BLASTX nr result
ID: Cocculus22_contig00006845
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00006845 (814 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 347 4e-93 gb|ADD30908.1| putative RF1 protein [Meliosma aff. cuneifolia Mo... 335 1e-89 ref|NP_862813.1| Ycf1 protein [Calycanthus floridus var. glaucus... 330 4e-88 ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 327 2e-87 ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnoli... 321 2e-85 ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop... 321 2e-85 gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ... 321 2e-85 gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 321 2e-85 ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop... 321 2e-85 ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 321 2e-85 ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 321 2e-85 ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) ... 320 4e-85 ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) ... 318 1e-84 ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) ... 318 1e-84 ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) ... 318 1e-84 ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) ... 318 2e-84 ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ... 317 3e-84 ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) ... 317 3e-84 gb|AHH24272.1| hypothetical chloroplast protein ycf1, partial (c... 317 3e-84 ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) ... 317 3e-84 >gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] Length = 1909 Score = 347 bits (889), Expect = 4e-93 Identities = 184/270 (68%), Positives = 207/270 (76%), Gaps = 4/270 (1%) Frame = +1 Query: 16 GQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKRYF 186 GQ D SD QN GNL SD+SNQQKDV+EDY GSD RKKKQSK NT AELD FLKRY Sbjct: 1609 GQRDLGSDTQNHGNLGSDLSNQQKDVEEDYAGSDMKKRRKKKQSKSNTEAELDFFLKRYL 1668 Query: 187 LFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKNLI 366 LFQLRW+DPLN R+INNIKVYCLLLRLINP+EIAISSIQR EMSLD+MLIQK+LTL L+ Sbjct: 1669 LFQLRWNDPLNQRLINNIKVYCLLLRLINPREIAISSIQRREMSLDIMLIQKNLTLTELM 1728 Query: 367 TKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDESLS 546 +GIL+IEPVRLS+K DGQFIMYQTI ISLVHKSKH Q N++ EKR VDKN DES++ Sbjct: 1729 KRGILVIEPVRLSVKSDGQFIMYQTIVISLVHKSKH--QNNQRYREKRYVDKNNFDESIA 1786 Query: 547 RHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEGNF 726 RH+R+ NRD+N+ DLLVPENILSP CFNS N V ++ VF GNN N Sbjct: 1787 RHQRMTRNRDKNHSDLLVPENILSPRRRRELRILICFNSRNRNGVDRNPVFCNGNNIKNC 1846 Query: 727 VPFLDESKRLDIDNT-FSKFKFFIWPNYRL 813 FLDESK LD + T K KFF+WPNYRL Sbjct: 1847 GQFLDESKHLDREKTKLIKVKFFLWPNYRL 1876 >gb|ADD30908.1| putative RF1 protein [Meliosma aff. cuneifolia Moore 333] Length = 1894 Score = 335 bits (859), Expect = 1e-89 Identities = 183/280 (65%), Positives = 204/280 (72%), Gaps = 14/280 (5%) Frame = +1 Query: 16 GQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDTRK---KKQSKRNTAAELDLFLKRYF 186 G+ D SD QNQGN S +SNQQ D +EDY GSD +K KK+ K NT AEL+ FLKRYF Sbjct: 1584 GKGDLGSDVQNQGNFESILSNQQTDGQEDYAGSDIQKDMKKKEFKNNTKAELNFFLKRYF 1643 Query: 187 LFQLRWDDPLNP---RIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLK 357 LFQLRW DPLN RIINNIKVYC LLRLINPKEIAISSIQR EM LDVML QKDL+LK Sbjct: 1644 LFQLRWGDPLNSLNQRIINNIKVYCFLLRLINPKEIAISSIQRGEMDLDVMLSQKDLSLK 1703 Query: 358 NLITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDE 537 L+ KGI +IEP+RLSIKWDGQFIMY+TI ISLVHKSKH QT+RKC +KRNVDKN DE Sbjct: 1704 ELLKKGIFLIEPIRLSIKWDGQFIMYKTIGISLVHKSKH--QTSRKCRDKRNVDKNHFDE 1761 Query: 538 SL-----SRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFR 702 S+ +RHERV+G RDEN+YDLLVPENILS CFNS + NVV ++ VF Sbjct: 1762 SITRHESARHERVVGTRDENHYDLLVPENILSSRCRRELRILICFNSGQGNVVNRNSVFC 1821 Query: 703 TGNNEGNFVPFLDESKRLDIDN---TFSKFKFFIWPNYRL 813 GNN N FLDE K D KFKFF+WPNYRL Sbjct: 1822 NGNNVRNCGQFLDEDKHFATDTIKFINMKFKFFLWPNYRL 1861 >ref|NP_862813.1| Ycf1 protein [Calycanthus floridus var. glaucus] gi|75146316|sp|Q7YJS6.1|YCF1_CALFG RecName: Full=Putative membrane protein ycf1 gi|32399439|emb|CAD28780.1| Ycf1 protein [Calycanthus floridus var. glaucus] Length = 1828 Score = 330 bits (846), Expect = 4e-88 Identities = 175/272 (64%), Positives = 202/272 (74%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDTRK---KKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD NQQKDV++DY SD +K K+QSK N AEL FLKR Sbjct: 1525 LENRNQEEKEEFGQGNLGSDTQNQQKDVEKDYAKSDIKKRGKKRQSKSNKGAELQFFLKR 1584 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R++NN+KVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1585 YLLFQLRWDDPLNQRMMNNVKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1644 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQFIMYQTI ISLVHK+KH QTNR+ EKR VD+N D S Sbjct: 1645 LIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKH--QTNRRYREKRYVDENYFDGS 1702 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +++ NR EN YDLLVPENILSP FNS NVV ++LVF GNN Sbjct: 1703 IAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVK 1762 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 NF FLDE K +D D N F +FK F+WPNYRL Sbjct: 1763 NFGQFLDEDKHIDTDINKFIQFKLFLWPNYRL 1794 >ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron aralioides] gi|290489080|gb|ADD30924.1| putative RF1 protein [Trochodendron aralioides] gi|479279354|gb|AGJ72207.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron aralioides] Length = 1896 Score = 327 bits (839), Expect = 2e-87 Identities = 178/270 (65%), Positives = 199/270 (73%), Gaps = 4/270 (1%) Frame = +1 Query: 16 GQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKRYF 186 GQ D DAQNQ L S +SNQQKDV+E Y SD RKKKQ K NT AELD FLK+Y Sbjct: 1596 GQGDLRLDAQNQRKLRSLLSNQQKDVEEYYAESDIKKRRKKKQYKSNTEAELDFFLKKYL 1655 Query: 187 LFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKNLI 366 LFQLRW++PLN +I NIKVYCLLLRLINPKEIA+SSIQ EMSLDV+ +QKD TL LI Sbjct: 1656 LFQLRWNNPLNQKIFQNIKVYCLLLRLINPKEIALSSIQNGEMSLDVIQMQKDKTLTELI 1715 Query: 367 TKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDESLS 546 KGILIIEPVRLSIK DGQFIMYQTI ISLVHKSKH +TNR+ EK VDKN DES + Sbjct: 1716 RKGILIIEPVRLSIKQDGQFIMYQTIGISLVHKSKH--KTNRRYREKGYVDKNNFDESTA 1773 Query: 547 RHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEGNF 726 RHER++GN DEN+YDLLVPENI SP CFNS N+V ++ VF G N N Sbjct: 1774 RHERMVGNGDENHYDLLVPENISSPRRRRELRILICFNSGNRNIVDRNPVFCNGTNVKNC 1833 Query: 727 VPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 F+DE+K LDID N F K KFF+WPNYRL Sbjct: 1834 SQFVDENKHLDIDTNKFIKLKFFLWPNYRL 1863 >ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnolia tripetala] gi|608608461|gb|AHW52015.1| photosystem I assembly protein Ycf1 [Magnolia tripetala] Length = 1846 Score = 321 bits (823), Expect = 2e-85 Identities = 172/272 (63%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1544 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1603 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1604 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1663 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1664 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1721 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1722 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1781 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1782 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1813 >ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia grandiflora] gi|372862899|gb|AEX98975.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia grandiflora] Length = 1843 Score = 321 bits (823), Expect = 2e-85 Identities = 172/272 (63%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1541 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1600 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1601 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1660 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1661 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1718 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1719 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1778 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1779 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1810 >gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1863 Score = 321 bits (823), Expect = 2e-85 Identities = 172/272 (63%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1561 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1620 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1621 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1680 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1681 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1738 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1739 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1798 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1799 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1830 >gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1863 Score = 321 bits (823), Expect = 2e-85 Identities = 172/272 (63%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1561 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1620 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1621 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1680 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1681 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1738 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1739 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1798 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1799 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1830 >ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862561|gb|AEX98641.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1863 Score = 321 bits (823), Expect = 2e-85 Identities = 172/272 (63%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1561 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1620 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1621 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1680 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1681 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1738 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1739 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1798 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1799 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1830 >ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis] gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis] Length = 1863 Score = 321 bits (823), Expect = 2e-85 Identities = 172/272 (63%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1561 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1620 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1621 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1680 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1681 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1738 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1739 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1798 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1799 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1830 >ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera] gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName: Full=Putative membrane protein ycf1; Short=RF1 gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1 [Liriodendron tulipifera] Length = 1835 Score = 321 bits (823), Expect = 2e-85 Identities = 173/272 (63%), Positives = 199/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++DY SD RKK+QSK N AEL+ FLKR Sbjct: 1533 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDYAESDIKKRRKKRQSKSNKEAELNFFLKR 1592 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINPKEIAISSIQR EM LDVMLIQKDLTL Sbjct: 1593 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPKEIAISSIQRGEMRLDVMLIQKDLTLTE 1652 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI ISLVHK+K+ QTNR C EK+ VD+N D S Sbjct: 1653 LIKRGILIIEPVRLSIKWDGQWIMYQTIGISLVHKNKY--QTNRICREKKYVDENSFDRS 1710 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1711 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENGNVVDRNSVFFNGNNVR 1770 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+ PNYRL Sbjct: 1771 NCVQFLDEDKHFDTDINKFIQFKLFLCPNYRL 1802 >ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia dealbata] Length = 1846 Score = 320 bits (820), Expect = 4e-85 Identities = 171/272 (62%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N++KD+++D SD RKK+QSK N AELD FLKR Sbjct: 1544 LENRNQEEKEQLGQGNLGSDPRNREKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1603 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1604 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1663 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1664 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1721 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1722 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1781 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1782 NCVQFLDEDKHFDTDINKFLQFKLFLWPNYRL 1813 >ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sinica] Length = 1841 Score = 318 bits (816), Expect = 1e-84 Identities = 172/272 (63%), Positives = 199/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1539 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKGAELDFFLKR 1598 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN RI+NNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1599 YLLFQLRWDDPLNQRILNNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1658 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI KGILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR EK+ VD++ D S Sbjct: 1659 LIKKGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRIRREKKYVDEDYFDRS 1716 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1717 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1776 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1777 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1808 >ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia odora] Length = 1852 Score = 318 bits (816), Expect = 1e-84 Identities = 171/272 (62%), Positives = 199/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1550 LENRNQEEKEELGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1609 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRW DPLN RI+NNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1610 YLLFQLRWADPLNQRILNNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1669 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1670 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1727 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1728 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1787 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1788 NCVQFLDEDKHFDTDINEFIQFKLFLWPNYRL 1819 >ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia cathcartii] Length = 1837 Score = 318 bits (816), Expect = 1e-84 Identities = 171/259 (66%), Positives = 194/259 (74%), Gaps = 4/259 (1%) Frame = +1 Query: 49 QGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKRYFLFQLRWDDPLN 219 QGNL SD N+QKD+++D SD RKKKQSK N AELD FLKRY LFQLRW DPLN Sbjct: 1548 QGNLGSDPRNRQKDLEKDSAESDIKKRRKKKQSKSNKEAELDFFLKRYLLFQLRWADPLN 1607 Query: 220 PRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKNLITKGILIIEPVR 399 RI+NNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL LI +GILIIEPVR Sbjct: 1608 QRILNNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVR 1667 Query: 400 LSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDESLSRHERVIGNRDE 579 LSIKWDGQ+IMYQ I+ISLVHK+K+ QTNR C EK+ VD++ D S+++H +V+ NRDE Sbjct: 1668 LSIKWDGQWIMYQNISISLVHKNKY--QTNRICREKKYVDEDYFDRSIAQHGKVLVNRDE 1725 Query: 580 NYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEGNFVPFLDESKRLD 759 N Y LLVPENI SP C NSE NVV ++ VF GNN N V FLDE K D Sbjct: 1726 NNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVRNCVQFLDEDKHFD 1785 Query: 760 ID-NTFSKFKFFIWPNYRL 813 D N F +FK F+WPNYRL Sbjct: 1786 TDINEFIQFKLFLWPNYRL 1804 >ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia pyramidata] Length = 1858 Score = 318 bits (814), Expect = 2e-84 Identities = 170/272 (62%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + +GNL SD N+QKD+++D SD RKK+QSK N AELD FLKR Sbjct: 1556 LENRNQEEKEQLGKGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQSKSNKEAELDFFLKR 1615 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1616 YLLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1675 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QTNR C EK+ VD++ D S Sbjct: 1676 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTNRICREKKYVDEDYFDRS 1733 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1734 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1793 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FL+E K D D N F +FK F+WPNYRL Sbjct: 1794 NCVQFLNEDKHFDTDINKFIQFKLFLWPNYRL 1825 >ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia] Length = 1858 Score = 317 bits (813), Expect = 3e-84 Identities = 170/272 (62%), Positives = 199/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+Q K N AELD FLKR Sbjct: 1556 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQFKSNKEAELDFFLKR 1615 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN RI+NNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1616 YLLFQLRWDDPLNQRILNNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1675 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QT+R C EK+ VD++ D S Sbjct: 1676 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTHRICREKKYVDEDYFDRS 1733 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1734 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1793 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1794 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1825 >ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sprengeri] Length = 1846 Score = 317 bits (813), Expect = 3e-84 Identities = 170/272 (62%), Positives = 199/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + QGNL SD N+QKD+++D SD RKK+Q K N AELD FLKR Sbjct: 1544 LENRNQEEKEQLGQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQFKSNKEAELDFFLKR 1603 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN RI+NNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1604 YLLFQLRWDDPLNQRILNNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1663 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QT+R C EK+ VD++ D S Sbjct: 1664 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTHRICREKKYVDEDYFDRS 1721 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1722 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1781 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1782 NCVQFLDEDKHFDTDINKFIQFKLFLWPNYRL 1813 >gb|AHH24272.1| hypothetical chloroplast protein ycf1, partial (chloroplast) [Japonolirion osense] Length = 1537 Score = 317 bits (812), Expect = 3e-84 Identities = 177/273 (64%), Positives = 196/273 (71%), Gaps = 6/273 (2%) Frame = +1 Query: 13 QGQVDRESDAQNQGNLASDI--SNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLK 177 QGQ D SD QNQGN SD+ N++KDV+EDY G D RKKKQSK N AELD FL+ Sbjct: 1234 QGQGDLVSDKQNQGNRGSDLRKQNKKKDVEEDYAGPDIKKRRKKKQSKSNKEAELDFFLR 1293 Query: 178 RYFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLK 357 +YFLFQLRWDDPLN R+INNIKVYCLLLRLINP+EIAISSIQR EM LDVMLI KDL L Sbjct: 1294 KYFLFQLRWDDPLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLALT 1353 Query: 358 NLITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDE 537 LI KGILIIEPVRLSIK DGQFI+YQTI ISLV KSKH QTNRK +KR VD+ D Sbjct: 1354 ELIKKGILIIEPVRLSIKKDGQFIIYQTIGISLVDKSKH--QTNRKYIKKRYVDEKNFDR 1411 Query: 538 SLSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNE 717 S+ RH ++ N D+NYYD LVPENILSP FNS NVV K+ VF NN Sbjct: 1412 SIPRHSSMLVNGDKNYYDFLVPENILSPRRRRELRILISFNSWNWNVVDKNPVFFNENNI 1471 Query: 718 GNFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N F +E K L+ D N F KFK F+WPNYRL Sbjct: 1472 RNCGQFWNEDKHLNTDANKFIKFKLFLWPNYRL 1504 >ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia liliifera] Length = 1852 Score = 317 bits (812), Expect = 3e-84 Identities = 170/272 (62%), Positives = 200/272 (73%), Gaps = 4/272 (1%) Frame = +1 Query: 10 VQGQVDRESDAQNQGNLASDISNQQKDVKEDYEGSDT---RKKKQSKRNTAAELDLFLKR 180 ++ + E + +QGNL SD N+QKD+++D SD RKK+Q K N AELD FLKR Sbjct: 1550 LENRNQEEKEQLSQGNLGSDPRNRQKDLEKDSAESDIKKRRKKRQFKSNKEAELDFFLKR 1609 Query: 181 YFLFQLRWDDPLNPRIINNIKVYCLLLRLINPKEIAISSIQREEMSLDVMLIQKDLTLKN 360 Y LFQLRWDDPLN RI+NNIKVYCLLLRLINP+EIAISSIQR EM LDVMLIQKDLTL Sbjct: 1610 YLLFQLRWDDPLNQRILNNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTE 1669 Query: 361 LITKGILIIEPVRLSIKWDGQFIMYQTIAISLVHKSKHQIQTNRKCGEKRNVDKNGLDES 540 LI +GILIIEPVRLSIKWDGQ+IMYQTI+ISLVHK+K+ QT+R C EK+ VD++ D S Sbjct: 1670 LIKRGILIIEPVRLSIKWDGQWIMYQTISISLVHKNKY--QTHRICREKKYVDEDYFDRS 1727 Query: 541 LSRHERVIGNRDENYYDLLVPENILSPXXXXXXXXXXCFNSEKVNVVVKDLVFRTGNNEG 720 +++H +V+ N DEN Y LLVPENI SP C NSE NVV ++ VF GNN Sbjct: 1728 IAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENENVVNRNSVFFNGNNVR 1787 Query: 721 NFVPFLDESKRLDID-NTFSKFKFFIWPNYRL 813 N V FLDE K D D N F +FK F+WPNYRL Sbjct: 1788 NCVQFLDEDKHFDTDINKFIQFKSFLWPNYRL 1819