BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005435
         (506 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007138997.1| hypothetical protein PHAVU_009G256100g [Phas...   221   6e-56
ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   220   1e-55
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela...   217   2e-54
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   217   2e-54
ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II su...   216   2e-54
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   216   3e-54
ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citr...   215   4e-54
ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II su...   215   4e-54
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   215   4e-54
ref|XP_007223507.1| hypothetical protein PRUPE_ppa013594mg [Prun...   212   4e-53
ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, ...   212   4e-53
ref|XP_007035762.1| RNA polymerases M/15 Kd subunit [Theobroma c...   211   8e-53
ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arab...   211   8e-53
ref|XP_006406782.1| hypothetical protein EUTSA_v10021989mg [Eutr...   210   1e-52
ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Caps...   210   1e-52
ref|NP_567490.1| RNA polymerases subunit NRP(B/D/E)9b  [Arabidop...   210   1e-52
ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selag...   209   2e-52
ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II su...   209   3e-52
ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subun...   209   3e-52
ref|XP_006414371.1| hypothetical protein EUTSA_v10026603mg [Eutr...   208   5e-52

>ref|XP_007138997.1| hypothetical protein PHAVU_009G256100g [Phaseolus vulgaris]
           gi|561012084|gb|ESW10991.1| hypothetical protein
           PHAVU_009G256100g [Phaseolus vulgaris]
          Length = 114

 Score =  221 bits (564), Expect = 6e-56
 Identities = 97/114 (85%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED  QK+LLYACRNCDHQEVADN+C+Y NEIHHS+GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTKSVRC +CNHGEA FFQAT+RGEEGM LFFVCCNPNC Y WRD
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  220 bits (561), Expect = 1e-55
 Identities = 97/114 (85%), Positives = 106/114 (92%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED +QK+LLYACRNCDHQEVA+N C+Y NEIHHS+GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTKSVRCA+CNHGEA FFQAT+RGEEGM LFFVCCNPNC Y WRD
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
           gi|302811122|ref|XP_002987251.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300145148|gb|EFJ11827.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300156045|gb|EFJ22675.1| hypothetical protein
           SELMODRAFT_232741 [Selaginella moellendorffii]
          Length = 115

 Score =  217 bits (552), Expect = 2e-54
 Identities = 96/114 (84%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED  QK+LLYACRNCDHQEVADN C+Y NE+HHS GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTKSVRC +C HGEA FFQAT+RGEEGM LFFVCCNPNC Y WRD
Sbjct: 61  DVASDPTLPRTKSVRCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGYRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  217 bits (552), Expect = 2e-54
 Identities = 95/114 (83%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MS MKFCRECNNILYPKED  QKVLL+ACRNCDHQEVADN+C+Y NEIHHS+GERTQ+LQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTKSVRC++CNHGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004487774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like [Cicer
           arietinum]
          Length = 114

 Score =  216 bits (551), Expect = 2e-54
 Identities = 95/114 (83%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED  Q+ LLYACRNCDHQEVADNYC+Y NEIHHS+GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQRNLLYACRNCDHQEVADNYCVYRNEIHHSVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTK+VRC +CNHGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKAVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  216 bits (549), Expect = 3e-54
 Identities = 94/114 (82%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED  +K+LLYACRNCDHQEVADN C+Y NEIHH++GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTK+VRCA+CNHGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_006419407.1| hypothetical protein CICLE_v10006256mg [Citrus clementina]
           gi|568871362|ref|XP_006488857.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 9A-like [Citrus
           sinensis] gi|557521280|gb|ESR32647.1| hypothetical
           protein CICLE_v10006256mg [Citrus clementina]
          Length = 114

 Score =  215 bits (548), Expect = 4e-54
 Identities = 94/114 (82%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED+ QK+LLYACRNCDHQEVADN C+Y NE+HHS+GERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEVHHSVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTK+VRC KC HGEA FFQATSRGEEGM LFFVCCNPNC + WR+
Sbjct: 61  DVAADPTLPRTKAVRCVKCQHGEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_004295094.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Fragaria vesca subsp. vesca]
          Length = 114

 Score =  215 bits (548), Expect = 4e-54
 Identities = 95/114 (83%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKE+++ K+LLYACRNCDHQEVADN C+Y NEIHHS+GERTQILQ
Sbjct: 1   MSTMKFCRECNNILYPKENKEDKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQILQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTK+VRCA+C HGEA FFQAT+RGEEGM LFFVCCNPNC Y WRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  215 bits (548), Expect = 4e-54
 Identities = 93/114 (81%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED +QK+LLYACRNCDHQE ADN+C+Y NEIHHS+ ERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTK+VRC +CNHGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_007223507.1| hypothetical protein PRUPE_ppa013594mg [Prunus persica]
           gi|462420443|gb|EMJ24706.1| hypothetical protein
           PRUPE_ppa013594mg [Prunus persica]
          Length = 114

 Score =  212 bits (540), Expect = 4e-53
 Identities = 93/114 (81%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED+ QK+LLYACRNCDHQEVADN C+Y NEIHH++GERTQILQ
Sbjct: 1   MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQILQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTK+VRC++C HGEA FFQAT+RGEEGM LFFVCCNP+C + WRD
Sbjct: 61  DVAADPTLPRTKAVRCSECKHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRD 114


>ref|XP_003546327.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           9A-like [Glycine max]
          Length = 114

 Score =  212 bits (540), Expect = 4e-53
 Identities = 93/114 (81%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MS MKFCRECNNILYPKED +QKVLL+ACRNCDHQEVADN+C+Y NEI H +GERTQ+LQ
Sbjct: 1   MSAMKFCRECNNILYPKEDREQKVLLFACRNCDHQEVADNFCVYRNEIQHPVGERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTKSVRC +CNHGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_007035762.1| RNA polymerases M/15 Kd subunit [Theobroma cacao]
           gi|508714791|gb|EOY06688.1| RNA polymerases M/15 Kd
           subunit [Theobroma cacao]
          Length = 114

 Score =  211 bits (537), Expect = 8e-53
 Identities = 94/114 (82%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED +QK+LLYACRNCDHQEVA+N C+Y NE+HHS GERTQILQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEVHHSAGERTQILQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTKSV CA C HGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKSVICANCKHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_002883036.1| hypothetical protein ARALYDRAFT_318462 [Arabidopsis lyrata subsp.
           lyrata] gi|297328876|gb|EFH59295.1| hypothetical protein
           ARALYDRAFT_318462 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  211 bits (537), Expect = 8e-53
 Identities = 93/114 (81%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++QK+LLYACRNCDHQEVADN C+Y NE+HHS+ ERTQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK+VRCAKC H EA FFQAT+RGEEGM LFFVCCNPNC + WR+
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHSEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_006406782.1| hypothetical protein EUTSA_v10021989mg [Eutrema salsugineum]
           gi|557107928|gb|ESQ48235.1| hypothetical protein
           EUTSA_v10021989mg [Eutrema salsugineum]
          Length = 114

 Score =  210 bits (535), Expect = 1e-52
 Identities = 92/114 (80%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++QK+LLYACRNC+HQE ADN C+Y NE+HHS+ ERTQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAADNSCVYRNEVHHSVSERTQILT 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK+VRCAKC HGEA FFQAT+RGEEGM LFFVCCNPNC + WR+
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_006299525.1| hypothetical protein CARUB_v10015697mg [Capsella rubella]
           gi|482568234|gb|EOA32423.1| hypothetical protein
           CARUB_v10015697mg [Capsella rubella]
          Length = 114

 Score =  210 bits (535), Expect = 1e-52
 Identities = 93/114 (81%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++QK+LLYACRNCDHQEVADN C+Y NE+HHS+ ERTQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK+VRCAKC H EA FFQAT+RGEEGM LFFVCCNPNC + WR+
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114


>ref|NP_567490.1| RNA polymerases subunit NRP(B/D/E)9b  [Arabidopsis thaliana]
           gi|297800522|ref|XP_002868145.1| hypothetical protein
           ARALYDRAFT_493259 [Arabidopsis lyrata subsp. lyrata]
           gi|565447067|ref|XP_006284789.1| hypothetical protein
           CARUB_v10006057mg [Capsella rubella]
           gi|75153888|sp|Q8L5V0.1|RPB9B_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           9B gi|21537166|gb|AAM61507.1| RNA Polymerase II subunit
           14.5 kD, putative [Arabidopsis thaliana]
           gi|114050701|gb|ABI49500.1| At4g16265 [Arabidopsis
           thaliana] gi|297313981|gb|EFH44404.1| hypothetical
           protein ARALYDRAFT_493259 [Arabidopsis lyrata subsp.
           lyrata] gi|332658323|gb|AEE83723.1| RNA polymerases
           subunit NRP(B/D/E)9b [Arabidopsis thaliana]
           gi|482553494|gb|EOA17687.1| hypothetical protein
           CARUB_v10006057mg [Capsella rubella]
          Length = 114

 Score =  210 bits (535), Expect = 1e-52
 Identities = 92/114 (80%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++Q +LLYACRNCDHQE ADN C+Y NE+HHS+ E+TQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK+VRCAKC HGEA FFQAT+RGEEGM LFFVCCNPNCS+ WR+
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114


>ref|XP_002962042.1| hypothetical protein SELMODRAFT_77443 [Selaginella moellendorffii]
           gi|302775260|ref|XP_002971047.1| hypothetical protein
           SELMODRAFT_95006 [Selaginella moellendorffii]
           gi|300161029|gb|EFJ27645.1| hypothetical protein
           SELMODRAFT_95006 [Selaginella moellendorffii]
           gi|300170701|gb|EFJ37302.1| hypothetical protein
           SELMODRAFT_77443 [Selaginella moellendorffii]
          Length = 114

 Score =  209 bits (533), Expect = 2e-52
 Identities = 92/114 (80%), Positives = 100/114 (87%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED  QK+LLYACRNCDHQE ADN C+Y NE+HH+  ERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKLLLYACRNCDHQEAADNNCVYRNEVHHTADERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK VRC++C HGEA FFQAT+RGEEGM LFFVCCNPNC Y WRD
Sbjct: 61  DVASDPTLPRTKDVRCSRCKHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_004239877.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Solanum lycopersicum] gi|565378585|ref|XP_006355736.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 9A-like [Solanum tuberosum]
          Length = 114

 Score =  209 bits (532), Expect = 3e-52
 Identities = 92/114 (80%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++QK+LLYACRNCDHQE A+N C+Y NEIHHS  ERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEPAENNCVYRNEIHHSAAERTQVLQ 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV +DPTLPRTKSVRC++C HGEA FFQAT+RGEEGM LFFVCCNPNC + WRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCGHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|NP_188323.1| DNA-directed RNA polymerases II, IV and V subunit 9A [Arabidopsis
           thaliana] gi|75126970|sp|Q6NLH0.1|RPB9A_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           9A gi|45752612|gb|AAS76204.1| At3g16980 [Arabidopsis
           thaliana] gi|46359779|gb|AAS88753.1| At3g16980
           [Arabidopsis thaliana] gi|332642370|gb|AEE75891.1|
           DNA-directed RNA polymerase NRPB9A/NRPD9A/NRPE9A
           [Arabidopsis thaliana]
          Length = 114

 Score =  209 bits (532), Expect = 3e-52
 Identities = 92/114 (80%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++QK+LLYACRNCDHQEVADN C+Y NE+HHS+ ERTQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK+VRC+KC H EA FFQAT+RGEEGM LFFVCCNPNC + WR+
Sbjct: 61  DVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114


>ref|XP_006414371.1| hypothetical protein EUTSA_v10026603mg [Eutrema salsugineum]
           gi|557115541|gb|ESQ55824.1| hypothetical protein
           EUTSA_v10026603mg [Eutrema salsugineum]
          Length = 114

 Score =  208 bits (530), Expect = 5e-52
 Identities = 91/114 (79%), Positives = 103/114 (90%), Gaps = 1/114 (0%)
 Frame = -1

Query: 431 MSTMKFCRECNNILYPKEDEQQKVLLYACRNCDHQEVADNYCIYGNEIHHSIGERTQILQ 252
           MSTMKFCRECNNILYPKED++Q +LLYACRNC+HQE ADN C+Y NE+HHS+ E+TQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQAILLYACRNCEHQEAADNNCVYRNEVHHSVSEQTQILS 60

Query: 251 DVTSDPTLPRTKSVRCAKCNHGEA-FFQATSRGEEGMMLFFVCCNPNCSYLWRD 93
           DV SDPTLPRTK+VRCAKC HGEA FFQAT+RGEEGM LFFVCCNPNCS+ WR+
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114