BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005587
         (619 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   322   7e-87
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              322   7e-87
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   319   2e-86
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...   319   2e-86
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...   319   2e-86
ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago trunca...   318   3e-86
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   316   2e-85
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   315   2e-85
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP...   319   5e-85
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   313   1e-84
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer...   313   1e-84
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   305   1e-82
ref|XP_004517217.1| PREDICTED: probable DNA-directed RNA polymer...   305   1e-82
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...   304   5e-82
gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partia...   306   5e-82
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   305   1e-81
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   301   1e-81
ref|XP_007010836.1| DNA-directed RNA polymerase isoform 1 [Theob...   301   1e-81
ref|XP_007224992.1| hypothetical protein PRUPE_ppa020507mg [Prun...   304   1e-81
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   302   2e-81

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  322 bits (825), Expect(2) = 7e-87
 Identities = 157/194 (80%), Positives = 176/194 (90%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            LSVL GIGMTP+LPK+V+AGPPEVLSV+LDG V+GSI S  VE AV+HLRRLK+S +S I
Sbjct: 506  LSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVI 565

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGY+PLS GGAYPGLYLFTSPSRF+RPVRNIS+PS+   +IELIGPFEQ YMEIR
Sbjct: 566  PDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIR 625

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDG +GGRR+ FPATHEEIHPTG+LSVVA+LTP+SDHNQSPRNMYQCQM KQTMAFSSQ
Sbjct: 626  CPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQ 685

Query: 78   AIQFRADQKLYHLQ 37
            AI  RADQKLYHLQ
Sbjct: 686  AINCRADQKLYHLQ 699



 Score = 25.4 bits (54), Expect(2) = 7e-87
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAY+
Sbjct: 721 TGTNAIVAVLAYS 733


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  322 bits (825), Expect(2) = 7e-87
 Identities = 157/194 (80%), Positives = 176/194 (90%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            LSVL GIGMTP+LPK+V+AGPPEVLSV+LDG V+GSI S  VE AV+HLRRLK+S +S I
Sbjct: 499  LSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVI 558

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGY+PLS GGAYPGLYLFTSPSRF+RPVRNIS+PS+   +IELIGPFEQ YMEIR
Sbjct: 559  PDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIR 618

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDG +GGRR+ FPATHEEIHPTG+LSVVA+LTP+SDHNQSPRNMYQCQM KQTMAFSSQ
Sbjct: 619  CPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQ 678

Query: 78   AIQFRADQKLYHLQ 37
            AI  RADQKLYHLQ
Sbjct: 679  AINCRADQKLYHLQ 692



 Score = 25.4 bits (54), Expect(2) = 7e-87
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAY+
Sbjct: 714 TGTNAIVAVLAYS 726


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  319 bits (817), Expect(2) = 2e-86
 Identities = 153/194 (78%), Positives = 173/194 (89%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L VL G+GM PSLPK+V++GPP VLSVLLDG V+G I S  +EK V+HLRRLK+S  S I
Sbjct: 537  LRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVI 596

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GGAYPGLYLFTSP +F+RPVRNIS+PS+ S NIELIGPFEQ +MEIR
Sbjct: 597  PDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIR 656

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGRR+ FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTM FS Q
Sbjct: 657  CPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQ 716

Query: 78   AIQFRADQKLYHLQ 37
            A++FRADQKLYHLQ
Sbjct: 717  ALKFRADQKLYHLQ 730



 Score = 26.9 bits (58), Expect(2) = 2e-86
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 752 TGTNAIVAVLAYT 764


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  319 bits (817), Expect(2) = 2e-86
 Identities = 153/194 (78%), Positives = 173/194 (89%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L VL G+GM PSLPK+V++GPP VLSVLLDG V+G I S  +EK V+HLRRLK+S  S I
Sbjct: 444  LRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVI 503

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GGAYPGLYLFTSP +F+RPVRNIS+PS+ S NIELIGPFEQ +MEIR
Sbjct: 504  PDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIR 563

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGRR+ FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTM FS Q
Sbjct: 564  CPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQ 623

Query: 78   AIQFRADQKLYHLQ 37
            A++FRADQKLYHLQ
Sbjct: 624  ALKFRADQKLYHLQ 637



 Score = 26.9 bits (58), Expect(2) = 2e-86
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 659 TGTNAIVAVLAYT 671


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Citrus sinensis]
          Length = 954

 Score =  319 bits (817), Expect(2) = 2e-86
 Identities = 153/194 (78%), Positives = 173/194 (89%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L VL G+GM PSLPK+V++GPP VLSVLLDG V+G I S  +EK V+HLRRLK+S  S I
Sbjct: 537  LRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVI 596

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GGAYPGLYLFTSP +F+RPVRNIS+PS+ S NIELIGPFEQ +MEIR
Sbjct: 597  PDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIR 656

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGRR+ FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTM FS Q
Sbjct: 657  CPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQ 716

Query: 78   AIQFRADQKLYHLQ 37
            A++FRADQKLYHLQ
Sbjct: 717  ALKFRADQKLYHLQ 730



 Score = 26.9 bits (58), Expect(2) = 2e-86
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 752 TGTNAIVAVLAYT 764


>ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355510939|gb|AES92081.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1341

 Score =  318 bits (815), Expect(2) = 3e-86
 Identities = 152/194 (78%), Positives = 172/194 (88%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L++L  IGMT SLPKI   GPPEVL+VLLDGC++G I S  VEK V+H+R LK+S  + I
Sbjct: 574  LNILIEIGMTQSLPKIFLPGPPEVLTVLLDGCIVGYIPSTEVEKVVAHIRELKVSSAAVI 633

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GGAYPGLYLFTSPSRF+RPVRN+S+PS+G+ NIELIGPFEQ +MEIR
Sbjct: 634  PDDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNLSIPSNGNENIELIGPFEQVFMEIR 693

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGR+  FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ
Sbjct: 694  CPDGGDGGRKSSFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ 753

Query: 78   AIQFRADQKLYHLQ 37
             IQ RADQKLYHLQ
Sbjct: 754  TIQHRADQKLYHLQ 767



 Score = 26.9 bits (58), Expect(2) = 3e-86
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 789 TGTNAIVAVLAYT 801


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  316 bits (809), Expect(2) = 2e-85
 Identities = 153/194 (78%), Positives = 172/194 (88%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L VLT +GMT SLPK+V+AGPP+VLSVLLDG V+GSI S  VEK V HLRRLK++  S I
Sbjct: 522  LGVLTSLGMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVI 581

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GGA+PGLYLFTSPSRF+RPV+NIS+P+    NIELIGPFEQ +MEIR
Sbjct: 582  PDDLEVGYVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIR 641

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGGNGGR D FPATHEEIHPT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 642  CPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 701

Query: 78   AIQFRADQKLYHLQ 37
            +++FRADQKLYHLQ
Sbjct: 702  SLRFRADQKLYHLQ 715



 Score = 26.9 bits (58), Expect(2) = 2e-85
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 737 TGTNAIVAVLAYT 749


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  315 bits (808), Expect(2) = 2e-85
 Identities = 152/194 (78%), Positives = 171/194 (88%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L+VL  +GMTPSLPKI   GPPE L+VLLDGCV+G I+S  VEK V+H+R LK+S ++ I
Sbjct: 537  LNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVI 596

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+D+EVGYVPLS GGAYPGLYL TSPSRF+RPVRNIS+ SDGS NIELIGPFEQ +MEIR
Sbjct: 597  PDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIR 656

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGR+  FPATHEEIHPT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ
Sbjct: 657  CPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ 716

Query: 78   AIQFRADQKLYHLQ 37
             IQ RADQKLYHLQ
Sbjct: 717  TIQHRADQKLYHLQ 730



 Score = 26.9 bits (58), Expect(2) = 2e-85
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 752 TGTNAIVAVLAYT 764


>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
          Length = 1243

 Score =  319 bits (817), Expect = 5e-85
 Identities = 151/194 (77%), Positives = 172/194 (88%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            LSVL  +GM+PSLPK+V+AGPPEVLSVLLDG ++GSISS ++EK V+HLRRLK+SP S I
Sbjct: 539  LSVLVEVGMSPSLPKLVQAGPPEVLSVLLDGRIVGSISSSVIEKVVAHLRRLKVSPASEI 598

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GG YPGLYLFTSP RF+RPV+NIS+PS    NIELIGPFEQ +MEI+
Sbjct: 599  PDDLEVGYVPLSMGGTYPGLYLFTSPCRFVRPVKNISIPSTDDQNIELIGPFEQVFMEIK 658

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGRRD FPATHEEIHPTG+LSVVANL P+ +HNQSPRNMYQCQMAKQTM FS Q
Sbjct: 659  CPDGGDGGRRDSFPATHEEIHPTGMLSVVANLIPWPNHNQSPRNMYQCQMAKQTMGFSLQ 718

Query: 78   AIQFRADQKLYHLQ 37
            A+  RADQKLYHLQ
Sbjct: 719  ALHCRADQKLYHLQ 732


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score =  313 bits (801), Expect(2) = 1e-84
 Identities = 150/194 (77%), Positives = 169/194 (87%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L+VL  +GMTPSLPKI   GPPE L+VLLDGCV+G I+S   EK V+H+R LK+S  + I
Sbjct: 537  LNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVI 596

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+D+EVGYVPLS GGAYPGLYL TSPSRF+RPVRNIS+PS+GS NIE IGPFEQ +MEIR
Sbjct: 597  PDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIR 656

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGR+  FPATHEEIHPT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ
Sbjct: 657  CPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ 716

Query: 78   AIQFRADQKLYHLQ 37
             IQ RADQKLYHLQ
Sbjct: 717  TIQHRADQKLYHLQ 730



 Score = 26.9 bits (58), Expect(2) = 1e-84
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 752 TGTNAIVAVLAYT 764


>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X2 [Glycine max]
          Length = 1004

 Score =  313 bits (801), Expect(2) = 1e-84
 Identities = 150/194 (77%), Positives = 169/194 (87%)
 Frame = -2

Query: 618 LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
           L+VL  +GMTPSLPKI   GPPE L+VLLDGCV+G I+S   EK V+H+R LK+S  + I
Sbjct: 366 LNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVI 425

Query: 438 PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
           P+D+EVGYVPLS GGAYPGLYL TSPSRF+RPVRNIS+PS+GS NIE IGPFEQ +MEIR
Sbjct: 426 PDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIR 485

Query: 258 CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
           CPDGG+GGR+  FPATHEEIHPT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ
Sbjct: 486 CPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ 545

Query: 78  AIQFRADQKLYHLQ 37
            IQ RADQKLYHLQ
Sbjct: 546 TIQHRADQKLYHLQ 559



 Score = 26.9 bits (58), Expect(2) = 1e-84
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 581 TGTNAIVAVLAYT 593


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score =  305 bits (782), Expect(2) = 1e-82
 Identities = 147/194 (75%), Positives = 166/194 (85%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L++L  IGMT SLPKI   GPPEVL+VLLDGC++G I S  VEK V+H+R LK+S  + I
Sbjct: 543  LNILVEIGMTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVI 602

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P D+EVGYVPLS GGAYPGLYLFTSPSRF+RPVRN+S+PS    N+ELIGPFEQ +MEIR
Sbjct: 603  PNDMEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPSTNE-NVELIGPFEQVFMEIR 661

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGR+  FPATHEEIHPTG+LSVV NLTP+SDHNQSPRNMYQCQMAKQTM FSSQ
Sbjct: 662  CPDGGDGGRKSPFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQ 721

Query: 78   AIQFRADQKLYHLQ 37
             IQ RADQKLYHLQ
Sbjct: 722  TIQHRADQKLYHLQ 735



 Score = 28.1 bits (61), Expect(2) = 1e-82
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           SGTNAIVAVLAYT
Sbjct: 757 SGTNAIVAVLAYT 769


>ref|XP_004517217.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cicer arietinum]
          Length = 369

 Score =  305 bits (782), Expect(2) = 1e-82
 Identities = 147/194 (75%), Positives = 166/194 (85%)
 Frame = -2

Query: 618 LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
           L++L  IGMT SLPKI   GPPEVL+VLLDGC++G I S  VEK V+H+R LK+S  + I
Sbjct: 28  LNILVEIGMTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVI 87

Query: 438 PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
           P D+EVGYVPLS GGAYPGLYLFTSPSRF+RPVRN+S+PS    N+ELIGPFEQ +MEIR
Sbjct: 88  PNDMEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPSTNE-NVELIGPFEQVFMEIR 146

Query: 258 CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
           CPDGG+GGR+  FPATHEEIHPTG+LSVV NLTP+SDHNQSPRNMYQCQMAKQTM FSSQ
Sbjct: 147 CPDGGDGGRKSPFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQ 206

Query: 78  AIQFRADQKLYHLQ 37
            IQ RADQKLYHLQ
Sbjct: 207 TIQHRADQKLYHLQ 220



 Score = 28.1 bits (61), Expect(2) = 1e-82
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           SGTNAIVAVLAYT
Sbjct: 242 SGTNAIVAVLAYT 254


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  304 bits (779), Expect(2) = 5e-82
 Identities = 147/192 (76%), Positives = 167/192 (86%)
 Frame = -2

Query: 612  VLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGIPE 433
            +L  +GMT SLPKI   GPPE L+VLLDGCV+G I+S  VEK V+++R LK+S  S IP 
Sbjct: 539  ILMEVGMTSSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPG 598

Query: 432  DLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIRCP 253
            D+EVGYVPLS GGAYPGLYLFTSPSRF+RPV+NIS+PS+GS +IELIGPFEQ +MEIRC 
Sbjct: 599  DMEVGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCL 658

Query: 252  DGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAI 73
            DGG+GGR+  FPATHEEIHPT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFSSQ I
Sbjct: 659  DGGDGGRKSSFPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTI 718

Query: 72   QFRADQKLYHLQ 37
            Q RADQKLYHLQ
Sbjct: 719  QHRADQKLYHLQ 730



 Score = 26.9 bits (58), Expect(2) = 5e-82
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 752 TGTNAIVAVLAYT 764


>gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partial [Mimulus
           guttatus]
          Length = 1028

 Score =  306 bits (784), Expect(2) = 5e-82
 Identities = 150/192 (78%), Positives = 165/192 (85%)
 Frame = -2

Query: 612 VLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGIPE 433
           VL  IGM PSLPK+V+AGPPEVL +LLDG V+GSI+S+IV KAV+HLRRLK+S  S IPE
Sbjct: 390 VLVSIGMIPSLPKLVQAGPPEVLPILLDGRVVGSIASDIVGKAVTHLRRLKVSATSAIPE 449

Query: 432 DLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIRCP 253
           DLEVGY+PLS GGAYPGLYLFTS SRF+RPVRN  +P   S NIE IGPFEQ YMEI CP
Sbjct: 450 DLEVGYIPLSMGGAYPGLYLFTSASRFVRPVRNRLIPPGESNNIEHIGPFEQVYMEISCP 509

Query: 252 DGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQAI 73
           DGG+GGR++ FPATHEEIHPTGILSVV NLTP+SDHNQSPRNMYQCQM KQTM FS QAI
Sbjct: 510 DGGDGGRKNVFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQAI 569

Query: 72  QFRADQKLYHLQ 37
             RADQKLYHLQ
Sbjct: 570 NCRADQKLYHLQ 581



 Score = 25.0 bits (53), Expect(2) = 5e-82
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 37  GTNAIVAVLAYT 2
           GTNAIVAVLAY+
Sbjct: 604 GTNAIVAVLAYS 615


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score =  305 bits (780), Expect(2) = 1e-81
 Identities = 147/194 (75%), Positives = 166/194 (85%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L+VL  IGMTPS PK+V+AGPPE+LSVLLDG + G I S+++EKAV+HLRRLKLS  S I
Sbjct: 552  LNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSI 611

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P DLEVGY+PLS  GAYPGLYLFTSPSRF+RPVRNIS P++   ++ELIGPFEQ YMEI 
Sbjct: 612  PVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEIS 671

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGR+  FPATH EIHPT ILSVV NLTP+SDHNQSPRNMYQCQM KQTM FSSQ
Sbjct: 672  CPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQ 731

Query: 78   AIQFRADQKLYHLQ 37
            A+  RADQKLYHLQ
Sbjct: 732  ALNCRADQKLYHLQ 745



 Score = 25.0 bits (53), Expect(2) = 1e-81
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 37  GTNAIVAVLAYT 2
           GTNAIVAVLAY+
Sbjct: 768 GTNAIVAVLAYS 779


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  301 bits (772), Expect(2) = 1e-81
 Identities = 149/194 (76%), Positives = 164/194 (84%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            L VL G+GMT S PK+  AGPP+VL VLLDG V+GS+ S   EK V+HLRRLKL+  S I
Sbjct: 544  LDVLVGVGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVI 603

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS GG YPGLYLFTSPSRF+RPVRNIS+PS    +IELIGPFEQ +MEIR
Sbjct: 604  PDDLEVGYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIR 663

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGGNGGR + FPATHEEI PT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 664  CPDGGNGGRSNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 723

Query: 78   AIQFRADQKLYHLQ 37
            AI  RADQKLYHLQ
Sbjct: 724  AINARADQKLYHLQ 737



 Score = 28.1 bits (61), Expect(2) = 1e-81
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           SGTNAIVAVLAYT
Sbjct: 759 SGTNAIVAVLAYT 771


>ref|XP_007010836.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
           gi|508727749|gb|EOY19646.1| DNA-directed RNA polymerase
           isoform 1 [Theobroma cacao]
          Length = 1074

 Score =  301 bits (772), Expect(2) = 1e-81
 Identities = 149/194 (76%), Positives = 164/194 (84%)
 Frame = -2

Query: 618 LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
           L VL G+GMT S PK+  AGPP+VL VLLDG V+GS+ S   EK V+HLRRLKL+  S I
Sbjct: 417 LDVLVGVGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVI 476

Query: 438 PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
           P+DLEVGYVPLS GG YPGLYLFTSPSRF+RPVRNIS+PS    +IELIGPFEQ +MEIR
Sbjct: 477 PDDLEVGYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIR 536

Query: 258 CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
           CPDGGNGGR + FPATHEEI PT +LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 537 CPDGGNGGRSNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 596

Query: 78  AIQFRADQKLYHLQ 37
           AI  RADQKLYHLQ
Sbjct: 597 AINARADQKLYHLQ 610



 Score = 28.1 bits (61), Expect(2) = 1e-81
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           SGTNAIVAVLAYT
Sbjct: 632 SGTNAIVAVLAYT 644


>ref|XP_007224992.1| hypothetical protein PRUPE_ppa020507mg [Prunus persica]
           gi|462421928|gb|EMJ26191.1| hypothetical protein
           PRUPE_ppa020507mg [Prunus persica]
          Length = 1037

 Score =  304 bits (778), Expect(2) = 1e-81
 Identities = 148/194 (76%), Positives = 172/194 (88%)
 Frame = -2

Query: 618 LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
           L+VL+ + M  S+PK+V+AGPP  LSVLLDGCV+GSISS++VEK V+ LR+LK+S  S I
Sbjct: 408 LTVLSELQMISSVPKLVQAGPPANLSVLLDGCVVGSISSKVVEKVVAQLRKLKVSASSVI 467

Query: 438 PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
           P+DLEVGYVPLS  GAYPGLYLFTSPSRF+RPV+NIS+PSD   NIELIGPFEQ +MEIR
Sbjct: 468 PDDLEVGYVPLSSRGAYPGLYLFTSPSRFVRPVKNISIPSDEGQNIELIGPFEQVFMEIR 527

Query: 258 CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
           CPDG +GGR+D FPATHEEIHPTG+LSVVA+LTP+SDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 528 CPDGRDGGRKDAFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 587

Query: 78  AIQFRADQKLYHLQ 37
           A+  RADQKLYHL+
Sbjct: 588 ALCNRADQKLYHLK 601



 Score = 25.8 bits (55), Expect(2) = 1e-81
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVL+YT
Sbjct: 623 TGTNAIVAVLSYT 635


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  302 bits (773), Expect(2) = 2e-81
 Identities = 146/194 (75%), Positives = 169/194 (87%)
 Frame = -2

Query: 618  LSVLTGIGMTPSLPKIVRAGPPEVLSVLLDGCVIGSISSEIVEKAVSHLRRLKLSPLSGI 439
            LSVL  +GM PSLPK+V+ G P+ L+VLLDG ++G ISS  VEK V+HLRRLK+     I
Sbjct: 537  LSVLIAVGMIPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVI 596

Query: 438  PEDLEVGYVPLSFGGAYPGLYLFTSPSRFLRPVRNISVPSDGSLNIELIGPFEQAYMEIR 259
            P+DLEVGYVPLS  GAYPGLYLFTSPSRF+RPV+N+S+  + + NIELIGPFEQ +MEIR
Sbjct: 597  PDDLEVGYVPLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIR 656

Query: 258  CPDGGNGGRRDGFPATHEEIHPTGILSVVANLTPFSDHNQSPRNMYQCQMAKQTMAFSSQ 79
            CPDGG+GGR+D FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTMAFS Q
Sbjct: 657  CPDGGDGGRKDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQ 716

Query: 78   AIQFRADQKLYHLQ 37
            AI++RADQKLYHLQ
Sbjct: 717  AIRYRADQKLYHLQ 730



 Score = 26.9 bits (58), Expect(2) = 2e-81
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -1

Query: 40  SGTNAIVAVLAYT 2
           +GTNAIVAVLAYT
Sbjct: 752 TGTNAIVAVLAYT 764