BLASTX nr result
ID: Cocculus22_contig00004946
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00004946
(428 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera] 70 2e-24
ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis tha... 65 2e-18
dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana] 63 2e-17
emb|CBI39039.3| unnamed protein product [Vitis vinifera] 68 1e-09
gb|AEX57688.1| hypothetical protein RasatMp057 (mitochondrion) [... 65 3e-09
ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus... 65 1e-08
>emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]
Length = 150
Score = 70.1 bits (170), Expect(2) = 2e-24
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = -1
Query: 194 LSL*KKPFPEESRSSRMSMVLDSRIHSRPDPPWNFRNLQKHSRRGRVLL 48
LS+ KKP P + + VLDSRIHSRPDPPWNFRNL KHSRRG V++
Sbjct: 76 LSIYKKPLPRGEQKLQDEYVLDSRIHSRPDPPWNFRNLPKHSRRGFVMI 124
Score = 67.8 bits (164), Expect(2) = 2e-24
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -2
Query: 271 VQGHQMRDLPPTPRNRSSGRLPSTHLSLYKK 179
VQGHQMRDLPPTPRNRSSGRLPSTHLS+YKK
Sbjct: 51 VQGHQMRDLPPTPRNRSSGRLPSTHLSIYKK 81
>ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis thaliana]
gi|42570727|ref|NP_973437.1| uncharacterized protein
[Arabidopsis thaliana]
gi|44888124|sp|P93308.1|M530_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg00530;
AltName: Full=ORF109 gi|1785714|emb|CAA69737.1| unnamed
protein product [Arabidopsis thaliana]
gi|330250966|gb|AEC06060.1| uncharacterized protein
AT2G07776 [Arabidopsis thaliana]
Length = 109
Score = 64.7 bits (156), Expect(2) = 2e-18
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = -1
Query: 194 LSL*KKPFPEESRSSRMSMVLDSRIHSRPDPPWNFRNLQKHSRRGRVLL 48
LS+ KK P R + LDSRIHSRPDP WNFRNLQKHSR+G V++
Sbjct: 54 LSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 102
Score = 53.5 bits (127), Expect(2) = 2e-18
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 9/41 (21%)
Frame = -2
Query: 271 VQGHQMRDLPPTPRNRSSGRL---------PSTHLSLYKKS 176
VQGHQMRDL PTPRNRS+GRL PSTHLS++KK+
Sbjct: 20 VQGHQMRDLLPTPRNRSNGRLPSPFSRVINPSTHLSIHKKA 60
>dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]
Length = 109
Score = 62.8 bits (151), Expect(2) = 2e-17
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = -1
Query: 194 LSL*KKPFPEESRSSRMSMVLDSRIHSRPDPPWNFRNLQKHSRRGRVLL 48
L + KK P R + LDSRIHSRPDP WNFRNLQKHSR+G V++
Sbjct: 54 LPIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 102
Score = 51.6 bits (122), Expect(2) = 2e-17
Identities = 26/41 (63%), Positives = 30/41 (73%), Gaps = 9/41 (21%)
Frame = -2
Query: 271 VQGHQMRDLPPTPRNRSSGRL---------PSTHLSLYKKS 176
VQGHQMRDL PTPRNRS+GRL PSTHL ++KK+
Sbjct: 20 VQGHQMRDLLPTPRNRSNGRLPSPFSRVINPSTHLPIHKKA 60
>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = -2
Query: 271 VQGHQMRDLPPTPRNRSSGRLPSTHLSLYKKSPSQ 167
VQGHQMRDLPPTPRNRSSGRLPSTHLS+YKK S+
Sbjct: 119 VQGHQMRDLPPTPRNRSSGRLPSTHLSIYKKPLSR 153
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = -1
Query: 194 LSL*KKPFPEESRSSRMSMVLDSRIHSRPDPPWNFRNLQKHSRRGRVLL 48
LS+ KKP + + VLDSRIHSRPDPPWNF NL KHSRRG V++
Sbjct: 144 LSIYKKPLSRGEQKLQDEYVLDSRIHSRPDPPWNFWNLPKHSRRGFVMI 192
>gb|AEX57688.1| hypothetical protein RasatMp057 (mitochondrion) [Raphanus sativus]
gi|443298178|gb|AGC81722.1| hypothetical protein
DCGMS_00620 (mitochondrion) [Raphanus sativus]
Length = 159
Score = 64.7 bits (156), Expect(2) = 3e-09
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = -1
Query: 194 LSL*KKPFPEESRSSRMSMVLDSRIHSRPDPPWNFRNLQKHSRRGRVLL 48
LS+ KK P R + LDSRIHSRPDP WNFRNLQKHSR+G V++
Sbjct: 104 LSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 152
Score = 22.3 bits (46), Expect(2) = 3e-09
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 241 PTPRNRSSGRLPSTHLSLYKKS 176
P+P +R R PS HLS++KK+
Sbjct: 91 PSPFSRV--RNPSPHLSIHKKA 110
>ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus]
gi|353526373|ref|YP_004927448.1| orf159 (mitochondrion)
[Brassica oleracea] gi|353526526|ref|YP_004927596.1|
orf159 (mitochondrion) [Brassica carinata]
gi|353526717|ref|YP_004927888.1| orf159 (mitochondrion)
[Brassica rapa subsp. oleifera]
gi|353531399|ref|YP_004927791.1| orf159 (mitochondrion)
[Brassica juncea] gi|37591072|dbj|BAC98874.1|
hypothetical protein [Brassica napus]
gi|335354905|gb|AEH43461.1| orf159 [Brassica rapa subsp.
oleifera] gi|335354918|gb|AEH43473.1| orf159 [Brassica
oleracea] gi|335355057|gb|AEH43611.1| orf159 [Brassica
carinata] gi|335355132|gb|AEH43685.1| orf159 [Brassica
juncea] gi|339511333|emb|CBX48388.1| unnamed protein
product [Brassica napus]
Length = 159
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = -1
Query: 194 LSL*KKPFPEESRSSRMSMVLDSRIHSRPDPPWNFRNLQKHSRRGRVLL 48
LS+ KK P R + LDSRIHSRPDP WNFRNLQKHSR+G V++
Sbjct: 104 LSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMI 152