BLASTX nr result
ID: Cocculus22_contig00006303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00006303
(1259 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588267.1| hypothetical protein MTR_1g005080 [Medicago ... 220 1e-72
ref|YP_717160.1| hypothetical protein BrnapMp063 [Brassica napus... 129 2e-47
gb|AGC78953.1| hypothetical protein (mitochondrion) [Vicia faba] 97 3e-23
ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putati... 107 8e-21
emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera] 107 1e-20
ref|XP_006354268.1| PREDICTED: uncharacterized protein LOC102588... 71 5e-19
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica... 93 3e-16
gb|EXB59943.1| hypothetical protein L484_013063 [Morus notabilis] 87 2e-14
ref|XP_002516369.1| conserved hypothetical protein [Ricinus comm... 87 2e-14
ref|XP_004497967.1| PREDICTED: uncharacterized protein LOC101492... 86 4e-14
emb|CBI31103.3| unnamed protein product [Vitis vinifera] 77 2e-11
emb|CBI19993.3| unnamed protein product [Vitis vinifera] 72 5e-10
ref|YP_173417.1| hypothetical protein NitaMp075 [Nicotiana tabac... 70 2e-09
ref|NP_001176985.1| Os12g0525100 [Oryza sativa Japonica Group] g... 44 1e-08
emb|CBI35736.3| unnamed protein product [Vitis vinifera] 49 2e-07
ref|XP_004515392.1| PREDICTED: uncharacterized protein LOC101505... 63 3e-07
ref|YP_007889787.1| NADH dehydrogenase subunit 4 (mitochondrion)... 42 1e-06
>ref|XP_003588267.1| hypothetical protein MTR_1g005080 [Medicago truncatula]
gi|355477315|gb|AES58518.1| hypothetical protein
MTR_1g005080 [Medicago truncatula]
Length = 182
Score = 220 bits (561), Expect(2) = 1e-72
Identities = 119/163 (73%), Positives = 121/163 (74%)
Frame = +3
Query: 597 MESTSYVERPTEXXXXXXXXXXXXXXIGPMHWAHLMEGKAKLKCSCVVVVRRLDAFPSLP 776
MESTSYVERP+ IGPMH E K K SCVVVVRRLDAFPSLP
Sbjct: 1 MESTSYVERPSASSVLLS--------IGPMHCHGWREKK---KYSCVVVVRRLDAFPSLP 49
Query: 777 GIVPHRKKERSAPARPVGPLT*SEELSLNWRTEVTFGTILPTANTCPVQRERAAQTNVSC 956
IVPHRKK+ EELSLNWRTEVTFGTILPTANTCPVQRERAAQ NVSC
Sbjct: 50 DIVPHRKKD--------------EELSLNWRTEVTFGTILPTANTCPVQRERAAQKNVSC 95
Query: 957 YTESPAGHRGPSGKAMICRGTDHSFFHWGQVHERQLQTSHIRR 1085
YTESPAGHRGPSGKAMI RGTDHSFFHWGQVHERQLQTSHIRR
Sbjct: 96 YTESPAGHRGPSGKAMIRRGTDHSFFHWGQVHERQLQTSHIRR 138
Score = 81.6 bits (200), Expect(2) = 1e-72
Identities = 38/42 (90%), Positives = 38/42 (90%)
Frame = +2
Query: 1133 TSCRGCSTPLRSHELNFVAFPRAKRMGAVPWVSFGAGGGERP 1258
TSCRGCSTP RSHE NFVAFPRAKRMGAV WVSFGAGG ERP
Sbjct: 139 TSCRGCSTPPRSHEPNFVAFPRAKRMGAVLWVSFGAGGEERP 180
>ref|YP_717160.1| hypothetical protein BrnapMp063 [Brassica napus]
gi|353526387|ref|YP_004927459.1| orf116 (mitochondrion)
[Brassica oleracea] gi|353526503|ref|YP_004927573.1|
orf116 (mitochondrion) [Brassica carinata]
gi|353526704|ref|YP_004927875.1| orf116 (mitochondrion)
[Brassica rapa subsp. oleifera]
gi|353531386|ref|YP_004927778.1| orf116 (mitochondrion)
[Brassica juncea] gi|37591107|dbj|BAC98909.1|
hypothetical protein [Brassica napus]
gi|335354892|gb|AEH43448.1| orf116 [Brassica rapa subsp.
oleifera] gi|335354932|gb|AEH43487.1| orf116 [Brassica
oleracea] gi|335355034|gb|AEH43588.1| orf116 [Brassica
carinata] gi|335355119|gb|AEH43672.1| orf116 [Brassica
juncea] gi|339511321|emb|CBX48376.1| unnamed protein
product [Brassica napus] gi|371925879|gb|AEX57680.1|
hypothetical protein RasatMp049 (mitochondrion)
[Raphanus sativus] gi|443298134|gb|AGC81678.1|
hypothetical protein DCGMS_00180 (mitochondrion)
[Raphanus sativus]
Length = 116
Score = 129 bits (325), Expect(3) = 2e-47
Identities = 64/75 (85%), Positives = 66/75 (88%)
Frame = -2
Query: 925 RWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTGRAGAERSFFLCGTMPGREGNASRRR 746
R TGH+LAVGSMVPKVTSVRQFRLNSSLYVSGP RAGA RSFFLCGTMPGREGNASRRR
Sbjct: 34 RRTGHMLAVGSMVPKVTSVRQFRLNSSLYVSGPMARAGAPRSFFLCGTMPGREGNASRRR 93
Query: 745 TTTTQLHFSFAFPSM 701
TTT QLHF F+ M
Sbjct: 94 TTTRQLHFGFSLHEM 108
Score = 72.4 bits (176), Expect(3) = 2e-47
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 1029 MSDPFPCRSWPYHSVPDGQRGIRYSSSRSFA 937
MSDPFPCRSWPYHSVPDGQRGIRYSSSRSFA
Sbjct: 1 MSDPFPCRSWPYHSVPDGQRGIRYSSSRSFA 31
Score = 36.6 bits (83), Expect(3) = 2e-47
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1
Query: 713 FSLHEMSPVHWTDG 672
FSLHEMSPVHWTDG
Sbjct: 103 FSLHEMSPVHWTDG 116
>gb|AGC78953.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 117
Score = 97.1 bits (240), Expect(2) = 3e-23
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +1
Query: 64 QGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSKTLPSVPKTKAP 201
QGQNMCAGRATHQPTSNGGENIACRNKSLI+GVSKTLPSVPKTKAP
Sbjct: 72 QGQNMCAGRATHQPTSNGGENIACRNKSLIQGVSKTLPSVPKTKAP 117
Score = 40.0 bits (92), Expect(2) = 3e-23
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +3
Query: 3 TIGMSSRAAAVRSPILSYGHTR 68
TIGM SRAAAVRSPI SYGH R
Sbjct: 50 TIGMFSRAAAVRSPIFSYGHKR 71
>ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
gi|223524771|gb|EEF27701.1| NADH-ubiquinone
oxidoreductase chain, putative [Ricinus communis]
Length = 366
Score = 107 bits (268), Expect = 8e-21
Identities = 52/61 (85%), Positives = 53/61 (86%)
Frame = +1
Query: 52 VMDTQGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSKTLPSVPKTKAP*RPGTGVGDG 231
VMDTQGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSK LPSVPKTK+P P G G
Sbjct: 218 VMDTQGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSKRLPSVPKTKSPLAPRDGSGGR 277
Query: 232 P 234
P
Sbjct: 278 P 278
Score = 63.9 bits (154), Expect(2) = 7e-20
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = +1
Query: 724 NVVVLLLFAASTHFLLSPASSHTERKSAPPRPDL 825
NVVVLLLFAASTH LLSPASSHTERKSA PRPDL
Sbjct: 333 NVVVLLLFAASTHSLLSPASSHTERKSAEPRPDL 366
Score = 61.6 bits (148), Expect(2) = 7e-20
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +2
Query: 569 PSERNRYVSDGVYIVRRAPN*GFITCSQGQLSSLIHRSNALGSSHGGKSK 718
P R++SDGVYI+RRAP F+ GQLSSLIHRSNALGSSHGGK K
Sbjct: 288 PRTTYRFLSDGVYILRRAPK-RFL----GQLSSLIHRSNALGSSHGGKRK 332
>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
Length = 325
Score = 107 bits (267), Expect = 1e-20
Identities = 71/144 (49%), Positives = 81/144 (56%)
Frame = +2
Query: 575 ERNRYVSDGVYIVRRAPN*GFITCSQGQLSSLIHRSNALGSSHGGKSKAKM*LCCCCSPP 754
+RNRYVSDGVYIVRRAP F+ GQLSSLIHRSNALGSSHGGKS+ + L +
Sbjct: 46 KRNRYVSDGVYIVRRAPK-RFL----GQLSSLIHRSNALGSSHGGKSQNVVVLLLFAAST 100
Query: 755 RRISFSPRHRPTQKERALRPGPTCRSANVKRGVEPELANRSHFRNHTSYS*HVSSPAGTR 934
+ SP T+++ A P P PAGTR
Sbjct: 101 HSL-LSPASSHTERKSA-EPRP-------------------------------DLPAGTR 127
Query: 935 SANERELLYRIPRWPSGTEW*GHD 1006
SANERELLYRIPRWPSGTEW +D
Sbjct: 128 SANERELLYRIPRWPSGTEWCTND 151
Score = 83.2 bits (204), Expect = 2e-13
Identities = 60/141 (42%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Frame = +1
Query: 715 QS*NVVVLLLFAASTHFLLSPASSHTERKSAPPRPDL*VR*RKARS*A*TGEPKSLSEPY 894
+S NVVVLLLFAASTH LLSPASSHT
Sbjct: 86 KSQNVVVLLLFAASTHSLLSPASSHT---------------------------------- 111
Query: 895 FLQLTRVQSSGNAQRKRT*AAIPNPPLAIGDRVVRP*SAGERITHSSIGDR-CTNDNSKR 1071
+RK +A P P L G R RI G CTNDNSKR
Sbjct: 112 -------------ERK---SAEPRPDLPAGTRSANERELLYRIPRWPSGTEWCTNDNSKR 155
Query: 1072 HTSAAYLPFRWHQRDPAKVRN 1134
HTSAAYLPFRWHQRDPAK +
Sbjct: 156 HTSAAYLPFRWHQRDPAKAES 176
Score = 80.9 bits (198), Expect = 1e-12
Identities = 39/49 (79%), Positives = 40/49 (81%)
Frame = +3
Query: 132 MSQQKLDSRRQQNTAVCSKNKSPLAPRDGSGGRPYXXXXXXXXLRSKNR 278
MSQQKLDSRRQQNTAVCSKNKSPLAPRDGSGGRPY LR +NR
Sbjct: 1 MSQQKLDSRRQQNTAVCSKNKSPLAPRDGSGGRPYAQATAAPALRKRNR 49
>ref|XP_006354268.1| PREDICTED: uncharacterized protein LOC102588707 [Solanum tuberosum]
Length = 610
Score = 71.2 bits (173), Expect(2) = 5e-19
Identities = 39/48 (81%), Positives = 41/48 (85%)
Frame = +2
Query: 575 ERNRYVSDGVYIVRRAPN*GFITCSQGQLSSLIHRSNALGSSHGGKSK 718
ERNRYVSDGVYIVRRAP F+ GQLSSLIHRSNALGSSHGGKS+
Sbjct: 536 ERNRYVSDGVYIVRRAPK-RFL----GQLSSLIHRSNALGSSHGGKSQ 578
Score = 51.2 bits (121), Expect(2) = 5e-19
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +1
Query: 715 QS*NVVVLLLFAASTHFLLSPASSHTERKSAPPRPDL 825
+S NVVVLL AASTH LSP SSHTERKSA PRPDL
Sbjct: 576 KSQNVVVLL--AASTHSPLSPVSSHTERKSAEPRPDL 610
>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
gi|355477316|gb|AES58519.1| NADH-ubiquinone
oxidoreductase chain [Medicago truncatula]
Length = 556
Score = 92.8 bits (229), Expect = 3e-16
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +1
Query: 70 QNMCAGRATHQPTSNGGENIACRNKSLIRGVSKTLPSVPKTKAP 201
QNMCAGRATHQPTSNGGENIACRNKSLI+GVSKTLPSVPKTKAP
Sbjct: 513 QNMCAGRATHQPTSNGGENIACRNKSLIQGVSKTLPSVPKTKAP 556
>gb|EXB59943.1| hypothetical protein L484_013063 [Morus notabilis]
Length = 196
Score = 87.0 bits (214), Expect = 2e-14
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +1
Query: 1045 RCTNDNSKRHTSAAYLPFRWHQRDPAKVRNFVSRLLHSAAVS 1170
RCTNDNSKRHTS AYLPFRWHQRDPAKVRNFVSRLLHSA V+
Sbjct: 26 RCTNDNSKRHTSVAYLPFRWHQRDPAKVRNFVSRLLHSAPVT 67
>ref|XP_002516369.1| conserved hypothetical protein [Ricinus communis]
gi|223544467|gb|EEF45986.1| conserved hypothetical
protein [Ricinus communis]
Length = 271
Score = 86.7 bits (213), Expect = 2e-14
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +3
Query: 924 RERAAQTNVSCYTESPAGHRGPSGKAMICRGTDHSFFHWGQ 1046
+ERAAQTNVSCYTESP GHRGPSGKAMI RGTDHSFFHWGQ
Sbjct: 161 QERAAQTNVSCYTESPVGHRGPSGKAMIRRGTDHSFFHWGQ 201
>ref|XP_004497967.1| PREDICTED: uncharacterized protein LOC101492762 [Cicer arietinum]
Length = 718
Score = 85.5 bits (210), Expect = 4e-14
Identities = 42/53 (79%), Positives = 43/53 (81%), Gaps = 7/53 (13%)
Frame = -1
Query: 1226 PTAQRPFASRA-------GRQRSSVHETAAEWSSRDTKFLTLAGSRWCHLNGR 1089
PTA RPFASRA GR RSSVHETAAEWSSRDTKFL LAGSRWCHLNG+
Sbjct: 18 PTAHRPFASRARRERSRVGRPRSSVHETAAEWSSRDTKFLALAGSRWCHLNGK 70
>emb|CBI31103.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 77.0 bits (188), Expect = 2e-11
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = +1
Query: 55 MDTQGQNMCAGRATHQPTSNGGENIACRNKSLIRGVSK 168
MDTQGQNMCAGRATHQPTSNG ENIACRNKSLIRGV +
Sbjct: 1 MDTQGQNMCAGRATHQPTSNGEENIACRNKSLIRGVER 38
>emb|CBI19993.3| unnamed protein product [Vitis vinifera]
Length = 83
Score = 72.0 bits (175), Expect = 5e-10
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 3 TIGMSSRAAAVRSPILSYGHTRPKHVCRACDPSTY 107
TIGM SRA AVRSPILSYGHT+PKHVCRACDPSTY
Sbjct: 49 TIGMFSRAVAVRSPILSYGHTKPKHVCRACDPSTY 83
>ref|YP_173417.1| hypothetical protein NitaMp075 [Nicotiana tabacum]
gi|56806580|dbj|BAD83481.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 171
Score = 70.1 bits (170), Expect = 2e-09
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3
Query: 3 TIGMSSRAAAVRSPILSYGHTRPKHVCRACDPSTY 107
TIGM SRAAAVRSPILSYGHTRPKHVCRA DPSTY
Sbjct: 137 TIGMFSRAAAVRSPILSYGHTRPKHVCRARDPSTY 171
>ref|NP_001176985.1| Os12g0525100 [Oryza sativa Japonica Group]
gi|255670357|dbj|BAH95713.1| Os12g0525100, partial
[Oryza sativa Japonica Group]
Length = 72
Score = 43.9 bits (102), Expect(2) = 1e-08
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3
Query: 3 TIGMSSRAAAVRSPILSYGHTRPKHVC 83
TIGM SRAAAVRSPILSYGHT C
Sbjct: 30 TIGMFSRAAAVRSPILSYGHTSKAKTC 56
Score = 43.9 bits (102), Expect(2) = 1e-08
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +2
Query: 59 THKAKTCVPGVRPINLLAMGEKT 127
T KAKTCVPGVRPINLLA+G KT
Sbjct: 50 TSKAKTCVPGVRPINLLAIGGKT 72
>emb|CBI35736.3| unnamed protein product [Vitis vinifera]
Length = 35
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2
Query: 781 MPGREGNASRRRTTTTQLHFSFAFPSM 701
MPGREGNASRRRTTTTQLHF F+ M
Sbjct: 1 MPGREGNASRRRTTTTQLHFGFSLHEM 27
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -1
Query: 713 FSLHEMSPVHWTDG 672
FSLHEMSPV+WTDG
Sbjct: 22 FSLHEMSPVNWTDG 35
>ref|XP_004515392.1| PREDICTED: uncharacterized protein LOC101505763 [Cicer arietinum]
Length = 137
Score = 62.8 bits (151), Expect = 3e-07
Identities = 29/34 (85%), Positives = 29/34 (85%)
Frame = +2
Query: 1118 QLR*GTSCRGCSTPLRSHELNFVAFPRAKRMGAV 1219
QLR GTSCRGCSTP SHELNFV FPRAKRMG V
Sbjct: 8 QLRQGTSCRGCSTPTLSHELNFVTFPRAKRMGVV 41
>ref|YP_007889787.1| NADH dehydrogenase subunit 4 (mitochondrion) [Vigna angularis]
gi|478620945|dbj|BAN14991.1| NADH dehydrogenase subunit
4 (mitochondrion) [Vigna angularis]
Length = 525
Score = 42.4 bits (98), Expect(2) = 1e-06
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +3
Query: 3 TIGMSSRAAAVRSPILSYGHTR 68
TIGM SRAAAVRSPI SYGHTR
Sbjct: 320 TIGMFSRAAAVRSPIFSYGHTR 341
Score = 38.1 bits (87), Expect(2) = 1e-06
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 64 QGQNMCAGRATHQPTSNGG 120
QGQNMCAGRATHQPT+ G
Sbjct: 342 QGQNMCAGRATHQPTNIQG 360