BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00006966
         (651 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   343   3e-92
ref|XP_002318044.1| exonuclease-related family protein [Populus ...   338   1e-90
ref|XP_007036203.1| PNAS-3 related isoform 1 [Theobroma cacao] g...   333   3e-89
ref|XP_007209525.1| hypothetical protein PRUPE_ppa010609mg [Prun...   327   3e-87
gb|EYU42566.1| hypothetical protein MIMGU_mgv1a012779mg [Mimulus...   323   2e-86
ref|XP_006476772.1| PREDICTED: putative exosome complex componen...   323   4e-86
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr...   323   4e-86
ref|XP_006294895.1| hypothetical protein CARUB_v10023945mg [Caps...   322   6e-86
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   321   1e-85
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   320   3e-85
ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [A...   318   7e-85
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809...   318   9e-85
ref|XP_004241525.1| PREDICTED: putative exosome complex componen...   317   2e-84
ref|XP_004298940.1| PREDICTED: putative exosome complex componen...   315   8e-84
ref|XP_006347458.1| PREDICTED: putative exosome complex componen...   313   2e-83
ref|XP_007036205.1| PNAS-3 related isoform 3 [Theobroma cacao] g...   313   2e-83
ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arab...   312   7e-83
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ...   312   7e-83
gb|EAY76792.1| hypothetical protein OsI_04749 [Oryza sativa Indi...   310   2e-82
dbj|BAD87535.1| ALM beta-like [Oryza sativa Japonica Group] gi|1...   310   2e-82

>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  343 bits (879), Expect = 3e-92
 Identities = 172/195 (88%), Positives = 180/195 (92%)
 Frame = -2

Query: 587 SSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKYWVE 408
           ++PASF+DQ VVPGDVVLDLS+M NQTIKLG GL QD DAITV KAG+LRFSKPNKYWVE
Sbjct: 4   NTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVE 63

Query: 407 SSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAGTLL 228
           SS KRYVPCV DTVLGIV+DSKA+NFLVDIKG  LA LPVLAFEGGTRRNIPKFEAGTLL
Sbjct: 64  SSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLL 123

Query: 227 YARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEALGK 48
           Y RVVKAN+GMNPELSCTDASGKAAEFG LKDG MFESSTGLSRMLLSSPTCP LEALGK
Sbjct: 124 YVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGK 183

Query: 47  KLSFEIAVGLNGRVW 3
           KLSFEIAVGLNGRVW
Sbjct: 184 KLSFEIAVGLNGRVW 198


>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
           gi|118482713|gb|ABK93275.1| unknown [Populus
           trichocarpa] gi|222858717|gb|EEE96264.1|
           exonuclease-related family protein [Populus trichocarpa]
          Length = 242

 Score =  338 bits (866), Expect = 1e-90
 Identities = 168/201 (83%), Positives = 180/201 (89%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           ++ K S SPA+FID  VVPGDVV+DLS M NQTIKLG GLRQD DAI+V+KAGKLRFSKP
Sbjct: 1   MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           NKYWVE+S KRYVPC  D+VLGIV+DSK++NFL+DIKG  LA LPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           EAGTLLY RVVKAN GMNPELSCTDASGKAAEFG LKDG MFE STGLSRMLLSSPTCP 
Sbjct: 121 EAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180

Query: 65  LEALGKKLSFEIAVGLNGRVW 3
           LEALGKKLSFEIAVGLNGRVW
Sbjct: 181 LEALGKKLSFEIAVGLNGRVW 201


>ref|XP_007036203.1| PNAS-3 related isoform 1 [Theobroma cacao]
           gi|508773448|gb|EOY20704.1| PNAS-3 related isoform 1
           [Theobroma cacao]
          Length = 240

 Score =  333 bits (854), Expect = 3e-89
 Identities = 168/201 (83%), Positives = 177/201 (88%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           +++K S SP S ID TVVPGDVVLDLS M NQTI LG GLRQD DAI+V+KAG LRFSKP
Sbjct: 1   MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           NKYWVESS KRY PCV DTVLGIV+DSKA+NFL+DIKG  LA LPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVESSQKRYTPCVEDTVLGIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           E GTLLY RVVKAN GMNPELSCTDASGKAAEFG LKDG MFE+STGLSR LLSSPTCP 
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180

Query: 65  LEALGKKLSFEIAVGLNGRVW 3
           LEALGKKLSFEIAVGLNGRVW
Sbjct: 181 LEALGKKLSFEIAVGLNGRVW 201


>ref|XP_007209525.1| hypothetical protein PRUPE_ppa010609mg [Prunus persica]
           gi|462405260|gb|EMJ10724.1| hypothetical protein
           PRUPE_ppa010609mg [Prunus persica]
          Length = 243

 Score =  327 bits (837), Expect = 3e-87
 Identities = 160/199 (80%), Positives = 174/199 (87%)
 Frame = -2

Query: 599 EKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNK 420
           EK + SPASF+DQ+VVPGDVVLDL+ M NQTIKLG GLRQD DAI  +KAG L+FSKPNK
Sbjct: 3   EKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFSKPNK 62

Query: 419 YWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEA 240
           YWVE+S KRYVPC GD+VLGIV DSKA+NFLVDIKG T+A LPVLAFEGGTRRNIPKFE 
Sbjct: 63  YWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNIPKFEV 122

Query: 239 GTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALE 60
           GTLLY RVVKAN GMNPELSC DASGKAAE+G LKDG MFE STGLS+MLLSSP CP LE
Sbjct: 123 GTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSSPRCPVLE 182

Query: 59  ALGKKLSFEIAVGLNGRVW 3
           ALGK +SFE A+GLNGRVW
Sbjct: 183 ALGKNISFETAIGLNGRVW 201


>gb|EYU42566.1| hypothetical protein MIMGU_mgv1a012779mg [Mimulus guttatus]
          Length = 240

 Score =  323 bits (829), Expect = 2e-86
 Identities = 160/201 (79%), Positives = 177/201 (88%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           ++ K S +P+SFIDQ V PGD+VLDLS+M NQTIKLG GL QD D I+V+KAGKLRFSKP
Sbjct: 1   MEAKPSVAPSSFIDQQVFPGDLVLDLSKMTNQTIKLGGGLCQDGDVISVMKAGKLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           NKYWVESSHKRYVP VGD VLGIV++++A+NF VDIKG  LA LPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVESSHKRYVPSVGDNVLGIVVEARADNFFVDIKGPALAFLPVLAFEGGTRRNIPKF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           E GTLLY RVVKAN+GMNPELSCTDA GKAAE+G LKDG MFESSTGLSR LLSSPTCP 
Sbjct: 121 ETGTLLYVRVVKANTGMNPELSCTDAMGKAAEYGPLKDGFMFESSTGLSRTLLSSPTCPV 180

Query: 65  LEALGKKLSFEIAVGLNGRVW 3
           LE LGKK++FEIAVGLNGRVW
Sbjct: 181 LETLGKKIAFEIAVGLNGRVW 201


>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
           [Citrus sinensis] gi|568845839|ref|XP_006476773.1|
           PREDICTED: putative exosome complex component rrp40-like
           isoform X2 [Citrus sinensis]
          Length = 238

 Score =  323 bits (827), Expect = 4e-86
 Identities = 159/194 (81%), Positives = 174/194 (89%)
 Frame = -2

Query: 584 SPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKYWVES 405
           S A+ +D+ VVPGDVVLDLS M NQTIKLG GLRQ+ D+++V+KAGKLRFSKPNKYWVES
Sbjct: 6   STANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNKYWVES 65

Query: 404 SHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAGTLLY 225
           S KRYVPCV DTVLGIV+D KA+NF VDI+G T+A LPVLAFEGGTRRNIPKFE G+LLY
Sbjct: 66  SQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLY 125

Query: 224 ARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEALGKK 45
            RVVKAN GMNPELSCTDASGKAAEFG LKDG MFE+STGLSRMLLSSPTCP LE LGK+
Sbjct: 126 VRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLEELGKQ 185

Query: 44  LSFEIAVGLNGRVW 3
           LSFEIAVGLNGRVW
Sbjct: 186 LSFEIAVGLNGRVW 199


>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
           gi|567894648|ref|XP_006439812.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
           gi|557542073|gb|ESR53051.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
           gi|557542074|gb|ESR53052.1| hypothetical protein
           CICLE_v10021986mg [Citrus clementina]
          Length = 238

 Score =  323 bits (827), Expect = 4e-86
 Identities = 158/194 (81%), Positives = 174/194 (89%)
 Frame = -2

Query: 584 SPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKYWVES 405
           S  + +D+ VVPGDVVLDLS M NQTIKLG GLRQ+ D+++V+KAGKLRFSKPNKYWVES
Sbjct: 6   STTNLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNKYWVES 65

Query: 404 SHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAGTLLY 225
           SHKRYVPCV DTVLGIV+D KA+NF VDI+G T+A LPVLAFEGGTRRNIPKFE G+LLY
Sbjct: 66  SHKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLY 125

Query: 224 ARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEALGKK 45
            RVVKAN GMNPELSCTDASGKAAEFG LKDG MFE+S+GLSRMLLSSPTCP LE LGK+
Sbjct: 126 VRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSSGLSRMLLSSPTCPVLEELGKQ 185

Query: 44  LSFEIAVGLNGRVW 3
           LSFEIAVGLNGRVW
Sbjct: 186 LSFEIAVGLNGRVW 199


>ref|XP_006294895.1| hypothetical protein CARUB_v10023945mg [Capsella rubella]
           gi|482563603|gb|EOA27793.1| hypothetical protein
           CARUB_v10023945mg [Capsella rubella]
          Length = 241

 Score =  322 bits (825), Expect = 6e-86
 Identities = 161/198 (81%), Positives = 174/198 (87%)
 Frame = -2

Query: 596 KLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKY 417
           ++S+SP S I QTVVPGDVVLDLS M NQTIKLG GLRQD DAI+ ++AGK RFSKPNKY
Sbjct: 4   EVSTSPTSLIGQTVVPGDVVLDLSNMTNQTIKLGSGLRQDNDAISAMRAGKFRFSKPNKY 63

Query: 416 WVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAG 237
           WVESSHKRY+P   DTVLGIV+DSK++NF VDIKG  LALLPVLAFEGGTRRNIPKFE G
Sbjct: 64  WVESSHKRYIPRPEDTVLGIVVDSKSDNFWVDIKGPQLALLPVLAFEGGTRRNIPKFEVG 123

Query: 236 TLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEA 57
           TLLY RVVK N+GMNPE+SCTDASGKAA FG LKDG MFE+STGLSRMLLSSPTCP LEA
Sbjct: 124 TLLYVRVVKTNTGMNPEVSCTDASGKAAGFGPLKDGFMFETSTGLSRMLLSSPTCPVLEA 183

Query: 56  LGKKLSFEIAVGLNGRVW 3
           LGKKLSFE A GLNGRVW
Sbjct: 184 LGKKLSFETAFGLNGRVW 201


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
           [Glycine max] gi|571439680|ref|XP_006574927.1|
           PREDICTED: putative exosome complex component rrp40-like
           isoform X2 [Glycine max]
          Length = 240

 Score =  321 bits (822), Expect = 1e-85
 Identities = 158/201 (78%), Positives = 178/201 (88%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           ++ K SSS  + +DQ+V PGDV+LDLS M NQTIKLG GLRQD DAI+V+KAG+LRFSKP
Sbjct: 1   METKSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           NKYWVE+S KRYVP   D+VLGIV+DS+++NFLVDIKG  LA LPVLAFEGGTRRNIP+F
Sbjct: 61  NKYWVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           E GTL+YARVVKAN GMNPEL+CTDASGKAAEFG LKDG MFE +TGLSRMLLSSPTCP 
Sbjct: 121 EIGTLIYARVVKANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPV 180

Query: 65  LEALGKKLSFEIAVGLNGRVW 3
           L+ALGKKLSFEIAVGLNGRVW
Sbjct: 181 LDALGKKLSFEIAVGLNGRVW 201


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  320 bits (819), Expect = 3e-85
 Identities = 161/199 (80%), Positives = 172/199 (86%)
 Frame = -2

Query: 599 EKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNK 420
           EK SSS ++ +DQ VVPGDVVLDLS M N+TIKLG GLRQD DAI+V K GKLRFSKPNK
Sbjct: 3   EKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPNK 62

Query: 419 YWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEA 240
           YWVESS KRYVPC  D VLGIVLDS+A+NFLVDIKG +LA LPVLAFEGGTRRNIPKFE 
Sbjct: 63  YWVESSQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEM 122

Query: 239 GTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALE 60
           G LLY RVVK N GMNPEL+CTDASGKAA FG LKDG MFE STGLSRMLLSSP+CP LE
Sbjct: 123 GALLYVRVVKVNPGMNPELACTDASGKAAGFGLLKDGYMFECSTGLSRMLLSSPSCPVLE 182

Query: 59  ALGKKLSFEIAVGLNGRVW 3
           +LGKKLSFE AVGLNGRVW
Sbjct: 183 SLGKKLSFETAVGLNGRVW 201


>ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
           gi|548832362|gb|ERM95158.1| hypothetical protein
           AMTR_s00009p00262150 [Amborella trichopoda]
          Length = 240

 Score =  318 bits (816), Expect = 7e-85
 Identities = 157/202 (77%), Positives = 175/202 (86%)
 Frame = -2

Query: 608 MVDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSK 429
           M DE  SS P + +D  V PGDVVLDL+ M NQT+KLG GLRQ+ DAI V KAG+ +FSK
Sbjct: 1   MTDES-SSHPNTLVDHWVAPGDVVLDLTNMANQTLKLGGGLRQECDAIIVTKAGRFKFSK 59

Query: 428 PNKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPK 249
           PNKYWVESS KRYVPCV DTVLGIV+DSKA+NFLVDIKG TL  LPVLAFEGGTRRN+PK
Sbjct: 60  PNKYWVESSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPTLGFLPVLAFEGGTRRNVPK 119

Query: 248 FEAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCP 69
           FE GT+LY RVVKAN+GMNPELSCTDA+GKA+EFG +KDG MFESSTGL+R+LLS PTCP
Sbjct: 120 FEIGTVLYLRVVKANTGMNPELSCTDATGKASEFGPIKDGYMFESSTGLARLLLSRPTCP 179

Query: 68  ALEALGKKLSFEIAVGLNGRVW 3
            L+ALGKKLSFEIAVGLNGRVW
Sbjct: 180 VLDALGKKLSFEIAVGLNGRVW 201


>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
           max] gi|571433381|ref|XP_006572880.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X2 [Glycine
           max] gi|571433383|ref|XP_006572881.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X3 [Glycine
           max] gi|571433385|ref|XP_006572882.1| PREDICTED:
           uncharacterized protein LOC100809941 isoform X4 [Glycine
           max]
          Length = 240

 Score =  318 bits (815), Expect = 9e-85
 Identities = 156/201 (77%), Positives = 179/201 (89%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           ++ K +SS  + +DQ+V PGDVVLDLS+M+NQTIKLG GLRQD DAI+V+KAG+LRFSKP
Sbjct: 1   METKSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCDAISVMKAGRLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           +KYWVE+S KRYVP   D+VLGIV+DS+++NFLVDIKG TLA LPVLAFEGGTRRNIP+F
Sbjct: 61  HKYWVENSQKRYVPYAEDSVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPRF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           E GTL+Y RV+KAN GMNPELSCTDASGKAAEFG LKDG MFE +TG SRMLLSSPTCP 
Sbjct: 121 EIGTLIYVRVIKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGQSRMLLSSPTCPV 180

Query: 65  LEALGKKLSFEIAVGLNGRVW 3
           L+ALGKKLSFEIAVGLNGRVW
Sbjct: 181 LDALGKKLSFEIAVGLNGRVW 201


>ref|XP_004241525.1| PREDICTED: putative exosome complex component rrp40-like [Solanum
           lycopersicum]
          Length = 235

 Score =  317 bits (812), Expect = 2e-84
 Identities = 156/194 (80%), Positives = 170/194 (87%)
 Frame = -2

Query: 584 SPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKYWVES 405
           S   FID+ VVPGDVVLDLS M NQTIKLG GL+QD DA+TVVKAG LRFSKPNKYW+ES
Sbjct: 3   SKPCFIDKPVVPGDVVLDLSSMTNQTIKLGGGLQQDHDAVTVVKAGILRFSKPNKYWIES 62

Query: 404 SHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAGTLLY 225
           SHKRY+P VGD VLGIV+D +A++F VDIKG  +A LPVLAFEGGTRRNIPKFE GTL+Y
Sbjct: 63  SHKRYIPTVGDAVLGIVVDKRADSFYVDIKGPMVAFLPVLAFEGGTRRNIPKFEVGTLIY 122

Query: 224 ARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEALGKK 45
            R+VKAN G+NPELSC DASGKAAEFG LKDG MFESSTGLSRMLLSSPTCP LE LGKK
Sbjct: 123 TRIVKANPGINPELSCMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEGLGKK 182

Query: 44  LSFEIAVGLNGRVW 3
           L+FEIAVGLNGRVW
Sbjct: 183 LAFEIAVGLNGRVW 196


>ref|XP_004298940.1| PREDICTED: putative exosome complex component rrp40-like [Fragaria
           vesca subsp. vesca]
          Length = 241

 Score =  315 bits (807), Expect = 8e-84
 Identities = 155/194 (79%), Positives = 171/194 (88%)
 Frame = -2

Query: 584 SPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKYWVES 405
           +PA+F+DQ+VVPGDVVLDL+ M NQTIKLG GLRQD DAI  +KAG LRFSKPNKYWVE+
Sbjct: 5   APANFVDQSVVPGDVVLDLTNMANQTIKLGGGLRQDCDAIAAMKAGTLRFSKPNKYWVET 64

Query: 404 SHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAGTLLY 225
           S KRYVPCV D+VLGI++DSKA+NFLVDIKG +LA LPVLAFEGGTRRNIPKFE GTLLY
Sbjct: 65  SQKRYVPCVEDSVLGIMVDSKADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEVGTLLY 124

Query: 224 ARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEALGKK 45
            RVVKAN GMNPELSC DA GKAAE+G LKDG MFE STGLSRMLLSSPT P L ALGK 
Sbjct: 125 VRVVKANPGMNPELSCMDAGGKAAEYGPLKDGYMFECSTGLSRMLLSSPTRPVLAALGKN 184

Query: 44  LSFEIAVGLNGRVW 3
           +SFEIA+G+NGRVW
Sbjct: 185 ISFEIAIGVNGRVW 198


>ref|XP_006347458.1| PREDICTED: putative exosome complex component rrp40-like [Solanum
           tuberosum]
          Length = 235

 Score =  313 bits (803), Expect = 2e-83
 Identities = 154/194 (79%), Positives = 169/194 (87%)
 Frame = -2

Query: 584 SPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKYWVES 405
           S   FID+ VVPGDVVLDLS M NQTIKLG GL+QD DA+TVVKAG LRFSKP+KYW+ES
Sbjct: 3   SKPCFIDKLVVPGDVVLDLSSMTNQTIKLGGGLQQDHDAVTVVKAGILRFSKPSKYWIES 62

Query: 404 SHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAGTLLY 225
           SHKRY+P VGD VLGIV+D +A++F VDIKG  +A LPVLAFEGG RRNIPKFE GTL+Y
Sbjct: 63  SHKRYIPTVGDAVLGIVVDKRADSFYVDIKGPMMAFLPVLAFEGGNRRNIPKFEVGTLIY 122

Query: 224 ARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEALGKK 45
            R+VKAN G+NPELSC DASGKAAEFG LKDG MFESSTGLSRMLLSSPTCP LE LGKK
Sbjct: 123 TRIVKANPGINPELSCMDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEGLGKK 182

Query: 44  LSFEIAVGLNGRVW 3
           L+FEIAVGLNGRVW
Sbjct: 183 LAFEIAVGLNGRVW 196


>ref|XP_007036205.1| PNAS-3 related isoform 3 [Theobroma cacao]
           gi|508773450|gb|EOY20706.1| PNAS-3 related isoform 3
           [Theobroma cacao]
          Length = 230

 Score =  313 bits (803), Expect = 2e-83
 Identities = 158/192 (82%), Positives = 168/192 (87%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           +++K S SP S ID TVVPGDVVLDLS M NQTI LG GLRQD DAI+V+KAG LRFSKP
Sbjct: 1   MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           NKYWVESS KRY PCV DTVLGIV+DSKA+NFL+DIKG  LA LPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVESSQKRYTPCVEDTVLGIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           E GTLLY RVVKAN GMNPELSCTDASGKAAEFG LKDG MFE+STGLSR LLSSPTCP 
Sbjct: 121 EVGTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPV 180

Query: 65  LEALGKKLSFEI 30
           LEALGKKLSFE+
Sbjct: 181 LEALGKKLSFEV 192


>ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arabidopsis lyrata subsp.
           lyrata] gi|297315127|gb|EFH45550.1| hypothetical protein
           ARALYDRAFT_491516 [Arabidopsis lyrata subsp. lyrata]
          Length = 241

 Score =  312 bits (799), Expect = 7e-83
 Identities = 157/198 (79%), Positives = 169/198 (85%)
 Frame = -2

Query: 596 KLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNKY 417
           K+S SP S IDQ VVPGDVVLDLS M NQTIKLG GL QD D I+ ++AGKL F KPNKY
Sbjct: 4   KVSVSPTSLIDQIVVPGDVVLDLSNMTNQTIKLGSGLHQDNDVISAMRAGKLSFCKPNKY 63

Query: 416 WVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEAG 237
           WVESSHKRY+P   D VLGIV+DSK +NF VDIKG  LALLPVLAFEGGT+RNIPKFE G
Sbjct: 64  WVESSHKRYIPRPEDHVLGIVVDSKTDNFWVDIKGPQLALLPVLAFEGGTQRNIPKFEVG 123

Query: 236 TLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALEA 57
           TLLY RVVK N+GMNPELSCTDASGKAA FG L+DG M E+STGLSRMLLSSPTCP +EA
Sbjct: 124 TLLYLRVVKTNTGMNPELSCTDASGKAALFGPLRDGFMLETSTGLSRMLLSSPTCPVIEA 183

Query: 56  LGKKLSFEIAVGLNGRVW 3
           LGKKLSFEIAVGLNGRVW
Sbjct: 184 LGKKLSFEIAVGLNGRVW 201


>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
           gi|217074508|gb|ACJ85614.1| unknown [Medicago
           truncatula] gi|355515294|gb|AES96917.1| Exosome complex
           exonuclease RRP40 [Medicago truncatula]
           gi|388510130|gb|AFK43131.1| unknown [Medicago
           truncatula]
          Length = 240

 Score =  312 bits (799), Expect = 7e-83
 Identities = 154/201 (76%), Positives = 172/201 (85%)
 Frame = -2

Query: 605 VDEKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKP 426
           ++ K + S  +F+DQ V PGDVVLDLS M NQTIKLG GLRQD D I+V+KAG+LRFSKP
Sbjct: 1   MESKSAGSSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDVISVMKAGRLRFSKP 60

Query: 425 NKYWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKF 246
           NKYWVESS KRYVP   D+VLGI++DS+++NFLVDIKG TLA LPVLAFEGGTRRNIPKF
Sbjct: 61  NKYWVESSQKRYVPHAEDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKF 120

Query: 245 EAGTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPA 66
           E G L+Y RVVKA  GMNPELSCTDASGKA EFG LK+G MFE STGLSRMLLS+PTCP 
Sbjct: 121 EVGALIYVRVVKAIPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSTPTCPV 180

Query: 65  LEALGKKLSFEIAVGLNGRVW 3
           L+ LGKKLSFEIAVGLNGRVW
Sbjct: 181 LDTLGKKLSFEIAVGLNGRVW 201


>gb|EAY76792.1| hypothetical protein OsI_04749 [Oryza sativa Indica Group]
          Length = 239

 Score =  310 bits (795), Expect = 2e-82
 Identities = 154/199 (77%), Positives = 169/199 (84%)
 Frame = -2

Query: 599 EKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNK 420
           E     P++ +D  VVPGDVVLDL+ M NQTIKLG GLRQD D I    AG+LR SKPNK
Sbjct: 2   ESRKPPPSALVDNHVVPGDVVLDLTEMTNQTIKLGAGLRQDCDTIQTTSAGRLRLSKPNK 61

Query: 419 YWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEA 240
           YWVESS KRY+P V DTVLG+V+D+K +NFLVDIKG  LA LPVLAFEGGTRRNIPKFE 
Sbjct: 62  YWVESSQKRYIPSVEDTVLGVVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEI 121

Query: 239 GTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALE 60
           GTL+YARVVKANS MNPELSC DA+GKAAEFG+LKDG MF++STGLSRMLLSSPTCP LE
Sbjct: 122 GTLIYARVVKANSIMNPELSCMDATGKAAEFGQLKDGYMFDTSTGLSRMLLSSPTCPVLE 181

Query: 59  ALGKKLSFEIAVGLNGRVW 3
           ALGKKLSFEIAVGLNGRVW
Sbjct: 182 ALGKKLSFEIAVGLNGRVW 200


>dbj|BAD87535.1| ALM beta-like [Oryza sativa Japonica Group]
           gi|125572934|gb|EAZ14449.1| hypothetical protein
           OsJ_04370 [Oryza sativa Japonica Group]
           gi|215768884|dbj|BAH01113.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 239

 Score =  310 bits (795), Expect = 2e-82
 Identities = 154/199 (77%), Positives = 169/199 (84%)
 Frame = -2

Query: 599 EKLSSSPASFIDQTVVPGDVVLDLSRMVNQTIKLGDGLRQDFDAITVVKAGKLRFSKPNK 420
           E     P++ +D  VVPGDVVLDL+ M NQTIKLG GLRQD D I    AG+LR SKPNK
Sbjct: 2   ESRKPPPSALVDNHVVPGDVVLDLTEMTNQTIKLGAGLRQDCDTIQATSAGRLRLSKPNK 61

Query: 419 YWVESSHKRYVPCVGDTVLGIVLDSKAENFLVDIKGSTLALLPVLAFEGGTRRNIPKFEA 240
           YWVESS KRY+P V DTVLG+V+D+K +NFLVDIKG  LA LPVLAFEGGTRRNIPKFE 
Sbjct: 62  YWVESSQKRYIPSVEDTVLGVVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEI 121

Query: 239 GTLLYARVVKANSGMNPELSCTDASGKAAEFGRLKDGCMFESSTGLSRMLLSSPTCPALE 60
           GTL+YARVVKANS MNPELSC DA+GKAAEFG+LKDG MF++STGLSRMLLSSPTCP LE
Sbjct: 122 GTLIYARVVKANSIMNPELSCMDATGKAAEFGQLKDGYMFDTSTGLSRMLLSSPTCPVLE 181

Query: 59  ALGKKLSFEIAVGLNGRVW 3
           ALGKKLSFEIAVGLNGRVW
Sbjct: 182 ALGKKLSFEIAVGLNGRVW 200