BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005592
         (369 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citr...    74   2e-11
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ...    59   1e-08
ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicag...    57   2e-06

>ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
           gi|557547807|gb|ESR58767.1| hypothetical protein
           CICLE_v10004111mg [Citrus clementina]
          Length = 58

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/50 (74%), Positives = 37/50 (74%)
 Frame = +1

Query: 7   T*ESTPRKLCYIRNCPFPLIGIGTNKNGWDNKHPSRSYFGYSYNHRRLLK 156
           T ES  RKLCY    P  L GIGT KNGWDNKHPSRSY GY YNHRRLLK
Sbjct: 11  TPESATRKLCY--KLPPFLSGIGTKKNGWDNKHPSRSYCGYPYNHRRLLK 58


>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251116|gb|AEC06210.1| uncharacterized protein
           AT2G12905 [Arabidopsis thaliana]
          Length = 72

 Score = 59.3 bits (142), Expect(2) = 1e-08
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 55  FPLIGIGTNKNGWDNKHPSRSYFGYSYNH 141
           F  +GIGTN+NGW+NKHPSRSYFGY YNH
Sbjct: 44  FFFVGIGTNQNGWNNKHPSRSYFGYPYNH 72



 Score = 25.8 bits (55), Expect(2) = 1e-08
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 2  TTPRNQHHENFV 37
          TTPRNQ H+NF+
Sbjct: 25 TTPRNQQHKNFL 36


>ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
           gi|358344504|ref|XP_003636329.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|358349399|ref|XP_003638725.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355493700|gb|AES74903.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355502264|gb|AES83467.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355504660|gb|AES85863.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
          Length = 66

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = +1

Query: 85  NGWDNKHPSRSYFGYSYNHRRLLK 156
           NGWDNKHPSRSYFGY YNHRRLLK
Sbjct: 43  NGWDNKHPSRSYFGYPYNHRRLLK 66