BLASTX nr result
ID: Cocculus22_contig00005090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00005090
(804 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei... 162 1e-37
ref|XP_004301228.1| PREDICTED: cold-inducible RNA-binding protei... 162 2e-37
ref|XP_007210100.1| hypothetical protein PRUPE_ppa019414mg, part... 160 4e-37
gb|EYU17791.1| hypothetical protein MIMGU_mgv1a014503mg [Mimulus... 156 7e-36
gb|AFK40678.1| unknown [Lotus japonicus] 156 1e-35
ref|XP_007152596.1| hypothetical protein PHAVU_004G143300g [Phas... 154 4e-35
ref|XP_006478116.1| PREDICTED: glycine-rich RNA-binding protein ... 153 8e-35
ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein ... 153 8e-35
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin... 153 8e-35
ref|XP_002318331.1| RNA recognition motif-containing family prot... 152 1e-34
ref|XP_006441346.1| hypothetical protein CICLE_v10022555mg [Citr... 152 2e-34
ref|XP_006855610.1| hypothetical protein AMTR_s00044p00073410 [A... 148 2e-33
ref|XP_006340998.1| PREDICTED: cold-inducible RNA-binding protei... 145 2e-32
ref|XP_004246450.1| PREDICTED: RNA-binding motif protein, X chro... 142 1e-31
gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japo... 137 5e-30
gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indi... 137 5e-30
ref|XP_006390546.1| hypothetical protein EUTSA_v10019191mg [Eutr... 135 1e-29
ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitoch... 131 3e-28
emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis] 130 4e-28
ref|XP_004976601.1| PREDICTED: glycine-rich RNA-binding protein-... 129 1e-27
>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product
[Vitis vinifera]
Length = 170
Score = 162 bits (411), Expect = 1e-37
Identities = 89/117 (76%), Positives = 95/117 (81%), Gaps = 2/117 (1%)
Frame = -2
Query: 608 RNGRLL--VACVNXXXXXXXXXXXKLYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRI 435
RNG L VAC+ +LYVSGLSFRTTEESLRNAF+ FGQLVEVNLVMD+I
Sbjct: 56 RNGNDLFAVACLPSSPNQPSIPKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKI 115
Query: 434 ANRPRGFAFLCYATEEESKKAIEGMHGKFLDGRVIFVEVAKPRSELRQNLKQTPRRY 264
ANRPRGFAFL Y+TEEES+KAIEGMHGKFLDGRVIFVEVAKPRSELRQN Q RRY
Sbjct: 116 ANRPRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPRSELRQN--QNQRRY 170
>ref|XP_004301228.1| PREDICTED: cold-inducible RNA-binding protein-like [Fragaria vesca
subsp. vesca]
Length = 166
Score = 162 bits (409), Expect = 2e-37
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAFQNFG+LVEVNLVMDRIANRPRGFAFL Y TEEES+KAI+GM
Sbjct: 75 LYVSGLSFRTTEESLRNAFQNFGRLVEVNLVMDRIANRPRGFAFLRYETEEESQKAIKGM 134
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTPRRY 264
HGKFLDGRVIFVE AKPRSELRQ +Q PR+Y
Sbjct: 135 HGKFLDGRVIFVEEAKPRSELRQTPRQNPRQY 166
>ref|XP_007210100.1| hypothetical protein PRUPE_ppa019414mg, partial [Prunus persica]
gi|462405835|gb|EMJ11299.1| hypothetical protein
PRUPE_ppa019414mg, partial [Prunus persica]
Length = 129
Score = 160 bits (406), Expect = 4e-37
Identities = 81/87 (93%), Positives = 83/87 (95%)
Frame = -2
Query: 524 LSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGMHGKFL 345
LSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFL YATEEES+KAIEGMHGKFL
Sbjct: 43 LSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFL 102
Query: 344 DGRVIFVEVAKPRSELRQNLKQTPRRY 264
DGRVIFVEVAKPRSELRQ KQ PR+Y
Sbjct: 103 DGRVIFVEVAKPRSELRQTPKQNPRQY 129
>gb|EYU17791.1| hypothetical protein MIMGU_mgv1a014503mg [Mimulus guttatus]
Length = 187
Score = 156 bits (395), Expect = 7e-36
Identities = 75/89 (84%), Positives = 84/89 (94%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
L+VSGLSFRTTEESL NAF+NFG+L EVNLVMD+IANRPRGFAFL YATEEESKKAIEGM
Sbjct: 98 LFVSGLSFRTTEESLTNAFKNFGELTEVNLVMDKIANRPRGFAFLAYATEEESKKAIEGM 157
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTP 273
HGKFLDGRVIFVE+AKPR+ELRQ +++ P
Sbjct: 158 HGKFLDGRVIFVEIAKPRAELRQGIRRNP 186
>gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 156 bits (394), Expect = 1e-35
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRN F+NFGQLV+VNLVMD++ANRPRGFAFL YATEEES+KAIEGM
Sbjct: 96 LYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGM 155
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQ 279
HGKFLDGRVIFVEVAKPRSELRQ +Q
Sbjct: 156 HGKFLDGRVIFVEVAKPRSELRQRFQQ 182
>ref|XP_007152596.1| hypothetical protein PHAVU_004G143300g [Phaseolus vulgaris]
gi|561025905|gb|ESW24590.1| hypothetical protein
PHAVU_004G143300g [Phaseolus vulgaris]
Length = 188
Score = 154 bits (389), Expect = 4e-35
Identities = 78/90 (86%), Positives = 83/90 (92%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAF+NFGQLVEV LVMDRIANRPRGFAFL YATEEES+KAIEGM
Sbjct: 98 LYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGM 157
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTPR 270
HGKFLDGRVIFVE+AKPRSEL Q ++ R
Sbjct: 158 HGKFLDGRVIFVEIAKPRSELPQRHREGTR 187
>ref|XP_006478116.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 171
Score = 153 bits (386), Expect = 8e-35
Identities = 75/91 (82%), Positives = 84/91 (92%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
L+VSGLSFRT+E+SLRNAFQ FGQLVEVNLVMD+IANRPRGFAFL YATEEES++AIEGM
Sbjct: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEGM 139
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTPRR 267
HGKFLDGRVIFVE+AK R+ELRQ K PR+
Sbjct: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
>ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 183
Score = 153 bits (386), Expect = 8e-35
Identities = 75/87 (86%), Positives = 81/87 (93%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAF+NFGQLVEVNLVMD++ANRPRGF FL Y TEEESKKAIEGM
Sbjct: 94 LYVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKVANRPRGFGFLRYETEEESKKAIEGM 153
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQ 279
HGKFLDGRVIFVEVAKPRS+++Q Q
Sbjct: 154 HGKFLDGRVIFVEVAKPRSKIQQRFNQ 180
>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 153 bits (386), Expect = 8e-35
Identities = 78/90 (86%), Positives = 82/90 (91%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAF+NFGQLVEV LVMDRIANRPRGFAFL YATEEES+KAIEGM
Sbjct: 90 LYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGM 149
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTPR 270
HGKFLDGRVIFVEVAKPRSEL ++ R
Sbjct: 150 HGKFLDGRVIFVEVAKPRSELAPRKQEDTR 179
>ref|XP_002318331.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222859004|gb|EEE96551.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 181
Score = 152 bits (384), Expect = 1e-34
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAFQNFGQLV+VNLVMD++A RPRGFAFL Y TEEE++KAIEGM
Sbjct: 92 LYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEGM 151
Query: 359 HGKFLDGRVIFVEVAKPRSELRQN 288
HGKFLDGRVIFVEVAKPRSELRQ+
Sbjct: 152 HGKFLDGRVIFVEVAKPRSELRQS 175
>ref|XP_006441346.1| hypothetical protein CICLE_v10022555mg [Citrus clementina]
gi|567897718|ref|XP_006441347.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
gi|557543608|gb|ESR54586.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
gi|557543609|gb|ESR54587.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
Length = 171
Score = 152 bits (383), Expect = 2e-34
Identities = 74/91 (81%), Positives = 84/91 (92%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
L+VSGLSFRT+E+SLRNAFQ FGQLVEVNL+MD+IANRPRGFAFL YATEEES++AIEGM
Sbjct: 80 LFVSGLSFRTSEDSLRNAFQGFGQLVEVNLMMDKIANRPRGFAFLRYATEEESRRAIEGM 139
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTPRR 267
HGKFLDGRVIFVE+AK R+ELRQ K PR+
Sbjct: 140 HGKFLDGRVIFVEIAKSRAELRQAFKNNPRQ 170
>ref|XP_006855610.1| hypothetical protein AMTR_s00044p00073410 [Amborella trichopoda]
gi|548859397|gb|ERN17077.1| hypothetical protein
AMTR_s00044p00073410 [Amborella trichopoda]
Length = 170
Score = 148 bits (374), Expect = 2e-33
Identities = 74/92 (80%), Positives = 84/92 (91%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAF+NFGQLVEV LVMD+ ANRPRGFAFL YATEEES++AIEGM
Sbjct: 79 LYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDKRANRPRGFAFLEYATEEESRQAIEGM 138
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQTPRRY 264
HGKFLDGRVIFVEVAK +SEL+++ + P +Y
Sbjct: 139 HGKFLDGRVIFVEVAKSKSELQKSFNRFPPQY 170
>ref|XP_006340998.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
tuberosum]
Length = 163
Score = 145 bits (366), Expect = 2e-32
Identities = 72/83 (86%), Positives = 79/83 (95%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
L+VSGLSFRTTEESLR AF NFG+LVEVNL+MD+IANRPRGFAF+ YATEEES+KAIEGM
Sbjct: 72 LFVSGLSFRTTEESLRKAFNNFGELVEVNLMMDKIANRPRGFAFIRYATEEESQKAIEGM 131
Query: 359 HGKFLDGRVIFVEVAKPRSELRQ 291
HGKFLDGRVIFVEVAK RSELR+
Sbjct: 132 HGKFLDGRVIFVEVAKSRSELRR 154
>ref|XP_004246450.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Solanum
lycopersicum]
Length = 160
Score = 142 bits (359), Expect = 1e-31
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
L+VSGLSFRTTEESLR F +FG+LVEVNL+MD+IANRPRGFAF+ YATEEES+KAIEGM
Sbjct: 72 LFVSGLSFRTTEESLRKTFNHFGELVEVNLMMDKIANRPRGFAFIRYATEEESQKAIEGM 131
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLK 282
HGKFLDGRVIFVEVAK RSELR+ K
Sbjct: 132 HGKFLDGRVIFVEVAKSRSELRRGPK 157
>gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 137 bits (345), Expect = 5e-30
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAF+ FGQL EVNLVM+R+A RPRGFAFL YA+EEESK A+EGM
Sbjct: 69 LYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGM 128
Query: 359 HGKFLDGRVIFVEVAKPRSEL 297
GKFLDGRVIFVEVA+ RSEL
Sbjct: 129 QGKFLDGRVIFVEVARQRSEL 149
>gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 137 bits (345), Expect = 5e-30
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTEESLRNAF+ FGQL EVNLVM+R+A RPRGFAFL YA+EEESK A+EGM
Sbjct: 72 LYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGM 131
Query: 359 HGKFLDGRVIFVEVAKPRSEL 297
GKFLDGRVIFVEVA+ RSEL
Sbjct: 132 QGKFLDGRVIFVEVARQRSEL 152
>ref|XP_006390546.1| hypothetical protein EUTSA_v10019191mg [Eutrema salsugineum]
gi|557086980|gb|ESQ27832.1| hypothetical protein
EUTSA_v10019191mg [Eutrema salsugineum]
Length = 187
Score = 135 bits (341), Expect = 1e-29
Identities = 66/83 (79%), Positives = 76/83 (91%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYVSGLSFRTTE++LR AF+ FG+LV VNLVMD++ANRPRGFAFL Y TEEES KAIEGM
Sbjct: 84 LYVSGLSFRTTEDNLRKAFEQFGKLVFVNLVMDKVANRPRGFAFLRYETEEESMKAIEGM 143
Query: 359 HGKFLDGRVIFVEVAKPRSELRQ 291
HGKFLDGRVIFVE AKPRS++++
Sbjct: 144 HGKFLDGRVIFVEEAKPRSDIQR 166
>ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 131 bits (330), Expect = 3e-28
Identities = 69/87 (79%), Positives = 77/87 (88%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LY+SGLSFRTTEESLRNAF++FGQLVEVNLVMDR+ANRPRGFAFL YA+EEES+KAIEGM
Sbjct: 91 LYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAIEGM 150
Query: 359 HGKFLDGRVIFVEVAKPRSELRQNLKQ 279
HGK FVEVAK RSELRQ L++
Sbjct: 151 HGK-----GDFVEVAKSRSELRQGLEE 172
>emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 130 bits (328), Expect = 4e-28
Identities = 63/76 (82%), Positives = 69/76 (90%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
L++ GLSFRTTEESLR+AF+ FGQL EVNLVMDR+A RPRGFAFL YA EEESK A+EGM
Sbjct: 118 LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGM 177
Query: 359 HGKFLDGRVIFVEVAK 312
HGKFLDGRVIFVEVAK
Sbjct: 178 HGKFLDGRVIFVEVAK 193
>ref|XP_004976601.1| PREDICTED: glycine-rich RNA-binding protein-like [Setaria italica]
Length = 147
Score = 129 bits (324), Expect = 1e-27
Identities = 65/81 (80%), Positives = 69/81 (85%)
Frame = -2
Query: 539 LYVSGLSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLCYATEEESKKAIEGM 360
LYV GLSFRTTEESLRNAF+ FG L EVNLVMDR A RPRGFAF+ YA EE++K AIEGM
Sbjct: 67 LYVHGLSFRTTEESLRNAFEKFGDLTEVNLVMDRAAKRPRGFAFVSYADEEQTKTAIEGM 126
Query: 359 HGKFLDGRVIFVEVAKPRSEL 297
HGKFLDGRVIFVEVAK R L
Sbjct: 127 HGKFLDGRVIFVEVAKRRPGL 147