BLASTX nr result
ID: Cocculus22_contig00006815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00006815
(1059 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A... 138 4e-30
ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocar... 129 3e-27
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 127 8e-27
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852... 114 9e-23
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 114 9e-23
emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera] 114 9e-23
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 109 2e-21
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 99 3e-18
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 93 2e-16
gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus... 92 5e-16
gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus... 92 5e-16
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 92 5e-16
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 87 9e-15
ref|XP_003598033.1| B3 domain-containing protein [Medicago trunc... 85 4e-14
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ... 85 6e-14
gb|EMS47492.1| Regulator of nonsense transcripts 3A [Triticum ur... 84 1e-13
ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296... 83 2e-13
ref|XP_004499561.1| PREDICTED: regulator of nonsense transcripts... 83 2e-13
ref|XP_004499560.1| PREDICTED: regulator of nonsense transcripts... 83 2e-13
ref|XP_004499559.1| PREDICTED: regulator of nonsense transcripts... 83 2e-13
>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
gi|548862693|gb|ERN20051.1| hypothetical protein
AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 138 bits (347), Expect = 4e-30
Identities = 108/301 (35%), Positives = 154/301 (51%), Gaps = 7/301 (2%)
Frame = -1
Query: 984 ASRVVSQQQTETSPTKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXXXQ- 811
AS V QQQT +SP +N S + +Q+R+ ++RM++SILSNK+ R Q
Sbjct: 296 ASGSVVQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQ 355
Query: 810 IESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHIS 634
++ LE DKR R + R S+DH D K+ GN + +
Sbjct: 356 LQGLSLEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPAN 415
Query: 633 EKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVAS 454
EK+EKRTRNKDRPDR WTPLRRS+G+H DE LE+ + AQ +
Sbjct: 416 EKQEKRTRNKDRPDRAVWTPLRRSDGIHTVDE---------SQMTSDSLEKLSNAQELKL 466
Query: 453 SGVDVIEDMD--SSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVP 280
D E+ D S S +G K + D+ + ++ GRG S S+ + L+ + K D
Sbjct: 467 G--DDTEECDGLGSNASSSMG-KSRTSDLGYHNSRSGRGASS-SSSEHSLNQGDTKFDTS 522
Query: 279 NANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGATS 106
+A+R ++K+ G+ R++ S+ENG RH RR S G KD D M +GK KRGG S
Sbjct: 523 SASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLPDGKPVKRGGIPS 582
Query: 105 H 103
+
Sbjct: 583 Y 583
>ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa]
gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
[Populus trichocarpa]
Length = 527
Score = 129 bits (323), Expect = 3e-27
Identities = 110/308 (35%), Positives = 147/308 (47%), Gaps = 6/308 (1%)
Frame = -1
Query: 1002 EQGTTVASRVVSQQQTETSPTKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXX 823
E+ ++ + +SQQQ+ +S +N ST+ +Q+RE S RMIRSIL NK++R
Sbjct: 280 EKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVH 339
Query: 822 XXXQIESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTA 646
Q+++S+LE +KR R A+ +D DDKVVGN H
Sbjct: 340 SEPQMQTSNLEKEKRPPRPPHAQLGLKD---------------ANGTPDDKVVGNDLH-- 382
Query: 645 GHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQ 466
G +EK+EKRTRNKDRPDRG WTPLRRS+G +ASDE L
Sbjct: 383 GFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL---------------------- 420
Query: 465 AVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVD 286
+ ST+ F + + D VKVD
Sbjct: 421 ---------LSSASQSTQSVFDSSQGNHGD--------------------------VKVD 445
Query: 285 VPNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGA 112
N R G++K GS R N SS++NG +HF RRGPSH +D D V E K+ KRGG+
Sbjct: 446 SLNL-RSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTV--EAKTPKRGGS 502
Query: 111 T---SHEV 97
+ SHEV
Sbjct: 503 SGYGSHEV 510
>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
gi|550341819|gb|ERP62848.1| hypothetical protein
POPTR_0004s23450g [Populus trichocarpa]
Length = 520
Score = 127 bits (319), Expect = 8e-27
Identities = 109/307 (35%), Positives = 146/307 (47%), Gaps = 6/307 (1%)
Frame = -1
Query: 1002 EQGTTVASRVVSQQQTETSPTKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXX 823
E+ ++ + +SQQQ+ +S +N ST+ +Q+RE S RMIRSIL NK++R
Sbjct: 280 EKEISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVH 339
Query: 822 XXXQIESSDLE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTA 646
Q+++S+LE +KR R A+ +D DDKVVGN H
Sbjct: 340 SEPQMQTSNLEKEKRPPRPPHAQLGLKD---------------ANGTPDDKVVGNDLH-- 382
Query: 645 GHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQ 466
G +EK+EKRTRNKDRPDRG WTPLRRS+G +ASDE L
Sbjct: 383 GFPNEKQEKRTRNKDRPDRGVWTPLRRSDGSYASDESL---------------------- 420
Query: 465 AVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVD 286
+ ST+ F + + D VKVD
Sbjct: 421 ---------LSSASQSTQSVFDSSQGNHGD--------------------------VKVD 445
Query: 285 VPNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGA 112
N R G++K GS R N SS++NG +HF RRGPSH +D D V E K+ KRGG+
Sbjct: 446 SLNL-RSGEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTV--EAKTPKRGGS 502
Query: 111 T---SHE 100
+ SHE
Sbjct: 503 SGYGSHE 509
>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
Length = 322
Score = 114 bits (284), Expect = 9e-23
Identities = 99/295 (33%), Positives = 129/295 (43%), Gaps = 7/295 (2%)
Frame = -1
Query: 963 QQTETSPTKNF-PVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLE- 790
QQ TSP KN + K NQ+RE S R+IRSIL NK+AR Q ++S+LE
Sbjct: 79 QQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEK 138
Query: 789 DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTR 610
+KR R + S++ DDKVVGN H+ +SEK++KRTR
Sbjct: 139 EKRPPRPPHIQLASKE---------------TNGAQDDKVVGNDVHS--FVSEKQDKRTR 181
Query: 609 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIED 430
NKDRPDRG WTPLRRS+G HASDE L
Sbjct: 182 NKDRPDRGVWTPLRRSDGSHASDESL---------------------------------- 207
Query: 429 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 250
S+++P+ +H + R G +V + RGG
Sbjct: 208 SSSASQPTSSDFPEGSHGEMRSDMSNARSG---------------EVKALGSGRGGH--- 249
Query: 249 HGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHE 100
S+++NG RRGP+H KD D + +EGK SKRG A SHE
Sbjct: 250 --------SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 296
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 114 bits (284), Expect = 9e-23
Identities = 99/295 (33%), Positives = 129/295 (43%), Gaps = 7/295 (2%)
Frame = -1
Query: 963 QQTETSPTKNF-PVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLE- 790
QQ TSP KN + K NQ+RE S R+IRSIL NK+AR Q ++S+LE
Sbjct: 290 QQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEK 349
Query: 789 DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTR 610
+KR R + S++ DDKVVGN H+ +SEK++KRTR
Sbjct: 350 EKRPPRPPHIQLASKE---------------TNGAQDDKVVGNDVHS--FVSEKQDKRTR 392
Query: 609 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIED 430
NKDRPDRG WTPLRRS+G HASDE L
Sbjct: 393 NKDRPDRGVWTPLRRSDGSHASDESL---------------------------------- 418
Query: 429 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 250
S+++P+ +H + R G +V + RGG
Sbjct: 419 SSSASQPTSSDFPEGSHGEMRSDMSNARSG---------------EVKALGSGRGGH--- 460
Query: 249 HGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHE 100
S+++NG RRGP+H KD D + +EGK SKRG A SHE
Sbjct: 461 --------SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 507
>emb|CAN60293.1| hypothetical protein VITISV_023400 [Vitis vinifera]
Length = 304
Score = 114 bits (284), Expect = 9e-23
Identities = 99/295 (33%), Positives = 129/295 (43%), Gaps = 7/295 (2%)
Frame = -1
Query: 963 QQTETSPTKNF-PVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLE- 790
QQ TSP KN + K NQ+RE S R+IRSIL NK+AR Q ++S+LE
Sbjct: 35 QQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQASNLEK 94
Query: 789 DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTR 610
+KR R + S++ DDKVVGN H+ +SEK++KRTR
Sbjct: 95 EKRPPRPPHIQLASKE---------------TNGAQDDKVVGNDVHS--FVSEKQDKRTR 137
Query: 609 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIED 430
NKDRPDRG WTPLRRS+G HASDE L
Sbjct: 138 NKDRPDRGVWTPLRRSDGSHASDESL---------------------------------- 163
Query: 429 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 250
S+++P+ +H + R G +V + RGG
Sbjct: 164 SSSASQPTSSDFPEGSHGEMRSDMSNARSG---------------EVKALGSGRGGH--- 205
Query: 249 HGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHE 100
S+++NG RRGP+H KD D + +EGK SKRG A SHE
Sbjct: 206 --------SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 252
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 109 bits (273), Expect = 2e-21
Identities = 102/297 (34%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Frame = -1
Query: 972 VSQQQTETSPTKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDL 793
+S QQ+ + +N ST+ +Q+ E+S R+I+SIL NK++R Q+++S+L
Sbjct: 282 ISLQQSISPSDRNIISSTALKSQRHESSGRVIKSILLNKDSRRIQSSGVQSEPQMQTSNL 341
Query: 792 E-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKR 616
E DKR R A + + DDKVVGN H G +EK+E+R
Sbjct: 342 EKDKRPPRPPHALVLKDAN----------------GTPDDKVVGNDLH--GFPNEKQERR 383
Query: 615 TRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVI 436
TRNKDRPDR WT LRRSEG +ASDE L + A SG D
Sbjct: 384 TRNKDRPDRVVWT-LRRSEGSYASDESL-----------------SSSAYLSTQSGFD-- 423
Query: 435 EDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQI 256
+Q+ G +VK D N R G++
Sbjct: 424 ------------------------SSQVNHG--------------DVKADTLNL-RSGEV 444
Query: 255 KSHGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRGGAT---SHE 100
K+ GS R+N SS++NG RRGP H +D D V EGKS KRGGA+ SHE
Sbjct: 445 KALGSGRSNHSSLDNGSHKHSGRRGPPHPVRDADGSTV--EGKSLKRGGASGYGSHE 499
>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
gi|223534215|gb|EEF35930.1| conserved hypothetical
protein [Ricinus communis]
Length = 472
Score = 99.0 bits (245), Expect = 3e-18
Identities = 90/248 (36%), Positives = 115/248 (46%), Gaps = 7/248 (2%)
Frame = -1
Query: 963 QQTETSPTKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLE-D 787
+Q S KN S K +Q+RE+S R+IRSIL NK++R QI+SS+LE +
Sbjct: 243 KQNAASFDKNVTSSAIKQSQRRESSGRIIRSILLNKDSRQNQSSGFQSEQQIQSSNLEKE 302
Query: 786 KRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTRN 607
KR R + + +D DDK VGN H G EK+EKRTRN
Sbjct: 303 KRLPRPAHVQLVLKD---------------VNGSSDDKFVGNDLH--GFSGEKQEKRTRN 345
Query: 606 KDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIEDM 427
KDRPDR WTPLRRS+G +ASDE L + T +S G +
Sbjct: 346 KDRPDRVVWTPLRRSDGSYASDESL-----------SSSASQSTHTGQDSSQGNLGDIKV 394
Query: 426 DSSTKPS----FIGEKPQNHDIALNGT--QIGRGGMSLSTYDAPLSHLEVKVDVPNANRG 265
DSS S +G +H NG+ GR G S + DA S LE K + RG
Sbjct: 395 DSSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSSLEGK----PSKRG 450
Query: 264 GQIKSHGS 241
G +GS
Sbjct: 451 GGASGYGS 458
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 93.2 bits (230), Expect = 2e-16
Identities = 101/307 (32%), Positives = 136/307 (44%), Gaps = 6/307 (1%)
Frame = -1
Query: 1002 EQGTTVASRVVSQQQTETSPTKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXX 826
E+ + S VS QQ+ + KN S + K NQ+RE S R+IR IL NK+AR
Sbjct: 280 EREISQVSGSVSHQQSAS--VKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGL 337
Query: 825 XXXXQIESSDLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTA 646
QI + + +DKR R + + +D DDKV+ N H
Sbjct: 338 HSEQQISNLE-KDKRPPRPSHVHLVMKD---------------TNGVSDDKVIVNDLH-- 379
Query: 645 GHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQ 466
SEK+E+RTRNKDRPDR WT LRRS+G + SDE L + A
Sbjct: 380 ---SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDESL-----------------SSSAS 418
Query: 465 AVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVD 286
++ S VD E +G G LS
Sbjct: 419 QLSLSAVDSSEG------------------------NLGDGKFDLSNM------------ 442
Query: 285 VPNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGA 112
R G++K+ G R++ SS++NG RH RRGP+H KD D+ V +EGK +RGGA
Sbjct: 443 -----RSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DSSPVMSEGKPLRRGGA 495
Query: 111 T---SHE 100
+ SHE
Sbjct: 496 SGYGSHE 502
>gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus guttatus]
Length = 521
Score = 91.7 bits (226), Expect = 5e-16
Identities = 85/287 (29%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Frame = -1
Query: 960 QTETSPTKNFPVS-TSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLEDK 784
Q +P+K +S +SK N +R+AS R+IRSIL N++ + L+DK
Sbjct: 294 QNAETPSKTSHISASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSELRVQNPLQDK 353
Query: 783 --RTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTR 610
R R + + + +D + K+V N + +EK+E+RT+
Sbjct: 354 DKRPPRPPSMQLLQKD---------------TNGASEGKIVHNDLYAVP--TEKQERRTK 396
Query: 609 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIED 430
NKDRPDRG W PLRRS+G HASD+ L +SSG +
Sbjct: 397 NKDRPDRGVWAPLRRSDGSHASDDSL------------------------SSSGSQTSQV 432
Query: 429 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 250
+D + GT++ R K D+P A RGG +S
Sbjct: 433 VDPA-----------------EGTRVER-----------------KHDMPVA-RGGDYRS 457
Query: 249 HGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRGGAT 109
GS R N S +NG RRG ++ KD D + EGK K+ GA+
Sbjct: 458 TGSGRGNNYSADNGSYRGRRGSAYIVKDADGYST-VEGKPLKKVGAS 503
>gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus guttatus]
Length = 522
Score = 91.7 bits (226), Expect = 5e-16
Identities = 85/287 (29%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Frame = -1
Query: 960 QTETSPTKNFPVS-TSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLEDK 784
Q +P+K +S +SK N +R+AS R+IRSIL N++ + L+DK
Sbjct: 295 QNAETPSKTSHISASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSELRVQNPLQDK 354
Query: 783 --RTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTR 610
R R + + + +D + K+V N + +EK+E+RT+
Sbjct: 355 DKRPPRPPSMQLLQKD---------------TNGASEGKIVHNDLYAVP--TEKQERRTK 397
Query: 609 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIED 430
NKDRPDRG W PLRRS+G HASD+ L +SSG +
Sbjct: 398 NKDRPDRGVWAPLRRSDGSHASDDSL------------------------SSSGSQTSQV 433
Query: 429 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQIKS 250
+D + GT++ R K D+P A RGG +S
Sbjct: 434 VDPA-----------------EGTRVER-----------------KHDMPVA-RGGDYRS 458
Query: 249 HGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRGGAT 109
GS R N S +NG RRG ++ KD D + EGK K+ GA+
Sbjct: 459 TGSGRGNNYSADNGSYRGRRGSAYIVKDADGYST-VEGKPLKKVGAS 504
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 91.7 bits (226), Expect = 5e-16
Identities = 99/306 (32%), Positives = 133/306 (43%), Gaps = 5/306 (1%)
Frame = -1
Query: 1002 EQGTTVASRVVSQQQTETSPTKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXX 823
E+ + S VS QQ+ + T K NQ+RE S R+IR IL NK+AR
Sbjct: 280 EREISQVSGSVSHQQSASVKTI-ISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLH 338
Query: 822 XXXQIESSDLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAG 643
QI + + +DKR R + + + +D DDKV+ N H
Sbjct: 339 SEQQISNLE-KDKRPPRPSHVQLVMKD---------------TNGVSDDKVIVNDLH--- 379
Query: 642 HISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQA 463
SEK+E+RTRNKDRPDR WT LRRS+G + SDE L + A
Sbjct: 380 --SEKQERRTRNKDRPDRAAWT-LRRSDGSYQSDESL-----------------SSSASQ 419
Query: 462 VASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDV 283
++ S VD E +G G LS
Sbjct: 420 LSLSAVDSSEG------------------------NLGDGKFDLSNM------------- 442
Query: 282 PNANRGGQIKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT 109
R G++K+ G R++ SS++NG RH RRGP+H KD D V +EGK +RGGA+
Sbjct: 443 ----RSGEVKAVGGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DGSPVMSEGKPLRRGGAS 496
Query: 108 ---SHE 100
SHE
Sbjct: 497 GYGSHE 502
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 87.4 bits (215), Expect = 9e-15
Identities = 91/303 (30%), Positives = 135/303 (44%), Gaps = 3/303 (0%)
Frame = -1
Query: 1002 EQGTTVASRVVSQQQTETSPTKNFP-VSTSKVNQQREASARMIRSILSNKEARXXXXXXX 826
++G V+ ++QQ +S KN P +S K NQ++EAS R+IRSIL K+AR
Sbjct: 278 KEGPNVSGGSLAQQNV-SSALKNSPSLSALKQNQRQEASGRIIRSILL-KDARQNQSA-- 333
Query: 825 XXXXQIESSDLEDK--RTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHH 652
+S ++DK R R + + +D +DKVVGN H
Sbjct: 334 -----FQSDQIQDKDMRPPRPPSMQLFQKD---------------TSGANEDKVVGNEKH 373
Query: 651 TAGHISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTI 472
HI EK+E+R+RN+DRPDRG W PLRR++ AS+ L
Sbjct: 374 VV-HI-EKQERRSRNRDRPDRGVWAPLRRADSSQASNGSL-------------------- 411
Query: 471 AQAVASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVK 292
SSG+ PQ+ + + GG E+K
Sbjct: 412 -----SSGI------------------PQSSQV----REFVEGGQG-----------ELK 433
Query: 291 VDVPNANRGGQIKSHGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRGGA 112
D+P A RG + + GS RN+ SS +NG +++ G G +DV + EGK K+GG
Sbjct: 434 NDLPIA-RGTEFRPIGSGRNSHSSADNG--NYKHGGRRGLRDVAGTSI-GEGKPVKKGGT 489
Query: 111 TSH 103
+++
Sbjct: 490 SAY 492
>ref|XP_003598033.1| B3 domain-containing protein [Medicago truncatula]
gi|355487081|gb|AES68284.1| B3 domain-containing protein
[Medicago truncatula]
Length = 1203
Score = 85.1 bits (209), Expect = 4e-14
Identities = 87/296 (29%), Positives = 125/296 (42%), Gaps = 4/296 (1%)
Frame = -1
Query: 975 VVSQQQTETSPTKNFPV-STSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESS 799
+V QQ +++ N P+ +T+K NQ+REA R+IRSIL N E+R +
Sbjct: 299 MVKQQNAQSA---NLPIPTTAKQNQRREAGGRLIRSILLNNESRQSQSTSTAQHKIQILT 355
Query: 798 DLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEK 619
+R R +RS D D+K V H +G I +K E+
Sbjct: 356 SENGRRPPRPFGSRSGLSDQVSSHDAGHVNSEGESKRDLDEKFVRRDFHGSG-IGDKTER 414
Query: 618 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDV 439
RTRNKDRPDRG W PLRRS+ H+S+E L ++AQ+ S+
Sbjct: 415 RTRNKDRPDRGVWAPLRRSDSSHSSNE----------------LSSSSLAQSAPSN---- 454
Query: 438 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 259
S GE +N A +G NR G+
Sbjct: 455 --------PESVEGEVKEN---AYSG-----------------------------NRSGE 474
Query: 258 IKSHGSSRNNFSSIENGGRHF--RRGPSHGSKDVDNFMVPTEGKSSKRG-GATSHE 100
+ R++ S+ENG + RRG + KD D + +EGK SK+G G ++HE
Sbjct: 475 FSASAGGRSS-PSVENGSQRIFTRRGAPYIVKD-DGAVSSSEGKLSKKGVGNSTHE 528
>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
putative isoform 1 [Theobroma cacao]
Length = 514
Score = 84.7 bits (208), Expect = 6e-14
Identities = 97/296 (32%), Positives = 123/296 (41%), Gaps = 5/296 (1%)
Frame = -1
Query: 972 VSQQQTETSPTKNFPVST-SKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSD 796
V QQ TSP K ST +K N +RE RMIR IL NK+AR QI +S+
Sbjct: 291 VLHQQNVTSPIKTILGSTPTKQNSRREG--RMIRGILLNKDARQNQSSGVQSEQQIRTSN 348
Query: 795 LE-DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEK 619
LE D+R R + + + +D DDKVVGN H SEK E+
Sbjct: 349 LEKDRRPPRHSHSHLVLKD---------------TNTASDDKVVGNDLHG----SEKPER 389
Query: 618 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDV 439
R RNKDRPDRG WT LRRS+G +ASDE + + A A +D
Sbjct: 390 RCRNKDRPDRGVWT-LRRSDGSYASDESM-----------------SSSASQSALIPLDP 431
Query: 438 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 259
+E TK VD+ N R Q
Sbjct: 432 LEGTYGDTK----------------------------------------VDLSNV-RSVQ 450
Query: 258 IKSHGSSRNNFSSIENGGRHFRRGPSHGSKDVDNFMVPTEGKSSKRG---GATSHE 100
+K+ GS RN SS++NG + + S D V ++GK KRG G SHE
Sbjct: 451 VKTVGSGRN--SSLDNGSHN--KHVSRRGAVADGSSVMSDGKPGKRGCAAGYGSHE 502
>gb|EMS47492.1| Regulator of nonsense transcripts 3A [Triticum urartu]
Length = 509
Score = 84.0 bits (206), Expect = 1e-13
Identities = 86/294 (29%), Positives = 116/294 (39%), Gaps = 4/294 (1%)
Frame = -1
Query: 969 SQQQTETSPTKNFPVSTSKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESSDLE 790
S Q P++N P STS+ +Q+ EAS R+I++ILSNKE R S +
Sbjct: 249 STPQQSLPPSRNTPPSTSRQDQRNEASGRIIKTILSNKEGRHAIASSQHEQEGHIISAEK 308
Query: 789 DKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEKRTR 610
DKR RA +RS +D DDK + H +G I EK E+ R
Sbjct: 309 DKRPPRAPNSRSTVKDQ---------TVENAEKNHYDDKHL----HGSGPIGEKIERHAR 355
Query: 609 NKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDVIED 430
N+DRPDRG W P R + AS G
Sbjct: 356 NRDRPDRGVWAPRRYDKS--------------------------------ASGG---STQ 380
Query: 429 MDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPN-ANRGGQIK 253
SS P N ++G H E K+D + RGG +
Sbjct: 381 ASSSEFPLMQSHSMDNFSQQVDG------------------HGERKIDTRSPGGRGGLV- 421
Query: 252 SHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGAT--SHE 100
ENG RH RRGP GSK+++ ++ ++GK SKRG A+ +HE
Sbjct: 422 ------------ENGNRHANRRGPPRGSKEMEIPLITSDGKPSKRGPASYVAHE 463
>ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296641 [Fragaria vesca
subsp. vesca]
Length = 515
Score = 83.2 bits (204), Expect = 2e-13
Identities = 86/299 (28%), Positives = 115/299 (38%), Gaps = 3/299 (1%)
Frame = -1
Query: 993 TTVASRVVSQQQTETSPTKNFPVSTS-KVNQQREASARMIRSILSNKEARXXXXXXXXXX 817
T A +SQ Q + PVS S K NQ+R+AS R +RSILS+ E R
Sbjct: 271 TPPAPEGISQHQASIGSS---PVSASPKQNQRRDASGRFLRSILSHNEVRQREASAEVQS 327
Query: 816 XQ-IESSDLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGH 640
Q I + + KR R + AR + DK H +
Sbjct: 328 QQKILGPNSDIKRVPRPSNARLGLNNE-----TNSMSSEGDRRRVMVDKFTKKDMHGTTN 382
Query: 639 ISEKKEKRTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAV 460
ISEK+++ TRNKDRPDRG WTPLRR+E H SDE L
Sbjct: 383 ISEKQDRHTRNKDRPDRGVWTPLRRAESSHNSDEHL------------------------ 418
Query: 459 ASSGVDVIEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVP 280
+S +P + + + + H EVK D
Sbjct: 419 ---------SSSASQRPQLLSDSVE------------------------VPHGEVKADTS 445
Query: 279 NANRGGQIKSHGSSRNNFSSIENGGRHF-RRGPSHGSKDVDNFMVPTEGKSSKRGGATS 106
+R G++ + RHF RRG + KD D + +EGKSSKRG A +
Sbjct: 446 YGSRTGEVPT------------GSNRHFGRRGTASSMKD-DGSLNTSEGKSSKRGAAAA 491
>ref|XP_004499561.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Cicer arietinum] gi|502127102|ref|XP_004499562.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X5 [Cicer arietinum]
Length = 567
Score = 82.8 bits (203), Expect = 2e-13
Identities = 93/318 (29%), Positives = 134/318 (42%), Gaps = 5/318 (1%)
Frame = -1
Query: 975 VVSQQQTETSPTKNFPVST-SKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESS 799
+V QQ +++ N P+ST SK NQ+REAS R+IRSIL N E+R +
Sbjct: 292 MVKQQNAQSA---NSPISTTSKQNQRREASGRLIRSILLNSESRQSQPTSAAQHKIQILA 348
Query: 798 DLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEK 619
KR R +RS S D D+K + H + +K E+
Sbjct: 349 SENGKRPPRPFGSRSGSSDQISSHDGGQVNSEGDSKRALDEKFIRRDLHGLSIVGDKTER 408
Query: 618 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDV 439
RTRNKDRPDRG W PLRRS+ + +E ++A++ S+
Sbjct: 409 RTRNKDRPDRGVWAPLRRSDSSPSGNE----------------HSSSSLAESTLSN---- 448
Query: 438 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 259
S GE +N +G + G +A+ GG+
Sbjct: 449 --------PESVEGEVKEN---VYSGNRTGEF---------------------SASSGGR 476
Query: 258 IKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRG--GATSHEVR* 91
+ SS+ENG R+F RRG + KD D + +EGK SK+G G ++HEV
Sbjct: 477 ---------SSSSVENGSQRNFTRRGAPYTVKD-DCAVSLSEGKLSKKGVAGHSTHEV-- 524
Query: 90 YFVILIQVSLLFFMTYLL 37
+ + +FF T LL
Sbjct: 525 ----YMSYTDVFFPTSLL 538
>ref|XP_004499560.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3
[Cicer arietinum]
Length = 568
Score = 82.8 bits (203), Expect = 2e-13
Identities = 93/318 (29%), Positives = 134/318 (42%), Gaps = 5/318 (1%)
Frame = -1
Query: 975 VVSQQQTETSPTKNFPVST-SKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESS 799
+V QQ +++ N P+ST SK NQ+REAS R+IRSIL N E+R +
Sbjct: 292 MVKQQNAQSA---NSPISTTSKQNQRREASGRLIRSILLNSESRQSQPTSAAQHKIQILA 348
Query: 798 DLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEK 619
KR R +RS S D D+K + H + +K E+
Sbjct: 349 SENGKRPPRPFGSRSGSSDQISSHDGGQVNSEGDSKRALDEKFIRRDLHGLSIVGDKTER 408
Query: 618 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDV 439
RTRNKDRPDRG W PLRRS+ + +E ++A++ S+
Sbjct: 409 RTRNKDRPDRGVWAPLRRSDSSPSGNE----------------HSSSSLAESTLSN---- 448
Query: 438 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 259
S GE +N +G + G +A+ GG+
Sbjct: 449 --------PESVEGEVKEN---VYSGNRTGEF---------------------SASSGGR 476
Query: 258 IKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRG--GATSHEVR* 91
+ SS+ENG R+F RRG + KD D + +EGK SK+G G ++HEV
Sbjct: 477 ---------SSSSVENGSQRNFTRRGAPYTVKD-DCAVSLSEGKLSKKGVAGHSTHEV-- 524
Query: 90 YFVILIQVSLLFFMTYLL 37
+ + +FF T LL
Sbjct: 525 ----YMSYTDVFFPTSLL 538
>ref|XP_004499559.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Cicer arietinum]
Length = 570
Score = 82.8 bits (203), Expect = 2e-13
Identities = 93/318 (29%), Positives = 134/318 (42%), Gaps = 5/318 (1%)
Frame = -1
Query: 975 VVSQQQTETSPTKNFPVST-SKVNQQREASARMIRSILSNKEARXXXXXXXXXXXQIESS 799
+V QQ +++ N P+ST SK NQ+REAS R+IRSIL N E+R +
Sbjct: 292 MVKQQNAQSA---NSPISTTSKQNQRREASGRLIRSILLNSESRQSQPTSAAQHKIQILA 348
Query: 798 DLEDKRTTRATAARSISRDHFXXXXXXXXXXXXXXXXXXDDKVVGNVHHTAGHISEKKEK 619
KR R +RS S D D+K + H + +K E+
Sbjct: 349 SENGKRPPRPFGSRSGSSDQISSHDGGQVNSEGDSKRALDEKFIRRDLHGLSIVGDKTER 408
Query: 618 RTRNKDRPDRGFWTPLRRSEGLHASDECLPXXXXXXXXXXXXXLEEKTIAQAVASSGVDV 439
RTRNKDRPDRG W PLRRS+ + +E ++A++ S+
Sbjct: 409 RTRNKDRPDRGVWAPLRRSDSSPSGNE----------------HSSSSLAESTLSN---- 448
Query: 438 IEDMDSSTKPSFIGEKPQNHDIALNGTQIGRGGMSLSTYDAPLSHLEVKVDVPNANRGGQ 259
S GE +N +G + G +A+ GG+
Sbjct: 449 --------PESVEGEVKEN---VYSGNRTGEF---------------------SASSGGR 476
Query: 258 IKSHGSSRNNFSSIENGG-RHF-RRGPSHGSKDVDNFMVPTEGKSSKRG--GATSHEVR* 91
+ SS+ENG R+F RRG + KD D + +EGK SK+G G ++HEV
Sbjct: 477 ---------SSSSVENGSQRNFTRRGAPYTVKD-DCAVSLSEGKLSKKGVAGHSTHEV-- 524
Query: 90 YFVILIQVSLLFFMTYLL 37
+ + +FF T LL
Sbjct: 525 ----YMSYTDVFFPTSLL 538