +EE   VL  ++E G   N+ +YNTLI  YG  
Sbjct: 248 RLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLITGYGKV 307

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + +  +   +++ G+EPD+ TY ++I    R  N+ EA  +   +K +G
Sbjct: 308 SNMDASQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLG 359



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 2/162 (1%)
 Frame = +1

Query: 31  IIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIMQRMKDSN 210
           ++ AY Q         ++  M+  GFS ++ AYN ++  YGK   M+  + +   +KD  
Sbjct: 265 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLITGYGKVSNMDASQRLFLSIKDVG 324

Query: 211 CSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIAGMAEEAV 390
              D  TY  +I  +G  G   E      ELK  G   N  +  TLI         E AV
Sbjct: 325 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLQAKYEDEEGAV 384

Query: 391 AVVKEMRENGIEPDKV--TYINLIRALQRNDNFLEAVKWSLW 510
             + +M + G +   +  T +       R DN    +K SL+
Sbjct: 385 NTLDDMLKMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLY 426


>ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutrema salsugineum]
            gi|557113835|gb|ESQ54118.1| hypothetical protein
            EUTSA_v10024344mg [Eutrema salsugineum]
          Length = 916

 Score =  271 bits (694), Expect = 1e-70
 Identities = 127/176 (72%), Positives = 148/176 (84%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            G+ DVI+YNTIIAAYGQ KDF NM + ++ MQF+GFSVSLEAYN MLD YGK +QMEKF+
Sbjct: 741  GVVDVISYNTIIAAYGQNKDFTNMSSAIRNMQFDGFSVSLEAYNSMLDAYGKDKQMEKFR 800

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             I+ RMK S C +DHYTY I+INIYGEQGWI+EV +VL ELKE G+G +LCSYNTLIKAY
Sbjct: 801  SILNRMKKSTCETDHYTYNIMINIYGEQGWIDEVTDVLRELKESGLGPDLCSYNTLIKAY 860

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GI GM EEAV +VKEMR  GI PDKVTY NL+ AL+RND FLEA+KWSLWMKQ+G+
Sbjct: 861  GIGGMVEEAVGLVKEMRVKGITPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 916



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 44/172 (25%), Positives = 86/172 (50%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T   ++  Y + ++          M+  G  V   AY+ M+  Y + R   K ++++
Sbjct: 256 NVATIGMLMGLYQKNRNVDEAEFAFTHMRRFGI-VCESAYSAMITLYTRLRLYGKAEEVI 314

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
             MK+     +   + +++N Y +QG +E+   VL  ++  G   N+ +YNT+I  YG  
Sbjct: 315 HLMKEDRVRLNLENWLVVLNAYSQQGKMEQAESVLISMEAAGFSPNIIAYNTIITGYGKV 374

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              E A ++   + + G+EPD+ +Y ++I    R DN+ EA  +   +K++G
Sbjct: 375 SKMEAAQSLFNRLCDIGLEPDETSYRSMIEGWGRADNYKEAKCYYQELKRLG 426


>ref|XP_003595651.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484699|gb|AES65902.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  270 bits (690), Expect = 3e-70
 Identities = 128/174 (73%), Positives = 150/174 (86%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVITYNTII +YG+ KDFRNM   V+KMQF+GFSVSLEAYN MLD YGK  QM+ F+
Sbjct: 610  GLVDVITYNTIIDSYGKKKDFRNMSRTVRKMQFDGFSVSLEAYNSMLDAYGKDSQMDAFR 669

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             +++ MK+SNC+SD YTY I+INIYGEQGWIEEV++VL+EL ECG+  +LCSYNTLIKAY
Sbjct: 670  SVLKMMKESNCASDLYTYNIVINIYGEQGWIEEVSDVLAELNECGLRPDLCSYNTLIKAY 729

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQI 522
            GIAGM EEAV ++KEMR+NGIEPD+ TY NLI AL+RND FLEAVKWSLWMKQI
Sbjct: 730  GIAGMVEEAVELIKEMRKNGIEPDQTTYTNLINALKRNDKFLEAVKWSLWMKQI 783


>ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Capsella rubella]
            gi|482554241|gb|EOA18434.1| hypothetical protein
            CARUB_v10006977mg [Capsella rubella]
          Length = 907

 Score =  269 bits (688), Expect = 6e-70
 Identities = 129/176 (73%), Positives = 150/176 (85%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            G+ DVI+YNTIIAAYGQ KDF+NM + +K MQF+GFSVSLEAYN MLD YGK +QMEKF+
Sbjct: 733  GVVDVISYNTIIAAYGQNKDFKNMSSAIKNMQFDGFSVSLEAYNSMLDAYGKDKQMEKFR 792

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             I++RMK S C SDHYTY I+INIYGEQGWI+EV EVL+ELKE G+G +LCSYNTLIKAY
Sbjct: 793  SILKRMK-STCGSDHYTYNIMINIYGEQGWIDEVTEVLTELKESGLGPDLCSYNTLIKAY 851

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GI GM EEAV +VKEMR   I PDKVTY NL+ AL+RND FLEA+KWSLWMKQ+G+
Sbjct: 852  GIGGMVEEAVGLVKEMRGKKIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 907



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
 Frame = +1

Query: 94  QFNGFSVSLE-AYNCMLDTYGKSRQMEKFKDIMQRMKDSNCSSDHYTYCILINIYGEQGW 270
           Q   F +  E AY+ M+  Y + R   K ++++  MK          + +++N Y +QG 
Sbjct: 274 QMRKFGIVCESAYSAMITIYTRLRLYVKAEEVIDLMKKDRVRLKLENWLVMLNAYSQQGK 333

Query: 271 IEEVAEVLSELKECGVGANLCSYNTLIKAYGIAGMAEEAVAVVKEMRENGIEPDKVTYIN 450
           +E+   VL+ ++  G   N+ +YNTLI  YG     E A ++     + GIEPD+ +Y +
Sbjct: 334 MEQAESVLTSMEAAGFSQNIIAYNTLITGYGKVSKMEAAQSLFHRFYDIGIEPDETSYRS 393

Query: 451 LIRALQRNDNFLEAVKWSLWMKQIG 525
           +I    R DN+ EA  +   +KQ+G
Sbjct: 394 MIEGWGRADNYDEAKHYYQELKQLG 418



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 37/141 (26%), Positives = 62/141 (43%)
 Frame = +1

Query: 31  IIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIMQRMKDSN 210
           ++ AY Q        +++  M+  GFS ++ AYN ++  YGK  +ME  + +  R  D  
Sbjct: 324 MLNAYSQQGKMEQAESVLTSMEAAGFSQNIIAYNTLITGYGKVSKMEAAQSLFHRFYDIG 383

Query: 211 CSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIAGMAEEAV 390
              D  +Y  +I  +G     +E      ELK+ G   N  +  TLI      G  + A+
Sbjct: 384 IEPDETSYRSMIEGWGRADNYDEAKHYYQELKQLGYKPNSSNLFTLINLQAKYGDKDGAI 443

Query: 391 AVVKEMRENGIEPDKVTYINL 453
             +K+M   G +   +  I L
Sbjct: 444 KTIKDMVNIGCQYSSILGIIL 464


>ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Citrus sinensis]
          Length = 915

 Score =  268 bits (685), Expect = 1e-69
 Identities = 125/176 (71%), Positives = 152/176 (86%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVI+YNTIIAAYGQ K+  +M + V++MQ +GFSVSLEAYN MLD YGK  QME FK
Sbjct: 738  GLVDVISYNTIIAAYGQNKNLESMSSTVQEMQVDGFSVSLEAYNSMLDAYGKEGQMENFK 797

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
            ++++RMK+++C+ DHYTY I+I+IYGEQGWI EV  VL+ELKECG+  +LCSYNTLIKAY
Sbjct: 798  NVLRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAY 857

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GIAGM E+AV +VKEMRENGIEPDK+TY N+I AL+RND FLEA+KWSLWMKQIG+
Sbjct: 858  GIAGMVEDAVGLVKEMRENGIEPDKITYTNMITALRRNDKFLEAIKWSLWMKQIGL 913



 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 44/172 (25%), Positives = 87/172 (50%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++  Y +  +         +M+  G  V   AY+ M+  Y +    EK ++++
Sbjct: 253 NVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGL-VCESAYSAMITIYTRLSLYEKAEEVI 311

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
           + +++     +   + +++N Y +QG +EE   VL  ++E G   N+ +YNTL+  YG  
Sbjct: 312 RLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKV 371

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              E A  +   +++ G+EPD+ TY ++I    R  N+ EA  +   +K +G
Sbjct: 372 SNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLG 423



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 2/162 (1%)
 Frame = +1

Query: 31  IIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIMQRMKDSN 210
           ++ AY Q         ++  M+  GFS ++ AYN ++  YGK   ME  + +   +KD  
Sbjct: 329 MLNAYSQQGKLEEAELVLVSMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVG 388

Query: 211 CSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIAGMAEEAV 390
              D  TY  +I  +G  G   E      ELK  G   N  +  TLI  +      E AV
Sbjct: 389 LEPDETTYRSMIEGWGRAGNYREAKWYYKELKHLGYKPNASNLYTLINLHAKYEDEEGAV 448

Query: 391 AVVKEMRENGIEPDKV--TYINLIRALQRNDNFLEAVKWSLW 510
             + +M   G +   +  T +       R DN    +K SL+
Sbjct: 449 NTLDDMLNMGCQHSSILGTLLQAYEKAGRTDNVPRILKGSLY 490


>ref|XP_004488390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Cicer arietinum]
          Length = 782

 Score =  266 bits (681), Expect = 4e-69
 Identities = 124/174 (71%), Positives = 149/174 (85%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL DVITYNTIIAAYG+ KDF NM + V KMQF+GFSVSLE+YN MLD YGK  QM+ F+
Sbjct: 607  GLVDVITYNTIIAAYGKNKDFNNMSSTVHKMQFDGFSVSLESYNSMLDAYGKDGQMDTFR 666

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++Q MK+SNC+SDHYTY  +INIYGEQGWI+EVA+VL++L ECG+  +LCSYNTLIKAY
Sbjct: 667  SVLQMMKESNCASDHYTYNTVINIYGEQGWIDEVADVLAKLNECGLRPDLCSYNTLIKAY 726

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQI 522
            GIAGM E AV ++KEMR+NGIEPD+ TY NL+ AL+RND +LEAVKWSLWMKQ+
Sbjct: 727  GIAGMVEAAVDLIKEMRKNGIEPDRKTYSNLVTALKRNDKYLEAVKWSLWMKQL 780



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
 Frame = +1

Query: 19  TYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIMQRM 198
           T+  ++  Y +G +       + +M+  G  V   AY+ M+  Y +    EK + +++ M
Sbjct: 121 TFGMLMRLYQKGLNMEEAEFTMSQMKLFGI-VCESAYSSMITIYNRLGLFEKAEGVIELM 179

Query: 199 KDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKE-----CGVGANLCSYNTLIKAYG 363
           K      +   + +++N Y +QG + +   VL  ++E     C    N+  YNT+I  YG
Sbjct: 180 KKEAMVLNLENWLVILNTYCQQGKMADAERVLVTMEEEARFCCD---NIVVYNTMITGYG 236

Query: 364 IAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGMSSS 537
            A   + A ++   +R   IEPD+ +Y ++I    R DN+ +A  +   +K++G   S
Sbjct: 237 KASNMDCAESLFLSLR---IEPDETSYRSMIEGWGRADNYEKARWYYEELKRLGYKPS 291


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  266 bits (679), Expect = 7e-69
 Identities = 124/174 (71%), Positives = 149/174 (85%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            GL D I+YNT+I+ YG+ KDF+NM + V+KM+FNGFSVSLEAYNCMLD YGK  QME F+
Sbjct: 719  GLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFR 778

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             ++QRM++++   DHYTY I+INIYGEQGWI+EVAEVL+ELK CG+  +L SYNTLIKAY
Sbjct: 779  SVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAY 838

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQI 522
            GIAGM EEA  +VKEMRE  IEPD++TYIN+IRALQRND FLEAVKWSLWMKQ+
Sbjct: 839  GIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 892



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 45/172 (26%), Positives = 88/172 (51%)
 Frame = +1

Query: 10  DVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIM 189
           +V T+  ++  Y +  D +       +M+  G  V   AY  M+  Y +    +K ++++
Sbjct: 234 NVATFGMLMGLYQKKCDIKESEFAFNQMRNFGI-VCETAYASMITIYIRMNLYDKAEEVI 292

Query: 190 QRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIA 369
           Q M++     +   + +++N Y +QG +EE   V + ++E G  +N+ +YNTLI  YG A
Sbjct: 293 QLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKA 352

Query: 370 GMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIG 525
              + A  +   ++ +G+EPD+ TY ++I    R  N+  A  +   +K+ G
Sbjct: 353 SNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRG 404


>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635625|sp|O65567.2|PP342_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g30825, chloroplastic; Flags: Precursor
            gi|332660415|gb|AEE85815.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  263 bits (673), Expect = 3e-68
 Identities = 124/176 (70%), Positives = 147/176 (83%)
 Frame = +1

Query: 1    GLADVITYNTIIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFK 180
            G+ DVI+YNTIIAAYG+ KD+ NM + +K MQF+GFSVSLEAYN +LD YGK +QMEKF+
Sbjct: 729  GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFR 788

Query: 181  DIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAY 360
             I++RMK S    DHYTY I+INIYGEQGWI+EVA+VL ELKE G+G +LCSYNTLIKAY
Sbjct: 789  SILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAY 848

Query: 361  GIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNFLEAVKWSLWMKQIGM 528
            GI GM EEAV +VKEMR   I PDKVTY NL+ AL+RND FLEA+KWSLWMKQ+G+
Sbjct: 849  GIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904



 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 38/134 (28%), Positives = 68/134 (50%)
 Frame = +1

Query: 124 AYNCMLDTYGKSRQMEKFKDIMQRMKDSNCSSDHYTYCILINIYGEQGWIEEVAEVLSEL 303
           AY+ M+  Y + R  +K ++++  MK          + +++N Y +QG +E    +L  +
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340

Query: 304 KECGVGANLCSYNTLIKAYGIAGMAEEAVAVVKEMRENGIEPDKVTYINLIRALQRNDNF 483
           +  G   N+ +YNTLI  YG     E A  +   +   G+EPD+ +Y ++I    R DN+
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400

Query: 484 LEAVKWSLWMKQIG 525
            EA  +   +K+ G
Sbjct: 401 EEAKHYYQELKRCG 414



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 38/141 (26%), Positives = 63/141 (44%)
 Frame = +1

Query: 31  IIAAYGQGKDFRNMRAIVKKMQFNGFSVSLEAYNCMLDTYGKSRQMEKFKDIMQRMKDSN 210
           ++ AY Q        +I+  M+  GFS ++ AYN ++  YGK  +ME  + +  R+ +  
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379

Query: 211 CSSDHYTYCILINIYGEQGWIEEVAEVLSELKECGVGANLCSYNTLIKAYGIAGMAEEAV 390
              D  +Y  +I  +G     EE      ELK CG   N  +  TLI      G  + A+
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439

Query: 391 AVVKEMRENGIEPDKVTYINL 453
             +++M   G +   +  I L
Sbjct: 440 KTIEDMTGIGCQYSSILGIIL 460