BLASTX nr result
ID: Cocculus22_contig00006004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00006004
(628 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23720.3| unnamed protein product [Vitis vinifera] 198 1e-48
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 197 2e-48
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 196 6e-48
ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]... 194 1e-47
gb|AFK38283.1| unknown [Lotus japonicus] 192 9e-47
ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycin... 190 3e-46
ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 189 8e-46
ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citr... 189 8e-46
ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [A... 189 8e-46
ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 189 8e-46
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261... 188 1e-45
ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 187 2e-45
ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 187 2e-45
ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 187 3e-45
ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus ... 186 4e-45
ref|XP_007145349.1| hypothetical protein PHAVU_007G231600g [Phas... 186 4e-45
ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group] g... 185 8e-45
gb|ACU23808.1| unknown [Glycine max] 185 8e-45
gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indi... 185 8e-45
ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 184 1e-44
>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 198 bits (503), Expect = 1e-48
Identities = 95/113 (84%), Positives = 106/113 (93%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGSE+ GRTL+VNFSDKPKPK PLYPETE+KLFVGNL+WSVTSESL Q+F +YGNV+G
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETGRSRGYGFVCYSTK EM+ ALESLNGVELEGRA+R+SLA GRR+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283
Score = 62.8 bits (151), Expect = 8e-08
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +S S L + YG+ VLY+ +TGRSRG+ FV S+ E+ +E+
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 172 LDGSEYGGRTLRVNFS 187
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 197 bits (501), Expect = 2e-48
Identities = 93/113 (82%), Positives = 106/113 (93%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGS++ GR L+VNF+DKPKPKEPLYPETE+KLF+GNL+WSVTSESL Q F +YGNVVG
Sbjct: 167 NLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVG 226
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETG+SRGYGFVCYSTKEE+E AL+SLNGVELEGRALRVSLA GR++
Sbjct: 227 ARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLAEGRKS 279
Score = 67.4 bits (163), Expect = 3e-09
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++V S L M +YG VLY ETGRSRG+ FV S+ E+ E +E+
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167
Query: 352 LNGVELEGRALRVSLA 305
L+G + GR LRV+ A
Sbjct: 168 LDGSQYMGRILRVNFA 183
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 196 bits (497), Expect = 6e-48
Identities = 92/113 (81%), Positives = 105/113 (92%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGS+F GR L+VNFSDKPKPKEPLYPETEHKLFVGNL+WSVTSESL++ F +YGN+VG
Sbjct: 173 NLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVG 232
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETGRSRGYGFVCY+T+ EME AL SLNGVELEGRA+RVSLA G+++
Sbjct: 233 ARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285
Score = 66.2 bits (160), Expect = 7e-09
Identities = 35/85 (41%), Positives = 48/85 (56%)
Frame = -1
Query: 559 EPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTK 380
EP KL+ GNL ++V S L + YG VLYD +TGRSRG+ FV ST
Sbjct: 105 EPEAAPINTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTV 164
Query: 379 EEMEVALESLNGVELEGRALRVSLA 305
E+ +E+L+G + GR LRV+ +
Sbjct: 165 EDCNAVIENLDGSQFMGRILRVNFS 189
>ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]
gi|508714294|gb|EOY06191.1| RNA-binding family protein
[Theobroma cacao]
Length = 293
Score = 194 bits (494), Expect = 1e-47
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGSE+ GRTL+VNFSDKP+P+EPLYPETEHKLFVGNL+WSVTSESL Q F +YG VVG
Sbjct: 181 NLDGSEYLGRTLRVNFSDKPRPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVG 240
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETGRSRGYGFV YSTK EME AL+SLNGVELEGRA+RVS A GRR+
Sbjct: 241 ARVLYDGETGRSRGYGFVSYSTKSEMEAALQSLNGVELEGRAIRVSQAQGRRS 293
Score = 67.4 bits (163), Expect = 3e-09
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++V S L + +YG+ VLYD ETG+SRG+ FV ST E+ +E+
Sbjct: 122 KLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIEN 181
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 182 LDGSEYLGRTLRVNFS 197
>gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 192 bits (487), Expect = 9e-47
Identities = 92/113 (81%), Positives = 102/113 (90%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG EF GRTL+VN SDKPKPKEPLYPETEHKLFVGNL+W+VTSESLIQ+F +YG VVG
Sbjct: 161 NLDGKEFLGRTLRVNLSDKPKPKEPLYPETEHKLFVGNLSWTVTSESLIQVFQEYGTVVG 220
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETGRSRGYGFVCYS + E+E AL SLN VELEGRA+RVSLA G+R+
Sbjct: 221 ARVLYDGETGRSRGYGFVCYSKRSELETALISLNNVELEGRAIRVSLAEGKRS 273
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +SV S L + +YG+ VLYD ++G+SRG+ FV S E+ +E+
Sbjct: 102 KLYFGNLPYSVDSAQLAGLIEEYGSAELIEVLYDRDSGKSRGFAFVTMSCVEDCNTVIEN 161
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+L+
Sbjct: 162 LDGKEFLGRTLRVNLS 177
>ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 190 bits (482), Expect = 3e-46
Identities = 92/112 (82%), Positives = 99/112 (88%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG EF GRTL+VNFS KPKPKEPLYPETEHKLFVGNL+WSVT+E L Q F +YG VVG
Sbjct: 177 NLDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVG 236
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFVCYSTK EME AL +LN VELEGRA+RVSLA G+R
Sbjct: 237 ARVLYDGETGRSRGYGFVCYSTKAEMEAALAALNDVELEGRAMRVSLAQGKR 288
Score = 63.5 bits (153), Expect = 5e-08
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +SV S L + +G+ VLYD +TG+SRG+ FV S E+ +E+
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIQDFGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 177
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 178 LDGKEFLGRTLRVNFS 193
>ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 309
Score = 189 bits (479), Expect = 8e-46
Identities = 92/113 (81%), Positives = 101/113 (89%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG E+ GR L+VNFSDKPKPK PLY ET+ KLFVGNL+WSVT+ESL Q F +YGNVVG
Sbjct: 197 NLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 256
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGE+GRSRGYGFVCYSTK EME ALESLNGVELEGRA+RVSLA GRR+
Sbjct: 257 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 309
Score = 67.0 bits (162), Expect = 4e-09
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++V S L + YG+ VLYD ETGRSRG+ FV ST E+ +E+
Sbjct: 138 KLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRGFAFVTMSTVEDCNAVIEN 197
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 198 LDGREYLGRILRVNFS 213
>ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citrus clementina]
gi|557522218|gb|ESR33585.1| hypothetical protein
CICLE_v10005487mg [Citrus clementina]
Length = 309
Score = 189 bits (479), Expect = 8e-46
Identities = 92/113 (81%), Positives = 101/113 (89%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG E+ GR L+VNFSDKPKPK PLY ET+ KLFVGNL+WSVT+ESL Q F +YGNVVG
Sbjct: 197 NLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSVTTESLTQAFQEYGNVVG 256
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGE+GRSRGYGFVCYSTK EME ALESLNGVELEGRA+RVSLA GRR+
Sbjct: 257 ARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 309
Score = 67.0 bits (162), Expect = 4e-09
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++V S L + YG+ VLYD ETGRSRG+ FV ST E+ +E+
Sbjct: 138 KLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRGFAFVTMSTVEDCNAVIEN 197
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 198 LDGREYLGRILRVNFS 213
>ref|XP_006838974.1| hypothetical protein AMTR_s00002p00271280 [Amborella trichopoda]
gi|548841480|gb|ERN01543.1| hypothetical protein
AMTR_s00002p00271280 [Amborella trichopoda]
Length = 288
Score = 189 bits (479), Expect = 8e-46
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGSE+ GR LKVNF DKPK KEPLYPETE+KLFVGNL+WSVTSESL Q+F +YGNVVG
Sbjct: 176 NLDGSEYGGRILKVNFRDKPKAKEPLYPETEYKLFVGNLSWSVTSESLSQIFGEYGNVVG 235
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETG+SRGYGFVCYSTK EME AL+SL+G++LEGR +RVSLA+G+R
Sbjct: 236 ARVLYDGETGKSRGYGFVCYSTKSEMETALQSLDGMDLEGRPIRVSLALGKR 287
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL + S L + +YG+ VLYD TG+SRG+ FV S+ E+ +++
Sbjct: 117 KLYFGNLPYGCDSAQLAGIVQEYGSPELVEVLYDRNTGKSRGFAFVTMSSVEDANAVIQN 176
Query: 352 LNGVELEGRALRVS 311
L+G E GR L+V+
Sbjct: 177 LDGSEYGGRILKVN 190
>ref|XP_004296531.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 297
Score = 189 bits (479), Expect = 8e-46
Identities = 90/113 (79%), Positives = 103/113 (91%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG E+ GRTL+VNFSDKP+ KEPLYPETE+KLFVGNL+WS TSESL + F +YGNVVG
Sbjct: 185 NLDGREYSGRTLRVNFSDKPRAKEPLYPETEYKLFVGNLSWSATSESLTKAFQEYGNVVG 244
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETGRSRGYGFVC+STK EME AL+SL+GVELEGRA+RVSLA G+R+
Sbjct: 245 ARVLYDGETGRSRGYGFVCFSTKAEMETALQSLDGVELEGRAMRVSLAEGKRS 297
Score = 60.5 bits (145), Expect = 4e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +SV S L + Y + VLY +TG+SRG+ FV S+ E+ +E+
Sbjct: 126 KLYFGNLPYSVDSAQLAGIIQDYASPELIEVLYHRDTGKSRGFAFVTMSSVEDCNAVIEN 185
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 186 LDGREYSGRTLRVNFS 201
>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 188 bits (478), Expect = 1e-45
Identities = 90/105 (85%), Positives = 99/105 (94%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGSE+ GRTL+VNFSDKPKPK PLYPETE+KLFVGNL+WSVTSESL Q+F +YGNV+G
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRV 314
ARVLYDGETGRSRGYGFVCYSTK EM+ ALESLNGVELEGRA+RV
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRV 275
Score = 62.8 bits (151), Expect = 8e-08
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +S S L + YG+ VLY+ +TGRSRG+ FV S+ E+ +E+
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 172 LDGSEYGGRTLRVNFS 187
>ref|XP_004247794.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 281
Score = 187 bits (476), Expect = 2e-45
Identities = 91/112 (81%), Positives = 101/112 (90%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG E+ GRTL+VNFSDKPKPKEPLYPETEHKLFVGNLAWSV+SESL Q F +YG VVG
Sbjct: 169 NLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGTVVG 228
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFV + T+EEME AL +LNGVEL+GRALRVSLA G++
Sbjct: 229 ARVLYDGETGRSRGYGFVSFETREEMENALNNLNGVELDGRALRVSLAQGKK 280
Score = 59.7 bits (143), Expect = 7e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL + S L + Y + VLYD +TG+SRG+ FV ST E+ + +E+
Sbjct: 110 KLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVTMSTLEDCKTVVEN 169
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 170 LDGREYGGRTLRVNFS 185
>ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 187 bits (475), Expect = 2e-45
Identities = 90/112 (80%), Positives = 99/112 (88%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG EF GRTL+VNFS KPKPKEPLYPETEHKLFVGNL+WSVT+E L Q F +YG VVG
Sbjct: 170 NLDGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVG 229
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFVCYST+ EME A+ +LN VELEGRA+RVSLA G+R
Sbjct: 230 ARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLAQGKR 281
Score = 63.5 bits (153), Expect = 5e-08
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +SV S L + YG+ VLYD ++G+SRG+ FV S E+ +E+
Sbjct: 111 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDSGKSRGFAFVTMSCIEDCNAVIEN 170
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 171 LDGKEFLGRTLRVNFS 186
>ref|XP_006340961.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like, partial
[Solanum tuberosum]
Length = 278
Score = 187 bits (474), Expect = 3e-45
Identities = 91/112 (81%), Positives = 101/112 (90%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG E+ GRTL+VNFSDKPKPKEPLYPETEHKLFVGNLAWSV+SESL Q F +YG VVG
Sbjct: 166 NLDGREYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLAWSVSSESLAQAFQEYGAVVG 225
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFV + T+EEME AL +LNGVEL+GRALRVSLA G++
Sbjct: 226 ARVLYDGETGRSRGYGFVSFETREEMENALNNLNGVELDGRALRVSLAEGKK 277
Score = 58.2 bits (139), Expect = 2e-06
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL + S L + Y + VLYD +TG+SRG+ FV S+ E+ + +E+
Sbjct: 107 KLYFGNLPYLCDSAQLAGIVQDYASPELVEVLYDRDTGKSRGFAFVTMSSLEDCKTVVEN 166
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 167 LDGREYGGRTLRVNFS 182
>ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| RNA-binding protein RNP1
precursor [Populus trichocarpa]
Length = 279
Score = 186 bits (473), Expect = 4e-45
Identities = 90/113 (79%), Positives = 101/113 (89%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLD S++ GR L+VNFSD PKPKEPLYPETE+KLFVGNL+WS TSESL Q F +YGNVVG
Sbjct: 167 NLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSESLTQAFQEYGNVVG 226
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRRN 290
ARVLYDGETG+SRGYGFVCYSTK EM+ AL SL+GVELEGRALRVSLA GR++
Sbjct: 227 ARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLAEGRKS 279
Score = 60.1 bits (144), Expect = 5e-07
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++V S L + +YG+ VLY ETGRSRG+ FV S+ E+ +E+
Sbjct: 108 KLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIEDCNAVIEN 167
Query: 352 LNGVELEGRALRVSLA 305
L+ + GR LRV+ +
Sbjct: 168 LDESQYMGRILRVNFS 183
>ref|XP_007145349.1| hypothetical protein PHAVU_007G231600g [Phaseolus vulgaris]
gi|558629|emb|CAA57551.1| chloroplast RNA binding
protein [Phaseolus vulgaris] gi|561018539|gb|ESW17343.1|
hypothetical protein PHAVU_007G231600g [Phaseolus
vulgaris]
Length = 287
Score = 186 bits (473), Expect = 4e-45
Identities = 90/112 (80%), Positives = 100/112 (89%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG E+ GRTL+VNFS+KPK KEPLYPETEHKLFVGNL+WSVT+E L Q F +YG VVG
Sbjct: 173 NLDGKEYLGRTLRVNFSNKPKAKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVG 232
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFVC+STKEEME AL +LN VELEGRA+RVSLA G+R
Sbjct: 233 ARVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVELEGRAMRVSLAEGKR 284
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/76 (43%), Positives = 46/76 (60%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL +SV S L + YG+ VLYD +TG+SRG+ FV S E+ +E+
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173
Query: 352 LNGVELEGRALRVSLA 305
L+G E GR LRV+ +
Sbjct: 174 LDGKEYLGRTLRVNFS 189
>ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein
RNP1 precursor [Oryza sativa Japonica Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein
RNP1 precursor [Oryza sativa Japonica Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa
Japonica Group] gi|125584133|gb|EAZ25064.1| hypothetical
protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 316
Score = 185 bits (470), Expect = 8e-45
Identities = 87/112 (77%), Positives = 101/112 (90%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGS + GRT++VNF+DKPKPK PLYPETEHKLFVGNL+W+VTSE L +MF + GNVVG
Sbjct: 205 NLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVG 264
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFVCYSTKEEM+ AL SLNG ELEGR +RV+LA+G++
Sbjct: 265 ARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLALGKK 316
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++ S L + Y VLYD TGRSRG+ FV ST E+ E +++
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 205
Query: 352 LNGVELEGRALRVSLA 305
L+G GR +RV+ A
Sbjct: 206 LDGSLYSGRTMRVNFA 221
>gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 185 bits (470), Expect = 8e-45
Identities = 89/112 (79%), Positives = 99/112 (88%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NL+G EF GRTL+VNFS KPKPKEPLYPETEHKLFVGNL+WSVT+E L Q F +YG VVG
Sbjct: 13 NLNGKEFLGRTLRVNFSSKPKPKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVG 72
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFVCYST+ EME A+ +LN VELEGRA+RVSLA G+R
Sbjct: 73 ARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLAQGKR 124
>gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 185 bits (470), Expect = 8e-45
Identities = 87/112 (77%), Positives = 101/112 (90%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDGS + GRT++VNF+DKPKPK PLYPETEHKLFVGNL+W+VTSE L +MF + GNVVG
Sbjct: 207 NLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVG 266
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETGRSRGYGFVCYSTKEEM+ AL SLNG ELEGR +RV+LA+G++
Sbjct: 267 ARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLALGKK 318
Score = 58.5 bits (140), Expect = 2e-06
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = -1
Query: 532 KLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEVALES 353
KL+ GNL ++ S L + Y VLYD TGRSRG+ FV ST E+ E +++
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKN 207
Query: 352 LNGVELEGRALRVSLA 305
L+G GR +RV+ A
Sbjct: 208 LDGSLYSGRTMRVNFA 223
>ref|XP_004497803.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cicer
arietinum]
Length = 371
Score = 184 bits (468), Expect = 1e-44
Identities = 89/112 (79%), Positives = 99/112 (88%)
Frame = -1
Query: 628 NLDGSEFCGRTLKVNFSDKPKPKEPLYPETEHKLFVGNLAWSVTSESLIQMFLQYGNVVG 449
NLDG+EF GRTL+VNFSDKPKPKEPLYPETE+KLFVGNL+W+VTSESL Q F +YG VVG
Sbjct: 260 NLDGNEFLGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWTVTSESLTQAFQEYGTVVG 319
Query: 448 ARVLYDGETGRSRGYGFVCYSTKEEMEVALESLNGVELEGRALRVSLAIGRR 293
ARVLYDGETG+SRGYGFV Y +K EME AL +N VELEGRALRVSLA G+R
Sbjct: 320 ARVLYDGETGKSRGYGFVSYGSKSEMEAALSYMNNVELEGRALRVSLAQGKR 371
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = -1
Query: 544 ETEHKLFVGNLAWSVTSESLIQMFLQYGNVVGARVLYDGETGRSRGYGFVCYSTKEEMEV 365
+T KL+ GNL +SV S L + YG+ VLYD +TG+SRG+ FV S E+ +
Sbjct: 197 DTRTKLYFGNLPYSVDSAQLAGLIEDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCKA 256
Query: 364 ALESLNGVELEGRALRVSLA 305
+E+L+G E GR LRV+ +
Sbjct: 257 VIENLDGNEFLGRTLRVNFS 276