BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00005042
         (805 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007029981.1| ATPase family associated with various cellul...   299   9e-79
ref|XP_002325862.1| hypothetical protein POPTR_0019s05640g [Popu...   298   2e-78
ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   297   3e-78
ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-li...   295   1e-77
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   293   4e-77
ref|XP_007222214.1| hypothetical protein PRUPE_ppa007842mg [Prun...   293   7e-77
ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-li...   292   1e-76
gb|AFK37872.1| unknown [Lotus japonicus]                              291   1e-76
ref|XP_004512764.1| PREDICTED: replication factor C subunit 3-li...   291   2e-76
ref|XP_004497659.1| PREDICTED: replication factor C subunit 3-li...   290   4e-76
ref|XP_007204690.1| hypothetical protein PRUPE_ppa007788mg [Prun...   288   2e-75
gb|AFK46759.1| unknown [Lotus japonicus]                              288   2e-75
gb|AFK43839.1| unknown [Medicago truncatula]                          285   1e-74
ref|XP_007151807.1| hypothetical protein PHAVU_004G076500g [Phas...   285   2e-74
ref|XP_006443504.1| hypothetical protein CICLE_v10020854mg [Citr...   284   2e-74
gb|EXB68032.1| Replication factor C subunit 3 [Morus notabilis]       283   4e-74
gb|EYU30337.1| hypothetical protein MIMGU_mgv1a009049mg [Mimulus...   283   5e-74
ref|XP_006288049.1| hypothetical protein CARUB_v10001283mg [Caps...   283   7e-74
ref|XP_004228337.1| PREDICTED: replication factor C subunit 3-li...   279   1e-72
ref|NP_198126.1| replication factor C subunit 3 [Arabidopsis tha...   278   2e-72

>ref|XP_007029981.1| ATPase family associated with various cellular activities (AAA)
           isoform 1 [Theobroma cacao] gi|508718586|gb|EOY10483.1|
           ATPase family associated with various cellular
           activities (AAA) isoform 1 [Theobroma cacao]
          Length = 354

 Score =  299 bits (765), Expect = 9e-79
 Identities = 147/187 (78%), Positives = 162/187 (86%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA+RSRCLN+R+N+P EE+II+VLEF+GKKEGLQLP GFAARIA ++NRSLRR
Sbjct: 168 NSSSKVTEAIRSRCLNIRVNAPSEEQIIKVLEFVGKKEGLQLPSGFAARIAEKTNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFTS+QAIPPMDWE+YISEIA+DIM+EQSPKRLF VRGK+YELLINC
Sbjct: 228 AILSFETCRVQQYPFTSSQAIPPMDWEEYISEIATDIMKEQSPKRLFQVRGKVYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   +CHWAAYYEHRM LGQKAIFHIEAFVAKFMSIYKA
Sbjct: 288 IPPEIILKRLLHELLKKLDAELKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKA 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|XP_002325862.1| hypothetical protein POPTR_0019s05640g [Populus trichocarpa]
           gi|222862737|gb|EEF00244.1| hypothetical protein
           POPTR_0019s05640g [Populus trichocarpa]
          Length = 353

 Score =  298 bits (763), Expect = 2e-78
 Identities = 149/187 (79%), Positives = 162/187 (86%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA+RSRCLN+RIN+P EE+I++VLEFIGKKEGLQLPPGFAARIA +SNRSLRR
Sbjct: 168 NSSSKVTEAIRSRCLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPF+SNQAIPPMDWE+Y+SEI SDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFSSNQAIPPMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM +GQKAIFH+EAFVAKFMSIYKA
Sbjct: 288 IPPEII-LKLLSELLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFHLEAFVAKFMSIYKA 346

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 347 FLIATFG 353


>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
           gi|296089274|emb|CBI39046.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  297 bits (761), Expect = 3e-78
 Identities = 149/187 (79%), Positives = 159/187 (85%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEAVRSRCLN+RIN+P EE+I +VLEFI KKEGLQLP GFA RIA +SNRSLRR
Sbjct: 168 NSSSKVTEAVRSRCLNIRINAPTEEQITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT+NQA+PPMDWE+Y+SEIASDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFTNNQAMPPMDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMSIYKA
Sbjct: 288 IPPEIILKRLLLELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKA 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like isoform X1 [Glycine
           max]
          Length = 354

 Score =  295 bits (756), Expect = 1e-77
 Identities = 147/187 (78%), Positives = 161/187 (86%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I++VLEFIGKKEGLQLPPGFAARIA +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNVRINAPSEEQIVQVLEFIGKKEGLQLPPGFAARIAEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRV QYPFT+ QAIPPMDWE+YISEIASDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVLQYPFTNKQAIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYE+RM LGQKAIFHIEAFVAKFMSIYK+
Sbjct: 288 IPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKS 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
           gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  293 bits (751), Expect = 4e-77
 Identities = 145/187 (77%), Positives = 159/187 (85%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I+ VLEFIGKKEGLQLPPGFAARI  +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT+ Q IPPMDWE+YISEIASDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYE+RM LGQKAIFHIEAFVAKFMSIYK+
Sbjct: 288 IPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKS 347

Query: 542 FLIATFG 562
           FLI+TFG
Sbjct: 348 FLISTFG 354


>ref|XP_007222214.1| hypothetical protein PRUPE_ppa007842mg [Prunus persica]
           gi|462419150|gb|EMJ23413.1| hypothetical protein
           PRUPE_ppa007842mg [Prunus persica]
          Length = 354

 Score =  293 bits (749), Expect = 7e-77
 Identities = 145/187 (77%), Positives = 158/187 (84%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA+RSRCLN+RIN+P EE+I++VLEFIGKKEGLQLP GF ARIA +SNRSLRR
Sbjct: 168 NSSSKVTEAIRSRCLNVRINAPTEEQIVKVLEFIGKKEGLQLPSGFPARIAEKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETC VQQYPFTSNQAIPPMDWE+Y+SEIASDIM+EQSPKRL+ VR KLYELL+NC
Sbjct: 228 AILSFETCHVQQYPFTSNQAIPPMDWEEYVSEIASDIMKEQSPKRLYQVRQKLYELLLNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFH+EAFVAKFMSIYKA
Sbjct: 288 IPPEIILKRLLFELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKA 347

Query: 542 FLIATFG 562
           FLIA FG
Sbjct: 348 FLIAAFG 354


>ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-like [Cucumis sativus]
           gi|449521275|ref|XP_004167655.1| PREDICTED: replication
           factor C subunit 3-like [Cucumis sativus]
          Length = 354

 Score =  292 bits (747), Expect = 1e-76
 Identities = 144/187 (77%), Positives = 158/187 (84%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN P EE+I +VLE+IGKKEGLQLP GFA+RIA +SNRSLRR
Sbjct: 168 NSSSRVTEAIRSRCLNVRINGPTEEQIFKVLEYIGKKEGLQLPSGFASRIAEKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPF SNQAIPPMDWE+YI+EIAS+IM+EQSPKRLF VRGKLYELL+NC
Sbjct: 228 AILSFETCRVQQYPFVSNQAIPPMDWEEYITEIASEIMKEQSPKRLFQVRGKLYELLVNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMSIYK 
Sbjct: 288 IPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKT 347

Query: 542 FLIATFG 562
           FLI+TFG
Sbjct: 348 FLISTFG 354


>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  291 bits (746), Expect = 1e-76
 Identities = 142/187 (75%), Positives = 159/187 (85%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I+ V+EFIGKKEGLQ+P GFAARIA +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNIRINAPSEEQIVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT+ Q IPPMDWE+YISEIASDIM+EQ+PKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFTNRQTIPPMDWEEYISEIASDIMKEQNPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP +I                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMS+YK+
Sbjct: 288 IPPEMILKRLLFELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKS 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|XP_004512764.1| PREDICTED: replication factor C subunit 3-like [Cicer arietinum]
          Length = 354

 Score =  291 bits (745), Expect = 2e-76
 Identities = 144/187 (77%), Positives = 157/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLNLRIN+P EE+I+ VL+FIGKKEGLQLP GFAARIA +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNLRINAPSEEQIVEVLQFIGKKEGLQLPSGFAARIAEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT  Q I PMDWE+YISEIASDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   +CHWAAYYEHRM LGQKAIFHIEAFVAKFMS+YK+
Sbjct: 288 IPPEIILKRLLYELLRKLDAELKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKS 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|XP_004497659.1| PREDICTED: replication factor C subunit 3-like [Cicer arietinum]
          Length = 354

 Score =  290 bits (742), Expect = 4e-76
 Identities = 143/187 (76%), Positives = 157/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I+ VL+FIGKKEGLQLP GFAARIA +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSGFAARIAEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT  Q I PMDWE+YISEIASDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   +CHWAAYYEHRM LGQKAIFHIEAFVAKFMS+YK+
Sbjct: 288 IPPEIILKRLLYELLRKLDAELKHEICHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKS 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|XP_007204690.1| hypothetical protein PRUPE_ppa007788mg [Prunus persica]
           gi|462400221|gb|EMJ05889.1| hypothetical protein
           PRUPE_ppa007788mg [Prunus persica]
          Length = 355

 Score =  288 bits (736), Expect = 2e-75
 Identities = 142/187 (75%), Positives = 156/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA+RSRCLN+RIN+P EE I++VLEFIGKKEGLQLP GFAARIA +SNRSLRR
Sbjct: 169 NSSSKVTEAIRSRCLNVRINAPTEERIMKVLEFIGKKEGLQLPSGFAARIAEKSNRSLRR 228

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILS ETC VQQYPFTSNQAIPPMDWE+Y+SEIASD+M+EQSPKRL+ VR KLYELL+NC
Sbjct: 229 AILSLETCHVQQYPFTSNQAIPPMDWEEYVSEIASDVMKEQSPKRLYQVRQKLYELLLNC 288

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFH+EAFVAKFMSIYK 
Sbjct: 289 IPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKG 348

Query: 542 FLIATFG 562
           FLI+ FG
Sbjct: 349 FLISAFG 355


>gb|AFK46759.1| unknown [Lotus japonicus]
          Length = 201

 Score =  288 bits (736), Expect = 2e-75
 Identities = 142/187 (75%), Positives = 157/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I+ V+EFIGKKEGLQ P GFAARIA +SNR+LRR
Sbjct: 15  NSSSRVTEAIRSRCLNIRINAPSEEQIVEVIEFIGKKEGLQFPSGFAARIAEKSNRNLRR 74

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT+ Q IPPMDWE+YISEIASDIM+EQSPKRLF VRGKLYELLINC
Sbjct: 75  AILSFETCRVQQYPFTNRQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINC 134

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP +I                   VC WAAYYEHRM LGQKAIFHIEAFVAKFMS+YK+
Sbjct: 135 IPPEMILKRLLFELLRKLDAELKHEVCLWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKS 194

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 195 FLIATFG 201


>gb|AFK43839.1| unknown [Medicago truncatula]
          Length = 354

 Score =  285 bits (730), Expect = 1e-74
 Identities = 141/187 (75%), Positives = 154/187 (82%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I+ VL+FIGKKEGLQLP   AARIA +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSLAARIAEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT  Q IPPMDWE+YISEIASDIM+EQSPKRLF VRGKLYELL NC
Sbjct: 228 AILSFETCRVQQYPFTDKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLTNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMS+YK+
Sbjct: 288 IPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKS 347

Query: 542 FLIATFG 562
           FLI TFG
Sbjct: 348 FLITTFG 354


>ref|XP_007151807.1| hypothetical protein PHAVU_004G076500g [Phaseolus vulgaris]
           gi|561025116|gb|ESW23801.1| hypothetical protein
           PHAVU_004G076500g [Phaseolus vulgaris]
          Length = 354

 Score =  285 bits (728), Expect = 2e-74
 Identities = 141/187 (75%), Positives = 156/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSS+VTEA+RSRCLN+RIN+P EE+I+ VLE IGKKE LQLPPGF ARIA +SNR+LRR
Sbjct: 168 NSSSRVTEAIRSRCLNVRINAPSEEQILEVLELIGKKEELQLPPGFGARIAEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AIL+FE+CRVQQYPFT+ Q IPPMDWE +ISEIASDIM+EQSPKRLF VRGKLY+LLINC
Sbjct: 228 AILAFESCRVQQYPFTNKQTIPPMDWEDHISEIASDIMKEQSPKRLFQVRGKLYDLLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMSIYK+
Sbjct: 288 IPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKS 347

Query: 542 FLIATFG 562
           FLIATFG
Sbjct: 348 FLIATFG 354


>ref|XP_006443504.1| hypothetical protein CICLE_v10020854mg [Citrus clementina]
           gi|568850997|ref|XP_006479181.1| PREDICTED: replication
           factor C subunit 3-like [Citrus sinensis]
           gi|557545766|gb|ESR56744.1| hypothetical protein
           CICLE_v10020854mg [Citrus clementina]
          Length = 354

 Score =  284 bits (727), Expect = 2e-74
 Identities = 137/187 (73%), Positives = 154/187 (82%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA+RSRCLN+RINSP EE+I++VLEFI KKEGLQLP GFA R+A +SNRSLRR
Sbjct: 168 NSSSKVTEAIRSRCLNIRINSPTEEQIVKVLEFIAKKEGLQLPSGFATRLAEKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPF  NQAIP MDWE+++ EIASDIMQEQSPKRLF VRGKLYELL+NC
Sbjct: 228 AILSFETCRVQQYPFKDNQAIPAMDWEEFVFEIASDIMQEQSPKRLFQVRGKLYELLLNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           +PPV++                   VCHWAAYYEH+M  G KAIFH+EAFVAKFMSIYK 
Sbjct: 288 VPPVVVLKRLLYELLKRLDAEIKHEVCHWAAYYEHKMRRGNKAIFHLEAFVAKFMSIYKG 347

Query: 542 FLIATFG 562
           FL+ATFG
Sbjct: 348 FLVATFG 354


>gb|EXB68032.1| Replication factor C subunit 3 [Morus notabilis]
          Length = 354

 Score =  283 bits (725), Expect = 4e-74
 Identities = 141/187 (75%), Positives = 156/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKV+EA+RSRCLN+RIN+P EE+I++VLEFI KKE LQ+P GFAARIA +S+RSLRR
Sbjct: 168 NSSSKVSEAIRSRCLNVRINAPTEEQIVKVLEFIAKKERLQIPSGFAARIAEKSSRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFTSNQ IPPMDWE+YI EIASDIM+EQSPKRL+ VR KLYELL+NC
Sbjct: 228 AILSFETCRVQQYPFTSNQIIPPMDWEEYIFEIASDIMKEQSPKRLYQVRHKLYELLVNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   VCHWAAYYEHRM LGQKAIFH+EAFVAKFMSIYKA
Sbjct: 288 IPPEIILKRLLFELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKA 347

Query: 542 FLIATFG 562
           FLIA FG
Sbjct: 348 FLIAAFG 354


>gb|EYU30337.1| hypothetical protein MIMGU_mgv1a009049mg [Mimulus guttatus]
          Length = 354

 Score =  283 bits (724), Expect = 5e-74
 Identities = 142/187 (75%), Positives = 153/187 (81%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA+RSRCLN+RIN+P E EI +VLEFIGKKEGLQLP GF+ RIA QSNRSLRR
Sbjct: 168 NSSSKVTEAIRSRCLNMRINAPTEGEIAKVLEFIGKKEGLQLPSGFSDRIAQQSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILSFETCRVQQYPFT NQAIPPMDWE+Y+SEIAS I +EQSPKRLF VRGKLYELLINC
Sbjct: 228 AILSFETCRVQQYPFTINQAIPPMDWEEYVSEIASSIFKEQSPKRLFEVRGKLYELLINC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   + HWAAYYEHR+ LGQKAIFH+EAFVAKFMSIYK 
Sbjct: 288 IPPEIILKRLLSELLKKLDMELKHEISHWAAYYEHRLRLGQKAIFHLEAFVAKFMSIYKG 347

Query: 542 FLIATFG 562
           FLI TFG
Sbjct: 348 FLIETFG 354


>ref|XP_006288049.1| hypothetical protein CARUB_v10001283mg [Capsella rubella]
           gi|482556755|gb|EOA20947.1| hypothetical protein
           CARUB_v10001283mg [Capsella rubella]
          Length = 354

 Score =  283 bits (723), Expect = 7e-74
 Identities = 137/187 (73%), Positives = 156/187 (83%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA++SRCLN+RIN+P +EEI++VLEF+ KKE LQLP GFAARIA +SNRSLRR
Sbjct: 168 NSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPLGFAARIAEKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILS ETCRVQ YPFTSNQ I PMDWE+Y++EIA+D+M+EQSPKRLFLVRGK+YELL+NC
Sbjct: 228 AILSLETCRVQNYPFTSNQVISPMDWEEYVAEIATDVMKEQSPKRLFLVRGKVYELLVNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP +I                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMSIYK 
Sbjct: 288 IPPEVILKKLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKN 347

Query: 542 FLIATFG 562
           FLI+TFG
Sbjct: 348 FLISTFG 354


>ref|XP_004228337.1| PREDICTED: replication factor C subunit 3-like [Solanum
           lycopersicum]
          Length = 354

 Score =  279 bits (713), Expect = 1e-72
 Identities = 138/187 (73%), Positives = 155/187 (82%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEAVRSRCLN+RIN+P EEEI+ VLEFI KKEGLQ P GFAARI  +SNR+LRR
Sbjct: 168 NSSSKVTEAVRSRCLNVRINAPMEEEIVSVLEFIAKKEGLQFPQGFAARIVEKSNRNLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           A+L+FE+CRVQQYPFT+NQ +PPMDWEQY+SEIASDIM+EQSPKRLF VRGKLYELL NC
Sbjct: 228 AVLTFESCRVQQYPFTNNQTVPPMDWEQYVSEIASDIMKEQSPKRLFEVRGKLYELLTNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP II                   V +WAA+YEHRM LGQKAIFH+EAFVAKFMSIYK+
Sbjct: 288 IPPEIILKRLLFELLKKLDSELKHEVTNWAAHYEHRMRLGQKAIFHLEAFVAKFMSIYKS 347

Query: 542 FLIATFG 562
           FLI+TFG
Sbjct: 348 FLISTFG 354


>ref|NP_198126.1| replication factor C subunit 3 [Arabidopsis thaliana]
           gi|75331114|sp|Q8VXX4.1|RFC3_ARATH RecName:
           Full=Replication factor C subunit 3; Short=AtRFC3;
           AltName: Full=Activator 1 subunit 3; AltName:
           Full=Protein EMBRYO DEFECTIVE 161; AltName: Full=Protein
           EMBRYO DEFECTIVE 251; AltName: Full=Protein EMBRYO
           DEFECTIVE 2775 gi|18389268|gb|AAL67077.1| putative
           replication factor C [Arabidopsis thaliana]
           gi|20259637|gb|AAM14175.1| putative replication factor C
           [Arabidopsis thaliana] gi|332006337|gb|AED93720.1|
           protein embryo defective 161 [Arabidopsis thaliana]
          Length = 354

 Score =  278 bits (710), Expect = 2e-72
 Identities = 134/187 (71%), Positives = 154/187 (82%)
 Frame = +2

Query: 2   NSSSKVTEAVRSRCLNLRINSPPEEEIIRVLEFIGKKEGLQLPPGFAARIAAQSNRSLRR 181
           NSSSKVTEA++SRCLN+RIN+P +EEI++VLEF+ KKE LQLP GFAARIA +SNRSLRR
Sbjct: 168 NSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRR 227

Query: 182 AILSFETCRVQQYPFTSNQAIPPMDWEQYISEIASDIMQEQSPKRLFLVRGKLYELLINC 361
           AILS ETCRVQ YPFT NQ I PMDWE+Y++EIA+D+M+EQSPK+LF VRGK+YELL+NC
Sbjct: 228 AILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNC 287

Query: 362 IPPVIIXXXXXXXXXXXXXXXXXXXVCHWAAYYEHRMCLGQKAIFHIEAFVAKFMSIYKA 541
           IPP +I                   VCHWAAYYEHRM LGQKAIFHIEAFVAKFMSIYK 
Sbjct: 288 IPPEVILKRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKN 347

Query: 542 FLIATFG 562
           FLI+TFG
Sbjct: 348 FLISTFG 354