BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005083
         (3690 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu...   972   0.0  
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,...   983   0.0  
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...   996   0.0  
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...   999   0.0  
emb|CBI37948.3| unnamed protein product [Vitis vinifera]              999   0.0  
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi...   996   0.0  
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr...   990   0.0  
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,...   984   0.0  
ref|XP_007199677.1| hypothetical protein PRUPE_ppa000631mg [Prun...   960   0.0  
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]     976   0.0  
ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containi...   914   0.0  
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi...   959   0.0  
ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [A...   947   0.0  
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi...   906   0.0  
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi...   938   0.0  
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi...   938   0.0  
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi...   936   0.0  
gb|EYU37881.1| hypothetical protein MIMGU_mgv1a002592mg [Mimulus...   926   0.0  
ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containi...   924   0.0  
ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containi...   904   0.0  

>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
            gi|550341229|gb|EEE86674.2| hypothetical protein
            POPTR_0004s17400g [Populus trichocarpa]
          Length = 1104

 Score =  972 bits (2512), Expect(2) = 0.0
 Identities = 472/661 (71%), Positives = 568/661 (85%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDM+K+YH KFF  C+SQKA+KEAFRF  L+ NPTLSTFNML+SVCA+SQ+S GAF+V
Sbjct: 444  GLLDMNKVYHVKFFKLCRSQKAVKEAFRFCKLVQNPTLSTFNMLMSVCATSQNSAGAFEV 503

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            LQL K  GLKADCKLYTTLISTCAKSGKVD+MFEVFH+MVNAGVEPN+HTYGALIDGCAR
Sbjct: 504  LQLAKAVGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGALIDGCAR 563

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVL+EM  E+ PIDPDH
Sbjct: 564  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMTGEAQPIDPDH 623

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +TVGALIK C  AG+ DRA++VY M+H+YNIKGTPEVYTIA+NSCS+ GDW+FA +VY+D
Sbjct: 624  ITVGALIKACTNAGQVDRAQEVYNMVHKYNIKGTPEVYTIAINSCSQIGDWEFACKVYDD 683

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MTR GVVPDEMF+SALIDVAGHAGK+DAA +++Q A+ +G +LG + YSSLMGAC NA+N
Sbjct: 684  MTRKGVVPDEMFLSALIDVAGHAGKMDAAFEIIQVAKAKGAQLGIIPYSSLMGACCNAKN 743

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQK L++YEDIK++K++PT +T+NALI+ALC+GDQL KA+EVL+EMK  G+ PNT+TY+I
Sbjct: 744  WQKGLELYEDIKSMKIKPTVATMNALITALCDGDQLPKALEVLSEMKAWGLRPNTITYSI 803

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            L VASE+KD+LE GLML SQAKKD V P  I  KC++SMCLR+F+ A +LGE +L+FNSG
Sbjct: 804  LSVASERKDDLEAGLMLLSQAKKDCVAPTLIMSKCIISMCLRKFENACTLGEAVLSFNSG 863

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            + QI+NKWTS+AL VYR  + AG  PT+E++S VLGCLQ   D++L+ R +ENLGV   +
Sbjct: 864  RAQIENKWTSVALMVYRGTMAAGEKPTIELVSQVLGCLQIPCDATLKNRLVENLGVTAVS 923

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            SR SN+ SL+DGFGEYDPR+FSLLEEAASLGIVPCVSFK SPI +DA++ ++H  EVY +
Sbjct: 924  SRYSNLCSLVDGFGEYDPRAFSLLEEAASLGIVPCVSFKESPITMDAKQLQIHIAEVYFL 983

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            TILKGLKHRLAAGAKLPNVTILLPVE  Q  T +G KTI VAGR+ +AV +LLRRLGLPY
Sbjct: 984  TILKGLKHRLAAGAKLPNVTILLPVEKAQVITLEGEKTINVAGRISRAVASLLRRLGLPY 1043

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ESYGKIRING++++RW QPKL SPF G P E ++S +RL K I+ QQRNIRT   S+
Sbjct: 1044 QGNESYGKIRINGISLRRWLQPKLDSPFSGKPGEWSTSLSRLGKGISFQQRNIRTGDFSL 1103

Query: 3325 E 3327
            E
Sbjct: 1104 E 1104



 Score = 99.4 bits (246), Expect(2) = 0.0
 Identities = 120/412 (29%), Positives = 170/412 (41%), Gaps = 32/412 (7%)
 Frame = +3

Query: 171  REFLGS-GHRL-RPP---GLTSRRKCNKFGFQIHRH-RFLCRASLISEPXXXXXXXXXXX 332
            R+F+G  GH L RPP   GL  R +  K   Q + + RF+ +ASL +             
Sbjct: 26   RQFIGCFGHNLIRPPSSAGLLLRYRGRKLRVQRNGNKRFVVKASLDANSVLVVVAVTAFS 85

Query: 333  XXXXXYL-KYIRR--RDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEFTA 503
                 Y  +YI    ++  K  S S  +        S+LGR +V Q   +  L  G    
Sbjct: 86   ALSLAYYNRYINSNIKNSKKITSSSIQVLGSPSFAFSQLGRSIVNQITGSQFLHFGGLHR 145

Query: 504  EVSVIKRNLKIEKTRENVLTSEEGD--VQNQRTALMH-EEILISEASAKERKAIGSNL-- 668
            E   ++    +EK  EN    EE +  VQ Q TA +H   +LI    +     + +N+  
Sbjct: 146  EAREVESQGSVEKASENSHEFEEKETHVQFQETASLHGSSLLIKAVESSGANFVAANVCD 205

Query: 669  ----------------RPLVADEFSVHEPLDFAAEMPEFQPKKCPVEVALGSELPGQEVE 800
                             P V  E     PL FA +M E   +K   E+  GSEL G   +
Sbjct: 206  TVVVEESEVGDARVSPLPSVLSESGSALPLIFATQMTELTQEKSGEEIEFGSELSGSVEK 265

Query: 801  LVPSASPVSLRYATIEKNEDYKQSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRS 980
            +  +A  V +   +IEK E                Y+     S RE+LYTFY  + S   
Sbjct: 266  VKSNAVLVPVDNESIEKAE-------------LSSYNGAISQSVREDLYTFYGANRSVVK 312

Query: 981  AVSNLRNLNATSPSSLQHSTRLSSLLRPNALKGVE-ASQGSFHTSVHQQGQMPLAHYGKG 1157
            + SNL     +S +SL  S R SSL     L+  + +SQ     + H Q  MP AHY  G
Sbjct: 313  SASNLGLKETSSHASLLKSKRFSSLKMNTGLETEDLSSQQPLQAADHVQKTMPPAHYEGG 372

Query: 1158 SYRKGKHFSKGLEFPRDVGNGFQPQNSQREQAKSPQINGRRTTNK-HDPSEY 1310
            S+    H SK L   ++  +  Q  +S+  Q  SP  NG  +  K H P EY
Sbjct: 373  SF----HKSKNLPGSKERKHPIQDSHSKLRQLPSP--NGIPSKVKDHPPEEY 418


>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1129

 Score =  983 bits (2542), Expect(2) = 0.0
 Identities = 480/660 (72%), Positives = 569/660 (86%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDM KIYHAKFF  CK QKA+KEAFRF  L+ NP+LSTFNML+SVC+SSQDS+GAF+V
Sbjct: 469  GLLDMSKIYHAKFFKICKIQKAVKEAFRFCKLVPNPSLSTFNMLMSVCSSSQDSDGAFEV 528

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            L+L + AGLKADCKLYTTLISTCAKSGKVD+MFEVFH+MVNAGVEPN+HTYG+LIDGCA+
Sbjct: 529  LRLAQGAGLKADCKLYTTLISTCAKSGKVDAMFEVFHEMVNAGVEPNVHTYGSLIDGCAK 588

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQ+AKAFGAYGILRSK VKPDRV+FNALITACGQSGAVDRAFDVL+EM AE+ PIDPDH
Sbjct: 589  AGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAETHPIDPDH 648

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +TVGAL+K C +AG+ DRA++VY M+H+YNIKGTPEVYTIAVN CS+TGDW+FA  VY+D
Sbjct: 649  ITVGALMKACAKAGQVDRAKEVYNMLHKYNIKGTPEVYTIAVNFCSQTGDWEFARSVYDD 708

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MTR GV PDEMF+SAL+DVAGHAG +D A + LQEAR +GT+LG V YSSLMGACSNA+N
Sbjct: 709  MTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEARTQGTQLGIVPYSSLMGACSNAKN 768

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YEDIKAIKL+PT ST+NAL++ALC+GDQL KA+E L+EMK  G+CPN VTY+I
Sbjct: 769  WQKALELYEDIKAIKLKPTVSTMNALMTALCDGDQLQKALETLSEMKSFGLCPNIVTYSI 828

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVASE+KD+L+ G ML SQAK+D + P  +  KC++ MCLRR+K+A SLGE IL+F+SG
Sbjct: 829  LLVASERKDDLDAGDMLLSQAKEDCITPTFLMYKCIIGMCLRRYKKACSLGESILSFDSG 888

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQI N+WTS ALTVYRE I AG  PTMEV+S VLGCLQ   D+SL+ R +ENLGV  D 
Sbjct: 889  RPQIKNEWTSRALTVYRETIAAGEKPTMEVVSQVLGCLQLPCDASLKGRLVENLGVTADP 948

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            S+ SN+ +L+DGFGEYDPR+FSLLEEAASLG VPC SFK SPI++DA+  + H  EVYL+
Sbjct: 949  SKFSNLCALVDGFGEYDPRAFSLLEEAASLGTVPCASFKESPIVMDAKLLQSHIAEVYLL 1008

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            TILKGLKHRLAAGAKLPN+TILLP E TQ +T KG KTI +AGR+ Q V +LLRRLGLPY
Sbjct: 1009 TILKGLKHRLAAGAKLPNITILLPTEMTQIKTLKGEKTINLAGRISQDVASLLRRLGLPY 1068

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ESYGKIRING++++RW QPKLASPF G P EL+ S +R+ K IT QQRNIRT  LS+
Sbjct: 1069 QGNESYGKIRINGISLRRWLQPKLASPFSGKPEELSFSLSRIGKGITHQQRNIRTGNLSL 1128



 Score = 84.7 bits (208), Expect(2) = 0.0
 Identities = 112/437 (25%), Positives = 175/437 (40%), Gaps = 53/437 (12%)
 Frame = +3

Query: 171  REFLGSGHRLRPPGLTS-----RRKCNKFGFQIHRHRFLCRASLISEPXXXXXXXXXXXX 335
            R+FLG  H LRPPG  S     + K  K   +      L  AS   +             
Sbjct: 32   RQFLGCSHNLRPPGSASPLRGRKSKKIKIREKNQSQSLLINASFRLDSVLVVVAVSTFSA 91

Query: 336  XXXXYLKY-IRRRDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEF---TA 503
                YL +    +++ K  +  E L    G  LS+LG+++V   + +  L +G     T+
Sbjct: 92   LSFAYLHHHFTNKNNKKRKTSKEDL----GDGLSQLGKNIVNNIVRSPFLDVGHLHKVTS 147

Query: 504  EVSVIKRNLKIEKTREN--------------VLTSEEGDVQNQ--RTALMHEEILISEAS 635
                +K    ++  REN              ++ S E D  +     AL +E  ++ E++
Sbjct: 148  TTLEVKSKDLVDNARENSYVIENVLPNETSVLVESTESDKNSYVIENALSNETSVLVEST 207

Query: 636  AKERKA----IGSNLRPLVADEFS------------VHE-----PLDFAAEMPEFQPKKC 752
              +  +    + SN+   V  + S            +H      PL+FA E+ E   ++ 
Sbjct: 208  ESDNNSADFTVSSNVCTYVVSKQSDNASVLLDPVPVIHGSESVLPLEFARELSELTIERS 267

Query: 753  PVEVALGSELPGQEVELVPSASPVSLRYATIEKNEDYKQS--RHEVGK--GVEPPYDCLF 920
              E  + SEL  Q +E               EK+ D   S    E+GK  G+   YD + 
Sbjct: 268  RDETEVDSELT-QLLE---------------EKSNDTASSTMNDEIGKKDGISSYYD-IT 310

Query: 921  KSSTREELYTFYEEDLSGRSAVSNLRNLNATSPSSLQHSTRLSSLLRPNALKGVEA---S 1091
            K S RE+LY FYEE  S   + SNL  L+  S  +        S L+ N + G EA   S
Sbjct: 311  KKSAREDLYKFYEESQSTEKSPSNLNGLDTVSSHAAPLIGNNISSLKVNGV-GKEAELLS 369

Query: 1092 QGSFHTSVHQQGQMPLAHYGKGSYRKGKHFSKGLEFPRDVGNGFQPQNSQREQAKSPQIN 1271
              S   +   + ++ LA Y +G+ RK +H      FPR+   G   Q+      + P  N
Sbjct: 370  PQSPQFAETVERKVHLARYERGASRKNEHIGGRRGFPREKEKGHVIQDEHTNLPEFPYPN 429

Query: 1272 GRRTTNKHDPSEYLKTY 1322
            G  +TNK   +E +  Y
Sbjct: 430  GVHSTNKDHKAEQVHGY 446


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score =  996 bits (2574), Expect(2) = 0.0
 Identities = 477/661 (72%), Positives = 578/661 (87%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDMDK+YHA+FFN CKSQKAIKEAFRF  L+ NPTLSTFNML+SVCASS+DSEGAF+V
Sbjct: 414  GLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQV 473

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            L+LV+EAGLKADCKLYTTLI+TCAKSGKVD+MFEVFH+MVNAG+EPN+HTYGALIDGCA+
Sbjct: 474  LRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAK 533

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVL+EM AE  P+DPDH
Sbjct: 534  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDH 593

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  AG+ DRAR+VY+MIH+YNIKGTPEVYTIA+N CS+TGDW+FA  VY+D
Sbjct: 594  ITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDD 653

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MT+ GV+PDE+F+SALID AGHAGK++AA ++LQEA+ +G  +G ++YSSLMGACSNA+N
Sbjct: 654  MTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 713

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YE +K+IKL+PT ST+NALI+ALC+GD+L K +EVL++MK  G+CPNT+TY+I
Sbjct: 714  WQKALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSI 773

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVA E+KD++E GLML SQAK+DGV+P  +  KC++ MC RR+++A +L E +L+FNSG
Sbjct: 774  LLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSG 833

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQI+NKWTSL L VYRE I+AG +PT+EV+S VLGCLQ  +++ +R R +ENLGV  DA
Sbjct: 834  RPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADA 893

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
             + SN+ SL+DGFGEYDPR+FSLLEEAAS GIVPCVSFK SP++VDARK ++HT +VYL+
Sbjct: 894  LKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEIHTAKVYLL 953

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            TILKGL+HRLAAGAKLPNV ILLPVE TQ  +  G KTI +A R  QA+ ALLRRLGLPY
Sbjct: 954  TILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPY 1013

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ SYGKIRINGLA+KRWFQPKLASPF G P EL  SS +L K IT QQRNIRT  LS+
Sbjct: 1014 QGNGSYGKIRINGLALKRWFQPKLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSL 1071

Query: 3325 E 3327
            E
Sbjct: 1072 E 1072



 Score = 66.6 bits (161), Expect(2) = 0.0
 Identities = 97/383 (25%), Positives = 147/383 (38%), Gaps = 8/383 (2%)
 Frame = +3

Query: 198  LRPPGLTSRRKCNKFGFQIHRH--RFLCRASLISEPXXXXXXXXXXXXXXXXY-LKYIRR 368
            LRP     RRKCN  G  +H    +FL +ASL S P                + L Y+  
Sbjct: 44   LRPQTPPPRRKCNSLGLLLHTRSPQFLVKASLRSPPNSVLIAVIVALATFAAFSLAYLNH 103

Query: 369  RDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEFTAEVSVIKRNLKIEKTR 548
                +  + S+ +S  K     +LG D V   IE  I+ +     E      +L +E   
Sbjct: 104  FLQNRRKNSSKQVSDSKIRGTRQLGSDAVDDIIENQIVRISSGENE------SLMMEIGG 157

Query: 549  ENVLTSEEGDVQNQRTALMHEEILISEASAK---ERKAIGSNLRPLVADEFSVHEPLDFA 719
             N ++ E  +   Q T  + +   ++E S     +         P +  +    +P  FA
Sbjct: 158  SNQVSEERTE---QETTFVPDCTYLTETSVSIGTDSFVSPQECPPFMLSDSGGVQPHSFA 214

Query: 720  AEMPEFQPKKCPVEVALGSELPGQEVELVPSASPVSLRYATIEKNEDYKQSRHEVGKGVE 899
             EM E Q         LG E    E          S   + +E +   + S   V  GV 
Sbjct: 215  TEMSELQ---------LGKEKKDIE----------SCESSVLENDAHAEVSVPTVSYGV- 254

Query: 900  PPYDCLFKSSTREELYTFYEEDLSGRSAVSNLRNLNA-TSPSSLQHSTRLSSLLRPNALK 1076
                     S REE +       S   + +NL  + A +S +S  +   LSSL R    K
Sbjct: 255  ------LTESVREEQFACGRASQSVLKSPANLEFVKAISSHASPLNGYSLSSLKRDTEPK 308

Query: 1077 GVEAS-QGSFHTSVHQQGQMPLAHYGKGSYRKGKHFSKGLEFPRDVGNGFQPQNSQREQA 1253
            G E S Q +  T+ H +G++ LA + +G   K K   +   FPR+       Q+  +   
Sbjct: 309  GPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERINLMQDVGKNML 368

Query: 1254 KSPQINGRRTTNKHDPSEYLKTY 1322
            + P  NG+     HD SE L +Y
Sbjct: 369  QFPYPNGKHANYAHDVSEQLHSY 391


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score =  999 bits (2583), Expect = 0.0
 Identities = 499/702 (71%), Positives = 585/702 (83%)
 Frame = +1

Query: 1222 SNLRTVRESRPSHPKLMEDALLTSMIHLST*RLXXXXXXXXGLLDMDKIYHAKFFNTCKS 1401
            SN  TV+E      K      L S   LS            GLLDMDK+YHAKFF  C+S
Sbjct: 414  SNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRS 473

Query: 1402 QKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKVLQLVKEAGLKADCKLYTTL 1581
            QKA+ EAFRF  LI  PTLSTFNML+SVCA+SQDS GAF+VLQLV+EAGLKADCKLYTTL
Sbjct: 474  QKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTL 533

Query: 1582 ISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKKV 1761
            ISTCAKSGKVD+MFEVFH+MVNA VEPN+HTYGALIDGC RAGQVAKAFGAYGI+RSKKV
Sbjct: 534  ISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKV 593

Query: 1762 KPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDHVTVGALIKTCVQAGEFDRA 1941
            +PDRV+FNALITACGQSGAVDRAFDVL+EMRAE+ PIDPDH+TVGALIK C  AG+ DRA
Sbjct: 594  EPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRA 653

Query: 1942 RKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYEDMTRNGVVPDEMFVSALIDV 2121
            R+VY+MI QYNIKGTPEVYTIAV+S S+ GDW+FA  VY DMTR GVVPDEMF+SALIDV
Sbjct: 654  REVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDV 713

Query: 2122 AGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAENWQKALDVYEDIKAIKLQPT 2301
            AGHAGK+DAA +V+QEAR++G  LG V+YSSLMGACSNA+NWQKAL++Y DIK++KL PT
Sbjct: 714  AGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPT 773

Query: 2302 TSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAILLVASEKKDELETGLMLHS 2481
             ST+NALI+ALC G+QL KA+EVL++MK+AG+CPNT+TY+ILLVASEKKD+++ GLM+ S
Sbjct: 774  VSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILS 833

Query: 2482 QAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSGKPQIDNKWTSLALTVYREM 2661
            QA+KD V P  + C+CL+ MCLRRF++A +LGE +L+FNSG+PQIDNKWTS AL VYRE 
Sbjct: 834  QARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRET 893

Query: 2662 ILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDASRCSNIYSLLDGFGEYDPR 2841
            + AGV+PTME+LS VLGCLQF  D SLR R IENLGV  DASR SN+ SL+DGFGEYD R
Sbjct: 894  VSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSR 953

Query: 2842 SFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLITILKGLKHRLAAGAKLPNV 3021
            +FSLLEEAASLG+V CVSFK+SP+IVD R+ ++   EVYL+T+LKGLKHRLAAGAKLP++
Sbjct: 954  AFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSM 1013

Query: 3022 TILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPYQGHESYGKIRINGLAMKRW 3201
            TILLP E TQ   PKG K I +AGR+ QAV ++LRRLGLPYQG+ES GKIRINGLA +RW
Sbjct: 1014 TILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRW 1073

Query: 3202 FQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSME 3327
            FQPKLA PF G   EL+SS +RL   I+ QQR IRT  LS++
Sbjct: 1074 FQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1115



 Score =  156 bits (394), Expect = 8e-35
 Identities = 123/404 (30%), Positives = 181/404 (44%), Gaps = 20/404 (4%)
 Frame = +3

Query: 171  REFLGSGHRLRPPGLTSRRKCNKFGFQIHR-HRFLCRASLISEPXXXXXXXXXXXXXXXX 347
            REFLG GH LRPPGL S +KC    F+I    RF  +ASL S+P                
Sbjct: 35   REFLGCGHNLRPPGLRSPKKCKNIRFRIQSPSRFYFKASLGSQPVLVVVAVAAVFAFSVV 94

Query: 348  YLKYIRRRDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEFTAEVSVIKRN 527
            +L Y RRR + +E+SG  G +      +S+L RD++ Q +E+ IL  G+   E S  +  
Sbjct: 95   FLSYSRRRKNSREVSGPSGFA------ISQLSRDVMNQFMESAILGFGDLHKETSEKESR 148

Query: 528  LKIEKTRENVLTSEEGDVQNQRTALMHEE-------------ILISEA----SAKERKAI 656
              ++   E    S++ +   Q  ALM EE             +L S A    S +E +  
Sbjct: 149  ATMDIVEEVSHASKDKEAPWQEIALMQEETHVTNTSESSRLDVLSSNAKNCVSVRETEEA 208

Query: 657  GSNLRPLVADEFSVHEPLDFAAEMPEFQPKKCPVEVALGSELPGQEVELVPSASPVSLRY 836
            G ++ P +  E  + +PL FA EMPE Q ++  +E   G +L    V+    A+ V    
Sbjct: 209  GPSILPPLLSESGLLQPLVFATEMPELQLEERQMETEFGYDLSTPVVQTKSIAASVPDII 268

Query: 837  ATIEKNEDYKQSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRSAVSNLRNLNA-T 1013
            A    NE   +      +     +  +F+ + REELYTFYE   S    + N   +    
Sbjct: 269  ALEGVNERKNRGGRPGEESEIISFTGIFRDTIREELYTFYEAKQSVMKPMPNFNGIKTLA 328

Query: 1014 SPSSLQHSTRLSSLLRPNALKGVEASQGSFHTSV-HQQGQMPLAHYGKGSYRKGKHFSKG 1190
            S +SL     +S  +R    K  E S  + H+S  + +G+M L+ Y +GS  K     KG
Sbjct: 329  SNASLLDGNGVSFQMRNATSKEAELSAQNSHSSADYVEGKMSLSCYKEGSSGKRNDLVKG 388

Query: 1191 LEFPRDVGNGFQPQNSQREQAKSPQINGRRTTNKHDPSEYLKTY 1322
              FPRD      P +  R  ++ P  NG     K+  SE    Y
Sbjct: 389  KGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVKEKYHDSEKFSAY 432


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score =  999 bits (2583), Expect = 0.0
 Identities = 499/702 (71%), Positives = 585/702 (83%)
 Frame = +1

Query: 1222 SNLRTVRESRPSHPKLMEDALLTSMIHLST*RLXXXXXXXXGLLDMDKIYHAKFFNTCKS 1401
            SN  TV+E      K      L S   LS            GLLDMDK+YHAKFF  C+S
Sbjct: 849  SNGMTVKEKYHDSEKFSAYNRLLSEGRLSDCIQLLEDMEKMGLLDMDKVYHAKFFKICRS 908

Query: 1402 QKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKVLQLVKEAGLKADCKLYTTL 1581
            QKA+ EAFRF  LI  PTLSTFNML+SVCA+SQDS GAF+VLQLV+EAGLKADCKLYTTL
Sbjct: 909  QKAVTEAFRFAKLIPTPTLSTFNMLMSVCATSQDSAGAFQVLQLVREAGLKADCKLYTTL 968

Query: 1582 ISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKKV 1761
            ISTCAKSGKVD+MFEVFH+MVNA VEPN+HTYGALIDGC RAGQVAKAFGAYGI+RSKKV
Sbjct: 969  ISTCAKSGKVDAMFEVFHEMVNAEVEPNVHTYGALIDGCGRAGQVAKAFGAYGIMRSKKV 1028

Query: 1762 KPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDHVTVGALIKTCVQAGEFDRA 1941
            +PDRV+FNALITACGQSGAVDRAFDVL+EMRAE+ PIDPDH+TVGALIK C  AG+ DRA
Sbjct: 1029 EPDRVVFNALITACGQSGAVDRAFDVLAEMRAETQPIDPDHITVGALIKACTNAGQVDRA 1088

Query: 1942 RKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYEDMTRNGVVPDEMFVSALIDV 2121
            R+VY+MI QYNIKGTPEVYTIAV+S S+ GDW+FA  VY DMTR GVVPDEMF+SALIDV
Sbjct: 1089 REVYKMIDQYNIKGTPEVYTIAVSSHSQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDV 1148

Query: 2122 AGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAENWQKALDVYEDIKAIKLQPT 2301
            AGHAGK+DAA +V+QEAR++G  LG V+YSSLMGACSNA+NWQKAL++Y DIK++KL PT
Sbjct: 1149 AGHAGKLDAAFEVIQEARIQGIPLGIVSYSSLMGACSNAKNWQKALELYVDIKSMKLNPT 1208

Query: 2302 TSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAILLVASEKKDELETGLMLHS 2481
             ST+NALI+ALC G+QL KA+EVL++MK+AG+CPNT+TY+ILLVASEKKD+++ GLM+ S
Sbjct: 1209 VSTMNALITALCEGEQLEKAMEVLSDMKRAGLCPNTITYSILLVASEKKDDIDVGLMILS 1268

Query: 2482 QAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSGKPQIDNKWTSLALTVYREM 2661
            QA+KD V P  + C+CL+ MCLRRF++A +LGE +L+FNSG+PQIDNKWTS AL VYRE 
Sbjct: 1269 QARKDSVAPNLVMCRCLVGMCLRRFEKACALGEPVLSFNSGRPQIDNKWTSSALMVYRET 1328

Query: 2662 ILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDASRCSNIYSLLDGFGEYDPR 2841
            + AGV+PTME+LS VLGCLQF  D SLR R IENLGV  DASR SN+ SL+DGFGEYD R
Sbjct: 1329 VSAGVIPTMELLSQVLGCLQFPRDVSLRNRLIENLGVSADASRRSNLCSLIDGFGEYDSR 1388

Query: 2842 SFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLITILKGLKHRLAAGAKLPNV 3021
            +FSLLEEAASLG+V CVSFK+SP+IVD R+ ++   EVYL+T+LKGLKHRLAAGAKLP++
Sbjct: 1389 AFSLLEEAASLGVVSCVSFKKSPVIVDTRRLQIRIAEVYLLTVLKGLKHRLAAGAKLPSM 1448

Query: 3022 TILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPYQGHESYGKIRINGLAMKRW 3201
            TILLP E TQ   PKG K I +AGR+ QAV ++LRRLGLPYQG+ES GKIRINGLA +RW
Sbjct: 1449 TILLPTETTQVLAPKGEKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRW 1508

Query: 3202 FQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSME 3327
            FQPKLA PF G   EL+SS +RL   I+ QQR IRT  LS++
Sbjct: 1509 FQPKLAGPFSGKVDELSSSQSRLGTGISLQQRKIRTGNLSLD 1550



 Score =  124 bits (310), Expect = 4e-25
 Identities = 105/372 (28%), Positives = 161/372 (43%), Gaps = 19/372 (5%)
 Frame = +3

Query: 264  RFLCRASLISEPXXXXXXXXXXXXXXXXYLKYIRRRDDVKELSGSEGLSRLKGHELSKLG 443
            RF  +ASL S+P                +L Y RRR + +E+SG  G +      +S+L 
Sbjct: 502  RFYFKASLGSQPVLVVVAVAAVFAFSVVFLSYSRRRKNSREVSGPSGFA------ISQLS 555

Query: 444  RDLVKQGIEALILALGEFTAEVSVIKRNLKIEKTRENVLTSEEGDVQNQRTALMHEE--- 614
            RD++ Q +E+ IL  G+   E S  +    ++   E    S++ +   Q  ALM EE   
Sbjct: 556  RDVMNQFMESAILGFGDLHKETSEKESRATMDIVEEVSHASKDKEAPWQEIALMQEETHV 615

Query: 615  ----------ILISEA----SAKERKAIGSNLRPLVADEFSVHEPLDFAAEMPEFQPKKC 752
                      +L S A    S +E +  G ++ P +  E  + +PL FA EMPE Q ++ 
Sbjct: 616  TNTSESSRLDVLSSNAKNCVSVRETEEAGPSILPPLLSESGLLQPLVFATEMPELQLEER 675

Query: 753  PVEVALGSELPGQEVELVPSASPVSLRYATIEKNEDYKQSRHEVGKGVEPPYDCLFKSST 932
             +E   G +L    V+    A+ V    A    NE   +      +     +  +F+ + 
Sbjct: 676  QMETEFGYDLSTPVVQTKSIAASVPDIIALEGVNERKNRGGRPGEESEIISFTGIFRDTI 735

Query: 933  REELYTFYEEDLSGRSAVSNLRNLNA-TSPSSLQHSTRLSSLLRPNALKGVEASQGSFHT 1109
            REELYTFYE   S    + N   +    S +SL     +S  +R    K  E S  + H+
Sbjct: 736  REELYTFYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATSKEAELSAQNSHS 795

Query: 1110 SV-HQQGQMPLAHYGKGSYRKGKHFSKGLEFPRDVGNGFQPQNSQREQAKSPQINGRRTT 1286
            S  + +G+M L+ Y +GS  K     KG  FPRD      P +  R  ++ P  NG    
Sbjct: 796  SADYVEGKMSLSCYKEGSSGKRNDLVKGKGFPRDKNGRLPPLSDHRNLSQFPLSNGMTVK 855

Query: 1287 NKHDPSEYLKTY 1322
             K+  SE    Y
Sbjct: 856  EKYHDSEKFSAY 867


>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 713

 Score =  996 bits (2574), Expect = 0.0
 Identities = 477/661 (72%), Positives = 578/661 (87%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDMDK+YHA+FFN CKSQKAIKEAFRF  L+ NPTLSTFNML+SVCASS+DSEGAF+V
Sbjct: 55   GLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQV 114

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            L+LV+EAGLKADCKLYTTLI+TCAKSGKVD+MFEVFH+MVNAG+EPN+HTYGALIDGCA+
Sbjct: 115  LRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAK 174

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVL+EM AE  P+DPDH
Sbjct: 175  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDH 234

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  AG+ DRAR+VY+MIH+YNIKGTPEVYTIA+N CS+TGDW+FA  VY+D
Sbjct: 235  ITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDD 294

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MT+ GV+PDE+F+SALID AGHAGK++AA ++LQEA+ +G  +G ++YSSLMGACSNA+N
Sbjct: 295  MTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 354

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YE +K+IKL+PT ST+NALI+ALC+GD+L K +EVL++MK  G+CPNT+TY+I
Sbjct: 355  WQKALELYEHMKSIKLKPTVSTMNALITALCDGDRLPKTMEVLSDMKSLGLCPNTITYSI 414

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVA E+KD++E GLML SQAK+DGV+P  +  KC++ MC RR+++A +L E +L+FNSG
Sbjct: 415  LLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSG 474

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQI+NKWTSL L VYRE I+AG +PT+EV+S VLGCLQ  +++ +R R +ENLGV  DA
Sbjct: 475  RPQIENKWTSLVLMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADA 534

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
             + SN+ SL+DGFGEYDPR+FSLLEEAAS GIVPCVSFK SP++VDARK ++HT +VYL+
Sbjct: 535  LKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKESPVVVDARKLEIHTAKVYLL 594

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            TILKGL+HRLAAGAKLPNV ILLPVE TQ  +  G KTI +A R  QA+ ALLRRLGLPY
Sbjct: 595  TILKGLRHRLAAGAKLPNVNILLPVEKTQIMSVGGEKTIDIAERTTQAIAALLRRLGLPY 654

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ SYGKIRINGLA+KRWFQPKLASPF G P EL  SS +L K IT QQRNIRT  LS+
Sbjct: 655  QGNGSYGKIRINGLALKRWFQPKLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSL 712

Query: 3325 E 3327
            E
Sbjct: 713  E 713


>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
            gi|557525497|gb|ESR36803.1| hypothetical protein
            CICLE_v10027915mg [Citrus clementina]
          Length = 713

 Score =  990 bits (2560), Expect = 0.0
 Identities = 476/661 (72%), Positives = 577/661 (87%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDMDK+YHA+FFN CKSQKAIKEAF F  L+ NPTLSTFNML+SVCASS+DSEGAF+V
Sbjct: 55   GLLDMDKVYHARFFNVCKSQKAIKEAFCFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQV 114

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            L+LV+EAGLKADCKLYTTLI+TCAKSGKVD+MFEVFH+MVNAG+EPN+HTYGALIDGCA+
Sbjct: 115  LRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAK 174

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVL+EM AE  P+DPDH
Sbjct: 175  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDH 234

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  AG+ DRAR+VY+MIH+YNIKGTPEVYTIA+N CS+TGDW+FA  VY+D
Sbjct: 235  ITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDD 294

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MT+ GV+PDE+F+SALID AGHAGK++AA ++LQEA+ +G  +G ++YSSLMGACSNA+N
Sbjct: 295  MTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 354

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YE +K+IKL+PT ST+NALI+ALC+GDQL K +EVL++MK  G+CPNT+TY+I
Sbjct: 355  WQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSI 414

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVA E+KD++E GLML SQAK+DGV+P  +  KC++ MC RR+++A +L E +L+FNSG
Sbjct: 415  LLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSG 474

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQI+NKWTSLAL VYRE I+AG +PT+EV+S VLGCLQ  +++ +R R +ENLGV  DA
Sbjct: 475  RPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADA 534

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
             + SN+ SL+DGFGEYDPR+FSLLEEAAS GIVPCVSFK  P++VDARK ++HT +VYL+
Sbjct: 535  LKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAKVYLL 594

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            TILKGL+HRLAAGAKLPNV ILLPVE TQ ++  G KTI +A R  QA+ ALLRRLGLP 
Sbjct: 595  TILKGLRHRLAAGAKLPNVNILLPVEKTQIKSVGGEKTIDIAERTTQAIAALLRRLGLPN 654

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ SYGKIRINGLA+KRWFQPKLASPF G P EL  SS +L K IT QQRNIRT  LS+
Sbjct: 655  QGNGSYGKIRINGLALKRWFQPKLASPFSGKPGEL--SSLQLGKFITHQQRNIRTGNLSL 712

Query: 3325 E 3327
            E
Sbjct: 713  E 713


>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 1110

 Score =  984 bits (2545), Expect = 0.0
 Identities = 478/691 (69%), Positives = 583/691 (84%)
 Frame = +1

Query: 1255 SHPKLMEDALLTSMIHLST*RLXXXXXXXXGLLDMDKIYHAKFFNTCKSQKAIKEAFRFI 1434
            S+ +L+ D  L+  + L             GLLDM+K+YHAKFF  C  QKA+KEAF F 
Sbjct: 426  SYNRLLRDGRLSDCVDL------LEDMEQRGLLDMNKVYHAKFFKICNRQKAVKEAFCFT 479

Query: 1435 NLIGNPTLSTFNMLLSVCASSQDSEGAFKVLQLVKEAGLKADCKLYTTLISTCAKSGKVD 1614
             LI NPTLSTFNML+SVCASSQDS+GAF+VL++V+EAG KADCKLYTTLISTCAKSGKVD
Sbjct: 480  KLIPNPTLSTFNMLMSVCASSQDSDGAFEVLRIVQEAGFKADCKLYTTLISTCAKSGKVD 539

Query: 1615 SMFEVFHDMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKKVKPDRVIFNALI 1794
            +MFEVFH+MVN+GVEPN++TYGALIDGCARAGQVAKAFGAYGI+RSK VKPDRV+FNALI
Sbjct: 540  TMFEVFHEMVNSGVEPNVNTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 599

Query: 1795 TACGQSGAVDRAFDVLSEMRAESTPIDPDHVTVGALIKTCVQAGEFDRARKVYEMIHQYN 1974
            TACGQSGAVDRAFDVL+EM AE+ PIDPDHVTVGALIK C  A + DRAR+VY+MIH+++
Sbjct: 600  TACGQSGAVDRAFDVLAEMMAETQPIDPDHVTVGALIKACSNADQVDRAREVYKMIHEFS 659

Query: 1975 IKGTPEVYTIAVNSCSETGDWDFALRVYEDMTRNGVVPDEMFVSALIDVAGHAGKIDAAL 2154
            IKGTPEVYTIAVN CS+TGDW+FA  VY DM   GV PDE+F+SALIDVAGHAGK+DAA 
Sbjct: 660  IKGTPEVYTIAVNCCSQTGDWEFACSVYSDMKGKGVAPDEVFISALIDVAGHAGKLDAAF 719

Query: 2155 KVLQEARVRGTKLGNVAYSSLMGACSNAENWQKALDVYEDIKAIKLQPTTSTLNALISAL 2334
            ++L+EA+ +G  +G V+YSSLMGACSNA NWQKAL++YE+IKA+KL  T ST+NALI++L
Sbjct: 720  EILEEAKNQGINVGIVSYSSLMGACSNARNWQKALELYENIKAVKLNLTVSTVNALITSL 779

Query: 2335 CNGDQLHKAVEVLAEMKKAGVCPNTVTYAILLVASEKKDELETGLMLHSQAKKDGVVPYD 2514
            C  DQL KA+E+L+EM++ G+CPNTVTY+ILLVASE+KD+LE GLML SQA+KDGV P  
Sbjct: 780  CEADQLPKAMEILSEMEELGLCPNTVTYSILLVASERKDDLEVGLMLLSQARKDGVAPNL 839

Query: 2515 ITCKCLLSMCLRRFKEAHSLGERILTFNSGKPQIDNKWTSLALTVYREMILAGVVPTMEV 2694
            I  +C++ MCLRRF++A  +GE +L+FNSG+P I+NKWTS+AL VYRE I+AG  PTM+V
Sbjct: 840  IMARCIIGMCLRRFEKACKVGEPVLSFNSGQPHIENKWTSVALAVYRETIVAGTAPTMDV 899

Query: 2695 LSIVLGCLQFSHDSSLRARFIENLGVMTDASRCSNIYSLLDGFGEYDPRSFSLLEEAASL 2874
            +S +LGCLQ   D SL++R +ENL V  DA+RCS++ SL+DGFGEYDPR+FSLLEEAAS 
Sbjct: 900  ISQILGCLQLPRDDSLKSRLVENLDVSADATRCSSLSSLIDGFGEYDPRAFSLLEEAASF 959

Query: 2875 GIVPCVSFKRSPIIVDARKFKVHTVEVYLITILKGLKHRLAAGAKLPNVTILLPVENTQT 3054
            GIVPCVSFK SPI+VDAR+ +++  EVYL+TILKGLKHR AAGAKLP++++LLP+E TQ 
Sbjct: 960  GIVPCVSFKESPIVVDARELQINMAEVYLLTILKGLKHRRAAGAKLPSISVLLPLEKTQV 1019

Query: 3055 QTPKGLKTIKVAGRVGQAVGALLRRLGLPYQGHESYGKIRINGLAMKRWFQPKLASPFIG 3234
             TP+  K+I +AGR+GQA+ ALLRR+GLPYQG+ES+GKIRINGLA+KRWFQPKLASPF G
Sbjct: 1020 LTPEREKSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLASPFTG 1079

Query: 3235 NPAELNSSSTRLAKAITDQQRNIRTSFLSME 3327
             P E N+S  RL K I+ QQRNIRT  LS++
Sbjct: 1080 KPGEWNASQMRLGKGISHQQRNIRTGNLSLD 1110



 Score =  125 bits (315), Expect = 1e-25
 Identities = 124/409 (30%), Positives = 190/409 (46%), Gaps = 25/409 (6%)
 Frame = +3

Query: 171  REFLGSGHRLRPPG-LTSRRKCNK-FGF-QIHRHRFLCRASLISE-PXXXXXXXXXXXXX 338
            R+FLG  H LRPPG  +S RK NK  GF ++H  RF+ RAS+ S                
Sbjct: 34   RQFLGFNHTLRPPGGASSLRKKNKTLGFLRLHSPRFIVRASIDSNLVLVVIGVTALSALS 93

Query: 339  XXXYLKYIRRRDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEFTAEVSVI 518
               Y ++ R+    K +SGS   +  +     +LG+D   Q  E+ +L +G+   E    
Sbjct: 94   LACYNRFFRKIGSSKTVSGSSHSALPQ----QRLGKDGAVQTAESQVLDIGDLKKENFAK 149

Query: 519  KRNLKIEKTRENVLTSE--EGDVQNQRTALMHEEILI---SEASAKERKAIGSN------ 665
             ++   E+ +E    SE  E  +Q Q T + +++ L+   S++S  +  A+ +N      
Sbjct: 150  GKDDLKEEIKEATYASESKEALLQFQETTVANDDSLLHKTSDSSGADCLAVTANGFDVSE 209

Query: 666  --------LRPLVADEFSVHEPLDFAAEMPEFQPKKCPVEVALGSELPGQEVELVPSASP 821
                    L P V  E    EPL FAAEM E   ++        ++LP   VE   SAS 
Sbjct: 210  ESGATDLPLPPTVLLESGAVEPLMFAAEMSELHLEEVERVNEFEADLPRLAVEPESSASS 269

Query: 822  VSLRYATIEKNEDYKQSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRSAVSNLRN 1001
            V ++ A +   E  + +RH         YD +FK S REEL+TFYE D     + +NL  
Sbjct: 270  VLVKDAHVLVGEG-EVTRH---------YD-IFKESVREELHTFYEADQLVAKSSTNLNG 318

Query: 1002 LN-ATSPSSLQHSTRLSSLLRPNALKGVE-ASQGSFHTSVHQQGQMPLAHYGKGSYRKGK 1175
            L  A+S     +S   SSL++ + LK  + +S+    T+   +G++  A   + S  K +
Sbjct: 319  LKPASSRVFSPNSNSFSSLMQNSELKRAQLSSKNCLQTADMAEGKVAQACSNRVSSHKRQ 378

Query: 1176 HFSKGLEFPRDVGNGFQPQNSQREQAKSPQINGRRTTNKHDPSEYLKTY 1322
             F +G E PRD G     Q    +  K P  NG    NKH P ++ ++Y
Sbjct: 379  DFGRGREIPRDKGKRHSIQEKNTKLPKFPFPNGMLADNKHRPEDHFRSY 427


>ref|XP_007199677.1| hypothetical protein PRUPE_ppa000631mg [Prunus persica]
            gi|462395077|gb|EMJ00876.1| hypothetical protein
            PRUPE_ppa000631mg [Prunus persica]
          Length = 1060

 Score =  960 bits (2482), Expect(2) = 0.0
 Identities = 471/661 (71%), Positives = 568/661 (85%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDM+K+YHA+FF  CKSQKA+ +AFRFI LI NPTLST+NML++VCASSQDSE AF V
Sbjct: 404  GLLDMNKVYHARFFEICKSQKAVDKAFRFIKLIPNPTLSTYNMLMTVCASSQDSEEAFHV 463

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            L+LV+EAG+K DCKLYTTLISTC KSGKV +MF+VFH+MVNAGVEPN+HTYGALIDGC R
Sbjct: 464  LRLVREAGMKPDCKLYTTLISTCGKSGKVYTMFDVFHEMVNAGVEPNVHTYGALIDGCGR 523

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AG+VAKAFGAYGI+RSKKVKPDRV+FNALITACGQSGAVDRAFDVL EM AE+ PI+PDH
Sbjct: 524  AGEVAKAFGAYGIMRSKKVKPDRVVFNALITACGQSGAVDRAFDVLGEMMAETQPIEPDH 583

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
             TVGALIK C  AG+ DRAR+VY+M+H+Y IKG+ EVYTIAVN CS+TGDW+FA  VY D
Sbjct: 584  TTVGALIKACANAGQVDRAREVYKMVHKYKIKGSSEVYTIAVNCCSQTGDWEFACNVYSD 643

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MTR GVVPDEMF+SALIDVAGH GK+DAA ++LQEAR +G ++G V+YSSLMGACSNA+N
Sbjct: 644  MTRKGVVPDEMFLSALIDVAGHVGKLDAAFEILQEARNQGIQVGTVSYSSLMGACSNAKN 703

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            W KAL++YE +K+ K++ T ST+NALI+ALC+GDQL KA+EVL+EMK  G+ PN++TY+I
Sbjct: 704  WHKALELYEYLKSTKIEKTVSTVNALITALCDGDQLQKAMEVLSEMKGFGLHPNSITYSI 763

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVASEKKD+LE G ML SQA+KDGV P  + C+C++ MCLRR ++A SLGE +L  +  
Sbjct: 764  LLVASEKKDDLEAGHMLLSQAEKDGVAPNLVMCRCIIGMCLRRSEKACSLGEPVL--SRD 821

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQ+D+KW SLAL VYR+ I+AG++PT+EV+S VLGCLQ  +D+S + R IENLGV  + 
Sbjct: 822  RPQVDSKWASLALMVYRKTIVAGIMPTVEVISQVLGCLQLPYDASFKNRLIENLGVTAET 881

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            SR SN+ SL+DGFGEYDPR+FSLLEEAASLGIVPCVSFK SP++VDARK ++HT EV+++
Sbjct: 882  SRPSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPCVSFKASPVVVDARKLQLHTAEVFIL 941

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LKGLKHRLAAGAKLPN+TILLPVE TQ  +PKG KTI +AGRVGQ+V ALLRRLG+PY
Sbjct: 942  TVLKGLKHRLAAGAKLPNMTILLPVEKTQIMSPKG-KTINIAGRVGQSVAALLRRLGIPY 1000

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ES GKI+I+GLAMKRW QPKLAS F G P E  SS  +L K IT QQRNIRT  LS+
Sbjct: 1001 QGNESRGKIKISGLAMKRWLQPKLAS-FTGKPGEFGSSQLQLGKGITHQQRNIRTGNLSL 1059

Query: 3325 E 3327
            +
Sbjct: 1060 D 1060



 Score = 47.4 bits (111), Expect(2) = 0.0
 Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 21/270 (7%)
 Frame = +3

Query: 576  DVQNQRTALMHEEILISEASAKERKAIGSNLRPLVADEFSVHEPLDFAAEMPEFQPKKCP 755
            D  N +   +   +L    SA+E      +L PLV +  +V +PL F  E+ + Q  +  
Sbjct: 141  DALNGKIEEIEAPVLQFHNSAQE------SLAPLVFESTAVLQPLRFPTELTQLQQPERS 194

Query: 756  VEVALG------SELPGQEVELVPSASPVSLRYATIEKNEDY----------KQSRHEVG 887
             +V         S+L G+  E      P+S  ++ +  + ++           +   EVG
Sbjct: 195  EDVDYDPISEEFSKLMGERSE-DGGRDPISDEFSKLMSDSNFGVASPSVPVDDEESVEVG 253

Query: 888  K----GVEPPYDCLFKSSTREELYTFYEEDLSGRSAVSNLRNLNATSPSSLQHSTRLSSL 1055
            +    G    +  L + S REEL+ FYE   S +S   ++ +LN   P         SS 
Sbjct: 254  ESDEVGEATSFHVLNRESVREELHMFYE---SNKSETKSVASLNGKKP---------SSF 301

Query: 1056 LRPNALKGVE-ASQGSFHTSVHQQGQMPLAHYGKGSYRKGKHFSKGLEFPRDVGNGFQPQ 1232
            LR   + G +   Q S HT+   +G            R  K   KG  +  D      P+
Sbjct: 302  LRNITVTGADLIPQASHHTTESIEGHT----------RSRKDLGKGSGYSSDKEVRHLPK 351

Query: 1233 NSQREQAKSPQINGRRTTNKHDPSEYLKTY 1322
             +     + P  +G  T ++   SE L  Y
Sbjct: 352  KNSGTMTQFPHPHGIHTNDRDLLSEQLSAY 381


>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
          Length = 1125

 Score =  976 bits (2524), Expect = 0.0
 Identities = 479/695 (68%), Positives = 574/695 (82%)
 Frame = +1

Query: 1243 ESRPSHPKLMEDALLTSMIHLST*RLXXXXXXXXGLLDMDKIYHAKFFNTCKSQKAIKEA 1422
            E   ++ +L++D  L+  + L             GLLDM+K+YHAKFF  CK QKA+ EA
Sbjct: 437  EQISTYNRLVKDGRLSDAVEL------LEDMERRGLLDMNKVYHAKFFKICKFQKAVNEA 490

Query: 1423 FRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKVLQLVKEAGLKADCKLYTTLISTCAKS 1602
            FR++NLI  PTLST+NML+SVC SSQD EGAFKV+QLV+EAGLKADCKLYTTLISTCAKS
Sbjct: 491  FRYVNLIPYPTLSTYNMLMSVCTSSQDPEGAFKVMQLVQEAGLKADCKLYTTLISTCAKS 550

Query: 1603 GKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKKVKPDRVIF 1782
            GKVDSMFEVFH MVN GVEPN+HTYG+LIDGCARAGQVAKAFGAYGI+RSK VKPDRV+F
Sbjct: 551  GKVDSMFEVFHKMVNDGVEPNVHTYGSLIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVF 610

Query: 1783 NALITACGQSGAVDRAFDVLSEMRAESTPIDPDHVTVGALIKTCVQAGEFDRARKVYEMI 1962
            NALITACGQSGAVDRAFDVL+EM AE   IDPDH+TVGAL+K C  +G+ DRAR+VY+M+
Sbjct: 611  NALITACGQSGAVDRAFDVLAEMTAEPELIDPDHITVGALMKACANSGQVDRAREVYKMV 670

Query: 1963 HQYNIKGTPEVYTIAVNSCSETGDWDFALRVYEDMTRNGVVPDEMFVSALIDVAGHAGKI 2142
            HQYN+KGTPEVYTIAVN+ S  GDW+FA  VY+DMTR GV+PDEMF+SALID AGHAGK+
Sbjct: 671  HQYNLKGTPEVYTIAVNTSSHMGDWEFARNVYDDMTRKGVLPDEMFLSALIDAAGHAGKL 730

Query: 2143 DAALKVLQEARVRGTKLGNVAYSSLMGACSNAENWQKALDVYEDIKAIKLQPTTSTLNAL 2322
            DAA ++L EA+ RG K G V+YSSLMGACSNA+NWQKAL++YED+K+ K + T ST+NAL
Sbjct: 731  DAAFEILSEAKNRGVKFGTVSYSSLMGACSNAKNWQKALELYEDLKSTKSEQTVSTVNAL 790

Query: 2323 ISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAILLVASEKKDELETGLMLHSQAKKDGV 2502
            I+ALC+GDQL KA+EVL+EMK  G+ PN++TY+ILLVASEKKD+LE GL+L SQAKKDG+
Sbjct: 791  ITALCDGDQLQKAMEVLSEMKALGLSPNSITYSILLVASEKKDDLEVGLVLFSQAKKDGI 850

Query: 2503 VPYDITCKCLLSMCLRRFKEAHSLGERILTFNSGKPQIDNKWTSLALTVYREMILAGVVP 2682
             P  +  +C+L  CLRR++ A +LGE +L+F+ G+PQ+ NKWTS AL VYR+ I AGV P
Sbjct: 851  SPNLLMSRCILGTCLRRYENASTLGEPVLSFDPGRPQVVNKWTSSALMVYRDTIAAGVTP 910

Query: 2683 TMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDASRCSNIYSLLDGFGEYDPRSFSLLEE 2862
            T++VLS VLGCLQ  HD SL+ R IENL V  D SR SN+ SL+DGFGEYDPR+FSLLEE
Sbjct: 911  TIDVLSQVLGCLQLPHDPSLKNRLIENLAVSVDTSRPSNLSSLIDGFGEYDPRAFSLLEE 970

Query: 2863 AASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLITILKGLKHRLAAGAKLPNVTILLPVE 3042
            AAS GI+ CVSFK+SP+IVD R+ ++HT EVYL+T+LKGLK+RLAAGAKLP +TILLPVE
Sbjct: 971  AASFGIISCVSFKQSPVIVDTRELQIHTAEVYLLTVLKGLKNRLAAGAKLPTITILLPVE 1030

Query: 3043 NTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPYQGHESYGKIRINGLAMKRWFQPKLAS 3222
              Q  +PK  KTI +AGR+G+AV ALLRRLGLPYQGHES+GKIRI GL +KRWF+PKLAS
Sbjct: 1031 KAQLTSPKEEKTINLAGRIGRAVAALLRRLGLPYQGHESHGKIRIYGLTLKRWFKPKLAS 1090

Query: 3223 PFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSME 3327
            PF G P E+N S  RL K I  QQRNIRT  LS++
Sbjct: 1091 PFSGRPEEINLSQFRLGKEIAHQQRNIRTGNLSLD 1125



 Score =  124 bits (312), Expect = 2e-25
 Identities = 119/454 (26%), Positives = 191/454 (42%), Gaps = 33/454 (7%)
 Frame = +3

Query: 60   MDVTLSAKSQTXXXXXXXXXXXXXXXXXXXXXXXXXPREFLGSGHRLRPPG-LTSRRKCN 236
            MDV  SAK Q                           REFLG GH LRPPG L SR +  
Sbjct: 1    MDVRFSAKPQILTLISCTPLSSSSSASPSRSSLRSIRREFLGCGHNLRPPGSLRSRGRQR 60

Query: 237  KFGFQIHRHRFLCRASLISEPXXXXXXXXXXXXXXXXYLKYIRRRDDVKELSGSEGLSRL 416
            K        RFL RASL S P                Y  + + + + +E+ G    +  
Sbjct: 61   KPWSHSRSSRFLFRASLGSHPVLVVVAVVTVSAASVVYWNFFKSKKNAREVPGPANFA-- 118

Query: 417  KGHELSKLGRDLVKQGIEALILALGEFTAEVSVIKRNLKIEKTRENVLTSEE--GDVQNQ 590
                L ++G +++   I++ +L  G+   E+ V  + L  ++ REN   S E    +Q  
Sbjct: 119  ----LPQMGGNVMNHVIQSQMLDFGD-VREMEV--QQLLKDENRENSHASVEKQAPLQFH 171

Query: 591  RTALMHEEILISEASAK-----------------ERKAIGSNLRPLVADEFSVHEPLDFA 719
               +M++E L++ A                    E   +  +L PL++ E ++ EPL+  
Sbjct: 172  NATVMNQETLVTSALQSSGSGVLVSGASNSTFLNESSVLDQSLSPLLS-ESAILEPLNLP 230

Query: 720  AEMPEFQPKKCPVEVALGSELPGQEVELVPSASPVSLR-----------YATIEKNEDYK 866
              +  FQ  K   E+     L G     V     V L+           ++  E +ED  
Sbjct: 231  ESLNGFQLDKLREEIESSESLFGSAS--VQDNGSVHLQEEIVSKFKVNGHSVAELHEDET 288

Query: 867  QSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRSAVSNLRNLNATSPS-SLQHSTR 1043
              R    +G    Y+ L   S R+EL+ FY+E+ S    +  +   N+ SP+ S  +S  
Sbjct: 289  DKRRLGEEGEMTSYNFLLGESVRKELHMFYDENKSDEKGIGKINGHNSLSPNASAPNSKT 348

Query: 1044 LSSLLRPNALKGVEASQGSFHTSV-HQQGQMPLAHYGKGSYRKGKHFSKGLEFPRDVGNG 1220
            +S+ LR   +KG EA+         + + ++P + + +G+ R GK+  +G  + RD+  G
Sbjct: 349  VSASLRDTIVKGGEATALFPPLKADNHESKIPFSSHKEGTLRSGKNSGQGRGYSRDLIKG 408

Query: 1221 FQPQNSQREQAKSPQINGRRTTNKHDPSEYLKTY 1322
               QN+ +  AK  ++NG     KH PSE + TY
Sbjct: 409  NLAQNNHKAPAKLTRLNGLDVEQKHHPSEQISTY 442


>ref|XP_006592076.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like [Glycine max]
          Length = 1127

 Score =  914 bits (2362), Expect(2) = 0.0
 Identities = 446/670 (66%), Positives = 552/670 (82%), Gaps = 9/670 (1%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDM K+YHAKFFN CK +KA+KEAF FI LI NP LSTFNML+SVCASSQDSEGAF+V
Sbjct: 458  GLLDMSKVYHAKFFNICKKRKAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQV 517

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            LQL+K+A L+ DCKLYTTLI TCAKSGKVD MFEVFH MVN+GVEPN+HTYGALI GCAR
Sbjct: 518  LQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCAR 577

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALI AC QSGAVDRAFDVL+EM AE+ PIDPDH
Sbjct: 578  AGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDPDH 637

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            VT+GAL+K C +AG+ +RA++VY+M+ +YNIKG PEVYTIA+NSCS+TGDW++A  VY D
Sbjct: 638  VTIGALLKACTKAGQVERAQEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEYARTVYND 697

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MT+ G++PDE+F+SALIDVAGHA K+DAA  VLQEA   G ++G ++YSSLMGACSNA N
Sbjct: 698  MTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEAHKGGIQIGIMSYSSLMGACSNARN 757

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YE +K++KL  T ST+NAL++ALC+GDQ  KA+EVL EMK  G+ PN++T++I
Sbjct: 758  WQKALELYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLSPNSITFSI 817

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            L+VASEKKD++E   M+ S AKKDGV P  I C+C++ MC RR+++A  +GE +L+F+SG
Sbjct: 818  LIVASEKKDDMEAAQMILSLAKKDGVAPNLIMCRCIIGMCQRRYEKACFVGEPVLSFDSG 877

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +P +DNKWTSLAL VYRE I AG  PT E+L  +LGCLQ  +D+S++ R +ENLGV  + 
Sbjct: 878  RPLVDNKWTSLALMVYRETIEAGGKPTSEILPQILGCLQLPYDTSVKNRLVENLGVRAET 937

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            SR SN+ SL+DGFGEYDPR+FS+LEE+AS G+VP VSFK SPI++DA++    T EVY+I
Sbjct: 938  SRSSNLCSLMDGFGEYDPRAFSILEESASHGVVPSVSFKVSPIVIDAKELHASTAEVYII 997

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LKGLK+RLAAGA+LPN+ ILLPVE T+  +PKG K I + GR GQAVGALLRRL +P+
Sbjct: 998  TVLKGLKYRLAAGARLPNIIILLPVEETEVVSPKGKKIINLGGRAGQAVGALLRRLQIPH 1057

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASP---------FIGNPAELNSSSTRLAKAITDQQR 3297
            QG ES GK+RI GLA+K+WFQPKLASP         F G P + NSS +RL K I++QQR
Sbjct: 1058 QGSESNGKLRIGGLALKKWFQPKLASPFSVNMGSPTFSGKPGDWNSSLSRLGKNISNQQR 1117

Query: 3298 NIRTSFLSME 3327
            NIR   LS++
Sbjct: 1118 NIRIGNLSLD 1127



 Score = 80.1 bits (196), Expect(2) = 0.0
 Identities = 110/422 (26%), Positives = 178/422 (42%), Gaps = 40/422 (9%)
 Frame = +3

Query: 177  FLGSGHRLRPPGLT-------SRRKCNKFG-FQIHRHRFLCRASLISEPXXXXXXXXXXX 332
            FLGS H LRPP  T       ++R  + FG  + H  RF+ +AS  S             
Sbjct: 29   FLGSTHTLRPPPPTPPSLRSRNKRSSSNFGLLRFHSPRFVFKASFHSHSVIVVFIVVTLS 88

Query: 333  XXXXXYLKYIRRRDDVKELSGSEGLSRLKGH---ELSKLGRDLVKQGIEALILALGEFTA 503
                 +    +++        ++ L++ +GH    LS  G ++  + I+  IL   EF  
Sbjct: 89   AVSWLHFTLNKKK--------NKTLNQRRGHAKFALSSQGTNVGNRVIDREILGFTEFQR 140

Query: 504  EVSVIKRNLKIEKTRENVLTSEEGDVQNQ--RTALMHEEILISEASAKERKAIGS----N 665
            + ++ +     +   E+    EE ++     +++++ E +  +EAS      + S    N
Sbjct: 141  DNTLTEIGKLKDHHGEDYRVFEENEIHIPFLKSSVVQEVVAATEASESSSSVLDSGVNNN 200

Query: 666  LRPLVADEF--------SVHEPLDFAAEMPEFQPKKCPVEVALGSELPGQEVELVPSASP 821
                V DE         S  +PL+FA EM   Q ++   +V    ELP   VE   SAS 
Sbjct: 201  NGSKVLDEAFLSVAFSPSSLQPLEFAEEM-AIQVEESQDKVDSDDELPLNMVEPEHSASS 259

Query: 822  VSLRYATIEKNEDYKQSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRSAVSNLRN 1001
            VS+  A +   + + + + E+G   +   D LF    RE LY FYE +     +++ L +
Sbjct: 260  VSVNNA-LTTVDGHTKEKIELGAVND---DVLFGEPVREGLYMFYEVNKPATGSMTPLSS 315

Query: 1002 LNATSP-SSLQHSTRLSSLLRPNALKG-----------VEASQGSFHTSVHQQGQMPLAH 1145
            L + SP +S ++   L S++   ALKG            E  +G+   S H+ G  P  H
Sbjct: 316  LKSLSPRASFRNKKGLPSVMGNGALKGSGLSTDIPLQSAEHVKGAVKISSHKGGYPP-QH 374

Query: 1146 YGKGSYRKGKHFSKGLEFPRDVGNGFQPQNSQREQAKSPQINGR---RTTNKHDPSEYLK 1316
              K + RKG    +  E     GN   P N+   +    Q NG+      +K D SE L 
Sbjct: 375  VSK-NLRKGVISLRERESMDHNGNKVFPLNAHATKVHVDQTNGQFRVHDGHKMDSSELLS 433

Query: 1317 TY 1322
             Y
Sbjct: 434  KY 435


>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1028

 Score =  959 bits (2479), Expect = 0.0
 Identities = 468/703 (66%), Positives = 584/703 (83%), Gaps = 1/703 (0%)
 Frame = +1

Query: 1222 SNLRTVRESRPSHPKLMEDALLTSMIHLST*RLXXXXXXXXGLLDMDKIYHAKFFNTCKS 1401
            S+   + E   ++ +L++D  L+  + L              LLDM+K+YH +FF TCK 
Sbjct: 332  SDTHYISEQLSAYHRLLKDGRLSDSLRL------LEDLEKKDLLDMNKVYHGRFFETCKK 385

Query: 1402 QKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKVLQLVKEAGLKADCKLYTTL 1581
            +KA+ +AFRFI LI NPT+ST+NML+SVCASSQDSEGAF VL LV+EAGL+ DCKLYTTL
Sbjct: 386  KKAVDQAFRFIKLIPNPTMSTYNMLMSVCASSQDSEGAFNVLGLVREAGLRVDCKLYTTL 445

Query: 1582 ISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCARAGQVAKAFGAYGILRSKKV 1761
            ISTCAKSGKV +MF+VFH+MV+AGVEPN+HTYGALIDGC RAG+VAKAFGAYGI+RSKKV
Sbjct: 446  ISTCAKSGKVYTMFDVFHEMVSAGVEPNVHTYGALIDGCGRAGEVAKAFGAYGIMRSKKV 505

Query: 1762 KPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDHVTVGALIKTCVQAGEFDRA 1941
            KPDRV+FNALITACGQSGAVDRAFDVL EM+AE+ PI+PDH T+GALIK C  AG+ +RA
Sbjct: 506  KPDRVVFNALITACGQSGAVDRAFDVLEEMKAETQPIEPDHTTIGALIKACANAGQVERA 565

Query: 1942 RKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYEDMTRNGVVPDEMFVSALIDV 2121
            R+VY+MIH+Y IKGT EVYTIAVN CS+T DW+FA  VY+ M +NGV PDE+F+SALIDV
Sbjct: 566  REVYKMIHKYKIKGTSEVYTIAVNCCSQTADWEFACTVYDYMKKNGVTPDEVFLSALIDV 625

Query: 2122 AGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAENWQKALDVYEDIKAIKLQPT 2301
            AGHAGK+DAA +++Q+A  RG ++G V+YSSLMGACSNA+NWQKAL++YED+K+ K++ T
Sbjct: 626  AGHAGKLDAAFEIIQDASNRGIQVGTVSYSSLMGACSNAKNWQKALELYEDLKSAKIEQT 685

Query: 2302 TSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAILLVASEKKDELETGLMLHS 2481
             ST+NALI+ALC+GDQL KA+EVL+EMK  G+ PN++TY+IL+VASEKKD+LE GLML S
Sbjct: 686  VSTINALITALCDGDQLQKAMEVLSEMKSIGLRPNSITYSILVVASEKKDDLEAGLMLLS 745

Query: 2482 QAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSGKPQIDNKWTSLALTVYREM 2661
            QA+ D VVP  + C+C++ MCLRR ++A +LGE +L  +SG+PQ+D+KW+S+AL VYR+ 
Sbjct: 746  QAEMDKVVPNLVMCRCIIGMCLRRSEKACTLGEPVLPLDSGRPQVDSKWSSVALMVYRKT 805

Query: 2662 ILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDASRCSNIYSLLDGFGEYDPR 2841
            I+AG  PT+E++S VLGCLQ  +D++ + R IENLGV  D SR S + SL+DGFGEYDPR
Sbjct: 806  IVAGTTPTIEIISQVLGCLQLPYDAASKNRVIENLGVTADMSRASKLCSLIDGFGEYDPR 865

Query: 2842 SFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLITILKGLKHRLAAGAKLPNV 3021
            +FSLLEEAASLGIVPCVSFK SPI+VDA+K ++HT EVY++T+L+GLKHRLAAGAKLPN+
Sbjct: 866  AFSLLEEAASLGIVPCVSFKASPIVVDAKKLQLHTAEVYILTVLRGLKHRLAAGAKLPNM 925

Query: 3022 TILLPVENTQTQTPKG-LKTIKVAGRVGQAVGALLRRLGLPYQGHESYGKIRINGLAMKR 3198
            TILLPVE TQ  +PKG LKTI ++GRVGQ+V +LLRRLG+ YQG+ES GKIRI+GL +KR
Sbjct: 926  TILLPVEKTQILSPKGKLKTINLSGRVGQSVASLLRRLGIDYQGNESRGKIRISGLTLKR 985

Query: 3199 WFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSME 3327
            WFQPKLASPF G  AEL SS  RL K I  QQRNIRT  LS++
Sbjct: 986  WFQPKLASPFTGKLAELGSSQLRLGKGIMHQQRNIRTGNLSLD 1028


>ref|XP_006840107.1| hypothetical protein AMTR_s00224p00011500 [Amborella trichopoda]
            gi|548841763|gb|ERN01782.1| hypothetical protein
            AMTR_s00224p00011500 [Amborella trichopoda]
          Length = 1185

 Score =  947 bits (2447), Expect = 0.0
 Identities = 462/659 (70%), Positives = 548/659 (83%)
 Frame = +1

Query: 1348 LLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKVL 1527
            LLDMDKIYH +F N CK+QKA+ EAFRF+ L+  P+LSTFNMLLSV ASS DSEGAF+VL
Sbjct: 502  LLDMDKIYHTRFLNMCKTQKAVDEAFRFVQLVRKPSLSTFNMLLSVYASSHDSEGAFRVL 561

Query: 1528 QLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCARA 1707
             LVKEAGLKADCKLYTTLISTCAKSGKVD MFEVFH+MVN GVEPN+HTYGALIDGCARA
Sbjct: 562  ALVKEAGLKADCKLYTTLISTCAKSGKVDGMFEVFHEMVNTGVEPNVHTYGALIDGCARA 621

Query: 1708 GQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDHV 1887
            GQ+AKAFGAYGI+RSK VKPDRV+FNALI ACG+SGAVDRAFDVLSEMRAE  PIDPDHV
Sbjct: 622  GQIAKAFGAYGIMRSKNVKPDRVVFNALINACGRSGAVDRAFDVLSEMRAEPQPIDPDHV 681

Query: 1888 TVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYEDM 2067
            TVGAL++TC QAG+ DRA +VY+M+H YNIKG P+VYTIAVNSCSE GD DFALRVY+DM
Sbjct: 682  TVGALMRTCSQAGQVDRALEVYKMVHGYNIKGCPDVYTIAVNSCSEKGDLDFALRVYDDM 741

Query: 2068 TRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAENW 2247
              NGV PDE+F SALIDVAGHAGK+D A  ++Q+A+  G ++GN+ YSS+MGAC +A++W
Sbjct: 742  KENGVKPDEVFFSALIDVAGHAGKLDVAFSIIQDAKNHGIQIGNILYSSVMGACRHAKSW 801

Query: 2248 QKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAIL 2427
            Q+AL++YEDIK+IKL PT STLNALI++LC GDQLHKAVEVL E ++AG+CPN++TY+IL
Sbjct: 802  QRALELYEDIKSIKLLPTVSTLNALITSLCEGDQLHKAVEVLEETREAGMCPNSITYSIL 861

Query: 2428 LVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSGK 2607
             V  EKKDE E  L L S +KKDG+    I C C   +CLRR+++A +LGE IL F+SG 
Sbjct: 862  FVECEKKDETECALKLLSYSKKDGIGVNLIMCGCFTGLCLRRYEKASALGEPILAFSSGN 921

Query: 2608 PQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDAS 2787
             QIDN+WTS AL VYRE + AG++PTMEV S VLGCLQ  +D  LR   ++N G+  D  
Sbjct: 922  AQIDNQWTSWALMVYRETVSAGIIPTMEVFSQVLGCLQIPYDPVLRNSLLDNQGISIDVL 981

Query: 2788 RCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLIT 2967
            RC N+ SL+DGFGEYDPR+FSLLEEAASLG+VP VSFK SPIIVD R  ++HT EVY +T
Sbjct: 982  RCPNVCSLVDGFGEYDPRAFSLLEEAASLGVVPGVSFKSSPIIVDTRMLRIHTAEVYFLT 1041

Query: 2968 ILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPYQ 3147
            +LKGLKHRLAAGAKLPN+TI+LP+E T   +  G KT+ ++GR+GQA+GALLRRLGLPYQ
Sbjct: 1042 VLKGLKHRLAAGAKLPNMTIILPIEKTTVASGNGDKTVHLSGRIGQALGALLRRLGLPYQ 1101

Query: 3148 GHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            G+ESYGKIRI+GLA+KRWFQPKLA  F     E++S  TRLAK ITDQQ +IRT  LS+
Sbjct: 1102 GNESYGKIRISGLALKRWFQPKLALRFSRKQPEMSSPPTRLAKGITDQQHSIRTKNLSL 1160


>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cicer arietinum]
          Length = 1113

 Score =  906 bits (2341), Expect(2) = 0.0
 Identities = 440/661 (66%), Positives = 546/661 (82%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDM K YHAKFFN CK QKA+KEAF +I LI NPTLSTFNML+SVC SSQDSEGAF+V
Sbjct: 453  GLLDMTKAYHAKFFNICKKQKAVKEAFDYIRLIPNPTLSTFNMLMSVCTSSQDSEGAFQV 512

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            +QL+K+A    DCKLYTTLISTCAK+GKVD MFEVFH MVN+GVEPN+HTYGALIDGCAR
Sbjct: 513  MQLLKDAQQDPDCKLYTTLISTCAKTGKVDLMFEVFHTMVNSGVEPNVHTYGALIDGCAR 572

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFG YGI+RSK VKPDRV+FNALI AC QSGA+ RAFDV++EM AE  PI+PDH
Sbjct: 573  AGQVAKAFGVYGIMRSKNVKPDRVVFNALIAACAQSGAMARAFDVVAEMEAEIQPIEPDH 632

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            VT G L+K C +AG+ +RAR+VY+MI QYNIKG+ EVYTIA+NSCS+TGDW+FA  VY+D
Sbjct: 633  VTFGTLMKACAKAGQVERAREVYKMIQQYNIKGSSEVYTIAINSCSQTGDWEFARSVYDD 692

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MT+ GV+PDEMF+SALIDVAGHA  ++AA  +LQ+AR  G ++G + YSSLMGACS A N
Sbjct: 693  MTQKGVLPDEMFLSALIDVAGHAQNLEAAFDILQQARKGGIQIGMMTYSSLMGACSKARN 752

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YE +K++KL  T ST+NAL++ALC+GDQ  KA+EVL+EMK  G+ PN++T++I
Sbjct: 753  WQKALELYEHLKSLKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKGLGLRPNSITFSI 812

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            L+VASEKKD++E   ML SQAKKDG  P  I C+C++ MCLRRF++A  +GE +L+F+SG
Sbjct: 813  LIVASEKKDDMEAAQMLFSQAKKDGAPPTLIMCRCIIGMCLRRFEKACLVGEPVLSFDSG 872

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQ++N+WTSLALTVYRE I AG  PT E+LS +LGC++F +D+ L+ R +ENLGV ++ 
Sbjct: 873  RPQVNNEWTSLALTVYRETIGAGEKPTSELLSQILGCMKFPYDTYLKNRLVENLGVSSET 932

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            SR SN+ SL+DGFGEYDPR FS+LEEAAS G+VP VSFK +PI++DA++    T EVYL+
Sbjct: 933  SRNSNLCSLIDGFGEYDPRVFSILEEAASYGVVPSVSFKVNPIVIDAKELHAFTAEVYLL 992

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LKGLKHRLAAGA+LPN+ ILLPVE T+  +P G K I +A R GQAV AL RRL +PY
Sbjct: 993  TVLKGLKHRLAAGARLPNLIILLPVEETKVSSPNGEKIIILAERAGQAVAALFRRLHIPY 1052

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ES GK+RIN L + +WFQPKLASPF G P + +SS +RL K I+ QQRNIRT  LS+
Sbjct: 1053 QGNESNGKLRINSLGLIKWFQPKLASPFSGLPGDWSSSESRLGKNISHQQRNIRTGNLSL 1112

Query: 3325 E 3327
            +
Sbjct: 1113 D 1113



 Score = 63.2 bits (152), Expect(2) = 0.0
 Identities = 97/419 (23%), Positives = 170/419 (40%), Gaps = 37/419 (8%)
 Frame = +3

Query: 177  FLGSGHRLRPPG-----LTSRRKCNKFGF-QIHRHRFLCRASLISEPXXXXXXXXXXXXX 338
            FLG  H L+PP      + SR K N+    ++H  RF+ +AS  S               
Sbjct: 28   FLGFNHTLKPPASPAPSIRSRNKTNRLSLLRLHSPRFVFKASFHSHSLIVVVVVVTLSAV 87

Query: 339  XXXYLKYIRRRDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEFTAE--VS 512
               +    +R+ ++     ++G ++   + LS  G ++  Q I++ IL   +F  +  +S
Sbjct: 88   SLLHFTLNKRKKNL-----NQGHAK---YALSPQGSNVGNQVIDSQILGFPKFQRDNSLS 139

Query: 513  VIKRNLKIEKTRENVLTSEEGDVQNQRTALMHEEIL----ISEASAKERKAIGSNLRPLV 680
             I +   I     +V   +E  +Q  +++++ E  L    I  +S+    ++  N   ++
Sbjct: 140  EIGKLNDINGKENHVFEDQEVHLQFLQSSMVQETALKTQTIDSSSSVLDSSVNDNSSEVL 199

Query: 681  ADEF-------SVHEPLDFAAEMPEFQPKKCPVEVALGSELPGQEVELVPSASPVSLRYA 839
             + F          EP+ FA EM   Q  +    V    ELP   V+    AS V +  A
Sbjct: 200  EEPFLSVTFQSGSLEPIAFAEEMT-LQVVENQDVVDSDLELPLSMVKPEHDASSVDVDNA 258

Query: 840  --TIEKNEDYKQSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRSAVSNL-RNLNA 1010
              TI ++   K     +  GV      LF  S RE LY FYE+  S   ++  L  N + 
Sbjct: 259  LSTINEHTKEKIELRAIKSGV------LFGESVREGLYMFYEDKNSASGSMKPLSSNESL 312

Query: 1011 TSPSSLQHSTRLSSLLRPNALKGVEAS-----------QGSFHTSVHQQGQMPLAHYGKG 1157
            ++ +S  +S    S +   ++ G+  S           +G+   S H++G  P  H  K 
Sbjct: 313  STGASFANSKGFPSAIGNTSVNGLRLSTDISQRNAEFVEGAVKISSHREG-FPRQHVSKN 371

Query: 1158 SYRKGKHF-SKGLEFPRDVGNGFQPQNSQREQAKSPQINGR---RTTNKHDPSEYLKTY 1322
              + G++   +   +     N   PQ+S   +    Q   +       K DPS++L  Y
Sbjct: 372  LRKAGRYLRDRERNYMDHNSNKVLPQSSHSVRVHVDQKKDKIRVHDGQKIDPSKHLSKY 430


>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1109

 Score =  938 bits (2425), Expect = 0.0
 Identities = 456/661 (68%), Positives = 552/661 (83%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            G L+MDK+YHA FF  CKSQKA+KEAFRF  LI NPTLSTFNMLL+VCASS+D E AF+V
Sbjct: 449  GSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERAFQV 508

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
             QLV+E GLK DCKLYTTLISTCAK+GKVD+MFEVFH+MVNAGVEPN +TYG LIDGCA+
Sbjct: 509  FQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDGCAK 568

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVLSEM+AE+ PI+PD 
Sbjct: 569  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQ 628

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  AG+ DRA +VY MI + +IKGTPEVYTIAVN CS+ G+W+FA  +Y+D
Sbjct: 629  ITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDD 688

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            M++ GV PDEMF+SALIDVAGH GK++AA +VL+EAR +G  LG+++YSSLMGAC NA+N
Sbjct: 689  MSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSLMGACCNAQN 748

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YEDIK I L+PT S +NALI+ALC  DQ  KA+E+ +EMKK  +CPNT+TY+ 
Sbjct: 749  WQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVDLCPNTITYST 808

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVASEKKD+L+ GLML S AKKDGV P  + C+CLL+MC RRF++A +LGE +L+ NSG
Sbjct: 809  LLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSNNSG 868

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            + Q+D+KWTSLAL VYRE I AGVVPT+E LS+VLGCLQ   D+SL+ R IENLG+  + 
Sbjct: 869  RLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPCDASLKERLIENLGLTVET 928

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            S+ SN+ SL+DGFGEYDPR+ SLLEEAASLGIVP  SFK SPI+VD R   +H  +VYL+
Sbjct: 929  SKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQVYLL 988

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LK LKHRLAAGAK+PN++ILLPVE +  QTP G KTIK+AGR+ +AV ALLRRLGLPY
Sbjct: 989  TVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGEKTIKIAGRINRAVAALLRRLGLPY 1048

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ES+GKIRING+ +KRWFQPKL SPF     + + S TRL K I+ QQR IRT  LS+
Sbjct: 1049 QGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLRKGISHQQRTIRTGDLSL 1108

Query: 3325 E 3327
            +
Sbjct: 1109 D 1109


>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1140

 Score =  938 bits (2425), Expect = 0.0
 Identities = 456/661 (68%), Positives = 552/661 (83%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            G L+MDK+YHA FF  CKSQKA+KEAFRF  LI NPTLSTFNMLL+VCASS+D E AF+V
Sbjct: 480  GSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIRNPTLSTFNMLLTVCASSRDLERAFQV 539

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
             QLV+E GLK DCKLYTTLISTCAK+GKVD+MFEVFH+MVNAGVEPN +TYG LIDGCA+
Sbjct: 540  FQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGTLIDGCAK 599

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVLSEM+AE+ PI+PD 
Sbjct: 600  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQ 659

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  AG+ DRA +VY MI + +IKGTPEVYTIAVN CS+ G+W+FA  +Y+D
Sbjct: 660  ITIGALMKACANAGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDD 719

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            M++ GV PDEMF+SALIDVAGH GK++AA +VL+EAR +G  LG+++YSSLMGAC NA+N
Sbjct: 720  MSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARTKGINLGSISYSSLMGACCNAQN 779

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YEDIK I L+PT S +NALI+ALC  DQ  KA+E+ +EMKK  +CPNT+TY+ 
Sbjct: 780  WQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKKVDLCPNTITYST 839

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVASEKKD+L+ GLML S AKKDGV P  + C+CLL+MC RRF++A +LGE +L+ NSG
Sbjct: 840  LLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSNNSG 899

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            + Q+D+KWTSLAL VYRE I AGVVPT+E LS+VLGCLQ   D+SL+ R IENLG+  + 
Sbjct: 900  RLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPCDASLKERLIENLGLTVET 959

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            S+ SN+ SL+DGFGEYDPR+ SLLEEAASLGIVP  SFK SPI+VD R   +H  +VYL+
Sbjct: 960  SKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQVYLL 1019

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LK LKHRLAAGAK+PN++ILLPVE +  QTP G KTIK+AGR+ +AV ALLRRLGLPY
Sbjct: 1020 TVLKSLKHRLAAGAKIPNISILLPVEQSHIQTPTGEKTIKIAGRINRAVAALLRRLGLPY 1079

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ES+GKIRING+ +KRWFQPKL SPF     + + S TRL K I+ QQR IRT  LS+
Sbjct: 1080 QGNESFGKIRINGVIVKRWFQPKLESPFSWEQTDFSFSQTRLRKGISHQQRTIRTGDLSL 1139

Query: 3325 E 3327
            +
Sbjct: 1140 D 1140


>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1182

 Score =  936 bits (2420), Expect = 0.0
 Identities = 455/661 (68%), Positives = 552/661 (83%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            G L+MDK+YHA FF  CKSQKA+KEAFRF  LI NPTLSTFNMLLSVCASS+D E AF+V
Sbjct: 522  GSLNMDKVYHAGFFQVCKSQKAVKEAFRFTKLIQNPTLSTFNMLLSVCASSRDLERAFQV 581

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            LQLV+E GLK DCKLYTTLISTCAK+GKVD+MFEVFH+MVNAGVEPN +TYGALIDGCA+
Sbjct: 582  LQLVRETGLKPDCKLYTTLISTCAKAGKVDTMFEVFHEMVNAGVEPNANTYGALIDGCAK 641

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVLSEM+AE+ PI+PD 
Sbjct: 642  AGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLSEMKAEARPIEPDQ 701

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  +G+ DRA +VY MI + +IKGTPEVYTIAVN CS+ G+W+FA  +Y+D
Sbjct: 702  ITIGALMKACANSGQVDRALEVYRMIDKCDIKGTPEVYTIAVNCCSQNGNWEFARSIYDD 761

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            M++ GV PDEMF+SALIDVAGH GK++AA +VL+EAR +G  LG+++YSSLMGAC NA+N
Sbjct: 762  MSKKGVNPDEMFISALIDVAGHTGKLEAAFEVLEEARAKGINLGSISYSSLMGACCNAKN 821

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YEDIK I L+PT S +NALI+ALC  DQ  KA+E+ +EMK+  +CPNT+TY+ 
Sbjct: 822  WQKALELYEDIKGINLKPTVSMMNALITALCYADQYQKALEIFSEMKRVDLCPNTITYST 881

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            LLVASEKKD+L+ GLML S AKKDGV P  + C+CLL+MC RRF++A +LGE +L+ NSG
Sbjct: 882  LLVASEKKDDLDVGLMLLSHAKKDGVAPNLVMCRCLLAMCSRRFQKACTLGEPVLSNNSG 941

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            + Q+D+KWTSLAL VYRE I AGVVPT+E LS+VLGCLQ   D+S++ R IENLG+  + 
Sbjct: 942  RLQLDSKWTSLALMVYRETIGAGVVPTIEELSLVLGCLQLPRDASIKERLIENLGLTVET 1001

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            S+ SN+ SL+DGFGEYDPR+ SLLEEAASLGIVP  SFK SPI+VD R   +H  +VYL+
Sbjct: 1002 SKGSNLCSLIDGFGEYDPRACSLLEEAASLGIVPLTSFKGSPIVVDVRNLHIHAAQVYLL 1061

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LK LKHRLAAGAK+PN++I+LPVE +  QTP G KTIK+AGR+ +AV ALLRRL LPY
Sbjct: 1062 TVLKSLKHRLAAGAKIPNISIVLPVEQSHIQTPTGQKTIKIAGRINRAVAALLRRLRLPY 1121

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ES+GKIRING+ MKRWFQPKL SPF       + S TRL K I+ QQR IRT  LS+
Sbjct: 1122 QGNESFGKIRINGVIMKRWFQPKLESPFSWEQTGFSFSQTRLRKGISHQQRTIRTGDLSL 1181

Query: 3325 E 3327
            +
Sbjct: 1182 D 1182


>gb|EYU37881.1| hypothetical protein MIMGU_mgv1a002592mg [Mimulus guttatus]
          Length = 656

 Score =  926 bits (2392), Expect = 0.0
 Identities = 449/655 (68%), Positives = 547/655 (83%)
 Frame = +1

Query: 1357 MDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKVLQLV 1536
            MDK+YHA+FF+ CKSQKA+KEA RFI LI NPTLSTFNM +SVCASSQDSEGAF+VL+ V
Sbjct: 1    MDKVYHARFFDVCKSQKAVKEASRFIRLISNPTLSTFNMFMSVCASSQDSEGAFQVLKHV 60

Query: 1537 KEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCARAGQV 1716
            +E GLKADCKLYTTLISTCAKSGKVD+MF+VFH+MVNAGVEPNLHTYGALIDGCA+AGQV
Sbjct: 61   QEVGLKADCKLYTTLISTCAKSGKVDTMFKVFHEMVNAGVEPNLHTYGALIDGCAKAGQV 120

Query: 1717 AKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDHVTVG 1896
            AKAFGAYGILRSK VKPDRV+FNALITACGQSGAVDRAFDVL+EMRAE  PI+PDH+T+G
Sbjct: 121  AKAFGAYGILRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMRAEIQPIEPDHITIG 180

Query: 1897 ALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYEDMTRN 2076
            AL+K C +A E DRAR+VY MIH++ I+GT E+YTIAVNSCS  GDW+FA  VY+DM + 
Sbjct: 181  ALMKACARADEVDRAREVYNMIHEFGIRGTAELYTIAVNSCSHHGDWEFACSVYDDMIKK 240

Query: 2077 GVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAENWQKA 2256
            GV PDEMF+SALIDVAGHAGK+DAA ++LQEAR +G ++G ++YSSLMGACSNA +W+KA
Sbjct: 241  GVAPDEMFISALIDVAGHAGKVDAAFEILQEARAKGMRIGIISYSSLMGACSNASDWKKA 300

Query: 2257 LDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAILLVA 2436
            L++YE  K +KL+PT S +NALI+ALC+ DQL KA+E L+EMK  G+CPNT+TY+ILLVA
Sbjct: 301  LELYEVTKRMKLKPTVSMMNALITALCDADQLQKAMESLSEMKSVGLCPNTITYSILLVA 360

Query: 2437 SEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSGKPQI 2616
             EKKD+LE GLML SQAKKD V P  + C+CL+ MCLRRF+ A ++GE +L+F+SG+ Q+
Sbjct: 361  CEKKDDLEAGLMLISQAKKDKVTPNLVMCRCLIGMCLRRFQAACTVGEPVLSFSSGQVQL 420

Query: 2617 DNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDASRCS 2796
            ++KWTSLAL VYRE I+AGV PTM+ LS VLGCL+  HD+S++ R IENLGV T AS+ +
Sbjct: 421  NSKWTSLALMVYRETIMAGVTPTMDELSQVLGCLKLPHDASIKNRLIENLGVNTIASKGA 480

Query: 2797 NIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLITILK 2976
            ++YSL+DGFGEYDPR+FSL+EEAASLG +P VS K SPI+VD R F+ HT EVYL+T+LK
Sbjct: 481  SLYSLIDGFGEYDPRAFSLVEEAASLGTIPVVSLKESPIVVDVRDFQFHTAEVYLLTVLK 540

Query: 2977 GLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPYQGHE 3156
            GLKHRLAAG KLPNV +LLPVE TQ QT  G K I  A R  QA+ ALLRRLGL YQG+E
Sbjct: 541  GLKHRLAAGVKLPNVLVLLPVEPTQIQTSAGEKMINFADRRSQALAALLRRLGLSYQGNE 600

Query: 3157 SYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLS 3321
            S+GK+++NGL ++ W QP+L +PF G   +      RL   ++ Q++ IRT  LS
Sbjct: 601  SFGKMKLNGLTIRMWLQPELGTPFGGKKIDRGPPLRRLGSDLSRQRQKIRTGHLS 655


>ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
            chloroplastic-like [Glycine max]
          Length = 1150

 Score =  924 bits (2387), Expect = 0.0
 Identities = 452/670 (67%), Positives = 555/670 (82%), Gaps = 9/670 (1%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            GLLDM K+YHAKFFN CK +KA+KEAF FI LI NP LSTFNML+SVCASSQDSEGAF+V
Sbjct: 481  GLLDMTKVYHAKFFNICKKRKAVKEAFDFIRLIPNPMLSTFNMLMSVCASSQDSEGAFQV 540

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            LQL+K+A L+ DCKLYTTLI TCAKSGKVD MFEVFH MVN+GVEPN+HTYGALIDGCAR
Sbjct: 541  LQLLKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCAR 600

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            AGQVAKAFGAYGI+RSK VKPDRV+FNALI AC QSGA+DRAFDVL+EM AE+ PIDPDH
Sbjct: 601  AGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPDH 660

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            VT+GAL+K C +AG+ +RA++VY+M+ +YNIKG PEVYTIA+NSCS+TGDW+FA  VY D
Sbjct: 661  VTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCPEVYTIAINSCSQTGDWEFAHTVYND 720

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MT+ G++PDE+F+SALIDVAGHA K+DAA  VLQEAR  G  +G ++YSSLMGACSNA N
Sbjct: 721  MTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQEARKGGILIGIMSYSSLMGACSNARN 780

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL++YE +K++KL  T ST+NAL++ALC+GDQ  KA+EVL EMK  G+ PN++T++I
Sbjct: 781  WQKALELYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLRPNSITFSI 840

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            L+VASEKKD++E   ML S AKKDGVVP  I C+C++ MC RRF++A  +GE +L+F+SG
Sbjct: 841  LIVASEKKDDMEAAQMLLSLAKKDGVVPNLIMCRCIIGMCQRRFEKACFVGEPVLSFDSG 900

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
            +PQ+DNKWTSLAL VYRE I AG  PT E+LS +LGCLQ  +D+S++ R +ENLGV  + 
Sbjct: 901  RPQVDNKWTSLALMVYRETIEAGEKPTSEILSQILGCLQLPYDTSVKNRLVENLGVSMET 960

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            SR SN+ SL+DGFGEYDPR+FS+LEE+AS G+VP VS K SP+++DA++    T EVYLI
Sbjct: 961  SRSSNLCSLMDGFGEYDPRAFSILEESASHGVVPSVSLKVSPVVIDAKELNASTAEVYLI 1020

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LKGLKHRLAAGA+LPN+ ILLPVE T+  +PK  K I + GR GQAVGALLRRL +P+
Sbjct: 1021 TVLKGLKHRLAAGARLPNIIILLPVEKTEVVSPKWKKNINLGGRAGQAVGALLRRLQIPH 1080

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASP---------FIGNPAELNSSSTRLAKAITDQQR 3297
            QG ES GK+RI GLA+K+WFQPKLA P         F G P + NSS +RL K+I++QQR
Sbjct: 1081 QGSESNGKLRIGGLALKKWFQPKLAYPFSVNMGSPTFSGKPGDWNSSLSRLGKSISNQQR 1140

Query: 3298 NIRTSFLSME 3327
            NIRT  LS++
Sbjct: 1141 NIRTGNLSLD 1150


>ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Cucumis sativus]
          Length = 1108

 Score =  904 bits (2336), Expect = 0.0
 Identities = 438/661 (66%), Positives = 549/661 (83%)
 Frame = +1

Query: 1345 GLLDMDKIYHAKFFNTCKSQKAIKEAFRFINLIGNPTLSTFNMLLSVCASSQDSEGAFKV 1524
            G+LDM+KIYH KFFN CKS+KA++EAF++  LI NPTLSTFNML+SVCASSQDSE AF+V
Sbjct: 448  GILDMNKIYHGKFFNICKSKKAVQEAFQYTALIQNPTLSTFNMLMSVCASSQDSERAFQV 507

Query: 1525 LQLVKEAGLKADCKLYTTLISTCAKSGKVDSMFEVFHDMVNAGVEPNLHTYGALIDGCAR 1704
            ++LV+EAG+KADCKLYTTLISTC KSGKVD+MFEVFH MVNAGVEPN+HTYGALIDGCAR
Sbjct: 508  VRLVQEAGMKADCKLYTTLISTCGKSGKVDAMFEVFHRMVNAGVEPNVHTYGALIDGCAR 567

Query: 1705 AGQVAKAFGAYGILRSKKVKPDRVIFNALITACGQSGAVDRAFDVLSEMRAESTPIDPDH 1884
            A QVAKAFG YGI+RSK VKPDRV+FNALITACGQSGAVDRAFDVL+EM AE  PI+PDH
Sbjct: 568  AAQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMGAELHPIEPDH 627

Query: 1885 VTVGALIKTCVQAGEFDRARKVYEMIHQYNIKGTPEVYTIAVNSCSETGDWDFALRVYED 2064
            +T+GAL+K C  AG+ DRAR+VY+MIH Y IKGTPEVYTIAVN CS++ DWDFA  +Y+D
Sbjct: 628  ITIGALMKACANAGQVDRAREVYKMIHDYKIKGTPEVYTIAVNCCSQSCDWDFASNIYQD 687

Query: 2065 MTRNGVVPDEMFVSALIDVAGHAGKIDAALKVLQEARVRGTKLGNVAYSSLMGACSNAEN 2244
            MTR GV PDE+F+SALIDVAGHAGK+DAA +VL EA+  G ++G V+YSSLMGACSNA+N
Sbjct: 688  MTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEAKTLGIRVGIVSYSSLMGACSNAKN 747

Query: 2245 WQKALDVYEDIKAIKLQPTTSTLNALISALCNGDQLHKAVEVLAEMKKAGVCPNTVTYAI 2424
            WQKAL +YED+K++KL+ T ST+NALI+AL +G+QL  A+++L EMK+ G+ PN +TY+I
Sbjct: 748  WQKALALYEDLKSMKLRLTVSTVNALITALSDGEQLQMAMDILTEMKELGLSPNNITYSI 807

Query: 2425 LLVASEKKDELETGLMLHSQAKKDGVVPYDITCKCLLSMCLRRFKEAHSLGERILTFNSG 2604
            L  AS++ ++LE  LML SQAK+DG+VP     +C++ MCLRR  +  SL   +++ +S 
Sbjct: 808  LTAASDRNNDLEIALMLLSQAKEDGIVPTLTMYRCIIGMCLRRIADPSSLDRPLMSLDST 867

Query: 2605 KPQIDNKWTSLALTVYREMILAGVVPTMEVLSIVLGCLQFSHDSSLRARFIENLGVMTDA 2784
             PQ+D+KWT+ AL VYRE+I AG+VP+++VLS VLGCLQ  HD +L++R IEN+GV  D+
Sbjct: 868  LPQVDSKWTAQALKVYREIIEAGIVPSIDVLSQVLGCLQIPHDPALKSRLIENIGVSADS 927

Query: 2785 SRCSNIYSLLDGFGEYDPRSFSLLEEAASLGIVPCVSFKRSPIIVDARKFKVHTVEVYLI 2964
            SR S++ SL+DGFGEYDPR+FSL EEAASLG+ P VS K +PI+VDA++ ++HT EVYL+
Sbjct: 928  SRSSSLCSLIDGFGEYDPRAFSLFEEAASLGVAPFVSLKGNPIVVDAKELQIHTAEVYLL 987

Query: 2965 TILKGLKHRLAAGAKLPNVTILLPVENTQTQTPKGLKTIKVAGRVGQAVGALLRRLGLPY 3144
            T+LKGLKHRLAAG++LPN+ ILL  E T+    KG +TI ++GRVGQAV ALLRRLGLPY
Sbjct: 988  TVLKGLKHRLAAGSRLPNIMILLSNETTEILFSKGERTINLSGRVGQAVAALLRRLGLPY 1047

Query: 3145 QGHESYGKIRINGLAMKRWFQPKLASPFIGNPAELNSSSTRLAKAITDQQRNIRTSFLSM 3324
            QG+ES GKIRINGLA++RW QPKL+    G P E  +  +RL K I+ QQR+IR   LS+
Sbjct: 1048 QGNESSGKIRINGLALRRWLQPKLSDSLSGKPGEFGTFQSRLRKGISHQQRDIRIGNLSL 1107

Query: 3325 E 3327
            +
Sbjct: 1108 D 1108



 Score = 62.4 bits (150), Expect = 2e-06
 Identities = 89/360 (24%), Positives = 150/360 (41%), Gaps = 30/360 (8%)
 Frame = +3

Query: 171  REFLGSGHRLRPP-GLTSRRKCNKFGFQIHRHRFLCRASLISEP------XXXXXXXXXX 329
            R+FLGS H LRPP  L SRR+C   G  +   R + RA+  S P                
Sbjct: 36   RQFLGSSHNLRPPDALRSRRRCRNLGLFVQSPRCILRATFSSNPVLIVVAVVTFSAVVTF 95

Query: 330  XXXXXXYLKYIRRRDDVKELSGSEGLSRLKGHELSKLGRDLVKQGIEALILALGEFTAEV 509
                  Y+   RR+ +  E S S  L+      LS+LGR  +   ++  ++   +   + 
Sbjct: 96   SAVSFIYMNLNRRKKNAVERSRSPKLA------LSQLGRG-INWSVDGHMMGFRDHHGD- 147

Query: 510  SVIKRNLKI-EKTRENVLTSEEGDV-QNQRTALMHE------------EILISEAS---- 635
              +++N+ + ++T E   + EE  V Q Q++ L HE            E+  S+ S    
Sbjct: 148  -FLEQNIAVKDRTEEKSYSGEEETVLQLQKSGLSHEASVTETLPPSVSEVTTSKDSDSLF 206

Query: 636  AKERKAIGSNLRPLVADEFSVHEPLDFAAEMPEFQPKKCPVEVALGSELP--GQEVELVP 809
            + E +A   +L   +  E  V +PL FA +M + +       V   SELP      EL P
Sbjct: 207  SDESEATDPSLLSAIF-ESGVLQPLIFANDMTDLRLNGS--HVKSHSELPVVVDTTELPP 263

Query: 810  SASPVSLRYATIEKN--EDYKQSRHEVGKGVEPPYDCLFKSSTREELYTFYEEDLSGRSA 983
               P+   Y  + ++  ED +  + E         +   +   RE++Y FYE+  S    
Sbjct: 264  VTGPLYSVYDQVTQHLKEDGELLKEEKFNS----SNFQIEEPAREDIYMFYEDTKSSNQT 319

Query: 984  VSNLRNLNATSPSSLQHSTRLSSLLRPNALKGVE-ASQGSFHTSVHQQGQMPLAHYGKGS 1160
                     +S +S  ++ + SSL+     +  E   + S   + + Q ++P   Y +GS
Sbjct: 320  -------ETSSRTSHLYNQKFSSLMVNGVSRVAELVLEDSLPVAGYVQREVPDVRYKEGS 372