BLASTX nr result
ID: Cocculus22_contig00005540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00005540
(1260 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 226 2e-56
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 217 1e-53
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 201 4e-49
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 200 9e-49
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 200 1e-48
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 198 4e-48
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 198 4e-48
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 198 4e-48
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 198 5e-48
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 197 6e-48
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 190 1e-45
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 189 2e-45
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 189 2e-45
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 189 2e-45
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 186 2e-44
ref|XP_002312652.1| RNA recognition motif-containing family prot... 179 2e-42
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 174 7e-41
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 172 4e-40
ref|XP_002315647.1| RNA recognition motif-containing family prot... 171 6e-40
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 156 2e-35
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 226 bits (575), Expect = 2e-56
Identities = 120/245 (48%), Positives = 130/245 (53%), Gaps = 2/245 (0%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GGLMHPQ MMG+GFDPTY VNT+
Sbjct: 403 YGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTM 462
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF HHA MW DTSMGGWG ++ RTRE
Sbjct: 463 GLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESS 522
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKE 616
E +HE+ GRS A REK+R SERDWSGNSERRHRDEREQDWERSDK+
Sbjct: 523 YGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKD 582
Query: 617 RRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGKRR 796
RYR+EKDGYR+HRQRE DYGKRR
Sbjct: 583 HRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 642
Query: 797 RLPSE 811
RLPSE
Sbjct: 643 RLPSE 647
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 217 bits (552), Expect = 1e-53
Identities = 116/249 (46%), Positives = 131/249 (52%), Gaps = 6/249 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GG+M+PQ MMGAGFDPTY VNT+
Sbjct: 382 YGQGLAGPGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTM 441
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF HHA MW D SMGGWG D+ RTRE
Sbjct: 442 GLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRESS 501
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
EA+HE+GGRS A RE++R SERDWSGNSERRHRDEREQDW+RS+
Sbjct: 502 YGGDDGASEYGYGEANHEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSERG 561
Query: 611 --KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDY 784
+E RY++EKD YR+HRQRE +DY
Sbjct: 562 EHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDY 621
Query: 785 GKRRRLPSE 811
GKRRRLPSE
Sbjct: 622 GKRRRLPSE 630
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 201 bits (512), Expect = 4e-49
Identities = 110/247 (44%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGPA GGP G ++ PQ+MM AGFDPTY VN +
Sbjct: 398 YGQGLAGPAFGGPAGAMLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAM 457
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDGR-TREXXX 439
L GVAPHVNPAFF +A MW DTSMGGWG + GR TRE
Sbjct: 458 GLAGVAPHVNPAFFGRGMAPNGMGMMGPSGMDGPNAGMWSDTSMGGWGEEPGRRTRESSY 517
Query: 440 XXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD--- 610
E +HE+G RS+AA REK+R+SERDWSGNS+RRHRD+RE DW+RS+
Sbjct: 518 GGDDGASEYGYGEVNHEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREH 577
Query: 611 KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGK 790
KE RYR+EK+ YR+HRQRE DYGK
Sbjct: 578 KEHRYREEKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGK 637
Query: 791 RRRLPSE 811
RRRLPSE
Sbjct: 638 RRRLPSE 644
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 200 bits (509), Expect = 9e-49
Identities = 108/244 (44%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG+AGPA GGP GG+MH Q MMGAGFDP Y VN++
Sbjct: 348 YGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSM 407
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDGR-TREXXX 439
L GVAPHVNPAFF + W DTSMGGWG + GR TRE
Sbjct: 408 GLAGVAPHVNPAFFARGMAPNGMGMMASSGMEGPNPGKWPDTSMGGWGEEPGRRTRESSY 467
Query: 440 XXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKER 619
E +HE+G RS+ A REK+R SERDWSGNS+RRHRDEREQDW+RS++E
Sbjct: 468 DGDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREP 527
Query: 620 RYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGKRRR 799
+YR+EKD YR HRQRE +DYGKRRR
Sbjct: 528 KYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRR 587
Query: 800 LPSE 811
PSE
Sbjct: 588 PPSE 591
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 200 bits (508), Expect = 1e-48
Identities = 110/248 (44%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG AGP GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTL 466
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF H MW DTSMGGWG D+ RTRE
Sbjct: 467 GLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESS 526
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
+A+HE+G RS+ A REK+R S+R+WSGNS+RRHRDE+E+DW+RS+
Sbjct: 527 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSDREWSGNSDRRHRDEKERDWDRSERE 585
Query: 611 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
+E RYR+EKD YREHR RE +DYG
Sbjct: 586 HREHRYREEKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYG 645
Query: 788 KRRRLPSE 811
KRRRLPSE
Sbjct: 646 KRRRLPSE 653
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 198 bits (504), Expect = 4e-48
Identities = 111/248 (44%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 409 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 467
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGW-GADDGR-TREXX 436
L GVAPHVNPAFF H MW D+SMGGW G + GR TRE
Sbjct: 468 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESS 527
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
EA+HE+G RSTAA REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 528 YGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 587
Query: 611 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
++ R+R+EKD YR+ RQR+ +DYG
Sbjct: 588 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYG 647
Query: 788 KRRRLPSE 811
KRRRLPSE
Sbjct: 648 KRRRLPSE 655
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 198 bits (504), Expect = 4e-48
Identities = 111/248 (44%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 412 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 470
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGW-GADDGR-TREXX 436
L GVAPHVNPAFF H MW D+SMGGW G + GR TRE
Sbjct: 471 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESS 530
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
EA+HE+G RSTAA REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 531 YGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 590
Query: 611 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
++ R+R+EKD YR+ RQR+ +DYG
Sbjct: 591 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYG 650
Query: 788 KRRRLPSE 811
KRRRLPSE
Sbjct: 651 KRRRLPSE 658
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 198 bits (504), Expect = 4e-48
Identities = 111/248 (44%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 412 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 470
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGW-GADDGR-TREXX 436
L GVAPHVNPAFF H MW D+SMGGW G + GR TRE
Sbjct: 471 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESS 530
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
EA+HE+G RSTAA REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 531 YGGDDGASDYGYGEANHEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 590
Query: 611 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
++ R+R+EKD YR+ RQR+ +DYG
Sbjct: 591 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYG 650
Query: 788 KRRRLPSE 811
KRRRLPSE
Sbjct: 651 KRRRLPSE 658
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 198 bits (503), Expect = 5e-48
Identities = 111/248 (44%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GG+MHPQNMMG GFDPTY VN +
Sbjct: 409 YGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAM 467
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGW-GADDGR-TREXX 436
L GVAPHVNPAFF H MW D+SMGGW G + GR TRE
Sbjct: 468 GLAGVAPHVNPAFFNRGMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESS 527
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
EASHE+G RST A REKDR SERDWSGN++RRHR+EREQDW+RS+
Sbjct: 528 YGGDDGASDYGYGEASHEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERD 587
Query: 611 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
++ R+R+EKD YR+ RQR+ +DYG
Sbjct: 588 HRDHRHREEKDSYRDRRQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYG 647
Query: 788 KRRRLPSE 811
KRRRLPSE
Sbjct: 648 KRRRLPSE 655
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 197 bits (502), Expect = 6e-48
Identities = 111/248 (44%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 611 -KERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
+E RYR+EKD YREHR RE +DYG
Sbjct: 585 HREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYG 644
Query: 788 KRRRLPSE 811
K+RRLPSE
Sbjct: 645 KKRRLPSE 652
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 190 bits (483), Expect = 1e-45
Identities = 103/245 (42%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
+ QGLAGPA GGP GLMHPQ MMG GFDP++ VN +
Sbjct: 404 FGQGLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPM 463
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF H MW DTS GGWG ++ RTRE
Sbjct: 464 GLPGVAPHVNPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESS 523
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKE 616
E SH++G RS+A REK+R SERDWSGNS++RHRDERE D +R DKE
Sbjct: 524 YGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKE 583
Query: 617 RRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGKRR 796
RYR+E+DGYR++RQ+E +YGKRR
Sbjct: 584 HRYREERDGYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRR 643
Query: 797 RLPSE 811
R PSE
Sbjct: 644 RAPSE 648
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 189 bits (481), Expect = 2e-45
Identities = 101/200 (50%), Positives = 116/200 (58%), Gaps = 5/200 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 611 -KERRYRDEKDGYREHRQRE 667
+E RYR+EKD YREHR RE
Sbjct: 585 HREHRYREEKDSYREHRHRE 604
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 189 bits (481), Expect = 2e-45
Identities = 101/200 (50%), Positives = 116/200 (58%), Gaps = 5/200 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 611 -KERRYRDEKDGYREHRQRE 667
+E RYR+EKD YREHR RE
Sbjct: 585 HREHRYREEKDSYREHRHRE 604
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 189 bits (480), Expect = 2e-45
Identities = 105/249 (42%), Positives = 124/249 (49%), Gaps = 6/249 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGL GP GGP GG+M+ MMG GFDPTY VN +
Sbjct: 398 YGQGLGGPGFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAM 457
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGAD--DGRTREXX 436
L GVAPHVNPAFF HHA MW D SM GW + D RTRE
Sbjct: 458 GLAGVAPHVNPAFFGRGMATNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTRESS 517
Query: 437 XXXXXXXXXXXXX-EASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDK 613
EA+HE+ RS+AAPRE++R SER+W+G SERRHRDEREQDW+RS++
Sbjct: 518 YGGDDGGSEYGNYGEANHEKPVRSSAAPRERERESEREWTGTSERRHRDEREQDWDRSER 577
Query: 614 ER---RYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDY 784
E RY++EKD YR+HR+RE +DY
Sbjct: 578 EHREPRYKEEKDSYRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDY 637
Query: 785 GKRRRLPSE 811
GKRRRLPSE
Sbjct: 638 GKRRRLPSE 646
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 186 bits (471), Expect = 2e-44
Identities = 99/197 (50%), Positives = 114/197 (57%), Gaps = 5/197 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG GPA GGP GG+MHPQ MMGAGFDPTY VNT+
Sbjct: 407 YGQG-PGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTM 465
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDG--RTREXX 436
L GVAPHVNPAFF HA MW D SMGGWG D+ RTRE
Sbjct: 466 GLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESS 525
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSD-- 610
+A+HE+G RS+ A REK+R SER+WSGNS+RRHRDE+EQDW+RS+
Sbjct: 526 YGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSERE 584
Query: 611 -KERRYRDEKDGYREHR 658
+E RYR+EKD YREHR
Sbjct: 585 HREHRYREEKDSYREHR 601
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 179 bits (455), Expect = 2e-42
Identities = 100/243 (41%), Positives = 117/243 (48%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGPA GGP GG+M PQ MMGAGFDP Y VN++
Sbjct: 393 YGQGLAGPAFGGPAGGMMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSM 452
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDGRTREXXXX 442
L GVAPHVNPAFF + MW + G GA +
Sbjct: 453 GLAGVAPHVNPAFFARGMAPNGMGMMVSSGMDGPNPGMWESSYDGDEGASE--------- 503
Query: 443 XXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKERR 622
E +HE+G RS+ A REK+R SERDWSGNS+RRHRDEREQDW+R ++E R
Sbjct: 504 -------YGYGEGNHEKGARSSGASREKERGSERDWSGNSDRRHRDEREQDWDRPEREHR 556
Query: 623 YRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGKRRRL 802
Y++EKD YR HRQRE +DYGKRRRL
Sbjct: 557 YKEEKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRRRL 616
Query: 803 PSE 811
PSE
Sbjct: 617 PSE 619
>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
gi|548855834|gb|ERN13697.1| hypothetical protein
AMTR_s00049p00146760 [Amborella trichopoda]
Length = 659
Score = 174 bits (441), Expect = 7e-41
Identities = 99/250 (39%), Positives = 117/250 (46%), Gaps = 7/250 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXX---V 253
Y Q L+ P +GGP GGL+HPQ MMG+GFDPTY +
Sbjct: 413 YGQALSAPPLGGPPGGLLHPQGMMGSGFDPTYGAHLGRGSGYGGFSGPHFPGMLPSFSPM 472
Query: 254 NTVALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGG---WGADD-GR 421
TV L GVAPHVNPAFF HH MWGD+SMGG WG ++ GR
Sbjct: 473 GTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGAMDGHHGGMWGDSSMGGGVGWGNEEHGR 532
Query: 422 TREXXXXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWE 601
+ HERGG + REKDR SERDWS ERRHRD+R+ DW
Sbjct: 533 RTRESSYGDDGASDYGYGDGGHERGGGRSNPGREKDRGSERDWSSGPERRHRDDRDSDW- 591
Query: 602 RSDKERRYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLD 781
D++ RY+DEKDGY +HRQRE +D
Sbjct: 592 --DRDPRYKDEKDGYSDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQRSRSKDVD 649
Query: 782 YGKRRRLPSE 811
YGKRRR+PSE
Sbjct: 650 YGKRRRVPSE 659
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 172 bits (435), Expect = 4e-40
Identities = 97/248 (39%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGLAGP GGP GG+M+PQ MMG GFDPTY VNT+
Sbjct: 397 YGQGLAGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTM 456
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADD--GRTREXX 436
VAPHVNPAFF H MW D S+GGWG ++ RTRE
Sbjct: 457 GFAAVAPHVNPAFFGRGMTNNGMGMVGSSLMDGHQGGMWNDPSIGGWGGEEHGRRTRESS 516
Query: 437 XXXXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKE 616
+ +HE+GGR +R SERDWSGNSERR+ +ER+QDW+RS KE
Sbjct: 517 YGGDDGASEYGYGDTNHEKGGR--------ERGSERDWSGNSERRNHEERDQDWDRSQKE 568
Query: 617 R---RYRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYG 787
+ RYR+ KDG R++R +E +DYG
Sbjct: 569 QKEHRYREGKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYG 628
Query: 788 KRRRLPSE 811
KRRRLPSE
Sbjct: 629 KRRRLPSE 636
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 171 bits (433), Expect = 6e-40
Identities = 100/243 (41%), Positives = 117/243 (48%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QG+AGPA GGP GG+MH Q MMGAGFDP Y VN++
Sbjct: 348 YGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSM 407
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDGRTREXXXX 442
L GVAPHVNPAFF M S G G + G+ E
Sbjct: 408 GLAGVAPHVNPAFFARGMAPNG---------------MGMMASSGMEGPNPGK--ESSYD 450
Query: 443 XXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKERR 622
E +HE+G RS+ A REK+R SERDWSGNS+RRHRDEREQDW+RS++E +
Sbjct: 451 GDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPK 510
Query: 623 YRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGKRRRL 802
YR+EKD YR HRQRE +DYGKRRR
Sbjct: 511 YREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRRRP 570
Query: 803 PSE 811
PSE
Sbjct: 571 PSE 573
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 156 bits (395), Expect = 2e-35
Identities = 92/243 (37%), Positives = 116/243 (47%)
Frame = +2
Query: 83 YAQGLAGPAMGGPTGGLMHPQNMMGAGFDPTYXXXXXXXXXXXXXXXXXXXXXXXXVNTV 262
Y QGL GP GGP G +MHPQ MMG GFD + VN++
Sbjct: 403 YGQGLNGPGFGGPPG-MMHPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSM 461
Query: 263 ALTGVAPHVNPAFFXXXXXXXXXXXXXXXXXXXHHAVMWGDTSMGGWGADDGRTREXXXX 442
L GVAPHVNPAFF H+ MW D +MGGWG ++ RE
Sbjct: 462 GLPGVAPHVNPAFFGRGMNPNGMGMMGNPGMVGPHSGMWNDPNMGGWGGEE-HGRESSYG 520
Query: 443 XXXXXXXXXXXEASHERGGRSTAAPREKDRSSERDWSGNSERRHRDEREQDWERSDKERR 622
E SH++ RS+AAPREK+R+SER++ ER+HR+ERE D ER+D++ +
Sbjct: 521 GEDNASEYGYGEGSHDKSVRSSAAPREKERTSEREYP---ERKHREERENDGERNDRDSK 577
Query: 623 YRDEKDGYREHRQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYGKRRRL 802
YR+EKD YREHR +E DYGKRRR+
Sbjct: 578 YREEKDRYREHRHKE-RESGYDDDWDRGQSSRSRSRSGAVQEEDHRSRSRDADYGKRRRM 636
Query: 803 PSE 811
PSE
Sbjct: 637 PSE 639