BLASTX nr result
ID: Cocculus22_contig00006369
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00006369
(3282 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp... 808 0.0
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun... 790 0.0
emb|CBI34982.3| unnamed protein product [Vitis vinifera] 788 0.0
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp... 774 0.0
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp... 769 0.0
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp... 766 0.0
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr... 765 0.0
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp... 760 0.0
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The... 754 0.0
ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp... 753 0.0
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp... 750 0.0
ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297... 746 0.0
ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp... 737 0.0
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The... 733 0.0
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp... 733 0.0
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp... 730 0.0
ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2... 726 0.0
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti... 726 0.0
ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Caps... 724 0.0
ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp... 724 0.0
>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 808 bits (2088), Expect = 0.0
Identities = 468/934 (50%), Positives = 575/934 (61%), Gaps = 7/934 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWRR+EVVKIRCED+C+ NMKRTHD+LERKTGGLV+WRSGS I+LYR
Sbjct: 210 AGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYR 269
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G NYKYPYFL+D N+ N DS+ D++ S S +N
Sbjct: 270 GANYKYPYFLSDNNLPN-----------------DSSHDAS----------SDSQMNNEE 302
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
H S P P ++ S+++GVG P +VRFQLPGE QL EEAD LL+G
Sbjct: 303 HDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDG 362
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMT L+RL R LP
Sbjct: 363 LGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPC 422
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNR LQGLAASM+KLWEKCEIAKIAVKRGVQNTNS+MMAEELK LTGGTL++R
Sbjct: 423 HFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDR 482
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPAVS+A++ RRK + G+ L + + D+
Sbjct: 483 EFIVFYRGKDFLPPAVSSAIEARRKYGIH--RGKQKIDHHRLAINAEESELGTSEHASDK 540
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
+D ++ SK LRS +V N KL++ +PE
Sbjct: 541 DCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPE 600
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
+D+EGIT+EERYML++VG RMKP+L +GRRG+FDGT+ENMHLHWKYRELVKIIS R IE
Sbjct: 601 IDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIE 660
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
D H AR LEAESGGIL+AVER KGYAII+YRGKNY RP LRP+TLLNK++ALKRS+E
Sbjct: 661 DIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLE 720
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR ESLKLH+L++++NI+ LK Q+V S ++ + D S L
Sbjct: 721 AQRRESLKLHVLRLTRNIDELKHQLV----------SRIKDKETNSKQLVDKSRL----- 765
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPA- 1306
A + Y +D L+HS+ GM S DKRI S D
Sbjct: 766 -------------HLARERYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDSDTD 812
Query: 1305 ETEHEFSSESVPK---GSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSN 1135
E E SSESV K +VL EG + C E+L C +
Sbjct: 813 EANPEPSSESVLKEIETNVLTDMNEEGE---CTTCSEDLVSQGETSCYA----------- 858
Query: 1134 LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHR--DEM 961
++ H +++ESSVK+ ++EFK R D
Sbjct: 859 ---------------------------IVNH---EETMESSVKSSKNEFKPPVQRPVDTR 888
Query: 960 QNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPL 781
N + P R+ LSNR+RLLLRKQAL+MKKRPV+AVG+SN++TGVAKTIK HF+KHPL
Sbjct: 889 SN----EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPL 944
Query: 780 AIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKR-NV 604
AIV+VKGRAKGTS+QE++FKLE+ATG+VLVSQEP+KVILYRGWG EE + + R +
Sbjct: 945 AIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNRSDA 1004
Query: 603 RSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQE 502
R G + VSP+L AIRLECGL +Q+
Sbjct: 1005 RKTSAGREGGPRPTVSPELRAAIRLECGLKSNQD 1038
Score = 64.7 bits (156), Expect = 3e-07
Identities = 37/105 (35%), Positives = 57/105 (54%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
+ +EE LK +G +++ L +G+ G+ +G + +H W+ E+VKI D C + RT
Sbjct: 186 LPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRT 245
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLN 1693
LE ++GG++I R G II+YRG NY P L L N
Sbjct: 246 HDILERKTGGLVI----WRSGSYIILYRGANYKYPYFLSDNNLPN 286
>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
gi|462413233|gb|EMJ18282.1| hypothetical protein
PRUPE_ppa000515mg [Prunus persica]
Length = 1117
Score = 790 bits (2039), Expect = 0.0
Identities = 471/981 (48%), Positives = 601/981 (61%), Gaps = 50/981 (5%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHE WRRSEVVKI CEDLCR NMKRTHD+LERKTGGLVVWRSGS IVLYR
Sbjct: 187 AGITEGIVNGIHENWRRSEVVKIVCEDLCRMNMKRTHDMLERKTGGLVVWRSGSKIVLYR 246
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
GVNYKYPYFL D VD +DST+ D ++A P A
Sbjct: 247 GVNYKYPYFLRDK--------------------VD--EDSTI---DTSHNALPD-----A 276
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
H + + ++ +S+ PS +V+GVG+ ++VRFQLPGE QL EEADH+L G
Sbjct: 277 HINDGINEISNEVNSAIIPSTTNERAQPMLVKGVGLQDRVRFQLPGEAQLTEEADHMLEG 336
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYRKPFRLLPYG++PKLT DEMTT++RL R LP
Sbjct: 337 LGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGLKPKLTDDEMTTIRRLGRPLPC 396
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLA+S+VKLWEKCEIAKIAVKRGVQNTN+++MAEELK LTGGTL+AR
Sbjct: 397 HFALGRNRNLQGLASSIVKLWEKCEIAKIAVKRGVQNTNTEIMAEELKRLTGGTLLARDR 456
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIV YRGKDFLPPAVS+A++ERRK + E + E +++ + EPR + +
Sbjct: 457 EFIVLYRGKDFLPPAVSSAIEERRKYAIHAEK-QIAEHGTSVTTRQELEPRTEP----EN 511
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
+ ++ + L S + KL+S +V+ + KL++ +PE
Sbjct: 512 KHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPE 571
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
+D+EGITKEERYML++VG RMKP+L MGRRGVFDGTIENMHLHWKYRELVKII ++ IE
Sbjct: 572 IDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIE 631
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
+ A+ LEAESGGIL+AVER KGYAII+YRGKNY RP LRP+TLLNK++A+KRSIE
Sbjct: 632 AVQQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIE 691
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKD-------------------------------- 1579
AQR ESLKLH+L++++NI+ LK +VKD
Sbjct: 692 AQRRESLKLHVLRLNENIDELKLLLVKDKEADNLQSVGESRNELARDKQEAHVTPVNLND 751
Query: 1578 --GLETKSVLSTDCERPDTESETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTL 1405
G L+T + + S T+D +G + +NE T ++ V+ S+ ++
Sbjct: 752 GMGAVVNGQLATQQDEVISFSSTWDEDEIGKFKPGSSNESVTNEEDEIGKVEPGPSNESV 811
Query: 1404 LHSNPG--MSDSSCKQGGIQPDKRIGAYSQSDKPA----ETEHEFSSESVPKGSVLITYP 1243
+ P + D++ + G D + + PA E H + K +T P
Sbjct: 812 TNETPANFLKDTNGEVG----DFVSTCFPEDVMPAGVISEIVHVLFFKGRGKQEAHVT-P 866
Query: 1242 VEGAQIGASICKENL--ELDKTID----CCSKSGQKSSPDSN----LRVTHLSSFPDEVE 1093
++ +I L + DK I CC + P S+ TH + F D
Sbjct: 867 MKLNDGMGTIVNGQLATQQDKVITFSSICCEDENGEVEPISSSEPVTNETHANLFRDVNG 926
Query: 1092 NEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLS 913
E ++ S FP + + +SS + G E + S M + P++SV LS
Sbjct: 927 EEGVSISTSFPEDAMAK-------DSSGRFGNSESEPSV--PVMVRKDFNERPLKSVHLS 977
Query: 912 NRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQE 733
N +RLLLRKQALKMKKRPVLAVG++N+++GVAKTIK HFEKHPLAIV+VKGRAKGTS++E
Sbjct: 978 NGERLLLRKQALKMKKRPVLAVGRNNIVSGVAKTIKAHFEKHPLAIVNVKGRAKGTSVRE 1037
Query: 732 LVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSP 553
+V KLE+ATG VLVSQEP+KVILYRGWG A + +K N R + ST VSP
Sbjct: 1038 VVLKLEQATGGVLVSQEPSKVILYRGWGAAGD---NDRKASNTRKKV-----STQGAVSP 1089
Query: 552 QLIKAIRLECGLDGSQENEVT 490
+L+ AIRLECG + + T
Sbjct: 1090 ELLAAIRLECGFKSPGKEDAT 1110
Score = 64.7 bits (156), Expect = 3e-07
Identities = 35/108 (32%), Positives = 58/108 (53%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + + K E L VG ++ L +G+ G+ +G + +H +W+ E+VKI+ D C
Sbjct: 156 PTLAELSLGKGELRRLTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCEDLC 215
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPR 1705
+ RT LE ++GG+++ R G I++YRG NY P LR +
Sbjct: 216 RMNMKRTHDMLERKTGGLVV----WRSGSKIVLYRGVNYKYPYFLRDK 259
>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 788 bits (2034), Expect = 0.0
Identities = 455/914 (49%), Positives = 564/914 (61%), Gaps = 6/914 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWRR+EVVKIRCED+C+ NMKRTHD+LERKTGGLV+WRSGS I+LYR
Sbjct: 210 AGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYR 269
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G NYKYPYFL+D N+ N DS+ D++ S S +N
Sbjct: 270 GANYKYPYFLSDNNLPN-----------------DSSHDAS----------SDSQMNNEE 302
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
H S P P ++ S+++GVG P +VRFQLPGE QL EEAD LL+G
Sbjct: 303 HDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDG 362
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMT L+RL R LP
Sbjct: 363 LGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPC 422
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNR LQGLAASM+KLWEKCEIAKIAVKRGVQNTNS+MMAEELK LTGGTL++R
Sbjct: 423 HFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDR 482
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPAVS+A++ RRK + G+ L + + D+
Sbjct: 483 EFIVFYRGKDFLPPAVSSAIEARRKYGIH--RGKQKIDHHRLAINAEESELGTSEHASDK 540
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
+D ++ SK LRS +V N KL++ +PE
Sbjct: 541 DCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPE 600
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
+D+EGIT+EERYML++VG RMKP+L +GRRG+FDGT+ENMHLHWKYRELVKIIS R IE
Sbjct: 601 IDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIE 660
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
D H AR LEAESGGIL+AVER KGYAII+YRGKNY RP LRP+TLLNK++ALKRS+E
Sbjct: 661 DIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLE 720
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR ESLKLH+L++++NI+ LK Q+V S ++ + D S L
Sbjct: 721 AQRRESLKLHVLRLTRNIDELKHQLV----------SRIKDKETNSKQLVDKSRL----- 765
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPA- 1306
A + Y +D L+HS+ GM S DKRI S D
Sbjct: 766 -------------HLARERYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDSDTD 812
Query: 1305 ETEHEFSSESVPK---GSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSN 1135
E E SSESV K +VL EG + C E+L C +
Sbjct: 813 EANPEPSSESVLKEIETNVLTDMNEEGE---CTTCSEDLVSQGETSCYA----------- 858
Query: 1134 LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHR--DEM 961
++ H +++ESSVK+ ++EFK R D
Sbjct: 859 ---------------------------IVNH---EETMESSVKSSKNEFKPPVQRPVDTR 888
Query: 960 QNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPL 781
N + P R+ LSNR+RLLLRKQAL+MKKRPV+AVG+SN++TGVAKTIK HF+KHPL
Sbjct: 889 SN----EMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPL 944
Query: 780 AIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVR 601
AIV+VKGRAKGTS+QE++FKLE+ATG+VLVSQEP+KVILYRGWG EE + + R +
Sbjct: 945 AIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGAREENGRSYRMNR-IN 1003
Query: 600 SALTGTDDSTTEVV 559
++++T++V
Sbjct: 1004 IVFKSAEENSTQMV 1017
Score = 64.7 bits (156), Expect = 3e-07
Identities = 37/105 (35%), Positives = 57/105 (54%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
+ +EE LK +G +++ L +G+ G+ +G + +H W+ E+VKI D C + RT
Sbjct: 186 LPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRT 245
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLN 1693
LE ++GG++I R G II+YRG NY P L L N
Sbjct: 246 HDILERKTGGLVI----WRSGSYIILYRGANYKYPYFLSDNNLPN 286
>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 1076
Score = 774 bits (1998), Expect = 0.0
Identities = 452/938 (48%), Positives = 569/938 (60%), Gaps = 9/938 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD LERKTGGLVVWRSGS I+LYR
Sbjct: 204 AGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVVWRSGSKIILYR 263
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFLAD + T+ D D T G +SA PS
Sbjct: 264 GADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDETKTHSSGADSAKPS------ 313
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
SP + +++ VG P+K+R+QLPGE +LVEEAD LL+G
Sbjct: 314 -----------------GQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDG 356
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 357 LGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPC 416
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS+MMA+ELK LTGGTL++R
Sbjct: 417 HFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDR 476
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPA S A++ERRK+ T N E + DE +
Sbjct: 477 EFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTND 536
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
E+++ +S EV +R T+ +S K A E
Sbjct: 537 QKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY--------E 588
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
VD+EGIT+EERYML++VG RMK +L MGRRGVFDGT+ENMHLHWK+RELVKIIS R IE
Sbjct: 589 VDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIE 648
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K++A+KRS+E
Sbjct: 649 AALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLE 708
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR +SLKLH+L++++NIE LK Q+VKD + P + E +G+
Sbjct: 709 AQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEE------IGDMQP 762
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSD-KPA 1306
+ T + + +A +D T SN + IQ DK+ + + +
Sbjct: 763 AECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISIN 822
Query: 1305 ETEHEFSSESVPKGS---VLITYPVEGAQIGASICKEN-----LELDKTIDCCSKSGQKS 1150
E E + S +SV K S ++ + EG G S C +N +E + +D S
Sbjct: 823 EIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNE 882
Query: 1149 SPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHR 970
+S++ S+ ENE + S + G + + + G +++
Sbjct: 883 PRESSIE----SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGTGNVWNENNS-- 929
Query: 969 DEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEK 790
R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN++TGVAK IK HFEK
Sbjct: 930 -------------RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEK 976
Query: 789 HPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKR 610
+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG +E S ++
Sbjct: 977 YPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNS 1036
Query: 609 NVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 496
+ ++ D VS +L+ AI+LECGL G QE E
Sbjct: 1037 RAKPSIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1073
Score = 61.6 bits (148), Expect = 2e-06
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
++ +E L+ +G ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 1062
Score = 770 bits (1987), Expect = 0.0
Identities = 451/933 (48%), Positives = 566/933 (60%), Gaps = 4/933 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD LERKTGGLVVWRSGS I+LYR
Sbjct: 204 AGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVVWRSGSKIILYR 263
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFLAD + T+ D D T G +SA PS
Sbjct: 264 GADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDETKTHSSGADSAKPS------ 313
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
SP + +++ VG P+K+R+QLPGE +LVEEAD LL+G
Sbjct: 314 -----------------GQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDG 356
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 357 LGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPC 416
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS+MMA+ELK LTGGTL++R
Sbjct: 417 HFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDR 476
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPA S A++ERRK+ T N E + DE +
Sbjct: 477 EFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTND 536
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
E+++ +S EV +R T+ +S K A E
Sbjct: 537 QKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY--------E 588
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
VD+EGIT+EERYML++VG RMK +L MGRRGVFDGT+ENMHLHWK+RELVKIIS R IE
Sbjct: 589 VDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIE 648
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K++A+KRS+E
Sbjct: 649 AALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLE 708
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR +SLKLH+L++++NIE LK Q+VKD + P + E +G+
Sbjct: 709 AQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEE------IGDMQP 762
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSD-KPA 1306
+ T + + +A +D T SN + IQ DK+ + + +
Sbjct: 763 AECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISIN 822
Query: 1305 ETEHEFSSESVPKGS---VLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSN 1135
E E + S +SV K S ++ + EG G S C +N CS + +S+
Sbjct: 823 EIESKSSLKSVSKESQLNMIADFFAEGVASGTSSCPDN-------SMCSSDNEPR--ESS 873
Query: 1134 LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQN 955
+ S+ ENE + S + G + + + G +++
Sbjct: 874 IE----SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGTGNVWNENNS------- 915
Query: 954 GSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAI 775
R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN++TGVAK IK HFEK+PLAI
Sbjct: 916 --------RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAI 967
Query: 774 VDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSA 595
V+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG +E S ++ + +
Sbjct: 968 VNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPS 1027
Query: 594 LTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 496
+ D VS +L+ AI+LECGL G QE E
Sbjct: 1028 IV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1059
Score = 61.6 bits (148), Expect = 2e-06
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
++ +E L+ +G ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X4 [Citrus sinensis]
Length = 1050
Score = 766 bits (1978), Expect = 0.0
Identities = 446/934 (47%), Positives = 559/934 (59%), Gaps = 5/934 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD LERKTGGLVVWRSGS I+LYR
Sbjct: 204 AGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVVWRSGSKIILYR 263
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFLAD + T+ D D T G +SA PS
Sbjct: 264 GADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDETKTHSSGADSAKPS------ 313
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
SP + +++ VG P+K+R+QLPGE +LVEEAD LL+G
Sbjct: 314 -----------------GQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDG 356
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 357 LGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPC 416
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS+MMA+ELK LTGGTL++R
Sbjct: 417 HFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDR 476
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPA S A++ERRK+ T N E + DE +
Sbjct: 477 EFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTND 536
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
E+++ +S EV +R T+ +S K A E
Sbjct: 537 QKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY--------E 588
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
VD+EGIT+EERYML++VG RMK +L MGRRGVFDGT+ENMHLHWK+RELVKIIS R IE
Sbjct: 589 VDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIE 648
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K++A+KRS+E
Sbjct: 649 AALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLE 708
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR +SLKLH+L++++NIE LK Q+VKD + P + E +G+
Sbjct: 709 AQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEE------IGDMQP 762
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPAE 1303
+ T + + +A +D T SN + IQ DK+ + + +D
Sbjct: 763 AECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHND---- 818
Query: 1302 TEHEFSSESVPKGSVLITYPVEGAQIGASICKEN-----LELDKTIDCCSKSGQKSSPDS 1138
+ EG G S C +N +E + +D S +S
Sbjct: 819 ------------------FFAEGVASGTSSCPDNSMQEVMEYNTIVDAEQCSSDNEPRES 860
Query: 1137 NLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQ 958
++ S+ ENE + S + G + + + G +++
Sbjct: 861 SIE----SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGTGNVWNENNS------ 903
Query: 957 NGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLA 778
R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN++TGVAK IK HFEK+PLA
Sbjct: 904 ---------RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLA 954
Query: 777 IVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRS 598
IV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG +E S ++ +
Sbjct: 955 IVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKP 1014
Query: 597 ALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENE 496
++ D VS +L+ AI+LECGL G QE E
Sbjct: 1015 SIV-RDVRPWPAVSRELLAAIKLECGLQGQQEQE 1047
Score = 61.6 bits (148), Expect = 2e-06
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
++ +E L+ +G ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
gi|557533064|gb|ESR44247.1| hypothetical protein
CICLE_v10013715mg [Citrus clementina]
Length = 1062
Score = 765 bits (1976), Expect = 0.0
Identities = 463/946 (48%), Positives = 569/946 (60%), Gaps = 17/946 (1%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD LERKTGGLVVWRSGS I+LYR
Sbjct: 204 AGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVVWRSGSKIILYR 263
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFLAD + T+ D D T G +SA PS
Sbjct: 264 GADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDETKTHSSGADSAKPS------ 313
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
SP + +++ VG P+K+R+QLPGE +LVEEAD LL+G
Sbjct: 314 -----------------GQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDG 356
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 357 LGPRFTDWWGYDPQPVDADLLPATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPC 416
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS+MMA+ELK LTGGTL++R
Sbjct: 417 HFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDR 476
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPA S+A++ERRK+ T N E + DE +
Sbjct: 477 EFIVFYRGKDFLPPAASSAIEERRKHEFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTND 536
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
E+++ +S EV +R TS +S K A E
Sbjct: 537 QTSTMHSEQKERRSAEVAIRRTSIRLSRALEKKAEAEKLLAELEEERPEQY--------E 588
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
VD+EGIT+EERYML++VG RMK +L MGRRGVFDGT+ENMHLHWK+RELVKIIS R IE
Sbjct: 589 VDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIE 648
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K++A+KRS+E
Sbjct: 649 AALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLE 708
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR +SLKLH+L++++NIE LK Q+VKD E S+ E D GS +
Sbjct: 709 AQRRQSLKLHVLELTRNIEKLKLQLVKD-KEANSL-----ETIDESILPLVGSIIFLMIW 762
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSD-KPA 1306
+ +N + +A +D T SN + IQ DK+ + + +
Sbjct: 763 KSSNIPEIVFGIFFKARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGISFN 822
Query: 1305 ETEHEFSSESVPKGS---VLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSN 1135
E E E S +SV K S ++ + EG G C +N CS +
Sbjct: 823 EIESESSLKSVSKESQLNMIADFFAEGVASGTPSCPDN-------SMCSSDNE------- 868
Query: 1134 LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQN 955
P SIES+ K+ E + + E+
Sbjct: 869 --------------------------------PRESSIESA-KSRSSENEPIEQCFELAK 895
Query: 954 G-SGVKGPI-----------RSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKT 811
G SG+ PI R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN++TGVAK
Sbjct: 896 GRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKA 955
Query: 810 IKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPS 631
IK HFEK+PLAIV+VKGRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG +E S
Sbjct: 956 IKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESS 1015
Query: 630 VTKKKKRNVRSALTGTDD-STTEVVSPQLIKAIRLECGLDGSQENE 496
+ ++N R+ L+ D VS +L+ AI+LECGL G QE E
Sbjct: 1016 --PRGRQNSRAKLSIVRDVRPWPAVSRELLAAIKLECGLQGQQEQE 1059
Score = 61.6 bits (148), Expect = 2e-06
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
++ +E L+ +G ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 1045
Score = 760 bits (1963), Expect = 0.0
Identities = 444/929 (47%), Positives = 558/929 (60%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD LERKTGGLVVWRSGS I+LYR
Sbjct: 204 AGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVVWRSGSKIILYR 263
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFLAD + T+ D D T G +SA PS
Sbjct: 264 GADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDETKTHSSGADSAKPS------ 313
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
SP + +++ VG P+K+R+QLPGE +LVEEAD LL+G
Sbjct: 314 -----------------GQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDG 356
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 357 LGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPC 416
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS+MMA+ELK LTGGTL++R
Sbjct: 417 HFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDR 476
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPA S A++ERRK+ T N E + DE +
Sbjct: 477 EFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTND 536
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
E+++ +S EV +R T+ +S K A E
Sbjct: 537 QKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY--------E 588
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
VD+EGIT+EERYML++VG RMK +L MGRRGVFDGT+ENMHLHWK+RELVKIIS R IE
Sbjct: 589 VDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIE 648
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K++A+KRS+E
Sbjct: 649 AALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLE 708
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR +SLKLH+L++++NIE LK Q+VKD + P + E +G+
Sbjct: 709 AQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEE------IGDMQP 762
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPAE 1303
+ T + + +A +D T SN + IQ DK+ + + + +
Sbjct: 763 AECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHNGVASG 822
Query: 1302 TEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSNLRVT 1123
T S P S+ +E +E + +D S +S++
Sbjct: 823 T------SSCPDNSM----------------QEVMEYNTIVDAEQCSSDNEPRESSIE-- 858
Query: 1122 HLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQNGSGV 943
S+ ENE + S + G + + + G +++
Sbjct: 859 --SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGTGNVWNENNS----------- 898
Query: 942 KGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVK 763
R++ LSNRDRLLLRKQAL+MKKRPVLAVG+SN++TGVAK IK HFEK+PLAIV+VK
Sbjct: 899 ----RAIQLSNRDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVK 954
Query: 762 GRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGT 583
GRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG +E S ++ + ++
Sbjct: 955 GRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIV-R 1013
Query: 582 DDSTTEVVSPQLIKAIRLECGLDGSQENE 496
D VS +L+ AI+LECGL G QE E
Sbjct: 1014 DVRPWPAVSRELLAAIKLECGLQGQQEQE 1042
Score = 61.6 bits (148), Expect = 2e-06
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
++ +E L+ +G ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
gi|508710385|gb|EOY02282.1| CRM family member 2, putative
isoform 2 [Theobroma cacao]
Length = 1045
Score = 754 bits (1946), Expect = 0.0
Identities = 448/951 (47%), Positives = 581/951 (61%), Gaps = 20/951 (2%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWRRSEVVKI CED+C+ NMKRTH++LERKTGGLVVWRSGS I+LYR
Sbjct: 190 AGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLERKTGGLVVWRSGSKIILYR 249
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G NY+YPYFLAD T+ D ++ASP T
Sbjct: 250 GANYRYPYFLADKIATD----------------------------DTSSNASPDTNMDNV 281
Query: 2922 HSSAYPSLVNGMAHSSTS-PSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLN 2746
S + + + T+ P+ +MT +V+GVG P++VRFQLPGE +LVEEA+HLL+
Sbjct: 282 ELHETESCSSEINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLD 341
Query: 2745 GLGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLP 2566
GLGPRFTDWWG PGYR+PFRLLPYG++P LT+DEMTTL+RL R LP
Sbjct: 342 GLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLP 401
Query: 2565 YQFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARA 2386
F LGRNR LQGLAAS+VK WEKCEIAK+AVKRGVQNTNS++MAEELK LTGGTL++R
Sbjct: 402 CHFVLGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRD 461
Query: 2385 GEFIVFYRGKDFLPPAVSTAMDERRKN--RLQTENGETTEQSSNLDKIPKFEPRNDEPPS 2212
+FIV YRGKDFLP AVS+A++ERR++ ++ + E ++ ++ + ++
Sbjct: 462 KDFIVLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESK 521
Query: 2211 VDQVL-QRSD--QERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXX 2041
++ QRS+ + + +KS E +R T + KL++
Sbjct: 522 INSAKDQRSNFFGDPKNMKSAEAAIRKT-------DVKLSMALEKKAKAEKLLAELEQAE 574
Query: 2040 XXXKPEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIIS 1861
+ E+D+EGIT+EERYML++VG RMKP+L +GRRGVFDGT+ENMHLHWKYRELVKIIS
Sbjct: 575 IPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIIS 634
Query: 1860 TDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQA 1681
+ +E H+ AR LEAESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K+QA
Sbjct: 635 KETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQA 694
Query: 1680 LKRSIEAQRSESLKLHILKVSKNIEHLKRQVVKD-------GLETKSVLSTDCERPDTES 1522
+KRS+E QR +SLKLHIL +++N+ L+ Q+V D +E S+ E +S
Sbjct: 695 MKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELETLQS 754
Query: 1521 ETYDGSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDK 1342
Y GS + E E+ D S+ST + ++ ++ S +Q Q
Sbjct: 755 VEYTGSVI---------ECPASSGGHVESRDKDGSESTSMKNDKMVATISIRQPSKQEFM 805
Query: 1341 RIGAYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKS 1162
+ + +TE EFS+ESV
Sbjct: 806 EPSSIHDGFENHKTESEFSAESV------------------------------------- 828
Query: 1161 GQKSSPDSNLRVTHL------SSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVK-A 1003
+ S + LR H +S+PD + E ++DS N + N +ES V+ A
Sbjct: 829 -NRKSHATELRALHTQVEMVDTSYPDNLMEE-IDDS--GAINAEHGVSNNGPMESLVESA 884
Query: 1002 GEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITG 823
+ S + + N K + LSN+DRLLLRKQALKMKKRPVLAVG+SN++TG
Sbjct: 885 SMLDVSISSAVENVSN----KMASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTG 940
Query: 822 VAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEA 643
VAK I+ HF+KHPLAIV+VKGRAKGTS+QE+V KL++ATG+VLVSQEP+KVILYRGWG
Sbjct: 941 VAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAG 1000
Query: 642 EEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENEVT 490
+E + + RN + +L VSP+LI AIRLECGL QE E T
Sbjct: 1001 DE--LGRGDNRNAKDSLA----QNRPAVSPELIAAIRLECGLQLQQEEEAT 1045
Score = 63.2 bits (152), Expect = 8e-07
Identities = 34/102 (33%), Positives = 54/102 (52%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + ++ E L+ VG K L +G+ G+ +G + +H W+ E+VKI+ D C
Sbjct: 159 PSLAELKLSAAELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDIC 218
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+ RT LE ++GG+++ R G II+YRG NY P
Sbjct: 219 KMNMKRTHEVLERKTGGLVV----WRSGSKIILYRGANYRYP 256
>ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 1019
Score = 753 bits (1945), Expect = 0.0
Identities = 442/934 (47%), Positives = 584/934 (62%), Gaps = 12/934 (1%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWRRSEVV+I CEDLCR NMKRTHD+LERKTGGLVVWRSGS I+LYR
Sbjct: 177 AGITEGIVNGIHERWRRSEVVRIVCEDLCRINMKRTHDILERKTGGLVVWRSGSKIILYR 236
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G++YKYPYFL+D + D D ++ +DG +
Sbjct: 237 GIDYKYPYFLSDKVLR------------------DDKIDDALQHMDGDDK-------NCD 271
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
+Y S +N H+S S + R ++V+GVG PNKVRFQLPGE +L+EE D LL G
Sbjct: 272 ERESYSSEMNSTTHASHSSN--IRTVKPALVQGVGTPNKVRFQLPGEAELLEEVDSLLEG 329
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PG+R+PFRLLPYG++ LT DE+TTLKRL R LP
Sbjct: 330 LGPRFTDWWGYDPVPVDADLLPAVIPGFRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPC 389
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNR LQGLAA+++KLWE+CEIAKIAVKRGVQNT++K+MAEE+K LTGGTL++R
Sbjct: 390 HFALGRNRKLQGLAAAIIKLWERCEIAKIAVKRGVQNTSNKIMAEEIKHLTGGTLLSRDK 449
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRK---NRLQTENGETTEQSSNLDKIPKFEPRNDEPPS 2212
+ IV YRGKDFLP A S+A+ +RR N+++ EN SS++ P E ++
Sbjct: 450 DVIVIYRGKDFLPAAASSAIQQRRNVLINKVKAEN------SSSVTVSPHSEAKDMAFLK 503
Query: 2211 VDQVLQRSDQERRK--LKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXX 2038
+++++ + K +K +KL + LA+
Sbjct: 504 DTEIIEKRIMTKAKAAIKRTSIKLSQALEKKAKAEKLLAILEKVESPQEQ---------- 553
Query: 2037 XXKPEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIIST 1858
E+D+EGIT+EERYML+R+G +MKP+L +GRRGVFDGT+ENMHLHWKYRELVKII
Sbjct: 554 ----EIDKEGITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIICN 609
Query: 1857 DRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQAL 1678
+E H+TA LEAESGGIL+AVER KG+AII+YRGKNY RP LRPRTLLNKKQAL
Sbjct: 610 QGSLESVHQTALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRPSCLRPRTLLNKKQAL 669
Query: 1677 KRSIEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGS-- 1504
KRSIEAQR E+LKLH+LK+ KNI LK Q+VKD +K + T R D + + GS
Sbjct: 670 KRSIEAQRREALKLHVLKLDKNINELKLQMVKDEASSKQIAET--LRSDLAIDKHGGSSN 727
Query: 1503 TLGNYSHQQTNEGSTEYSNDQ--EAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGA 1330
++ S ++ + + + +Q E +DG +S+S ++ +S K+ +
Sbjct: 728 SINCNSPKEASVHNQQAIEEQHIELIDGVSSNS--------LNCNSSKEASV-------- 771
Query: 1329 YSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIG--ASICKENLELDKTIDCCSKSGQ 1156
D + E E + S + E A +G +I ++ +EL T +
Sbjct: 772 ----DNQQQAIEEQHIELIDGASSNLISSPEEASVGNQRAIQEQYIELIDT-----GGAR 822
Query: 1155 KSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGH-IPGNKSIESSVKAGEDEFKSS 979
+ P+S+ + H DE E++++ D+ GH + NK++E+SV + + + + S
Sbjct: 823 QGEPESSAGLVHQERQLDE-ESDSVVDT--------GHCVSNNKAMEASVASLKSDPEPS 873
Query: 978 DHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVH 799
+ N S ++ P RS+ LSNR+RLLLR+QAL MKKRP+LA+GKSN +TG+AK IK H
Sbjct: 874 ---APVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDH 930
Query: 798 FEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKK 619
F KHP IV+VKGRAKGTS+ ELV KLE ATG+VLVSQEP+K+ILYRGWG +P
Sbjct: 931 FRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSKIILYRGWGAGTKPGT--- 987
Query: 618 KKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 517
+ + G D VSP+L++AIR+ECGL
Sbjct: 988 ---YLNDSKLGKDGGAKPTVSPELLEAIRIECGL 1018
Score = 63.9 bits (154), Expect = 5e-07
Identities = 35/114 (30%), Positives = 60/114 (52%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + +T E L ++G MK + +G+ G+ +G + +H W+ E+V+I+ D C
Sbjct: 146 PTLAELSLTDGEIMRLTKLGFEMKQKIKVGKAGITEGIVNGIHERWRRSEVVRIVCEDLC 205
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKK 1687
+ RT LE ++GG+++ R G II+YRG +Y P L + L + K
Sbjct: 206 RINMKRTHDILERKTGGLVV----WRSGSKIILYRGIDYKYPYFLSDKVLRDDK 255
>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X6 [Citrus sinensis]
Length = 1031
Score = 750 bits (1936), Expect = 0.0
Identities = 440/929 (47%), Positives = 550/929 (59%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CEDLCR NMKRTHD LERKTGGLVVWRSGS I+LYR
Sbjct: 204 AGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRTHDSLERKTGGLVVWRSGSKIILYR 263
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFLAD + T+ D D T G +SA PS
Sbjct: 264 GADYKYPYFLADESSTDGASSDDLPNQLVD----DEGLDETKTHSSGADSAKPS------ 313
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
SP + +++ VG P+K+R+QLPGE +LVEEAD LL+G
Sbjct: 314 -----------------GQSPTNKKVQQTLIHSVGSPDKLRYQLPGEAELVEEADRLLDG 356
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGYR+PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 357 LGPRFTDWWGYDPQPVDADLLSATVPGYRRPFRLLPYGVQPKLTNDEMTTLRRLGRPLPC 416
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLAA++VKLWEKCEIAKIAVKRG QNTNS+MMA+ELK LTGGTL++R
Sbjct: 417 HFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKRGAQNTNSEMMAQELKRLTGGTLLSRDR 476
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIVFYRGKDFLPPA S A++ERRK+ T N E + DE +
Sbjct: 477 EFIVFYRGKDFLPPAASCAIEERRKHEFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTND 536
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
E+++ +S EV +R T+ +S K A E
Sbjct: 537 QKSTMHSEQKERRSAEVAIRRTNIRLSRALEKKAEAEKLLAELEEETPEQY--------E 588
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
VD+EGIT+EERYML++VG RMK +L MGRRGVFDGT+ENMHLHWK+RELVKIIS R IE
Sbjct: 589 VDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIE 648
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
A + AR LE ESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K++A+KRS+E
Sbjct: 649 AALQEARTLEVESGGILVAVERVNKGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLE 708
Query: 1662 AQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNYSH 1483
AQR +SLKLH+L++++NIE LK Q+VKD + P + E +G+
Sbjct: 709 AQRRQSLKLHVLELTRNIEKLKLQLVKDKEANSLETIDESILPLVKEE------IGDMQP 762
Query: 1482 QQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPAE 1303
+ T + + +A +D T SN + IQ DK+ + + +
Sbjct: 763 AECMRSDTSHEVNVQARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESLTHN----- 817
Query: 1302 TEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSNLRVT 1123
G G S C +N CS + +S++
Sbjct: 818 ----------------------GVASGTSSCPDN-------SMCSSDNEPR--ESSIE-- 844
Query: 1122 HLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQNGSGV 943
S+ ENE + S + G + + + G +++ ++ N
Sbjct: 845 --SAKSRSSENEPIEQSFEL-------AKGRSGLSTPIGTGNVWNENNSRAIQLSN---- 891
Query: 942 KGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVK 763
RDRLLLRKQAL+MKKRPVLAVG+SN++TGVAK IK HFEK+PLAIV+VK
Sbjct: 892 -----------RDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVK 940
Query: 762 GRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGT 583
GRAKGTS+QE+V KLE+ATG+VLVSQEP+KVILYRGWG +E S ++ + ++
Sbjct: 941 GRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILYRGWGAEDESSPRGRQNSRAKPSIV-R 999
Query: 582 DDSTTEVVSPQLIKAIRLECGLDGSQENE 496
D VS +L+ AI+LECGL G QE E
Sbjct: 1000 DVRPWPAVSRELLAAIKLECGLQGQQEQE 1028
Score = 61.6 bits (148), Expect = 2e-06
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2007 ITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRT 1828
++ +E L+ +G ++ L +G+ G+ +G + +H W++ E+VKI+ D C + RT
Sbjct: 180 LSGKELRRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRHAEVVKIVCEDLCRLNMKRT 239
Query: 1827 ARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+LE ++GG+++ R G II+YRG +Y P
Sbjct: 240 HDSLERKTGGLVV----WRSGSKIILYRGADYKYP 270
>ref|XP_004297960.1| PREDICTED: uncharacterized protein LOC101297928 [Fragaria vesca
subsp. vesca]
Length = 1169
Score = 746 bits (1927), Expect = 0.0
Identities = 473/1042 (45%), Positives = 597/1042 (57%), Gaps = 111/1042 (10%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHE WRRSEVVK+ CEDLCR NMKRTHDLLERKTGGLVVWRSG+ I+LYR
Sbjct: 188 AGITEGIVNGIHENWRRSEVVKLVCEDLCRLNMKRTHDLLERKTGGLVVWRSGAKIILYR 247
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
GVNYKYPYFL DS D + + V VN+ N
Sbjct: 248 GVNYKYPYFLKGKK------------------REDSTSDDSGDAV--VNAGGTDEAN--- 284
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
S T PSP T ++++GVG+ N+ RFQLPGE +L EEAD +L G
Sbjct: 285 --------------SVTGPSPTDEKTQPALIQGVGLANRFRFQLPGEAELAEEADRMLEG 330
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRF DWWG PGYRKPFRLLPYG++PKLT DEMTT++RL+R LP
Sbjct: 331 LGPRFNDWWGYEPLPVDGDLLPAVVPGYRKPFRLLPYGLQPKLTDDEMTTIRRLARPLPT 390
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNR LQGLA S+VKLWEKCEIAK+AVKRGVQNTN ++MAEELK LTGGTLIAR
Sbjct: 391 HFALGRNRKLQGLATSIVKLWEKCEIAKVAVKRGVQNTNCELMAEELKRLTGGTLIARDK 450
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIV YRGKDFLPPAVS+A++ERRK + +N + + + E R +
Sbjct: 451 EFIVLYRGKDFLPPAVSSAIEERRKAVMYADN-RSRKLRISATTAQDHESRTE------- 502
Query: 2202 VLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPE 2023
L+ D L S++ KL+ST S + KL++ +PE
Sbjct: 503 -LETKDDLTGGLPSEKRKLKSTEAAASRASIKLSMALEKREKAEKLLAELEKAESPQQPE 561
Query: 2022 VDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIE 1843
+D+EGIT+EERYML++VG +MKP+L MGRRGVFDGTIENMHLHWKYRELVKII ++ IE
Sbjct: 562 IDKEGITEEERYMLRKVGLKMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIE 621
Query: 1842 DAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIE 1663
AH+ A+ LE+ESGGIL+AVER KGYAII+YRGKNY+RP +LRP+TLL K++ALKRSIE
Sbjct: 622 SAHQVAQTLESESGGILVAVERVSKGYAIIVYRGKNYIRPANLRPQTLLTKREALKRSIE 681
Query: 1662 AQRSESLKLHIL----------------KVSKNI-------------------------E 1606
AQR ESLKLH+L K S N+ E
Sbjct: 682 AQRRESLKLHVLKLNKNIDELEELVVKGKDSNNMHPVNESKELVREEVNNVESEECMHEE 741
Query: 1605 HLKRQ------------------VVKDGLETKSV----LSTDCERPDT---ESETYDGST 1501
+LK + VVK L T+ LS+ C+ +T ES + +GS
Sbjct: 742 NLKARGKQESHVTNMNLNDGMVAVVKGHLATQQGEGYGLSSSCDGEETDEVESRSSNGSV 801
Query: 1500 L-----GNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRI 1336
+++ + G + D++ +DG +D+ L GMS Q Q K I
Sbjct: 802 TIESQENLFNNVKGEVGILNKARDKQELDGIDADADLFD---GMSPVINGQLATQQGKEI 858
Query: 1335 G---AYSQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASI-CKEN----------- 1201
AY + D P + E S ESV + + + + G I ++N
Sbjct: 859 TFSLAYDE-DGPGKVESVSSDESVTSKTQVDLFEDIKEEAGVFINARDNQDSQVTQMDLN 917
Query: 1200 ------------LELDKTID---CCSKSGQKSSPDSNLRV-THLSSFPD---EVENEALN 1078
+ DK I C K P S++ + ++ + F D EVE
Sbjct: 918 VGTGAVVNSQLATQQDKEIFSFICDENESGKVDPGSSVTIDSNATFFKDRNREVEGYVCR 977
Query: 1077 DSLDFPTNLLGHIPGNK------SIESSVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTL 916
+ + I N+ +ESS ++G + KS M + + P R+V L
Sbjct: 978 EDVMSKGPSSSAILDNQHRVFDYELESSGRSGNTKSKSPV--PTMVRKTLNEMPSRAVHL 1035
Query: 915 SNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQ 736
SN +RLLLRKQALKMKKRPVLAVG++N++TGVAK IK HFE++PLAIV+VKGRAKGTS++
Sbjct: 1036 SNSERLLLRKQALKMKKRPVLAVGRNNIVTGVAKAIKAHFERYPLAIVNVKGRAKGTSVR 1095
Query: 735 ELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVS 556
E+VFKLE+ATG+VLVSQEP+KVILYRGWG + P KK T VS
Sbjct: 1096 EIVFKLEQATGAVLVSQEPSKVILYRGWGAGDSPGNNDKK---------NTIGKKVAPVS 1146
Query: 555 PQLIKAIRLECGLDGSQENEVT 490
P+L+ AIRLECGL ++ + T
Sbjct: 1147 PELLAAIRLECGLQNHEKEDAT 1168
Score = 63.5 bits (153), Expect = 6e-07
Identities = 33/106 (31%), Positives = 58/106 (54%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + ++ E L+ VG +K + +G+ G+ +G + +H +W+ E+VK++ D C
Sbjct: 157 PTLAEMSLSTAELRRLRTVGIELKKKVRVGKAGITEGIVNGIHENWRRSEVVKLVCEDLC 216
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLR 1711
+ RT LE ++GG+++ R G II+YRG NY P L+
Sbjct: 217 RLNMKRTHDLLERKTGGLVV----WRSGAKIILYRGVNYKYPYFLK 258
>ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1049
Score = 737 bits (1903), Expect = 0.0
Identities = 431/941 (45%), Positives = 579/941 (61%), Gaps = 11/941 (1%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWRR E+VKI CED+CR NMKRTH+LLE+KTGGLV+WRSGS I+LYR
Sbjct: 197 AGITEGIVNGIHERWRRMELVKITCEDICRLNMKRTHELLEKKTGGLVIWRSGSNIILYR 256
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYF ++ + N +SA+D+T + G
Sbjct: 257 GADYKYPYF-SEISFEN-----------------NSAQDATPDLFMGTEE---------- 288
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
+ N P R + +++GVG P++VRF+LPGE + EEAD LL G
Sbjct: 289 ------HMTNSSGTDVVKPDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEG 342
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGY++PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 343 LGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPC 402
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
F LGRNR LQGLAA++VKLWEKCEIAK+AVKRGVQNTNS++MAEELK LTGGTL++R
Sbjct: 403 HFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDR 462
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTE--NGETTEQSSNLDKIPKFEPRNDEPPSV 2209
EFIVFYRGKDFLP AVS+A++ERRK + E NG + ++ ++ +
Sbjct: 463 EFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHA 522
Query: 2208 DQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXK 2029
+ Q+ QE++KL S E ++ T+ +KL +
Sbjct: 523 RRNNQKGVQEKKKLTSMEAAIKRTA-------DKLTTALEKKAEAENLLLELEEDEVPQQ 575
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
++D+EGIT+EER+ML+++G RMKP+L +GRRGVFDGT+ENMHLHWKYRELVK+I+ +
Sbjct: 576 SDMDKEGITEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKT 635
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRS 1669
IE+ H+ AR LEAESGGIL+AVE KG+AII+YRGKNY RP LRP+TLL+K++A+KRS
Sbjct: 636 IEEVHQIARMLEAESGGILVAVELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAMKRS 695
Query: 1668 IEAQRSESLKLHILKVSKNIEHLKRQVVK--DGLETKSVLSTDCERPDTESETYDGSTLG 1495
IEAQR +SLKLH+LK+++NIE L+ ++ K + + +S D + P T G T
Sbjct: 696 IEAQRRQSLKLHVLKLTQNIEALQSRLAKNEEMVHIQSPDIVDRQVPVTGISDAAGGT-- 753
Query: 1494 NYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQP----DKRIGAY 1327
++Q ++ TE S D +S L + +S ++ I P + ++ A
Sbjct: 754 --NYQSSSASPTEDSGDAAEDTDPSSQKELSSDSSDTDHNSQQEFPIDPFFQYEGKVEAV 811
Query: 1326 SQSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSS 1147
+ +P EH+ S S+ + + V+ G+++ S+S KSS
Sbjct: 812 GDTIQP---EHQ-SISSIKESKSMFNVNVDQKTFGSAV--------------SESVSKSS 853
Query: 1146 -PDSNLRVTHLSSF--PDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSD 976
+ + + SF P EV+++ + +P K + +S+
Sbjct: 854 RGEVKIHFSETRSFNKPREVDDK----------KEVSQLPSVKP--------QQALRSTR 895
Query: 975 HRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHF 796
R E P R V LSNR+RLLLRKQALKMKK+PVLAVG+SN++TGVAK IK HF
Sbjct: 896 SRSEGM-------PTRKVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHF 948
Query: 795 EKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKK 616
+K+PLAIV+VKGRAKGTS++E+VFKLE+ATG+VLVSQEP+KVILYRGWG E +
Sbjct: 949 KKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGERGAS--N 1006
Query: 615 KRNVRSALTGTDDSTTEVVSPQLIKAIRLECGLDGSQENEV 493
+ R++ + +SP+LI AIRLECGL + + EV
Sbjct: 1007 GNDTRNSRNSREQKELMSISPELISAIRLECGLQSNHDMEV 1047
Score = 62.4 bits (150), Expect = 1e-06
Identities = 35/102 (34%), Positives = 54/102 (52%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + + EE L+ VG ++ L +G+ G+ +G + +H W+ ELVKI D C
Sbjct: 166 PSLAELTLPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRMELVKITCEDIC 225
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+ RT LE ++GG++I R G II+YRG +Y P
Sbjct: 226 RLNMKRTHELLEKKTGGLVI----WRSGSNIILYRGADYKYP 263
>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
gi|508710384|gb|EOY02281.1| CRM family member 2, putative
isoform 1 [Theobroma cacao]
Length = 1087
Score = 733 bits (1893), Expect = 0.0
Identities = 448/993 (45%), Positives = 581/993 (58%), Gaps = 62/993 (6%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLE------------------- 3160
AGITEGIVNGIHERWRRSEVVKI CED+C+ NMKRTH++LE
Sbjct: 190 AGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLEVCSLIWLFSLLLELFFFIA 249
Query: 3159 -----------------------RKTGGLVVWRSGSIIVLYRGVNYKYPYFLADANITNX 3049
RKTGGLVVWRSGS I+LYRG NY+YPYFLAD T+
Sbjct: 250 LSMIDEEMRLIKVGLWLKKKLQMRKTGGLVVWRSGSKIILYRGANYRYPYFLADKIATD- 308
Query: 3048 XXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMAHSSAYPSLVNGMAHSSTS 2869
D ++ASP T S + + + T+
Sbjct: 309 ---------------------------DTSSNASPDTNMDNVELHETESCSSEINSAKTA 341
Query: 2868 -PSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNGLGPRFTDWWGXXXXXXX 2692
P+ +MT +V+GVG P++VRFQLPGE +LVEEA+HLL+GLGPRFTDWWG
Sbjct: 342 IPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVD 401
Query: 2691 XXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPYQFALGRNRNLQGLAASM 2512
PGYR+PFRLLPYG++P LT+DEMTTL+RL R LP F LGRNR LQGLAAS+
Sbjct: 402 GDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASI 461
Query: 2511 VKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAGEFIVFYRGKDFLPPAVS 2332
VK WEKCEIAK+AVKRGVQNTNS++MAEELK LTGGTL++R +FIV YRGKDFLP AVS
Sbjct: 462 VKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVS 521
Query: 2331 TAMDERRKN--RLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQVL-QRSD--QERRKL 2167
+A++ERR++ ++ + E ++ ++ + ++ ++ QRS+ + + +
Sbjct: 522 SAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNM 581
Query: 2166 KSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXKPEVDREGITKEERY 1987
KS E +R T + KL++ + E+D+EGIT+EERY
Sbjct: 582 KSAEAAIRKT-------DVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERY 634
Query: 1986 MLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAE 1807
ML++VG RMKP+L +GRRGVFDGT+ENMHLHWKYRELVKIIS + +E H+ AR LEAE
Sbjct: 635 MLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAE 694
Query: 1806 SGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRSIEAQRSESLKLHIL 1627
SGGIL+AVER KGYAII+YRGKNY RP LRP+TLL K+QA+KRS+E QR +SLKLHIL
Sbjct: 695 SGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHIL 754
Query: 1626 KVSKNIEHLKRQVVKD-------GLETKSVLSTDCERPDTESETYDGSTLGNYSHQQTNE 1468
+++N+ L+ Q+V D +E S+ E +S Y GS + E
Sbjct: 755 NLTRNVNDLEHQLVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVI---------E 805
Query: 1467 GSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDKPAETEHEF 1288
E+ D S+ST + ++ ++ S +Q Q + + +TE EF
Sbjct: 806 CPASSGGHVESRDKDGSESTSMKNDKMVATISIRQPSKQEFMEPSSIHDGFENHKTESEF 865
Query: 1287 SSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSNLRVTHL--- 1117
S+ESV + S + LR H
Sbjct: 866 SAESV--------------------------------------NRKSHATELRALHTQVE 887
Query: 1116 ---SSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVK-AGEDEFKSSDHRDEMQNGS 949
+S+PD + E ++DS N + N +ES V+ A + S + + N
Sbjct: 888 MVDTSYPDNLMEE-IDDS--GAINAEHGVSNNGPMESLVESASMLDVSISSAVENVSN-- 942
Query: 948 GVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIVD 769
K + LSN+DRLLLRKQALKMKKRPVLAVG+SN++TGVAK I+ HF+KHPLAIV+
Sbjct: 943 --KMASTANFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVN 1000
Query: 768 VKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSALT 589
VKGRAKGTS+QE+V KL++ATG+VLVSQEP+KVILYRGWG +E + + RN + +L
Sbjct: 1001 VKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAGDE--LGRGDNRNAKDSLA 1058
Query: 588 GTDDSTTEVVSPQLIKAIRLECGLDGSQENEVT 490
VSP+LI AIRLECGL QE E T
Sbjct: 1059 ----QNRPAVSPELIAAIRLECGLQLQQEEEAT 1087
>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Glycine max]
Length = 1027
Score = 733 bits (1893), Expect = 0.0
Identities = 438/946 (46%), Positives = 572/946 (60%), Gaps = 24/946 (2%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AG+TEGIVNGIHERWR EVV+I CEDL R+NMKRTHDLLERKTGGLVVWRSGS I+LYR
Sbjct: 154 AGLTEGIVNGIHERWRSFEVVRIVCEDLSRFNMKRTHDLLERKTGGLVVWRSGSKIILYR 213
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYFL+D S D+T + + ++ + + +
Sbjct: 214 GTDYKYPYFLSDKV---------------------SRDDNTGDAMQHMDEDAKNFDKRES 252
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
HSS N + ++ S + T ++++GVG PNKVRFQLPGE +L ++AD LL G
Sbjct: 253 HSSEK----NSVTYAGKSSNVKT--AKPALIQGVGSPNKVRFQLPGEAELAKDADSLLTG 306
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
+GPRF DWWG PGYRKPFRLLPYG++PKLT DEMTT++RL +HLP
Sbjct: 307 IGPRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGKHLPC 366
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRN+ L GLAA+++KLWE+CEI KIA+KRGV NTN ++MAEE+K LTGGTLIAR
Sbjct: 367 HFALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTNGELMAEEIKYLTGGTLIARDK 426
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRK---NRLQTENGETTEQSSNLDKIPKFEPRNDEPPS 2212
EFIVFYRGKDFLP AVS+A+++RR +L+T N + D+P
Sbjct: 427 EFIVFYRGKDFLPTAVSSAIEQRRSIGMYKLKTRNSLSV---------------TDDPDL 471
Query: 2211 VDQVLQRSDQERR---KLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXX 2041
D ++ + + K +K+ L + S + KL++
Sbjct: 472 KDGTIECDSEVKGMNFKKDTKQGMLTEAEAAIKSTSIKLSMALEEKAKAEKLLSELENAE 531
Query: 2040 XXXKPEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKII- 1864
+ E+++EGIT+EE+YML+R+G +M P+L +GRRGVFDGT+ENMHLHWKYRELVKII
Sbjct: 532 SPQEEEINKEGITEEEKYMLRRIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIIC 591
Query: 1863 STDRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQ 1684
+ +ED + A+ LEAESGGILIAVER K YAII+YRGKNY RP LRPRTLLNKKQ
Sbjct: 592 NKQMSLEDVQQIAQTLEAESGGILIAVERVNKSYAIIVYRGKNYSRPASLRPRTLLNKKQ 651
Query: 1683 ALKRSIEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTES--ETYD 1510
ALKRSIEAQR ESLKLH+LK+ +NI LK Q+ KD S D ++ E E D
Sbjct: 652 ALKRSIEAQRCESLKLHVLKLDRNINELKHQMAKDMEANSKQTSVDNQQAIQEQPVELID 711
Query: 1509 GSTLGNYSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQ--PDKRI 1336
+HQ S ++ +EA Y T+ + + D G +Q P I
Sbjct: 712 SGG----AHQAEPGNSINWNYPKEASVDY--QQTMQEQSVELFDGG---GAVQSEPQNSI 762
Query: 1335 GAYSQSDKPAETEHEFSSESV------------PKGSVLITYPVEGAQIGASICKENLEL 1192
S + + + +S P+ S+ P E AS+ +
Sbjct: 763 NWNSPKEASVDNQQAIQGQSFELIDRSEAHHGEPENSIDWNSPEE-----ASVDNQQAIQ 817
Query: 1191 DKTIDCCSKSG-QKSSPDSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIES 1015
+ ++ G + P+S P E + + +DS+ + + +K +ES
Sbjct: 818 GQPVELIDGGGAHQDEPES-----WSGLIPKETKLDRDSDSV---VDTQHCVSISKVMES 869
Query: 1014 SVKAGEDEFKSSDHRDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSN 835
S+ A E + D +++ S + P RSV LSNR+RLLLRKQALKMKKRPVL+VGKSN
Sbjct: 870 SIVASESD---PDLSALVRDMSSNELPSRSVYLSNRERLLLRKQALKMKKRPVLSVGKSN 926
Query: 834 LITGVAKTIKVHFEKHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRG 655
++TG+AK IK HF+KHPLAIV+VKGRAKGTSIQE+V KLE+ TG+VLVSQE NKVILYRG
Sbjct: 927 IVTGLAKAIKAHFQKHPLAIVNVKGRAKGTSIQEVVSKLEQETGAVLVSQELNKVILYRG 986
Query: 654 WGEAEEPSVTKKKKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 517
WGE E+PS + G + + VSP+L++AIR+ECGL
Sbjct: 987 WGEGEKPSTA------INFDKVGKEVAAKPGVSPELLEAIRVECGL 1026
>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 730 bits (1884), Expect = 0.0
Identities = 439/926 (47%), Positives = 562/926 (60%), Gaps = 4/926 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVN IHE WRRSEVVKI CEDLCR NMKRTHDLLERKTGG+VVWRSGS I+LYR
Sbjct: 188 AGITEGIVNTIHEYWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYR 247
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G NY YPYF I D +S +ST+ C++ SA P++
Sbjct: 248 GPNYIYPYF--SHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERSAGPTS----- 300
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
S PSP ++++GVG PN+VRFQLPGE +L E+A+ LL G
Sbjct: 301 --------------SVKMPSP-------TLIQGVGAPNRVRFQLPGEAELAEDAESLLEG 339
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRF+DWWG PGYRKPFRLLPYG++PKLT+DEMT+L+RL+R LP
Sbjct: 340 LGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPC 399
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNR LQGLAAS+++LWEKCEIAKIAVKRGVQNTN+K+MAEEL+LLTGGTL++R
Sbjct: 400 HFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDR 459
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIV YRGKDFLP AVS+AM+++R RL E +T + + K E + P + Q
Sbjct: 460 EFIVLYRGKDFLPFAVSSAMEQKRHMRLH-EMKQTDNSPATTGQGLKLEINENGPTNESQ 518
Query: 2202 VL---QRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXX 2032
+ ++ ERRKL S E +R TS KL++
Sbjct: 519 SITGWKKIVSERRKLMSSETSMRKTS-------IKLSIALEKKAKAEEFLAKLEEEEKLQ 571
Query: 2031 KPEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDR 1852
+PE+D+EGIT EERYMLK+VG RMKP+L +GRRGVFDGT+ENMHLHWKYRELVKII+ +R
Sbjct: 572 QPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNER 631
Query: 1851 CIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKR 1672
+ H AR LEAESGGIL+AVER ++ +AIII+RGKNY RP LRP +LLNKK+ALKR
Sbjct: 632 SFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKR 691
Query: 1671 SIEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGN 1492
SIEAQR +SLKLH+LK+++N+E LK ++ +D K + + + T + +G
Sbjct: 692 SIEAQRRKSLKLHVLKLTQNVEELKLKLDED----KRAIGMESIKTSTFQQGKEG----- 742
Query: 1491 YSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQG-GIQPDKRIGAYSQSD 1315
QT GS + D + +A +ST L N + K+G G I + +
Sbjct: 743 IDEIQTT-GSLKLVADSACLT-HAENSTCLEEN---EVAKVKKGHGTHSSGTICLDTSVN 797
Query: 1314 KPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSN 1135
+ T F + + + + E + G + K D+N
Sbjct: 798 RLQTTNDVFLIHNGDQSNATVRPSFESVRQG-------------------NHAKVPMDTN 838
Query: 1134 LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQN 955
+ P N +S ++ + H+ NK + SV+ E+ KS +
Sbjct: 839 AEFGTIE--PQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEE--KSPPLLSSTRI 894
Query: 954 GSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAI 775
P LSN++RLLLR+QALKMKK PVL+VGKSN+ITGVAK IK HF+KH LAI
Sbjct: 895 NQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAI 954
Query: 774 VDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSA 595
V+VKGRAKGTS+QE+VFKLE+ATG+VLVSQEP+KVILYRGW E + K +
Sbjct: 955 VNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEEEDRKQKATMMKNSGEDR 1014
Query: 594 LTGTDDSTTEVVSPQLIKAIRLECGL 517
L+ +S +L+ AIR+ECGL
Sbjct: 1015 LS---------MSSELMAAIRIECGL 1031
Score = 71.2 bits (173), Expect = 3e-09
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + +T+EE L+ +G R+K L +G+ G+ +G + +H +W+ E+VKI D C
Sbjct: 157 PSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACEDLC 216
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+ RT LE ++GGI++ R G II+YRG NY+ P
Sbjct: 217 RLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 254
>ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1|
unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis
thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2
[Arabidopsis thaliana]
Length = 1011
Score = 726 bits (1874), Expect = 0.0
Identities = 436/934 (46%), Positives = 561/934 (60%), Gaps = 12/934 (1%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CED+ R NMKRTHD+LE KTGGLV+WRSGS I+LYR
Sbjct: 190 AGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYR 249
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
GVNY+YPYF++D ++ + E G +S V+
Sbjct: 250 GVNYQYPYFVSDRDLAH-------------------------EAASGASSMDQGVVDSRE 284
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
S S++PS +M + +GVG P+KVRFQLPGEVQLVEEAD LL G
Sbjct: 285 KQSIA---------ESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEG 335
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWW P YR+PFRLLPYG+ PKLT DEMTT++RL R LP
Sbjct: 336 LGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPC 395
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLA ++VKLWEKCE+AKIAVKRGVQNTNS++MAEELK LTGGTLI+R
Sbjct: 396 HFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDK 455
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGET--TEQSSNLDKI-PKFEPRNDEPPS 2212
+FIV YRGKDFLP AVS+A++ERR+ + EN + + N ++I P+ + E +
Sbjct: 456 DFIVLYRGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEA 515
Query: 2211 VDQV--LQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXX 2038
DQ +Q + R+ S E L TS KL++
Sbjct: 516 KDQKDHIQTHQMKSRQRNSPEAILEKTSM-------KLSMALEKKANAEKVLADLENRES 568
Query: 2037 XXKPEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIIST 1858
++D+EGIT +E+YML+++G +MKP+L +GRRGVFDGTIENMHLHWKYRELVKII
Sbjct: 569 PQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICN 628
Query: 1857 DRCIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQAL 1678
+ IE AH+ A LEAESGGIL+AVE KGYAII+YRGKNY RP LRP+TLL+K++AL
Sbjct: 629 EYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREAL 688
Query: 1677 KRSIEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTL 1498
KRS+EAQR +SLKLH+LK+S NIE L RQ+V+D T DG +
Sbjct: 689 KRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSA--------------TNETWSDGESS 734
Query: 1497 GNYSHQQTNEGSTEYSNDQEAVD-GYASDSTLLHS-NPGMSDSSCKQGGIQPDKRIGAYS 1324
++T TE +E ++ GY+SD ++ S D S +G + P +
Sbjct: 735 NMMVEEETENQHTEPEKAREKIELGYSSDLSVPSSGEENWEDDS--EGEVDP-----LTT 787
Query: 1323 QSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSP 1144
S + E E E +S +G+ +L+ + +++G
Sbjct: 788 SSQEYQEDESESASSQRHEGN-------------------SLDSTANLSVFAETG----- 823
Query: 1143 DSNLRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDE 964
+N H S P N LN + P G G+ S S++ R+
Sbjct: 824 SANASSFHDRSLP---HNSFLNANRKLP----GSSTGSGSQISAL------------RER 864
Query: 963 MQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHP 784
G+ LSNR+RL+LRKQALKMKKRP AVG+SN++TG+A+T+K+HF+K+P
Sbjct: 865 KSENDGL-----VTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNP 919
Query: 783 LAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEE-----PSVTKK 619
LAIV+VKGRA GTS+QE++ KL++ TG++LVSQEP+KVILYRGWG EE P+ K
Sbjct: 920 LAIVNVKGRANGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNNNVK 979
Query: 618 KKRNVRSALTGTDDSTTEVVSPQLIKAIRLECGL 517
N+ S + DD VSP LI+AIRLECGL
Sbjct: 980 SSINLPSTRSFVDDPPH--VSPALIEAIRLECGL 1011
Score = 60.1 bits (144), Expect = 7e-06
Identities = 33/98 (33%), Positives = 53/98 (54%)
Frame = -1
Query: 1983 LKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRCIEDAHRTARALEAES 1804
L+ VG R+ L +G+ G+ +G + +H W+ E+VKI D + RT LE ++
Sbjct: 174 LRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKT 233
Query: 1803 GGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNK 1690
GG++I R G I++YRG NY P + R L ++
Sbjct: 234 GGLVI----WRSGSKILLYRGVNYQYPYFVSDRDLAHE 267
>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 726 bits (1873), Expect = 0.0
Identities = 439/926 (47%), Positives = 561/926 (60%), Gaps = 4/926 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVN IHE WRRSEVVKI CEDLCR NMKRTHDLLERKTGG+VVWRSGS I+LYR
Sbjct: 208 AGITEGIVNTIHEFWRRSEVVKIACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYR 267
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G NY YPYF I D +S +ST+ C++ SA P++ M
Sbjct: 268 GPNYIYPYF--SHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERSAGPTSYVKM- 324
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
PSP ++++GVG PN+VRFQLPGE +L E+A+ LL G
Sbjct: 325 ------------------PSP-------TLIQGVGAPNRVRFQLPGEAELAEDAESLLEG 359
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRF+DWWG PGYRKPFRLLPYG++PKLT+DEMT+L+RL+R LP
Sbjct: 360 LGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTSLRRLARPLPC 419
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNR LQGLAAS+++LWEKCEIAKIAVKRGVQNTN+K+MAEEL+LLTGGTL++R
Sbjct: 420 HFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLLTGGTLLSRDR 479
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGETTEQSSNLDKIPKFEPRNDEPPSVDQ 2203
EFIV YRGKDFLP AVS+AM+++R RL E +T + + K E + P + Q
Sbjct: 480 EFIVLYRGKDFLPFAVSSAMEQKRHMRLH-EMKQTDNSPATTGQGLKLEINENGPTNESQ 538
Query: 2202 VL---QRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXX 2032
+ ++ ERRKL S E +R TS +S V
Sbjct: 539 SITGWKKIVSERRKLMSSETSMRKTSIKLS------IVCIRKKAKAEEFLAKLEEEEKLQ 592
Query: 2031 KPEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDR 1852
+PE+D+EGIT EERYMLK+VG RMKP+L +GRRGVFDGT+ENMHLHWKYRELVKII+ +R
Sbjct: 593 QPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIITNER 652
Query: 1851 CIEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKR 1672
+ H AR LEAESGGIL+AVER ++ +AIII+RGKNY RP LRP +LLNKK+ALKR
Sbjct: 653 SFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRPSRLRPESLLNKKEALKR 712
Query: 1671 SIEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGN 1492
SIEAQR +SLKLH+LK+++N+E LK ++ +D K + + ++ T+ G
Sbjct: 713 SIEAQRRKSLKLHVLKLTQNVEELKLKLDED----KRAIGME----SIKTSTFQPGKEGI 764
Query: 1491 YSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQG-GIQPDKRIGAYSQSD 1315
Q T GS + D + +A +ST L N + K+G G I + +
Sbjct: 765 DEIQTT--GSLKLVADSACLT-HAENSTCLEEN---EVAKVKKGHGTHSSGTICLDTSVN 818
Query: 1314 KPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSN 1135
+ T F + + + + E + G + K D+N
Sbjct: 819 RLQTTNDVFLIHNGDQSNATVRPSFESVRQG-------------------NHAKVPMDTN 859
Query: 1134 LRVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQN 955
+ P N +S ++ + H+ NK + SV+ E+ KS +
Sbjct: 860 AEFGTIE--PQSGANSLSGESNSGTSDAVHHVAMNKDTKPSVRLEEE--KSPPLLSSTRI 915
Query: 954 GSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAI 775
P LSN++RLLLR+QALKMKK PVL+VGKSN+ITGVAK IK HF+KH LAI
Sbjct: 916 NQPGYFPANVPQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKAIKEHFKKHSLAI 975
Query: 774 VDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKKRNVRSA 595
V+VKGRAKGTS+QE+VFKLE+ATG+VLVSQEP+KVILYRGW E + K +
Sbjct: 976 VNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEEEDRKQKATMMKNSGEDR 1035
Query: 594 LTGTDDSTTEVVSPQLIKAIRLECGL 517
L+ +S +L+ AIR+ECGL
Sbjct: 1036 LS---------MSSELMAAIRIECGL 1052
Score = 70.1 bits (170), Expect = 6e-09
Identities = 37/102 (36%), Positives = 58/102 (56%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + +T+EE L+ +G R+K L +G+ G+ +G + +H W+ E+VKI D C
Sbjct: 177 PSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVKIACEDLC 236
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+ RT LE ++GGI++ R G II+YRG NY+ P
Sbjct: 237 RLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 274
>ref|XP_006296749.1| hypothetical protein CARUB_v10015149mg [Capsella rubella]
gi|482565458|gb|EOA29647.1| hypothetical protein
CARUB_v10015149mg [Capsella rubella]
Length = 1021
Score = 724 bits (1869), Expect = 0.0
Identities = 438/930 (47%), Positives = 561/930 (60%), Gaps = 8/930 (0%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWR +EVVKI CED+ R NMKRTHD+LE KTGGLV+WRSGS I+LYR
Sbjct: 193 AGITEGIVNGIHERWRTTEVVKIVCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYR 252
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
GVNY+YPYF++D D DS+VE G +S V+
Sbjct: 253 GVNYQYPYFVSDR---------------------DLGHDSSVETASGGSSMDQEVVDSRD 291
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
S S+S S ++ +++GVG P+KVRFQLPGEVQLVEEAD LL G
Sbjct: 292 KQSTA---------ESSSLSVTSKTVKPLLIQGVGSPDKVRFQLPGEVQLVEEADQLLEG 342
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWW P YR+PFRLLPYG+ PKLT DEMTT++RL R LP
Sbjct: 343 LGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPC 402
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
FALGRNRNLQGLA ++VKLWEKCE+AKIAVKRGVQNTNS++MAEELK LTGGTLI+R
Sbjct: 403 HFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDK 462
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTENGET--TEQSSNLDKIPKFEPRNDEPPSV 2209
+FIV YRGKDFLP AVS+A++ERR+ + EN + + N D I K + D+
Sbjct: 463 DFIVLYRGKDFLPFAVSSAIEERRRQTMIMENSSAHGNKMTKNEDVI-KPQAATDDTELE 521
Query: 2208 DQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXK 2029
+ ++ + +KS++ K S I+ + KL++ +
Sbjct: 522 EAEYKKDHVQTHHMKSRQRK--SPEAILEKTSIKLSMALEKKANAEKILAELESRESPQQ 579
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
+D+EGIT +E+YML+++G +MKP+L +GRRGVFDGTIENMHLHWKYRELVKII +
Sbjct: 580 SNIDKEGITDDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEHS 639
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRS 1669
IE AH A LEAESGGIL+AVE KGYAII+YRGKNY RP LRP+TLL+K++ALKRS
Sbjct: 640 IEAAHEVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPSCLRPQTLLSKREALKRS 699
Query: 1668 IEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTDCERPDTESETYDGSTLGNY 1489
+EAQR +SLKLH+LK+S NI+ L RQ+V+D + T+ R D ES
Sbjct: 700 VEAQRRKSLKLHVLKLSNNIDELNRQLVEDSV-------TNETRSDGESSM--------R 744
Query: 1488 SHQQTNEGSTEYSNDQEAVD-GYASDSTLLHSNPGMSDSSCKQGGIQPDKRIGAYSQSDK 1312
++T E N E ++ GY+S+ +S SS + + D + D
Sbjct: 745 MVEETENQLIEPENSSEEIELGYSSE---------LSVSSSGEENWEDDNE----GEVDS 791
Query: 1311 PAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSSPDSNL 1132
+ HE + + G S E LD T + S+ S+
Sbjct: 792 FTTSSHEHQED----------------EPGLSQRHEGNALDSTANISVLVETGSAKASSF 835
Query: 1131 RVTHLSSFPDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDHRDEMQNG 952
H S P + L+ P LG G+ S S++ E KS
Sbjct: 836 ---HDRSMP---QKSFLHTERKVPKQELGSSTGSGSRVSAL----TERKS---------- 875
Query: 951 SGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFEKHPLAIV 772
K LSNR+RL+LRKQALKMKKRP AVG+SN++TG+A+T+K+HF+K+PLAIV
Sbjct: 876 ---KNDGLVADLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIV 932
Query: 771 DVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEE-----PSVTKKKKRN 607
+VKGRA+GTS+QE++ KL++ TG++LVSQEP+KVILYRGWG EE P+ K N
Sbjct: 933 NVKGRAEGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNSNVKNSIN 992
Query: 606 VRSALTGTDDSTTEVVSPQLIKAIRLECGL 517
+ S+ + DD VSP LI+AIRLECGL
Sbjct: 993 LTSSKSFVDDPPP--VSPALIEAIRLECGL 1020
>ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Solanum lycopersicum]
Length = 1049
Score = 724 bits (1869), Expect = 0.0
Identities = 435/949 (45%), Positives = 576/949 (60%), Gaps = 19/949 (2%)
Frame = -1
Query: 3282 AGITEGIVNGIHERWRRSEVVKIRCEDLCRWNMKRTHDLLERKTGGLVVWRSGSIIVLYR 3103
AGITEGIVNGIHERWRR E+VKI CED+CR NMKRTH+LLE+KTGGLV+WRSGS I+LYR
Sbjct: 197 AGITEGIVNGIHERWRRIELVKITCEDICRLNMKRTHELLEKKTGGLVIWRSGSNIILYR 256
Query: 3102 GVNYKYPYFLADANITNXXXXXXXXXXXXXDCAVDSAKDSTVECVDGVNSASPSTVNGMA 2923
G +YKYPYF ++ N SA+D+ + G M
Sbjct: 257 GADYKYPYFSENSFENN------------------SAQDANPDLFMGAE-------EHMT 291
Query: 2922 HSSAYPSLVNGMAHSSTSPSPVTRMTHSSMVRGVGMPNKVRFQLPGEVQLVEEADHLLNG 2743
+SS ++ + + + P +++GVG P++VRF+LPGE + EEAD LL G
Sbjct: 292 NSSGIDAVKSDASDRKSPP---------RVIQGVGSPDRVRFELPGEAEHTEEADKLLEG 342
Query: 2742 LGPRFTDWWGXXXXXXXXXXXXXXXPGYRKPFRLLPYGIRPKLTSDEMTTLKRLSRHLPY 2563
LGPRFTDWWG PGY++PFRLLPYG++PKLT+DEMTTL+RL R LP
Sbjct: 343 LGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPC 402
Query: 2562 QFALGRNRNLQGLAASMVKLWEKCEIAKIAVKRGVQNTNSKMMAEELKLLTGGTLIARAG 2383
F LGRNR LQGLAA++VKLWEKCEIAK+AVKRGVQNTNS++M EELK LTGGTL++R
Sbjct: 403 HFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDR 462
Query: 2382 EFIVFYRGKDFLPPAVSTAMDERRKNRLQTE--NGETTEQSSNLDKIPKFEPRNDEPPSV 2209
EFIVFYRGKDFLP AVS+A++ERRK + E NG + ++ ++ +
Sbjct: 463 EFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHA 522
Query: 2208 DQVLQRSDQERRKLKSKEVKLRSTSRIVSSINNKLAVXXXXXXXXXXXXXXXXXXXXXXK 2029
+ Q+ QE++KL S E ++ T+ +KL +
Sbjct: 523 HRNNQKGVQEKKKLTSMEAAIKRTA-------DKLTTALEKKAEAEKLLLELEEDEVPQQ 575
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
++D+EGIT+EER+ML+++G RMKP+L +GRRGVFDGT+ENMHLHWKYRELVK+I+ +
Sbjct: 576 SDMDKEGITEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKN 635
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRPVDLRPRTLLNKKQALKRS 1669
IE+ H+ AR LEAESGGIL+AVER KGYAII+YRGKNY RP LRP+TLL+K++A+KRS
Sbjct: 636 IEEVHQIARMLEAESGGILVAVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRS 695
Query: 1668 IEAQRSESLKLHILKVSKNIEHLKRQVVKDGLETKSVLSTD-CERPDTESETYDGSTLGN 1492
IEAQR +SLKLH+LK+++NIE L+ ++ K+ E + S D +R D + G
Sbjct: 696 IEAQRRQSLKLHVLKLTQNIEALQSRLAKNE-EISHIQSPDIVDRQVPVMGISDAA--GG 752
Query: 1491 YSHQQTNEGSTEYSNDQEAVDGYASDSTLLHSNPGMSDSSCKQGGIQP----DKRIGAYS 1324
++Q E S D +S L + S ++ I P + ++ A
Sbjct: 753 TNYQSIVASPIEDSGDAAEDTDPSSQKELSNDFSDTDHDSQQEFPINPFFQYEGKVEAMG 812
Query: 1323 QSDKPAETEHEFSSESVPKGSVLITYPVEGAQIGASICKENLELDKTIDCCSKSGQKSS- 1147
+ +P +H+ S S+ + + V+ G+++ S+S KSS
Sbjct: 813 DTIQP---QHQ-SISSIKESKSMFNVNVDQETFGSAV--------------SESVSKSSR 854
Query: 1146 PDSNLRVTHLSSF--PDEVENEALNDSLDFPTNLLGHIPGNKSIESSVKAGEDEFKSSDH 973
+ + + SF P EV N+ S VK + +S+
Sbjct: 855 GEVKIHFSETRSFNKPREVNNKM-----------------EVSQPPPVKP-QQTLRSTRS 896
Query: 972 RDEMQNGSGVKGPIRSVTLSNRDRLLLRKQALKMKKRPVLAVGKSNLITGVAKTIKVHFE 793
R E + R V LSNR+RLLLRKQALKMKK+PVLAVG+SN++TGVAK IK HF+
Sbjct: 897 RSEGMS-------TRRVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFK 949
Query: 792 KHPLAIVDVKGRAKGTSIQELVFKLEKATGSVLVSQEPNKVILYRGWGEAEEPSVTKKKK 613
K+PLAIV+VKGRAKGTS++E+VFKLE+ATG+VLVSQEP+KVILYRGWG E
Sbjct: 950 KYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGE-------- 1001
Query: 612 RNVRSALTGTDDSTTE---------VVSPQLIKAIRLECGLDGSQENEV 493
R A G D S ++ +SP+LI AIRLECGL + + EV
Sbjct: 1002 ---RGASNGNDTSNSKNSREQKELMSISPELISAIRLECGLQSNNDMEV 1047
Score = 61.6 bits (148), Expect = 2e-06
Identities = 35/102 (34%), Positives = 54/102 (52%)
Frame = -1
Query: 2028 PEVDREGITKEERYMLKRVGQRMKPYLPMGRRGVFDGTIENMHLHWKYRELVKIISTDRC 1849
P + + EE L+ VG ++ L +G+ G+ +G + +H W+ ELVKI D C
Sbjct: 166 PSLAELTLPAEELRRLRTVGIALRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDIC 225
Query: 1848 IEDAHRTARALEAESGGILIAVERARKGYAIIIYRGKNYMRP 1723
+ RT LE ++GG++I R G II+YRG +Y P
Sbjct: 226 RLNMKRTHELLEKKTGGLVI----WRSGSNIILYRGADYKYP 263