BLASTX nr result
ID: Cocculus22_contig00006078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00006078
(484 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 122 5e-26
emb|CBI32069.3| unnamed protein product [Vitis vinifera] 122 5e-26
emb|CAN76232.1| hypothetical protein VITISV_039406 [Vitis vinifera] 122 5e-26
ref|XP_004298595.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 118 7e-25
ref|XP_007227036.1| hypothetical protein PRUPE_ppa000444mg [Prun... 118 7e-25
ref|XP_006357217.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 118 1e-24
ref|XP_004517036.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 118 1e-24
ref|XP_007044460.1| DEAD/DEAH box helicase, putative isoform 3 [... 117 2e-24
ref|XP_007044459.1| DEAD/DEAH box helicase, putative isoform 2 [... 117 2e-24
ref|XP_007044458.1| DEAD/DEAH box helicase, putative isoform 1 [... 117 2e-24
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth... 117 2e-24
gb|EXB74741.1| DEAD-box ATP-dependent RNA helicase ISE2 [Morus n... 117 2e-24
ref|XP_004238735.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 116 3e-24
ref|XP_006839141.1| hypothetical protein AMTR_s00090p00178540 [A... 115 5e-24
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 115 8e-24
ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 115 8e-24
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr... 114 1e-23
gb|EYU28661.1| hypothetical protein MIMGU_mgv1a000418mg [Mimulus... 113 2e-23
ref|XP_007157531.1| hypothetical protein PHAVU_002G077700g [Phas... 113 3e-23
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 113 3e-23
>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Vitis vinifera]
Length = 1174
Score = 122 bits (306), Expect = 5e-26
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTID+LAQIPKLPDIDPL+Q+NA+ ASNVMDRPPISE
Sbjct: 1112 GLTWREIMMDCAMDEGDLARLLRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISE 1171
Query: 181 LAG 189
LAG
Sbjct: 1172 LAG 1174
>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
Length = 1064
Score = 122 bits (306), Expect = 5e-26
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTID+LAQIPKLPDIDPL+Q+NA+ ASNVMDRPPISE
Sbjct: 1002 GLTWREIMMDCAMDEGDLARLLRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISE 1061
Query: 181 LAG 189
LAG
Sbjct: 1062 LAG 1064
>emb|CAN76232.1| hypothetical protein VITISV_039406 [Vitis vinifera]
Length = 239
Score = 122 bits (306), Expect = 5e-26
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTID+LAQIPKLPDIDPL+Q+NA+ ASNVMDRPPISE
Sbjct: 177 GLTWREIMMDCAMDEGDLARLLRRTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISE 236
Query: 181 LAG 189
LAG
Sbjct: 237 LAG 239
>ref|XP_004298595.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1176
Score = 118 bits (296), Expect = 7e-25
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTIDLL QIPKLPDIDP++Q+NA ASN+MDRPPISE
Sbjct: 1114 GLTWREIMMDCAMDEGDLARLLRRTIDLLVQIPKLPDIDPVLQSNAKTASNIMDRPPISE 1173
Query: 181 LAG 189
LAG
Sbjct: 1174 LAG 1176
>ref|XP_007227036.1| hypothetical protein PRUPE_ppa000444mg [Prunus persica]
gi|462423972|gb|EMJ28235.1| hypothetical protein
PRUPE_ppa000444mg [Prunus persica]
Length = 1178
Score = 118 bits (296), Expect = 7e-25
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTW+EIMMDCAMDEGDLARLLRRTIDLL QIPKLPDIDPL+Q+NA ASN+MDRPPISE
Sbjct: 1116 GLTWKEIMMDCAMDEGDLARLLRRTIDLLVQIPKLPDIDPLLQSNAKTASNIMDRPPISE 1175
Query: 181 LAG 189
LAG
Sbjct: 1176 LAG 1178
>ref|XP_006357217.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1156
Score = 118 bits (295), Expect = 1e-24
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTW+EIMMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDPL+Q NA ASNVMDRPPISE
Sbjct: 1094 GLTWKEIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQINAKSASNVMDRPPISE 1153
Query: 181 LAG 189
LAG
Sbjct: 1154 LAG 1156
>ref|XP_004517036.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Cicer arietinum]
Length = 1165
Score = 118 bits (295), Expect = 1e-24
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMD+GDLARLLRRTIDLLAQIPKLPDIDPL+Q NA AS+VMDRPPISE
Sbjct: 1103 GLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLPDIDPLLQRNARAASDVMDRPPISE 1162
Query: 181 LAG 189
LAG
Sbjct: 1163 LAG 1165
>ref|XP_007044460.1| DEAD/DEAH box helicase, putative isoform 3 [Theobroma cacao]
gi|508708395|gb|EOY00292.1| DEAD/DEAH box helicase,
putative isoform 3 [Theobroma cacao]
Length = 813
Score = 117 bits (293), Expect = 2e-24
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GL+WRE+MMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPL+Q NA AS+VMDRPPISE
Sbjct: 751 GLSWRELMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISE 810
Query: 181 LAG 189
LAG
Sbjct: 811 LAG 813
>ref|XP_007044459.1| DEAD/DEAH box helicase, putative isoform 2 [Theobroma cacao]
gi|508708394|gb|EOY00291.1| DEAD/DEAH box helicase,
putative isoform 2 [Theobroma cacao]
Length = 1031
Score = 117 bits (293), Expect = 2e-24
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GL+WRE+MMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPL+Q NA AS+VMDRPPISE
Sbjct: 969 GLSWRELMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISE 1028
Query: 181 LAG 189
LAG
Sbjct: 1029 LAG 1031
>ref|XP_007044458.1| DEAD/DEAH box helicase, putative isoform 1 [Theobroma cacao]
gi|508708393|gb|EOY00290.1| DEAD/DEAH box helicase,
putative isoform 1 [Theobroma cacao]
Length = 1167
Score = 117 bits (293), Expect = 2e-24
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GL+WRE+MMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPL+Q NA AS+VMDRPPISE
Sbjct: 1105 GLSWRELMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISE 1164
Query: 181 LAG 189
LAG
Sbjct: 1165 LAG 1167
>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
Length = 1159
Score = 117 bits (293), Expect = 2e-24
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTW+EIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPL+Q+NA AS+VMDRPPISE
Sbjct: 1097 GLTWKEIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLLQSNAKGASSVMDRPPISE 1156
Query: 181 LAG 189
LAG
Sbjct: 1157 LAG 1159
>gb|EXB74741.1| DEAD-box ATP-dependent RNA helicase ISE2 [Morus notabilis]
Length = 1123
Score = 117 bits (292), Expect = 2e-24
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWRE+MMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDP++Q+NA AS+VMDRPPISE
Sbjct: 1061 GLTWRELMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPVLQSNARSASDVMDRPPISE 1120
Query: 181 LAG 189
LAG
Sbjct: 1121 LAG 1123
>ref|XP_004238735.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Solanum lycopersicum]
Length = 1154
Score = 116 bits (291), Expect = 3e-24
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTW+EIMMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDPL+Q NA ASN MDRPPISE
Sbjct: 1092 GLTWKEIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQINAKSASNAMDRPPISE 1151
Query: 181 LAG 189
LAG
Sbjct: 1152 LAG 1154
>ref|XP_006839141.1| hypothetical protein AMTR_s00090p00178540 [Amborella trichopoda]
gi|548841657|gb|ERN01710.1| hypothetical protein
AMTR_s00090p00178540 [Amborella trichopoda]
Length = 1046
Score = 115 bits (289), Expect = 5e-24
Identities = 54/63 (85%), Positives = 61/63 (96%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMD+GDLARLLRRTID+L+QIPKLPDIDP +QNNA+LASN+MDR PI+E
Sbjct: 984 GLTWREIMMDCAMDDGDLARLLRRTIDILSQIPKLPDIDPSLQNNAILASNLMDRVPINE 1043
Query: 181 LAG 189
LAG
Sbjct: 1044 LAG 1046
>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Cucumis sativus]
Length = 1168
Score = 115 bits (287), Expect = 8e-24
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDP +Q NA AS+VM+RPPISE
Sbjct: 1106 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISE 1165
Query: 181 LAG 189
LAG
Sbjct: 1166 LAG 1168
>ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
ISE2, chloroplastic-like [Cucumis sativus]
Length = 1193
Score = 115 bits (287), Expect = 8e-24
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDP +Q NA AS+VM+RPPISE
Sbjct: 1131 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISE 1190
Query: 181 LAG 189
LAG
Sbjct: 1191 LAG 1193
>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
DOB1 [Medicago truncatula]
Length = 1201
Score = 114 bits (285), Expect = 1e-23
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMD+GDLARLLRRTIDLLAQIP LPDIDPL+Q NA A +VMDRPPISE
Sbjct: 1127 GLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPNLPDIDPLLQKNARAACDVMDRPPISE 1186
Query: 181 LAG 189
LAG
Sbjct: 1187 LAG 1189
>gb|EYU28661.1| hypothetical protein MIMGU_mgv1a000418mg [Mimulus guttatus]
Length = 1168
Score = 113 bits (283), Expect = 2e-23
Identities = 53/61 (86%), Positives = 60/61 (98%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMDEGDLARLLRRTIDLLAQ+PKLPDIDP++++NA+ AS+VMDRPPISE
Sbjct: 1106 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPVLKSNAVKASSVMDRPPISE 1165
Query: 181 L 183
L
Sbjct: 1166 L 1166
>ref|XP_007157531.1| hypothetical protein PHAVU_002G077700g [Phaseolus vulgaris]
gi|561030946|gb|ESW29525.1| hypothetical protein
PHAVU_002G077700g [Phaseolus vulgaris]
Length = 1165
Score = 113 bits (282), Expect = 3e-23
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWREIMMDCAMD+GDLARLLRRTID+L QIPKLPDIDPL+Q NA AS VMDRPPISE
Sbjct: 1103 GLTWREIMMDCAMDDGDLARLLRRTIDILVQIPKLPDIDPLLQRNAKAASAVMDRPPISE 1162
Query: 181 LAG 189
L G
Sbjct: 1163 LVG 1165
>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Glycine max]
Length = 1162
Score = 113 bits (282), Expect = 3e-23
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +1
Query: 1 GLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLPDIDPLMQNNALLASNVMDRPPISE 180
GLTWRE+MMDCAMD+GDLARLLRRTIDLL QIPKLPDIDPL+++NA AS+VMDRPPISE
Sbjct: 1100 GLTWRELMMDCAMDDGDLARLLRRTIDLLVQIPKLPDIDPLLKHNAKAASSVMDRPPISE 1159
Query: 181 LAG 189
L G
Sbjct: 1160 LVG 1162