BLASTX nr result
ID: Cocculus22_contig00005327
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00005327 (2164 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 410 e-111 emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 384 e-104 ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 367 2e-98 ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 357 2e-95 ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 356 2e-95 ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 355 5e-95 ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 353 1e-94 ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 352 4e-94 ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 352 4e-94 ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 350 2e-93 ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 349 3e-93 ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 333 1e-88 ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A... 324 9e-86 gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus... 321 8e-85 ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ... 303 2e-79 ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC ... 302 5e-79 ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC ... 302 5e-79 ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-... 301 8e-79 ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-... 287 1e-74 ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 284 1e-73 >ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera] gi|296081598|emb|CBI20603.3| unnamed protein product [Vitis vinifera] Length = 561 Score = 410 bits (1054), Expect = e-111 Identities = 231/462 (50%), Positives = 302/462 (65%), Gaps = 8/462 (1%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESA--SMPILFSVSPEESE 1786 MG+G L+LKW FP P LTNS S R SSV+ KEAS++S S P SV+ E+ E Sbjct: 1 MGMGFRLNLKWDFPISCPTLTNSPS--RLCTSSVQGKEASFDSTRFSFP---SVTSEDCE 55 Query: 1785 ALHREPLQPNTYSFGALKTMENSSIAVED-KMKLGKPLHNK----VDDVPGTIEDDTFSS 1621 +L+++P +P S GAL+T EN A+E KMK+GK H V+ I +D +S Sbjct: 56 SLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISAS 115 Query: 1620 YPHTQGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLK 1441 Q + ++ LL+ENL +EE+ AD+ ++RLERDI++Q+G+LGALKLF CLSRTLK Sbjct: 116 VAGLQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLK 175 Query: 1440 TPSSVPMLIPVTDLPSDRLGEGLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLS- 1264 T +S + T+ + G D KV+VRSG I Sbjct: 176 TSTSFDLFSAPTEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPL 235 Query: 1263 PIKTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGK 1084 P KTI K P RL+ A+NE+E+SKG+K V LERI+ TLEE G Sbjct: 236 PSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGH 295 Query: 1083 VASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQA 904 VAS S+WAEAAGVD+K LQQ+L FGW C+D+LLRS SLV+++ARNYRG+G+ ED+LQA Sbjct: 296 VASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQA 355 Query: 903 GNMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRAR 724 GN+GVLQG+ERFDHT+G +FSTYVQYWIRK+MS VA+H+RG++IP +NR I QI +AR Sbjct: 356 GNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKAR 415 Query: 723 RALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDK 598 +ALY HG+YPDD EI++FTGLS+AKIRS C R+VGS D+ Sbjct: 416 KALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQ 457 >emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] Length = 611 Score = 384 bits (987), Expect = e-104 Identities = 215/436 (49%), Positives = 285/436 (65%), Gaps = 8/436 (1%) Frame = -2 Query: 1881 TRPYFSSVRSKEASYESA--SMPILFSVSPEESEALHREPLQPNTYSFGALKTMENSSIA 1708 T PY ++ KEAS++S S P SV+ E+ E+L+++P +P S GAL+T EN A Sbjct: 78 TDPY---IQGKEASFDSTRFSFP---SVTSEDCESLYKDPFKPFACSSGALQTFENDYSA 131 Query: 1707 VED-KMKLGKPLHNK----VDDVPGTIEDDTFSSYPHTQGNNEYRYGLLMENLGKIEEII 1543 +E KMK+GK H V+ I +D +S Q + ++ LL+ENL +EE+ Sbjct: 132 MEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMF 191 Query: 1542 ADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPVTDLPSDRLGEGLTID 1363 AD+ ++RLERDI++Q+G+LGALKLF CLSRTLKT +S + T+ + G D Sbjct: 192 ADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDD 251 Query: 1362 RAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLS-PIKTISKVPXXXXXXXXXXXXXXXXX 1186 KV+VRSG I P KTI K P Sbjct: 252 HLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRK 311 Query: 1185 RLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAGVDEKELQQRLHFGW 1006 RL+ A+NE+E+SKG+K V LERI+ TLEE G VAS S+WAEAAGVD+K LQQ+L FGW Sbjct: 312 RLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGW 371 Query: 1005 SCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGCQFSTYVQY 826 C+D+LLRS SLV+++ARNYRG+G+ ED+LQAGN+GVLQG+ERFDHT+G +FSTYVQY Sbjct: 372 YCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQY 431 Query: 825 WIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHGKYPDDAEISRFTGLSVAK 646 WIRK+MS VA+H+RG++IP +NR I QI +AR+ALY HG+YPDD EI++FTGLS+AK Sbjct: 432 WIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAK 491 Query: 645 IRSTSKCPRIVGSIDK 598 IRS C R+VGS D+ Sbjct: 492 IRSAGNCLRVVGSTDQ 507 >ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis] Length = 560 Score = 367 bits (941), Expect = 2e-98 Identities = 218/477 (45%), Positives = 306/477 (64%), Gaps = 12/477 (2%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSS--STRPYFSSVRSKEASYESASMPILFSVSPEESE 1786 MG G L+LK FP SP NS S S+ P S VR +EA+ + + L SV EE + Sbjct: 1 MGFGFRLNLKLDFPFHSP---NSPSRLSSSPSSSFVRGREATSYQSRLSFL-SVISEEGD 56 Query: 1785 ALHREPLQPNTYSFGALKTMENSSIAVED-KMKLGKPLH---NKVDDVPGTIEDDTFSSY 1618 HR+PL+ YS+ A++T+EN E K+ GK H N + D ++++D F S Sbjct: 57 IAHRDPLKTYAYSY-AVQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDIFVS- 114 Query: 1617 PHTQGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKT 1438 P + R+ LL+ENL +E+ AD++ +LE DIL+Q+GKLGALKLF+ CL+RTL+T Sbjct: 115 PSSTKERTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLET 174 Query: 1437 PSSVPMLIPVTDLPSDRLGE----GLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISG 1270 + ++ V+D+ ++ +GE G +I+ KV+V + S Sbjct: 175 TN----VLEVSDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSP 230 Query: 1269 LSPI--KTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEE 1096 P+ + I RL+IARNE+E+++GIK + LE+I+ TLEE Sbjct: 231 SLPLPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEE 290 Query: 1095 ASGKVASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLED 916 + +V S S WAEAAG+D K LQQ+L FGW C+D+L++S RSLV++ ARNYRG GI LED Sbjct: 291 ETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALED 350 Query: 915 LLQAGNMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQI 736 LLQAGN+GVL+G+ERFDHTRG +FSTYVQYWIRK+MSK V++ +RGIQIP ++R I QI Sbjct: 351 LLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQI 410 Query: 735 LRARRALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 +AR+AL +GKYPDD EI+++TGLS+AKI S S+C R+VGSID+K+G S++ K + Sbjct: 411 QKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYL 467 >ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica] gi|462419859|gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica] Length = 555 Score = 357 bits (915), Expect = 2e-95 Identities = 203/460 (44%), Positives = 289/460 (62%), Gaps = 4/460 (0%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG+G L+LK FP S +S S + +SVR +E S+ SA + L SV EE EA Sbjct: 1 MGLGFRLNLKCGFPVHSSHWQTTSPS-KISSTSVRGREGSFNSARLSFL-SVISEEGEAS 58 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGN 1600 ++PL+ T+ + + +E+ +E+ + + D + + F S + Sbjct: 59 SKDPLKVYTFPSASPQILEDGVSELEEVKTAFRRVPKSFSDNQMPVAEGKFISSKGLEAC 118 Query: 1599 NEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPM 1420 + LL++NL +EE A +++++LE++IL+Q+ +LGALKLF CLSRTLKT S Sbjct: 119 TASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLKTSS---- 174 Query: 1419 LIPVTDLPSDRLGEGLTI----DRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKT 1252 + ++D+P+ + EG + G++IVRSG + L P KT Sbjct: 175 FLDLSDIPTVPVEEGKMERKEDNNVGEIIVRSGKKEERRSRKRTSDNAIVSSNSLPP-KT 233 Query: 1251 ISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASF 1072 I K RL I++NE+E+S G+K + LERIK+TLE+ +GKVA+ Sbjct: 234 IWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATL 293 Query: 1071 SSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMG 892 WAEAAGV EK L Q L FGW C+D+L+RS RSLV++LARNYRGLG+ L+DL+QAGN+G Sbjct: 294 RCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLG 353 Query: 891 VLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALY 712 +LQG+ERFDH+RG +FSTYVQYWIRK+MS+ VAQH+RG+QIP +++ INQI +AR+A Y Sbjct: 354 LLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQKARKANY 413 Query: 711 GVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKV 592 H KYPDD EI++ TGLS+A+IRS S C R+VGS+D K+ Sbjct: 414 NSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKM 453 >ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca subsp. vesca] Length = 545 Score = 356 bits (914), Expect = 2e-95 Identities = 206/456 (45%), Positives = 290/456 (63%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG+G L+LK FP + +S S P SSVR +E S+ SA + L SV EE E Sbjct: 1 MGLGFRLNLKCGFPIHNSHWQTNSPSKLPS-SSVRGREGSFSSAGLSFL-SVISEECETS 58 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGN 1600 ++PL+ T + + +++ +E+KM P I+D +S + + G Sbjct: 59 SKDPLKVYTCPSASPQLLDDGLSEMEEKMN---PRRMSKSGSANMIDDKEYS-FMSSAGL 114 Query: 1599 NEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPM 1420 Y LL++NL +EE AD+ + +LE++IL+Q+G+LGALKLF CLSRTLKT S Sbjct: 115 RTSHYTLLLQNLNVLEETFADSGVSKLEKEILLQLGRLGALKLFEICLSRTLKTSS---- 170 Query: 1419 LIPVTDLPSDRLGEGLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKV 1240 + ++D+P++ + + T K IVRSG SG P+K + + Sbjct: 171 FLDLSDIPTEPIEKHKT---ERKNIVRSGKKEEQKSRKRTSYDSKK-FSGTLPVKQMREG 226 Query: 1239 PXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWA 1060 RL++A+NE+E+S G+K + LER+K TLE+ +GKV + WA Sbjct: 227 FKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWA 286 Query: 1059 EAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQG 880 EAAGVDEK LQQ+LHFGW C+D+L+RS RSLV++LARNYRGLG+ L+DLLQAGN+G+LQG Sbjct: 287 EAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQG 346 Query: 879 SERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHG 700 +ERFD +RG +FSTYVQYWIRK+MS+ VAQH+RGI+IP +++ IN+I +AR+A Y H Sbjct: 347 AERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKANYNSHM 406 Query: 699 KYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKV 592 KYPDD EI++ TGLS+AKI S S+C R+VGS+D K+ Sbjct: 407 KYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKI 442 >ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina] gi|557553990|gb|ESR64004.1| hypothetical protein CICLE_v10007968mg [Citrus clementina] Length = 442 Score = 355 bits (911), Expect = 5e-95 Identities = 209/468 (44%), Positives = 297/468 (63%), Gaps = 2/468 (0%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG+G L+LKWV P +S T +SS R +SVR +E S+ SA + L ++S E+S + Sbjct: 1 MGMGFRLNLKWVSPVQSHFFT--TSSCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASY 57 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGN 1600 ++P++ T SF +T+EN E+ + K G + Sbjct: 58 FQDPVKAYTCSFVNTQTVENDYSETEE-------IRQKSTSCIGQ------------DAS 98 Query: 1599 NEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPM 1420 + + LLMENL +E AD++ +RLER+IL Q+GKLGALKLF++ LSR +KT + Sbjct: 99 SRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN---- 154 Query: 1419 LIPVTDLPSDRLGEGLTID-RAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLS-PIKTIS 1246 ++ ++D+ ++ + D GK++V S + S LS P + + Sbjct: 155 VLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQ 214 Query: 1245 KVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSS 1066 + RL+IARNE+E+SKG++ V LERIK TLE+ SGK AS + Sbjct: 215 EGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNC 274 Query: 1065 WAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVL 886 WA+AAGV E+ L+Q L FGW C+++L++S R LV+FLARNYRGLGIP DLLQAGN+GVL Sbjct: 275 WAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVL 334 Query: 885 QGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGV 706 QG+ERFDHTRG +FSTYVQYWIRK++SK VA+H+RGI+IP +NR I++I +AR+AL Sbjct: 335 QGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNS 394 Query: 705 HGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIMV 562 HGKYP+D EI+++TGLS+A+IRS S+C RIVGSID+K+G ++ K +V Sbjct: 395 HGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLV 442 >ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina] gi|557553989|gb|ESR64003.1| hypothetical protein CICLE_v10007968mg [Citrus clementina] Length = 534 Score = 353 bits (907), Expect = 1e-94 Identities = 208/467 (44%), Positives = 296/467 (63%), Gaps = 2/467 (0%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG+G L+LKWV P +S T +SS R +SVR +E S+ SA + L ++S E+S + Sbjct: 1 MGMGFRLNLKWVSPVQSHFFT--TSSCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASY 57 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGN 1600 ++P++ T SF +T+EN E+ + K G + Sbjct: 58 FQDPVKAYTCSFVNTQTVENDYSETEE-------IRQKSTSCIGQ------------DAS 98 Query: 1599 NEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPM 1420 + + LLMENL +E AD++ +RLER+IL Q+GKLGALKLF++ LSR +KT + Sbjct: 99 SRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN---- 154 Query: 1419 LIPVTDLPSDRLGEGLTID-RAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLS-PIKTIS 1246 ++ ++D+ ++ + D GK++V S + S LS P + + Sbjct: 155 VLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQ 214 Query: 1245 KVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSS 1066 + RL+IARNE+E+SKG++ V LERIK TLE+ SGK AS + Sbjct: 215 EGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNC 274 Query: 1065 WAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVL 886 WA+AAGV E+ L+Q L FGW C+++L++S R LV+FLARNYRGLGIP DLLQAGN+GVL Sbjct: 275 WAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVL 334 Query: 885 QGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGV 706 QG+ERFDHTRG +FSTYVQYWIRK++SK VA+H+RGI+IP +NR I++I +AR+AL Sbjct: 335 QGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNS 394 Query: 705 HGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 HGKYP+D EI+++TGLS+A+IRS S+C RIVGSID+K+G ++ K + Sbjct: 395 HGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYL 441 >ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum] Length = 555 Score = 352 bits (903), Expect = 4e-94 Identities = 212/473 (44%), Positives = 287/473 (60%), Gaps = 10/473 (2%) Frame = -2 Query: 1953 IGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEALHR 1774 +G L LKW F + P +NSSS P S + +EA Y+ A F + E H Sbjct: 1 MGFRLHLKWGFSVQPPFSSNSSSW--PSSHSFKGREALYDPARSLKPFITG--DCEPSHS 56 Query: 1773 EPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKV-DDVP----GTIEDDTFSSYPHT 1609 +P + T ++S+ E K + G+ + V D+ G D +Y +T Sbjct: 57 DPFRVQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNT 116 Query: 1608 QGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSS 1429 + LLM+NL +E + AD+E+ RLERDIL+Q+ KLGAL+ FH CLSRT + S+ Sbjct: 117 --TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS-ST 173 Query: 1428 VPMLIPVTDLPSDRLGEGLTIDRAG----KVIVRSGXXXXXXXXXXXXXXXXXKISGLSP 1261 P ++ D+P + + E D G KV+VRS I + P Sbjct: 174 FPKVL---DVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQP 230 Query: 1260 -IKTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGK 1084 K I + R IA+NE+E+S+G+K V LERI+ LEE +G+ Sbjct: 231 HTKNIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGR 290 Query: 1083 VASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQA 904 VA+FSSWAEAAG+++KELQQRLHFGW C+D+LL+S RSLV++LARNYRGLG+ EDL+QA Sbjct: 291 VATFSSWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQA 350 Query: 903 GNMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRAR 724 GNMGVLQG+ RFDHTRG +FSTYVQYWIRK++SK VAQH+RG++IP + + INQI +AR Sbjct: 351 GNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKAR 410 Query: 723 RALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 + L HGK+P D EI++FTGLS A+I SKC R+VGSID+KVG IS K++ Sbjct: 411 KTLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVL 463 >ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa] gi|222854562|gb|EEE92109.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa] Length = 559 Score = 352 bits (903), Expect = 4e-94 Identities = 198/464 (42%), Positives = 296/464 (63%), Gaps = 7/464 (1%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG+G L KW P +S TNS+S + S R EAS A + L SV EE + L Sbjct: 1 MGVGFRLTPKWGSPMQSHSATNSTSMFSSF--SARGMEASVNQARLSFL-SVVSEEGDIL 57 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVED-KMKLGKPLHNKVDDVPG----TIEDDTFSSYP 1615 ++ + S A + +EN + +E KM + K H ++++ G ++E++ +S+ Sbjct: 58 NKHSFKSFACS-SAAQNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHT 116 Query: 1614 HTQGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTP 1435 + R L++NL +E+++AD + ++LERDIL+Q+G+LGAL+ F+ACLSRTL+T Sbjct: 117 RLRERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTS 176 Query: 1434 SSVPMLIPVTDLPSDRLGEGLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXK-ISGLS-P 1261 + + + T+ + +G+ D GK +VR+G K + LS P Sbjct: 177 NVLDLSAVPTENTGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGKKTTSLSLP 236 Query: 1260 IKTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKV 1081 KT+ R +IARNE+++++G+K + LERI+ TLEE +G+V Sbjct: 237 SKTVQN--NLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQV 294 Query: 1080 ASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAG 901 S S WAEA G+D+K LQQ+L FGW C+D+L+++ SLV+++ARNYRG+GI +EDL+QAG Sbjct: 295 VSLSCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAG 354 Query: 900 NMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARR 721 N+G+LQG+ERFD TRG +FSTYVQYWIRK+M K V +H+RGIQIP A++R+IN+I +AR+ Sbjct: 355 NLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARK 414 Query: 720 ALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVG 589 AL HG+YPDD E+++FTGLS+AKI S KC R+V S+D+K+G Sbjct: 415 ALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIG 458 >ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum lycopersicum] Length = 551 Score = 350 bits (897), Expect = 2e-93 Identities = 210/472 (44%), Positives = 286/472 (60%), Gaps = 9/472 (1%) Frame = -2 Query: 1953 IGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSP---EESEA 1783 +G L LKW F + P +NSSS P S + +E Y+ A S+ P + E Sbjct: 1 MGFRLHLKWGFSLQPPFSSNSSSW--PSSHSFKGRETLYDPAR-----SLKPFINGDCEP 53 Query: 1782 LHREPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKV-DDVPGTIEDDTFSSYPHTQ 1606 H +P + T ++S+ E K + G+ + V D+ D +Y +T Sbjct: 54 SHSDPFRVQTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYGDIGSYKIDGEKPTYLNT- 112 Query: 1605 GNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSV 1426 + LLM+NL +E + AD+E+ RLERDIL+Q+ KLGAL+ FH CLSRT + SS Sbjct: 113 -TKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS-SSF 170 Query: 1425 PMLIPVTDLPSDRLGEGLTIDRAG----KVIVRSGXXXXXXXXXXXXXXXXXKISGLSP- 1261 P ++ D+P + + E D G KV+VRS I + P Sbjct: 171 PKVL---DVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 227 Query: 1260 IKTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKV 1081 K I + R IA+NE+E+SKG+K V LERI+ LEE +G+V Sbjct: 228 TKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQV 287 Query: 1080 ASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAG 901 A+FSSWA+AAG+++KELQQ LHFGW C+D+LL+S RSLV++LARNYRGLG+ EDL+QAG Sbjct: 288 ATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAG 347 Query: 900 NMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARR 721 NMGVLQG+ RFDHTRG +FSTYVQYWIRK++SK VAQH+RG++IP + + INQI +AR+ Sbjct: 348 NMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARK 407 Query: 720 ALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 L HGK+P D EI++FTGLS A+I SKC R+VGSID+KVG I+ K++ Sbjct: 408 TLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVL 459 >ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis] Length = 534 Score = 349 bits (895), Expect = 3e-93 Identities = 206/467 (44%), Positives = 294/467 (62%), Gaps = 2/467 (0%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG+G L+LKWV P +S T +SS R +SVR +E S+ SA + L ++S E+S + Sbjct: 1 MGMGFRLNLKWVSPVQSHFFT--TSSCRLSSTSVRGREGSFNSARLSFLSTIS-EDSASY 57 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVEDKMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGN 1600 ++P++ T SF +T+EN E+ + K G + Sbjct: 58 FQDPVKAYTCSFVNTQTVENDYSETEE-------IRQKSTSCIGQ------------DAS 98 Query: 1599 NEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPM 1420 + + LLMENL +E AD++ +RLER+IL Q+GKLGALKLF++ LSR +KT + Sbjct: 99 SRSDFRLLMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIVKTSN---- 154 Query: 1419 LIPVTDLPSDRLGEGLTID-RAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLS-PIKTIS 1246 ++ ++D+ ++ + D GK++V S + LS P + + Sbjct: 155 VLDLSDVHTEEQKMDDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETYLLSLPSEALQ 214 Query: 1245 KVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSS 1066 + RL+IARNE+E+SKG++ V LERIK TLE+ SGK A + Sbjct: 215 EGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARLNC 274 Query: 1065 WAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVL 886 WA+AAGV E+ L+Q L FGW C+++L++S R LV+FLARNYRGLGIP DLLQAGN+GVL Sbjct: 275 WAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVL 334 Query: 885 QGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGV 706 QG+ERFDHTRG +FSTYVQYWIRK++SK VA+H+RGI+IP +NR I++I +AR+AL Sbjct: 335 QGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNS 394 Query: 705 HGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 HGKYP+D EI+++TGLS+A+IRS S+C RIVGSID+K+G ++ K + Sbjct: 395 HGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYL 441 >ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao] gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao] Length = 848 Score = 333 bits (855), Expect = 1e-88 Identities = 203/474 (42%), Positives = 278/474 (58%), Gaps = 11/474 (2%) Frame = -2 Query: 1953 IGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEALHR 1774 + +L+LK V P S L NS S P + Sbjct: 313 VAQVLNLKGVCPVPSHFLANSPSRL--------------------------PSSGVLSLK 346 Query: 1773 EPLQPNTYSFGALKTMENSSIAVED-KMKLGKPLH------NKVDDVPGTIEDDTFSSYP 1615 +PL+ S A +T+E + +E+ K+ +GK +D I D SS Sbjct: 347 DPLKAYASS-AAPQTLEKGCLEIEEMKVNIGKGSQAHSHSLTMIDKTHELIGGDKSSSRT 405 Query: 1614 HTQGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTP 1435 Q Y LLMENL +EE AD++++ LER+IL+Q+G+ GALKLF+ CLSRTLK Sbjct: 406 SPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCLSRTLKAS 465 Query: 1434 SSVPMLIPVTDLPSDR--LGEGLTID-RAGKVIVRSGXXXXXXXXXXXXXXXXXKISG-L 1267 + ++ ++D+P++ L++D + ++V S IS L Sbjct: 466 N----ILDLSDVPANSGDCNMNLSVDGQKDNIVVCSRKKKQRKKIRERALENPTIISTQL 521 Query: 1266 SPIKTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASG 1087 P T+ RL IARNE+E+SKG+K V LERI+ TLEE +G Sbjct: 522 MPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETG 581 Query: 1086 KVASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQ 907 + AS S WAEAAGV EK LQQ L FGW C+D+LLRS RSLV++ ARNYRGLGI EDL+Q Sbjct: 582 RAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQ 641 Query: 906 AGNMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRA 727 AG++GVLQG+ERFDHTRG +FSTYVQ+WIRK++S+ VA+H+RGIQ+P ++R I QI +A Sbjct: 642 AGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKA 701 Query: 726 RRALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 R+AL HGKYPD+ I++FTGLS+AKIRS +KC R+VGSID+K+G ++ K + Sbjct: 702 RKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYL 755 >ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda] gi|548857444|gb|ERN15250.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda] Length = 529 Score = 324 bits (831), Expect = 9e-86 Identities = 195/437 (44%), Positives = 268/437 (61%), Gaps = 12/437 (2%) Frame = -2 Query: 1863 SVRSKEASYESASMPILFSVSPEESEALHREPLQPNTYSFGALKTMENS-SIAVEDKMKL 1687 +V+SK+ S ESA L SV PEE+E L + + Y FG ++ +S I E KM + Sbjct: 6 AVKSKQPSIESAKASTL-SVIPEETERLLGDCTKDFPYFFGDIQNANSSHDITEEMKMNI 64 Query: 1686 GKPLHNK----VDDVPGTIEDDTFSSY---PHTQGNNEYRYGLLMENLGKIEEIIADTEL 1528 K + +D I +DTFS+ PH + L ENL KIE II D+ Sbjct: 65 NKNKPDASLYVIDKAELPIAEDTFSNVAGLPH--------FSFLFENLEKIEGIIVDSGN 116 Query: 1527 IRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPVTD----LPSDRLGEGLTIDR 1360 RLER+IL+ I +LGALKLFHA LSRTLK P + + + P D +G + Sbjct: 117 ARLEREILLHIERLGALKLFHAFLSRTLKDPKILDVTGTCPEHAMVQPMDEQADGYIVS- 175 Query: 1359 AGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKVPXXXXXXXXXXXXXXXXXRL 1180 +GK + R S L +K +K L Sbjct: 176 SGKKVERKAQRERALKKVTDEPIVC---SSLKRVKKSTKSINAALTHKGHPGNSKSRSHL 232 Query: 1179 VIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAGVDEKELQQRLHFGWSC 1000 A++E E+S+G+++V LE+I+ LEE G+ ASFS WAEAAG++EK L+Q+LHFGW C Sbjct: 233 R-AQSEVEMSRGVQEVAKLEKIRANLEENLGRDASFSVWAEAAGINEKVLKQQLHFGWFC 291 Query: 999 KDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGCQFSTYVQYWI 820 +DKLLRS R LVM+LA++YRG GI EDLLQAG++GVLQG+ERFDHTRG +FSTYVQYWI Sbjct: 292 RDKLLRSTRPLVMYLAKSYRGRGIGFEDLLQAGSLGVLQGAERFDHTRGYRFSTYVQYWI 351 Query: 819 RKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHGKYPDDAEISRFTGLSVAKIR 640 RK++S VA+HSRG+QIPMA+N+ +NQ ++A+RAL+ +HG++P + EI+ FTGLS+ +R Sbjct: 352 RKSLSALVARHSRGVQIPMALNKVLNQTVKAKRALHQMHGRHPREVEIAEFTGLSLVNVR 411 Query: 639 STSKCPRIVGSIDKKVG 589 +KC R+ GSID+++G Sbjct: 412 LANKCLRVHGSIDQRIG 428 >gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Mimulus guttatus] Length = 478 Score = 321 bits (823), Expect = 8e-85 Identities = 171/358 (47%), Positives = 236/358 (65%) Frame = -2 Query: 1638 DDTFSSYPHTQGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHAC 1459 +D + Q + LLM+NL +E++ AD+ +RLE DIL Q+ +LGAL+LFH+C Sbjct: 38 EDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNAVRLEGDILEQLERLGALRLFHSC 97 Query: 1458 LSRTLKTPSSVPMLIPVTDLPSDRLGEGLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXK 1279 LSRT+K+ +S + +D P++ + E KV V SG Sbjct: 98 LSRTIKSYTSFDL----SDGPTEIVEEC-------KVFVHSGKKELRKLRRKRTSDNESP 146 Query: 1278 ISGLSPIKTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLE 1099 SP KTISK R ARNE+++S G+K V LE+I+ LE Sbjct: 147 TIQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLE 206 Query: 1098 EASGKVASFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLE 919 + +G++AS S+WAEAAG+ +KELQQ LH+GW C+D+LLRS SLV+F+ARNY GLG+ E Sbjct: 207 QETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFIARNYSGLGVAFE 266 Query: 918 DLLQAGNMGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQ 739 DL+QAGN+GVLQG+ERFD +RG +FSTYVQYWIRK+MS VA+H+RG++IP +++ INQ Sbjct: 267 DLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRIPCTLSKVINQ 326 Query: 738 ILRARRALYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 + +AR+AL +GKYPDD EI++FTGLSVAK+ S SKC R+VGSID+K+G ++ K M Sbjct: 327 VHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIGEYMTTKYM 384 >ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine max] Length = 459 Score = 303 bits (777), Expect = 2e-79 Identities = 188/451 (41%), Positives = 268/451 (59%), Gaps = 5/451 (1%) Frame = -2 Query: 1899 TNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEALHREPLQPNTYSFGALKTMEN 1720 TNS P + VR ++ S P F EE EAL ++ + +S AL+T+EN Sbjct: 26 TNSPLCLSPSSAGVRETCFNFTRLSFPSTFY---EEGEALQKDFGRVFAFSSSALETLEN 82 Query: 1719 SSIAVED-KMKLGK----PLHNKVDDVPGTIEDDTFSSYPHTQGNNEYRYGLLMENLGKI 1555 S+ E+ ++ GK +H +D+ + + S ++ + LLMENL + Sbjct: 83 DSLGREETQVNKGKRSLSSVHKMIDNTQMPFGEVSTVSKKFESFRAQH-FRLLMENLCVL 141 Query: 1554 EEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPVTDLPSDRLGEG 1375 EE D+E +RLE+ I++Q+GKLGAL+LF+ CLSR+L T S V D Sbjct: 142 EETFVDSEALRLEKAIILQLGKLGALELFNVCLSRSLGT-SLVSNYADKVD--------- 191 Query: 1374 LTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKVPXXXXXXXXXXXXXX 1195 D KV+V+S S +K + Sbjct: 192 ---DYKDKVVVQSSKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSASLVKRAPNT 248 Query: 1194 XXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAGVDEKELQQRLH 1015 R+++A+ E+E+SKG+K + LE+I+ +EE + +VAS S+WAEA+GVDEK LQ+ LH Sbjct: 249 KNKRILVAKREAEMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLH 308 Query: 1014 FGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGCQFSTY 835 G+ C+D+L+RS RSLV++LAR YRG+GI L+DLLQAG +GVLQG+ERFD TRG +FSTY Sbjct: 309 RGYYCQDELIRSTRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTY 368 Query: 834 VQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHGKYPDDAEISRFTGLS 655 VQYWIRK++ + VA+++RGI IP ++NR INQI +AR+A+ H K PDD EI++ TGLS Sbjct: 369 VQYWIRKSILRVVARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDYEIAKMTGLS 428 Query: 654 VAKIRSTSKCPRIVGSIDKKVGYSISVKIMV 562 + KI+S S C RIV SID+KVG + V+ MV Sbjct: 429 LDKIKSASNCLRIVASIDQKVGDYLGVEYMV 459 >ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Glycine max] Length = 476 Score = 302 bits (773), Expect = 5e-79 Identities = 187/450 (41%), Positives = 267/450 (59%), Gaps = 5/450 (1%) Frame = -2 Query: 1899 TNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEALHREPLQPNTYSFGALKTMEN 1720 TNS P + VR ++ S P F EE EAL ++ + +S AL+T+EN Sbjct: 26 TNSPLCLSPSSAGVRETCFNFTRLSFPSTFY---EEGEALQKDFGRVFAFSSSALETLEN 82 Query: 1719 SSIAVED-KMKLGK----PLHNKVDDVPGTIEDDTFSSYPHTQGNNEYRYGLLMENLGKI 1555 S+ E+ ++ GK +H +D+ + + S ++ + LLMENL + Sbjct: 83 DSLGREETQVNKGKRSLSSVHKMIDNTQMPFGEVSTVSKKFESFRAQH-FRLLMENLCVL 141 Query: 1554 EEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPVTDLPSDRLGEG 1375 EE D+E +RLE+ I++Q+GKLGAL+LF+ CLSR+L T S V D Sbjct: 142 EETFVDSEALRLEKAIILQLGKLGALELFNVCLSRSLGT-SLVSNYADKVD--------- 191 Query: 1374 LTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKVPXXXXXXXXXXXXXX 1195 D KV+V+S S +K + Sbjct: 192 ---DYKDKVVVQSSKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSASLVKRAPNT 248 Query: 1194 XXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAGVDEKELQQRLH 1015 R+++A+ E+E+SKG+K + LE+I+ +EE + +VAS S+WAEA+GVDEK LQ+ LH Sbjct: 249 KNKRILVAKREAEMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLH 308 Query: 1014 FGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGCQFSTY 835 G+ C+D+L+RS RSLV++LAR YRG+GI L+DLLQAG +GVLQG+ERFD TRG +FSTY Sbjct: 309 RGYYCQDELIRSTRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTY 368 Query: 834 VQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHGKYPDDAEISRFTGLS 655 VQYWIRK++ + VA+++RGI IP ++NR INQI +AR+A+ H K PDD EI++ TGLS Sbjct: 369 VQYWIRKSILRVVARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDYEIAKMTGLS 428 Query: 654 VAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 + KI+S S C RIV SID+KVG + V+ M Sbjct: 429 LDKIKSASNCLRIVASIDQKVGDYLGVEYM 458 >ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Glycine max] Length = 551 Score = 302 bits (773), Expect = 5e-79 Identities = 187/450 (41%), Positives = 267/450 (59%), Gaps = 5/450 (1%) Frame = -2 Query: 1899 TNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEALHREPLQPNTYSFGALKTMEN 1720 TNS P + VR ++ S P F EE EAL ++ + +S AL+T+EN Sbjct: 26 TNSPLCLSPSSAGVRETCFNFTRLSFPSTFY---EEGEALQKDFGRVFAFSSSALETLEN 82 Query: 1719 SSIAVED-KMKLGK----PLHNKVDDVPGTIEDDTFSSYPHTQGNNEYRYGLLMENLGKI 1555 S+ E+ ++ GK +H +D+ + + S ++ + LLMENL + Sbjct: 83 DSLGREETQVNKGKRSLSSVHKMIDNTQMPFGEVSTVSKKFESFRAQH-FRLLMENLCVL 141 Query: 1554 EEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPVTDLPSDRLGEG 1375 EE D+E +RLE+ I++Q+GKLGAL+LF+ CLSR+L T S V D Sbjct: 142 EETFVDSEALRLEKAIILQLGKLGALELFNVCLSRSLGT-SLVSNYADKVD--------- 191 Query: 1374 LTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKVPXXXXXXXXXXXXXX 1195 D KV+V+S S +K + Sbjct: 192 ---DYKDKVVVQSSKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSASLVKRAPNT 248 Query: 1194 XXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAGVDEKELQQRLH 1015 R+++A+ E+E+SKG+K + LE+I+ +EE + +VAS S+WAEA+GVDEK LQ+ LH Sbjct: 249 KNKRILVAKREAEMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLH 308 Query: 1014 FGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGCQFSTY 835 G+ C+D+L+RS RSLV++LAR YRG+GI L+DLLQAG +GVLQG+ERFD TRG +FSTY Sbjct: 309 RGYYCQDELIRSTRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTY 368 Query: 834 VQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHGKYPDDAEISRFTGLS 655 VQYWIRK++ + VA+++RGI IP ++NR INQI +AR+A+ H K PDD EI++ TGLS Sbjct: 369 VQYWIRKSILRVVARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDYEIAKMTGLS 428 Query: 654 VAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 + KI+S S C RIV SID+KVG + V+ M Sbjct: 429 LDKIKSASNCLRIVASIDQKVGDYLGVEYM 458 >ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus] gi|449507267|ref|XP_004162982.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus] Length = 559 Score = 301 bits (771), Expect = 8e-79 Identities = 189/471 (40%), Positives = 273/471 (57%), Gaps = 6/471 (1%) Frame = -2 Query: 1959 MGIGSMLDLKWVFPTKSPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEAL 1780 MG +L+W F ++ L NS S P+ S + +EA++ S + S+ EE E++ Sbjct: 1 MGTSFRPNLRWGFQIQTHSLKNSPSKLSPHAS--KGREAAFNSGRLSFFSSIC-EEGESI 57 Query: 1779 HREPLQPNTYSFGALKTMENSSIAVED-KMKLGK----PLHNKVDDVPGTIEDDTFSSYP 1615 RE L+ T A +T N + +E+ +M G P+H + + +D FSS Sbjct: 58 PRETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCT 117 Query: 1614 HTQGNNEYRYGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTP 1435 +G+LMENL +EE ++ ++ LERDI++Q+ KLGAL+ F+ CLSRTLKT Sbjct: 118 SLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTS 177 Query: 1434 SSVPMLIPVTDLPSDRLGEGLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKI-SGLSPI 1258 S + D T D+ V V S KI S L Sbjct: 178 SFHDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKIASRLLTT 237 Query: 1257 KTISKVPXXXXXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVA 1078 + + + RL++A NE+E+S G+K V LERI++TLE+ SG++A Sbjct: 238 RAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIA 297 Query: 1077 SFSSWAEAAGVDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGN 898 S S WAEAA VD K+LQ++L FG C+D+LLRS SLV+FLA+ YR G+P+EDL+QAG Sbjct: 298 SMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGA 357 Query: 897 MGVLQGSERFDHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRA 718 +GVLQG ERFD RG + STY+QYWIRK+MS+ VA++SRGIQIP ++ + INQI +AR+ Sbjct: 358 LGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKV 417 Query: 717 LYGVHGKYPDDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 L +Y DD +I+R TGL +AK+R S C ++VGS D+K+G +++K M Sbjct: 418 LNHSGRRYSDD-DIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYM 467 >ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cicer arietinum] Length = 545 Score = 287 bits (735), Expect = 1e-74 Identities = 177/442 (40%), Positives = 257/442 (58%), Gaps = 1/442 (0%) Frame = -2 Query: 1911 SPLLTNSSSSTRPYFSSVRSKEASYESASMPILFSVSPEESEALHREPLQPNTYSFGALK 1732 SP SS+ SS +E + + +L +V EE E L ++ + +S AL+ Sbjct: 15 SPHFFTSSTIFLSSSSSAGGREVFFNPTRLSLLSTVY-EEGETLQKDFGKTFAFSSSALE 73 Query: 1731 TMENSSIAVE-DKMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGNNEYRYGLLMENLGKI 1555 E + E K+ GK + V + I D+T + E +GLLMENLG + Sbjct: 74 VPEMDLLQGEVTKVNKGKRSLSSVHE----IIDNTQLPF------GEPHFGLLMENLGIL 123 Query: 1554 EEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPVTDLPSDRLGEG 1375 EE AD+E +RLE+DI++++ KLGAL+LF+ CL+R+ T + V + ++ Sbjct: 124 EETFADSEAMRLEKDIVLKLEKLGALELFNVCLTRSFGTSTESNCTDVVLEHVKEKKRNF 183 Query: 1374 LTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKVPXXXXXXXXXXXXXX 1195 + GKV+V+S L + P Sbjct: 184 KVDNYTGKVVVQSKRKENRTRRKQASVAITTSFQSLPLEDNNQEGPLRLPASLVKRVSNT 243 Query: 1194 XXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAGVDEKELQQRLH 1015 R VIA+ E E+SKG+K + LE++K +EE + + S SSWAEA+GVDE LQ++L+ Sbjct: 244 NNRRAVIAQREVEMSKGVKVLAELEKMKTAIEEDTKQAVSLSSWAEASGVDENVLQRQLY 303 Query: 1014 FGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERFDHTRGCQFSTY 835 G+ C+D+L+RS RSLV++ AR YRG+GI LEDLLQ G +GVLQG+ERFD TRG +FSTY Sbjct: 304 HGYYCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAERFDSTRGYRFSTY 363 Query: 834 VQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHGKYPDDAEISRFTGLS 655 VQYWIRK+MS+ VA+++RGI IP ++N+ I+QI +AR+ L KYPDD EI++ TGLS Sbjct: 364 VQYWIRKSMSRMVARYARGITIPWSMNKAISQIQKARKLLKSTSMKYPDDHEIAKMTGLS 423 Query: 654 VAKIRSTSKCPRIVGSIDKKVG 589 + +IRS S C RIV S+++K+G Sbjct: 424 LDRIRSASHCMRIVSSMNQKMG 445 >ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297323785|gb|EFH54206.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 568 Score = 284 bits (726), Expect = 1e-73 Identities = 190/462 (41%), Positives = 258/462 (55%), Gaps = 8/462 (1%) Frame = -2 Query: 1926 VFPTKSPLLTNSSSSTR------PYFSSVRSKEASYESASMPILFSVSPEESEALHREPL 1765 VF PL+ + S R P F VR +S+ + L SV EES ++PL Sbjct: 47 VFVPPHPLIKHWLSLLRCDQTSFPIF--VRIPVSSFVATRWSFLSSVK-EESRIYQKDPL 103 Query: 1764 QPNTYSFGALKTMENSSIAVED-KMKLGKPLHNKVDDVPGTIEDDTFSSYPHTQGNNEYR 1588 + S A T EN + ++D K +G G+ E S + + Sbjct: 104 KACASS--APYTAENVFLELKDPKENIGV----------GSAEKSCSS-------RSMLQ 144 Query: 1587 YGLLMENLGKIEEIIADTELIRLERDILMQIGKLGALKLFHACLSRTLKTPSSVPMLIPV 1408 Y LL +NL +EE + R+ERDI++Q+GKLGA LF CLSR+ + S L Sbjct: 145 YNLLAKNLLALEETFVALDSARMERDIMLQMGKLGAADLFKTCLSRS-RGSSVASCLSDT 203 Query: 1407 TDLPSDRLGEGLTIDRAGKVIVRSGXXXXXXXXXXXXXXXXXKISGLSPIKTISKVPXXX 1228 T+L + + + K+ ++ GL VP Sbjct: 204 TELVGTTPNQQVFVSSRRKLKKKARRSTVTAENGDQGSLPM----GLRTTWNNIDVPRVR 259 Query: 1227 XXXXXXXXXXXXXXRLVIARNESELSKGIKDVTYLERIKKTLEEASGKVASFSSWAEAAG 1048 I++NE+E+S G+K V +ERI+ LEE SGKVAS S WAEAAG Sbjct: 260 RPPKYRKKRER------ISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAG 313 Query: 1047 VDEKELQQRLHFGWSCKDKLLRSARSLVMFLARNYRGLGIPLEDLLQAGNMGVLQGSERF 868 ++EK L + LH+GW C+D+LL+S RSLV+FLARNYRGLGI EDL+QAG +GVLQG+ERF Sbjct: 314 MNEKLLMRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERF 373 Query: 867 DHTRGCQFSTYVQYWIRKAMSKFVAQHSRGIQIPMAVNRTINQILRARRALYGVHG-KYP 691 DHTRG +FSTYVQYWIRK+MS V++H+RG+ IP ++ RTINQI +AR+ L HG KYP Sbjct: 374 DHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYP 433 Query: 690 DDAEISRFTGLSVAKIRSTSKCPRIVGSIDKKVGYSISVKIM 565 D +IS+ T LSV KIR+ ++C ++VGSI+KKVG S K + Sbjct: 434 ADEDISKLTSLSVKKIRAANQCLKVVGSIEKKVGDCFSTKFL 475