BLASTX nr result
ID: Cocculus22_contig00005458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00005458
(635 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16564.3| unnamed protein product [Vitis vinifera] 164 2e-38
ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265... 164 2e-38
ref|XP_002303980.2| hypothetical protein POPTR_0003s20820g [Popu... 163 4e-38
gb|EXB94811.1| hypothetical protein L484_005067 [Morus notabilis] 160 3e-37
ref|XP_007205626.1| hypothetical protein PRUPE_ppa009156mg [Prun... 155 1e-35
ref|XP_004149639.1| PREDICTED: uncharacterized protein LOC101216... 155 1e-35
ref|XP_007014029.1| Antitermination NusB domain-containing prote... 155 1e-35
ref|XP_007014028.1| Antitermination NusB domain-containing prote... 155 1e-35
ref|XP_004294941.1| PREDICTED: uncharacterized protein LOC101311... 154 2e-35
ref|XP_006359198.1| PREDICTED: uncharacterized protein LOC102583... 152 8e-35
ref|XP_004228949.1| PREDICTED: uncharacterized protein LOC101254... 151 1e-34
dbj|BAK74849.1| plastid RNA-binding protein NUS1 [Oryza sativa J... 151 1e-34
gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryza sativa Japo... 151 1e-34
ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japonica Group] g... 151 1e-34
ref|XP_006651651.1| PREDICTED: uncharacterized protein LOC102706... 150 2e-34
gb|ACN25985.1| unknown [Zea mays] gi|413933544|gb|AFW68095.1| hy... 150 4e-34
ref|NP_001146234.1| uncharacterized protein LOC100279806 [Zea ma... 150 4e-34
ref|XP_006488956.1| PREDICTED: uncharacterized protein LOC102627... 149 9e-34
ref|XP_006445559.1| hypothetical protein CICLE_v10015880mg [Citr... 149 9e-34
ref|XP_002867567.1| antitermination NusB domain-containing prote... 148 1e-33
>emb|CBI16564.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 164 bits (416), Expect = 2e-38
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR RK+LVAVVD W+ H LVI+K++PPNWKNEP GRILELCILHLAM+EIA LGTRHQ
Sbjct: 109 ILRFTRKLLVAVVDKWNSHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEIAVLGTRHQ 168
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP*EVT 321
IVINEAVDLAKRFCDG APRIINGCLRT+VK+ G E T
Sbjct: 169 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDLEGTGITRASETT 213
>ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265613 [Vitis vinifera]
Length = 288
Score = 164 bits (416), Expect = 2e-38
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR RK+LVAVVD W+ H LVI+K++PPNWKNEP GRILELCILHLAM+EIA LGTRHQ
Sbjct: 179 ILRFTRKLLVAVVDKWNSHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEIAVLGTRHQ 238
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP*EVT 321
IVINEAVDLAKRFCDG APRIINGCLRT+VK+ G E T
Sbjct: 239 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKDLEGTGITRASETT 283
>ref|XP_002303980.2| hypothetical protein POPTR_0003s20820g [Populus trichocarpa]
gi|550343660|gb|EEE78959.2| hypothetical protein
POPTR_0003s20820g [Populus trichocarpa]
Length = 308
Score = 163 bits (413), Expect = 4e-38
Identities = 75/97 (77%), Positives = 85/97 (87%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LR RK+LVAVVD WD H LVI+K+SPPNWKNEP GRILE CILH+AM+EI LGTRHQ
Sbjct: 199 LLRFTRKLLVAVVDKWDSHVLVIDKVSPPNWKNEPAGRILEFCILHMAMSEITVLGTRHQ 258
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGAN 345
IVINEAVDLAKRFCDG PRIINGCLRT++K+ SGA+
Sbjct: 259 IVINEAVDLAKRFCDGAGPRIINGCLRTFLKDLSGAS 295
>gb|EXB94811.1| hypothetical protein L484_005067 [Morus notabilis]
Length = 301
Score = 160 bits (405), Expect = 3e-37
Identities = 73/92 (79%), Positives = 83/92 (90%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILRL RK+LVAV D WD H +VI+K++PPNWKNEP GRILE CILHLAM+EI+ LGTRHQ
Sbjct: 189 ILRLTRKLLVAVSDQWDSHVIVIDKVAPPNWKNEPAGRILEFCILHLAMSEISVLGTRHQ 248
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKN 360
IVINEAVDLAKRFCDG APR+INGCLRT+VK+
Sbjct: 249 IVINEAVDLAKRFCDGAAPRVINGCLRTFVKD 280
>ref|XP_007205626.1| hypothetical protein PRUPE_ppa009156mg [Prunus persica]
gi|462401268|gb|EMJ06825.1| hypothetical protein
PRUPE_ppa009156mg [Prunus persica]
Length = 304
Score = 155 bits (392), Expect = 1e-35
Identities = 72/99 (72%), Positives = 83/99 (83%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR RK+LVAV+D WD H LVI+K++PPNWK+EP GRILELCILHLAM+EI L TRH
Sbjct: 194 ILRFTRKLLVAVMDKWDSHVLVIDKVAPPNWKDEPAGRILELCILHLAMSEITVLETRHP 253
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGV 339
IVINEAVDLAKRFCDG+APR+INGCLRT+VK G+
Sbjct: 254 IVINEAVDLAKRFCDGSAPRVINGCLRTFVKGIEETGGL 292
>ref|XP_004149639.1| PREDICTED: uncharacterized protein LOC101216754 [Cucumis sativus]
Length = 378
Score = 155 bits (392), Expect = 1e-35
Identities = 73/92 (79%), Positives = 80/92 (86%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR RK+LVAV DGWD AL IEK+ PP WKN+P GRILELCILHLAM+EI +GTRHQ
Sbjct: 275 ILRFTRKLLVAVGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQ 334
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKN 360
IVINEAVDLAKRFCDG APRIINGCLRT+VK+
Sbjct: 335 IVINEAVDLAKRFCDGAAPRIINGCLRTFVKD 366
>ref|XP_007014029.1| Antitermination NusB domain-containing protein isoform 2 [Theobroma
cacao] gi|508784392|gb|EOY31648.1| Antitermination NusB
domain-containing protein isoform 2 [Theobroma cacao]
Length = 225
Score = 155 bits (391), Expect = 1e-35
Identities = 72/95 (75%), Positives = 83/95 (87%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LR RK+LVA+VD WD H LVI+KI+P NWKNEP GRILEL ILHLAM+E+ LGTRHQ
Sbjct: 118 LLRFTRKLLVAIVDKWDSHVLVIDKIAPLNWKNEPAGRILELSILHLAMSEMTVLGTRHQ 177
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSG 351
IVINEAVDLAKRFCDG APR+INGCLRT+VK+ +G
Sbjct: 178 IVINEAVDLAKRFCDGAAPRVINGCLRTFVKDLAG 212
>ref|XP_007014028.1| Antitermination NusB domain-containing protein isoform 1 [Theobroma
cacao] gi|508784391|gb|EOY31647.1| Antitermination NusB
domain-containing protein isoform 1 [Theobroma cacao]
Length = 290
Score = 155 bits (391), Expect = 1e-35
Identities = 72/95 (75%), Positives = 83/95 (87%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LR RK+LVA+VD WD H LVI+KI+P NWKNEP GRILEL ILHLAM+E+ LGTRHQ
Sbjct: 183 LLRFTRKLLVAIVDKWDSHVLVIDKIAPLNWKNEPAGRILELSILHLAMSEMTVLGTRHQ 242
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSG 351
IVINEAVDLAKRFCDG APR+INGCLRT+VK+ +G
Sbjct: 243 IVINEAVDLAKRFCDGAAPRVINGCLRTFVKDLAG 277
>ref|XP_004294941.1| PREDICTED: uncharacterized protein LOC101311171 [Fragaria vesca
subsp. vesca]
Length = 291
Score = 154 bits (389), Expect = 2e-35
Identities = 75/106 (70%), Positives = 87/106 (82%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR ARK+LVAV+D WD H LVI++++PPNWK+EP RILELCILHLAM+EI LGTRHQ
Sbjct: 183 ILRFARKLLVAVMDKWDSHVLVIDRVAPPNWKDEPGSRILELCILHLAMSEITVLGTRHQ 242
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP*EVTP 318
IVINEAVDLAKRFCDG+APR INGCLRT+V NG+ +TP
Sbjct: 243 IVINEAVDLAKRFCDGSAPRTINGCLRTFV------NGLEETGLTP 282
>ref|XP_006359198.1| PREDICTED: uncharacterized protein LOC102583345 [Solanum tuberosum]
Length = 291
Score = 152 bits (384), Expect = 8e-35
Identities = 71/92 (77%), Positives = 81/92 (88%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR RK+LVAV + WD H LVI K++P NWKNEP GRILEL ILHLAM+EI+ LGTRHQ
Sbjct: 185 ILRFTRKLLVAVEEKWDSHVLVINKVAPDNWKNEPAGRILELSILHLAMSEISVLGTRHQ 244
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKN 360
IVINEAVDLAKRFCDG+APRI+NGCLRT+VK+
Sbjct: 245 IVINEAVDLAKRFCDGSAPRIVNGCLRTFVKD 276
>ref|XP_004228949.1| PREDICTED: uncharacterized protein LOC101254024 [Solanum
lycopersicum]
Length = 291
Score = 151 bits (382), Expect = 1e-34
Identities = 69/92 (75%), Positives = 81/92 (88%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
ILR RK+LVAV + WD H LVI K++P NWKNEP GRILEL ILHLAM+EI+ LGTRHQ
Sbjct: 185 ILRFTRKLLVAVEEKWDSHVLVINKVAPDNWKNEPAGRILELSILHLAMSEISVLGTRHQ 244
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKN 360
IV+NEAVDLAKRFCDG+APRI+NGCLRT++K+
Sbjct: 245 IVVNEAVDLAKRFCDGSAPRIVNGCLRTFIKD 276
>dbj|BAK74849.1| plastid RNA-binding protein NUS1 [Oryza sativa Japonica Group]
Length = 287
Score = 151 bits (382), Expect = 1e-34
Identities = 69/101 (68%), Positives = 84/101 (83%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LRLAR++LVAV GWDKH +I KI+P NWK+EP+ RILELCILH+AMAE+ + GT H+
Sbjct: 180 VLRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHK 239
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP 333
IVINEAVDLAKRFCDG APR+INGCLRT+VK+H + P
Sbjct: 240 IVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQP 280
>gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryza sativa Japonica Group]
Length = 287
Score = 151 bits (382), Expect = 1e-34
Identities = 69/101 (68%), Positives = 84/101 (83%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LRLAR++LVAV GWDKH +I KI+P NWK+EP+ RILELCILH+AMAE+ + GT H+
Sbjct: 180 VLRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHK 239
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP 333
IVINEAVDLAKRFCDG APR+INGCLRT+VK+H + P
Sbjct: 240 IVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQP 280
>ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japonica Group]
gi|31415975|gb|AAP50995.1| unknown protein [Oryza sativa
Japonica Group] gi|108710180|gb|ABF97975.1|
antitermination NusB domain-containing protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113549282|dbj|BAF12725.1| Os03g0656900 [Oryza sativa
Japonica Group] gi|125545109|gb|EAY91248.1| hypothetical
protein OsI_12862 [Oryza sativa Indica Group]
Length = 287
Score = 151 bits (382), Expect = 1e-34
Identities = 69/101 (68%), Positives = 84/101 (83%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LRLAR++LVAV GWDKH +I KI+P NWK+EP+ RILELCILH+AMAE+ + GT H+
Sbjct: 180 VLRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHK 239
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP 333
IVINEAVDLAKRFCDG APR+INGCLRT+VK+H + P
Sbjct: 240 IVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSQP 280
>ref|XP_006651651.1| PREDICTED: uncharacterized protein LOC102706553 [Oryza brachyantha]
Length = 203
Score = 150 bits (380), Expect = 2e-34
Identities = 68/101 (67%), Positives = 84/101 (83%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LRLAR++LVAV GWDKH +I KI+P NWK+EP+ RILELCILH+AMAE+ + GT H+
Sbjct: 96 VLRLAREILVAVASGWDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHK 155
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGVHP 333
+VINEAVDLAKRFCDG APR+INGCLRT+VK+H + P
Sbjct: 156 VVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHMNIDTSKP 196
>gb|ACN25985.1| unknown [Zea mays] gi|413933544|gb|AFW68095.1| hypothetical protein
ZEAMMB73_110134 [Zea mays]
Length = 284
Score = 150 bits (378), Expect = 4e-34
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LRL+R++LVAV GWDKH ++I+KI P WK+EP+ RILELCILH+AMAE+A+ GT H+
Sbjct: 178 VLRLSRELLVAVASGWDKHVVIIDKIIPQAWKDEPVARILELCILHIAMAEMASKGTPHK 237
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANG 342
+VINEAVDLAKRFCDG APR+INGCLRT+VK+H G
Sbjct: 238 VVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHVDVAG 275
>ref|NP_001146234.1| uncharacterized protein LOC100279806 [Zea mays]
gi|219886309|gb|ACL53529.1| unknown [Zea mays]
Length = 174
Score = 150 bits (378), Expect = 4e-34
Identities = 67/98 (68%), Positives = 84/98 (85%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LRL+R++LVAV GWDKH ++I+KI P WK+EP+ RILELCILH+AMAE+A+ GT H+
Sbjct: 68 VLRLSRELLVAVASGWDKHVVIIDKIIPQAWKDEPVARILELCILHIAMAEMASKGTPHK 127
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANG 342
+VINEAVDLAKRFCDG APR+INGCLRT+VK+H G
Sbjct: 128 VVINEAVDLAKRFCDGGAPRVINGCLRTFVKDHVDVAG 165
>ref|XP_006488956.1| PREDICTED: uncharacterized protein LOC102627108 [Citrus sinensis]
Length = 302
Score = 149 bits (375), Expect = 9e-34
Identities = 69/99 (69%), Positives = 81/99 (81%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LR RK+LVAVVD WD H +I+K+ PP WK++P GRILEL ILHLAM+EI +GTRHQ
Sbjct: 191 LLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQ 250
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGV 339
IVINEAVDLAKRFCDG APRIINGCLRT+V+N G +
Sbjct: 251 IVINEAVDLAKRFCDGAAPRIINGCLRTFVRNLEGTANI 289
>ref|XP_006445559.1| hypothetical protein CICLE_v10015880mg [Citrus clementina]
gi|557548170|gb|ESR58799.1| hypothetical protein
CICLE_v10015880mg [Citrus clementina]
Length = 333
Score = 149 bits (375), Expect = 9e-34
Identities = 69/99 (69%), Positives = 81/99 (81%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LR RK+LVAVVD WD H +I+K+ PP WK++P GRILEL ILHLAM+EI +GTRHQ
Sbjct: 222 LLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQ 281
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGANGV 339
IVINEAVDLAKRFCDG APRIINGCLRT+V+N G +
Sbjct: 282 IVINEAVDLAKRFCDGAAPRIINGCLRTFVRNLEGTANI 320
>ref|XP_002867567.1| antitermination NusB domain-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313403|gb|EFH43826.1|
antitermination NusB domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 148 bits (374), Expect = 1e-33
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = -1
Query: 635 ILRLARKMLVAVVDGWDKHALVIEKISPPNWKNEPIGRILELCILHLAMAEIATLGTRHQ 456
+LR A+K+L AVVD WD H ++IEKISPP+WK+ P GRILE ILHLAM+E+A L TRH
Sbjct: 191 VLRFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMSEVAVLETRHP 250
Query: 455 IVINEAVDLAKRFCDGTAPRIINGCLRTYVKNHSGAN 345
IVINEAVDLAKRFCDG+APRIINGCLRT+VK+ + +
Sbjct: 251 IVINEAVDLAKRFCDGSAPRIINGCLRTFVKDRAATS 287