BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005654
         (304 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    60   4e-07
ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    59   9e-07
ref|XP_007030911.1| RING/U-box superfamily protein, putative iso...    57   3e-06

>ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 433

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
 Frame = +3

Query: 24  TEQGARSDRWVFTRAPPFVSRASSVKSPKI--TDGEGSTRGNSRNFVTSVKTP-FDCIGS 194
           +E   +SDRW+FT APPF SR SS+KSP++    GEGST G+ R   T+VK P F C+  
Sbjct: 360 SEPEPKSDRWIFTMAPPFFSRGSSMKSPRVGAEAGEGSTSGSLR---TAVKLPSFKCLEP 416

Query: 195 KAAGTSQEEDATAHLPV 245
           K    S     +A  PV
Sbjct: 417 KGDEASLMSTDSARPPV 433


>ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 432

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +3

Query: 24  TEQGARSDRWVFTRAPPFVSRASSVKSPKI--TDGEGSTRGNSRNFVTSVKTP-FDCIGS 194
           +E   +SDRW+FT  PPF SR SS+KSP++    GEGST G+ R   T+VK P F C+  
Sbjct: 359 SEPEPKSDRWIFTMTPPFFSRGSSMKSPRVGAEAGEGSTSGSMR---TAVKLPSFKCLEP 415

Query: 195 KAAGTSQEEDATAHLPV 245
           K    S     +A  PV
Sbjct: 416 KGDEASLMSTDSARPPV 432


>ref|XP_007030911.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|590643833|ref|XP_007030912.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508719516|gb|EOY11413.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao] gi|508719517|gb|EOY11414.1| RING/U-box
           superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 2/40 (5%)
 Frame = +3

Query: 21  RTEQGARSDRWVFTRAPPFVSRASSVKSPKI--TDGEGST 134
           R +QG +SDRWVF+  PPF SRASS+KSPK+   DGEGS+
Sbjct: 327 RLDQGVKSDRWVFSMTPPFFSRASSMKSPKVAANDGEGSS 366