BLASTX nr result
ID: Cocculus22_contig00007207
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00007207
(435 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338371.1| PREDICTED: ribosome biogenesis protein WDR12... 77 2e-12
ref|XP_006850754.1| hypothetical protein AMTR_s00025p00071700 [A... 77 2e-12
ref|XP_004232168.1| PREDICTED: ribosome biogenesis protein WDR12... 77 2e-12
ref|XP_006482744.1| PREDICTED: ribosome biogenesis protein WDR12... 75 1e-11
ref|XP_006359638.1| PREDICTED: ribosome biogenesis protein WDR12... 75 1e-11
ref|XP_006431288.1| hypothetical protein CICLE_v10011739mg [Citr... 75 1e-11
ref|XP_006431287.1| hypothetical protein CICLE_v10011739mg [Citr... 75 1e-11
gb|EMT17040.1| hypothetical protein F775_31318 [Aegilops tauschii] 75 1e-11
gb|EMS59693.1| Ribosome biogenesis protein WDR12-like protein [T... 75 1e-11
ref|XP_004230897.1| PREDICTED: ribosome biogenesis protein WDR12... 75 1e-11
ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12... 75 1e-11
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera] 75 1e-11
ref|XP_004963068.1| PREDICTED: ribosome biogenesis protein WDR12... 74 2e-11
ref|XP_004958219.1| PREDICTED: ribosome biogenesis protein WDR12... 74 2e-11
ref|XP_002306071.1| hypothetical protein POPTR_0004s11880g [Popu... 74 3e-11
ref|NP_001131371.1| uncharacterized protein LOC100192696 [Zea ma... 74 3e-11
gb|EYU34608.1| hypothetical protein MIMGU_mgv1a017726mg [Mimulus... 73 4e-11
ref|XP_003562746.1| PREDICTED: ribosome biogenesis protein WDR12... 73 4e-11
ref|XP_006658773.1| PREDICTED: ribosome biogenesis protein WDR12... 72 6e-11
ref|XP_002324109.2| hypothetical protein POPTR_0017s12880g [Popu... 72 6e-11
>ref|XP_006338371.1| PREDICTED: ribosome biogenesis protein WDR12 homolog isoform X1
[Solanum tuberosum] gi|565342478|ref|XP_006338372.1|
PREDICTED: ribosome biogenesis protein WDR12 homolog
isoform X2 [Solanum tuberosum]
Length = 440
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LAVID+HKDKVLCADWWKG+S+ISGGAD+KLCISS+V +L
Sbjct: 401 LAVIDTHKDKVLCADWWKGESVISGGADSKLCISSDVCVL 440
>ref|XP_006850754.1| hypothetical protein AMTR_s00025p00071700 [Amborella trichopoda]
gi|548854425|gb|ERN12335.1| hypothetical protein
AMTR_s00025p00071700 [Amborella trichopoda]
Length = 434
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
LAVIDSHKDKVLCADWW GDS+ISGGAD KLCISSE+ I
Sbjct: 395 LAVIDSHKDKVLCADWWNGDSVISGGADGKLCISSEICI 433
>ref|XP_004232168.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
lycopersicum]
Length = 441
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LAVID+HKDKVLCADWWKG+S+ISGGAD+KLCISS+V +L
Sbjct: 402 LAVIDTHKDKVLCADWWKGESVISGGADSKLCISSDVCVL 441
>ref|XP_006482744.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Citrus
sinensis]
Length = 440
Score = 75.1 bits (183), Expect = 1e-11
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
L+VIDSHKDKVLCADWW+GDS+ISGG D+KLC+SS VSI
Sbjct: 401 LSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVSI 439
>ref|XP_006359638.1| PREDICTED: ribosome biogenesis protein WDR12 homolog isoform X1
[Solanum tuberosum] gi|565387726|ref|XP_006359639.1|
PREDICTED: ribosome biogenesis protein WDR12 homolog
isoform X2 [Solanum tuberosum]
Length = 440
Score = 75.1 bits (183), Expect = 1e-11
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LAVID+H DKVLCADWWKG+S++SGGAD+KLCISS+V +L
Sbjct: 401 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 440
>ref|XP_006431288.1| hypothetical protein CICLE_v10011739mg [Citrus clementina]
gi|557533345|gb|ESR44528.1| hypothetical protein
CICLE_v10011739mg [Citrus clementina]
Length = 440
Score = 75.1 bits (183), Expect = 1e-11
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
L+VIDSHKDKVLCADWW+GDS+ISGG D+KLC+SS VSI
Sbjct: 401 LSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVSI 439
>ref|XP_006431287.1| hypothetical protein CICLE_v10011739mg [Citrus clementina]
gi|557533344|gb|ESR44527.1| hypothetical protein
CICLE_v10011739mg [Citrus clementina]
Length = 428
Score = 75.1 bits (183), Expect = 1e-11
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
L+VIDSHKDKVLCADWW+GDS+ISGG D+KLC+SS VSI
Sbjct: 389 LSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVSI 427
>gb|EMT17040.1| hypothetical protein F775_31318 [Aegilops tauschii]
Length = 435
Score = 75.1 bits (183), Expect = 1e-11
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
LA +DSHKDKVLCADWWKGDS+ISGGAD+KLCISS V I
Sbjct: 396 LASVDSHKDKVLCADWWKGDSVISGGADSKLCISSGVEI 434
>gb|EMS59693.1| Ribosome biogenesis protein WDR12-like protein [Triticum urartu]
Length = 399
Score = 75.1 bits (183), Expect = 1e-11
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
LA +DSHKDKVLCADWWKGDS+ISGGAD+KLCISS V I
Sbjct: 360 LASVDSHKDKVLCADWWKGDSVISGGADSKLCISSGVEI 398
>ref|XP_004230897.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
lycopersicum]
Length = 434
Score = 75.1 bits (183), Expect = 1e-11
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LAVID+H DKVLCADWWKG+S++SGGAD+KLCISS+V +L
Sbjct: 395 LAVIDTHNDKVLCADWWKGESVVSGGADSKLCISSDVCVL 434
>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
product [Vitis vinifera]
Length = 438
Score = 75.1 bits (183), Expect = 1e-11
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
LAVIDSH +KVLCADWWKGDS++SGGAD+KLCISSE+ +
Sbjct: 399 LAVIDSHNNKVLCADWWKGDSVVSGGADSKLCISSEIPV 437
>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
Length = 427
Score = 75.1 bits (183), Expect = 1e-11
Identities = 31/39 (79%), Positives = 37/39 (94%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
LAVIDSH +KVLCADWWKGDS++SGGAD+KLCISSE+ +
Sbjct: 388 LAVIDSHNNKVLCADWWKGDSVVSGGADSKLCISSEIPV 426
>ref|XP_004963068.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Setaria
italica]
Length = 435
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LA +DSHKDKVLCADWWKGDS+ISGGAD+KLCI+S + I+
Sbjct: 396 LASVDSHKDKVLCADWWKGDSVISGGADSKLCIASGIEIV 435
>ref|XP_004958219.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Setaria
italica]
Length = 435
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LA +DSHKDKVLCADWWKGDS+ISGGAD+KLCI+S + I+
Sbjct: 396 LASVDSHKDKVLCADWWKGDSVISGGADSKLCIASGIEIV 435
>ref|XP_002306071.1| hypothetical protein POPTR_0004s11880g [Populus trichocarpa]
gi|222849035|gb|EEE86582.1| hypothetical protein
POPTR_0004s11880g [Populus trichocarpa]
Length = 118
Score = 73.6 bits (179), Expect = 3e-11
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSI 120
L +IDSH+DKVLCADWWKGDS+ISGG D+KLCISS +S+
Sbjct: 79 LVIIDSHEDKVLCADWWKGDSVISGGVDSKLCISSGISV 117
>ref|NP_001131371.1| uncharacterized protein LOC100192696 [Zea mays]
gi|194691344|gb|ACF79756.1| unknown [Zea mays]
gi|414887469|tpg|DAA63483.1| TPA: hypothetical protein
ZEAMMB73_256404 [Zea mays] gi|414887470|tpg|DAA63484.1|
TPA: hypothetical protein ZEAMMB73_256404 [Zea mays]
Length = 434
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LA +DSH+DKVLCADWWKGDS+ISGGAD+KLCISS + I+
Sbjct: 395 LASVDSHEDKVLCADWWKGDSVISGGADSKLCISSGIQIV 434
>gb|EYU34608.1| hypothetical protein MIMGU_mgv1a017726mg [Mimulus guttatus]
Length = 448
Score = 73.2 bits (178), Expect = 4e-11
Identities = 30/40 (75%), Positives = 38/40 (95%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LAVID+HKDKVLCADWW+ DS++SGGAD+KLCISS +S++
Sbjct: 408 LAVIDTHKDKVLCADWWREDSVVSGGADSKLCISSGISVV 447
>ref|XP_003562746.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Brachypodium
distachyon]
Length = 436
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LA +DSHKDKVLCADWWKG+S+ISGGAD+KLCISS + I+
Sbjct: 397 LASVDSHKDKVLCADWWKGNSVISGGADSKLCISSGIDIV 436
>ref|XP_006658773.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Oryza
brachyantha]
Length = 436
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LA +DSHKDKVLC DWWKGDS+ISGGAD+KLCI+S + I+
Sbjct: 397 LASVDSHKDKVLCVDWWKGDSVISGGADSKLCIASGIEIV 436
>ref|XP_002324109.2| hypothetical protein POPTR_0017s12880g [Populus trichocarpa]
gi|550320162|gb|EEF04242.2| hypothetical protein
POPTR_0017s12880g [Populus trichocarpa]
Length = 437
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = +1
Query: 4 LAVIDSHKDKVLCADWWKGDSIISGGADAKLCISSEVSIL 123
LA+IDSH+DKVLCADWWKGDS+ISGG D+KL ISS VS+L
Sbjct: 398 LAIIDSHEDKVLCADWWKGDSVISGGVDSKLRISSGVSVL 437