BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00006036
         (625 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II su...   218   1e-54
ref|XP_007201425.1| hypothetical protein PRUPE_ppa013559mg [Prun...   216   3e-54
ref|XP_007131395.1| hypothetical protein PHAVU_011G010100g [Phas...   214   2e-53
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...   214   2e-53
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, ...   214   2e-53
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...   213   3e-53
ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citr...   213   4e-53
ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II su...   213   5e-53
gb|AFK46555.1| unknown [Lotus japonicus]                              213   5e-53
ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa poly...   209   7e-52
emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]   209   7e-52
gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK...   208   9e-52
ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II su...   208   1e-51
ref|XP_006857607.1| hypothetical protein AMTR_s00061p00108850 [A...   207   2e-51
ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II su...   207   3e-51
ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Caps...   205   8e-51
ref|XP_002517812.1| DNA-directed RNA polymerase II 13.6 kD polyp...   205   1e-50
ref|XP_007052503.1| DNA-directed RNA polymerase II subunit RPB11...   204   2e-50
ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]...   204   2e-50
ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutr...   203   3e-50

>ref|XP_002285578.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Vitis
           vinifera] gi|296082163|emb|CBI21168.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  218 bits (555), Expect = 1e-54
 Identities = 105/116 (90%), Positives = 112/116 (96%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKII+RIHTTSQSSPMQAYNQAI DLDKEL++LK+ FE EL+KHSREY
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEVELAKHSREY 116


>ref|XP_007201425.1| hypothetical protein PRUPE_ppa013559mg [Prunus persica]
           gi|462396825|gb|EMJ02624.1| hypothetical protein
           PRUPE_ppa013559mg [Prunus persica]
          Length = 116

 Score =  216 bits (551), Expect = 3e-54
 Identities = 106/116 (91%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK  FE E++KHS EY
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKHSVEY 116


>ref|XP_007131395.1| hypothetical protein PHAVU_011G010100g [Phaseolus vulgaris]
           gi|561004395|gb|ESW03389.1| hypothetical protein
           PHAVU_011G010100g [Phaseolus vulgaris]
          Length = 116

 Score =  214 bits (544), Expect = 2e-53
 Identities = 102/116 (87%), Positives = 111/116 (95%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKII+RIHTTSQSSPMQAYNQ+I DLD+EL+HLK+ FE E+ K SR+Y
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDRELDHLKNAFEAEMLKFSRDY 116


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score =  214 bits (544), Expect = 2e-53
 Identities = 104/116 (89%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK+ FE E +K SR+Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKFSRDY 116


>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11
           [Glycine max]
          Length = 116

 Score =  214 bits (544), Expect = 2e-53
 Identities = 103/116 (88%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQ+I DLD+EL+HLK  FE E+ K SR+Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score =  213 bits (543), Expect = 3e-53
 Identities = 102/116 (87%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQ++ DLD+EL+HLK  FE E+ K SR+Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|XP_006439089.1| hypothetical protein CICLE_v10033103mg [Citrus clementina]
           gi|568858641|ref|XP_006482856.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 11-like [Citrus
           sinensis] gi|557541285|gb|ESR52329.1| hypothetical
           protein CICLE_v10033103mg [Citrus clementina]
          Length = 116

 Score =  213 bits (542), Expect = 4e-53
 Identities = 105/116 (90%), Positives = 109/116 (93%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+ LK  FE EL+KHSR Y
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDTLKSAFEAELAKHSRVY 116


>ref|XP_004289695.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 2 [Fragaria vesca subsp. vesca]
          Length = 118

 Score =  213 bits (541), Expect = 5e-53
 Identities = 104/115 (90%), Positives = 109/115 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSRE 244
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK  FE E++KHS +
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSNFEAEVAKHSMQ 115


>gb|AFK46555.1| unknown [Lotus japonicus]
          Length = 116

 Score =  213 bits (541), Expect = 5e-53
 Identities = 102/116 (87%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHT SQSSPMQAYNQ+I DLDKEL+HLK+ FE ++ + SR+Y
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDHLKNAFEADMLRFSRDY 116


>ref|XP_002313254.1| DNA-directed RNA polymerase II 13.6 kDa polypeptide family protein
           [Populus trichocarpa] gi|566186802|ref|XP_006379118.1|
           hypothetical protein POPTR_0009s07520g [Populus
           trichocarpa] gi|118484276|gb|ABK94017.1| unknown
           [Populus trichocarpa] gi|222849662|gb|EEE87209.1|
           DNA-directed RNA polymerase II 13.6 kDa polypeptide
           family protein [Populus trichocarpa]
           gi|550331237|gb|ERP56915.1| hypothetical protein
           POPTR_0009s07520g [Populus trichocarpa]
          Length = 116

 Score =  209 bits (531), Expect = 7e-52
 Identities = 101/116 (87%), Positives = 108/116 (93%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDDNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK+ FE EL+    +Y
Sbjct: 61  YKLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAELANRPGQY 116


>emb|CAN70445.1| hypothetical protein VITISV_015574 [Vitis vinifera]
          Length = 129

 Score =  209 bits (531), Expect = 7e-52
 Identities = 105/129 (81%), Positives = 112/129 (86%), Gaps = 13/129 (10%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKK-------------VSYERDTKIINAASFTIEREDHTIGNILR 448
           MNAPDRYERFVVPEGTKK             VSYERDTKIINAASFT+EREDHTIGNILR
Sbjct: 1   MNAPDRYERFVVPEGTKKYIVFSLLSQKLSLVSYERDTKIINAASFTVEREDHTIGNILR 60

Query: 447 MQLHRDPHVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEE 268
           MQLHRD +VLFAGYKLPHPLQYKII+RIHTTSQSSPMQAYNQAI DLDKEL++LK+ FE 
Sbjct: 61  MQLHRDENVLFAGYKLPHPLQYKIIIRIHTTSQSSPMQAYNQAINDLDKELDYLKNAFEV 120

Query: 267 ELSKHSREY 241
           EL+KHSREY
Sbjct: 121 ELAKHSREY 129


>gb|ACJ83854.1| unknown [Medicago truncatula] gi|388519401|gb|AFK47762.1| unknown
           [Medicago truncatula]
          Length = 116

 Score =  208 bits (530), Expect = 9e-52
 Identities = 101/116 (87%), Positives = 109/116 (93%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKV+YERDTKIINAASFTIEREDHTIGNILRMQLH+DP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVAYERDTKIINAASFTIEREDHTIGNILRMQLHKDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKII+RIHTTSQSSPMQAYNQ+I DLDKEL+ LK  FE EL K S++Y
Sbjct: 61  YKLPHPLQYKIIIRIHTTSQSSPMQAYNQSINDLDKELDTLKSGFEAELLKFSKDY 116


>ref|XP_004489205.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like [Cicer
           arietinum] gi|502152948|ref|XP_004509165.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB11-like
           isoform X1 [Cicer arietinum]
           gi|502152950|ref|XP_004509166.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB11-like isoform X2 [Cicer
           arietinum]
          Length = 116

 Score =  208 bits (529), Expect = 1e-51
 Identities = 102/116 (87%), Positives = 108/116 (93%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTI NILRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIANILRMQLHRDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKIIVRIHT SQSSPMQAYNQ+I DLDKEL+ LK+ FE EL K S++Y
Sbjct: 61  YKLPHPLQYKIIVRIHTASQSSPMQAYNQSINDLDKELDQLKNGFEAELLKFSKDY 116


>ref|XP_006857607.1| hypothetical protein AMTR_s00061p00108850 [Amborella trichopoda]
           gi|548861703|gb|ERN19074.1| hypothetical protein
           AMTR_s00061p00108850 [Amborella trichopoda]
          Length = 122

 Score =  207 bits (528), Expect = 2e-51
 Identities = 99/106 (93%), Positives = 104/106 (98%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HT+GN+LRMQLHRDP+VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTVGNVLRMQLHRDPNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFE 271
           YKLPHPLQYKIIVRI TTSQSSPMQAYNQAI DLDKELNHLKD+FE
Sbjct: 61  YKLPHPLQYKIIVRIQTTSQSSPMQAYNQAINDLDKELNHLKDIFE 106


>ref|XP_004251169.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Solanum lycopersicum] gi|565346226|ref|XP_006340167.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 11-like [Solanum tuberosum]
          Length = 116

 Score =  207 bits (526), Expect = 3e-51
 Identities = 98/116 (84%), Positives = 109/116 (93%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEG KKVSYERDTKI+NAA+FT+EREDHTIGNI+RMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGVKKVSYERDTKIMNAATFTVEREDHTIGNIVRMQLHRDDNVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           YKLPHPLQYKI++RI TTSQSSPMQAYNQAI DLDKEL+HLK  FE EL+KH+R+Y
Sbjct: 61  YKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKSQFEGELAKHTRDY 116


>ref|XP_006292069.1| hypothetical protein CARUB_v10018264mg [Capsella rubella]
           gi|482560776|gb|EOA24967.1| hypothetical protein
           CARUB_v10018264mg [Capsella rubella]
          Length = 116

 Score =  205 bits (522), Expect = 8e-51
 Identities = 99/116 (85%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSY+RDTKIINAASFTIEREDHTIGNI+RMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           Y+LPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL++LK+ FE E++K S +Y
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQY 116


>ref|XP_002517812.1| DNA-directed RNA polymerase II 13.6 kD polypeptide, putative
           [Ricinus communis] gi|223543084|gb|EEF44619.1|
           DNA-directed RNA polymerase II 13.6 kD polypeptide,
           putative [Ricinus communis]
          Length = 156

 Score =  205 bits (521), Expect = 1e-50
 Identities = 99/107 (92%), Positives = 103/107 (96%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+EREDHTIGNILRMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTVEREDHTIGNILRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEE 268
           Y+LPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK  FEE
Sbjct: 61  YRLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSAFEE 107


>ref|XP_007052503.1| DNA-directed RNA polymerase II subunit RPB11 [Theobroma cacao]
           gi|508704764|gb|EOX96660.1| DNA-directed RNA polymerase
           II subunit RPB11 [Theobroma cacao]
          Length = 169

 Score =  204 bits (518), Expect = 2e-50
 Identities = 99/106 (93%), Positives = 103/106 (97%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNI+RMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFE 271
           YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAI DLDKEL+HLK+ FE
Sbjct: 61  YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE 106


>ref|XP_002877842.1| ATRPB13.6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323680|gb|EFH54101.1| ATRPB13.6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 116

 Score =  204 bits (518), Expect = 2e-50
 Identities = 98/116 (84%), Positives = 110/116 (94%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKVSY+RDTKIINAASFTIEREDHTIGNI+RMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           Y+LPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL++LK+ FE E++K S ++
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF 116


>ref|XP_006403846.1| hypothetical protein EUTSA_v10010833mg [Eutrema salsugineum]
           gi|557104965|gb|ESQ45299.1| hypothetical protein
           EUTSA_v10010833mg [Eutrema salsugineum]
          Length = 116

 Score =  203 bits (517), Expect = 3e-50
 Identities = 98/116 (84%), Positives = 109/116 (93%)
 Frame = -2

Query: 588 MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDPHVLFAG 409
           MNAPDRYERFVVPEGTKKV+Y+RDTKIINAASFTIEREDHTIGNI+RMQLHRD +VLFAG
Sbjct: 1   MNAPDRYERFVVPEGTKKVAYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG 60

Query: 408 YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAITDLDKELNHLKDVFEEELSKHSREY 241
           Y+LPHPL+YKIIVRIHTTSQSSPMQAYNQAI DLDKEL +LK+ FE E++K S +Y
Sbjct: 61  YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELEYLKNQFEAEVAKFSTQY 116