BLASTX nr result

ID: Cocculus22_contig00005882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005882
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]    72   5e-20
ref|XP_002534720.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    76   4e-12

>emb|CAN65986.1| hypothetical protein VITISV_042143 [Vitis vinifera]
          Length = 138

 Score = 72.4 bits (176), Expect(2) = 5e-20
 Identities = 38/58 (65%), Positives = 40/58 (68%)
 Frame = +1

Query: 1   KSNVHRPGE*GCSSVDRSSGLIGGGITPFSKEPYVTLSRHTAPSRNQDPSFPLTNGSS 174
           +SNVH PG               GGITPFSKEPYVTLSRHTAPSRN+D  FPLTNGSS
Sbjct: 13  ESNVHGPG---------------GGITPFSKEPYVTLSRHTAPSRNKDLPFPLTNGSS 55



 Score = 50.8 bits (120), Expect(2) = 5e-20
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 194 PFHSFID*FKVALACFQVQALAVEASRQKRTSGPGR 301
           PF+S      VA+ACFQVQALAVEASRQK TSGPGR
Sbjct: 61  PFYS-----SVAVACFQVQALAVEASRQKLTSGPGR 91


>ref|XP_002534720.1| conserved hypothetical protein [Ricinus communis]
           gi|223524693|gb|EEF27662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/49 (91%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
 Frame = +3

Query: 33  MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGSVPESG-PLLSFDQRVLE 176
           MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGS PESG P  SFDQRVLE
Sbjct: 1   MQLRGPLVGPDRWWYHTLLKGTVRDTLASYGSAPESGPPPFSFDQRVLE 49


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -1

Query: 116 RESVTYGSFEKGVIPPPIRPDERSTELHPYSPGLCTLL 3
           RE++TYGSFEKGV PPPIRPDERSTELHPYSPG CTLL
Sbjct: 880 RENLTYGSFEKGVRPPPIRPDERSTELHPYSPGPCTLL 917


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