BLASTX nr result

ID: Cocculus22_contig00004945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00004945
         (505 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275579.2| PREDICTED: uncharacterized protein LOC100246...    70   2e-14
ref|XP_006828341.1| hypothetical protein AMTR_s00023p00248410 [A...    45   3e-10

>ref|XP_002275579.2| PREDICTED: uncharacterized protein LOC100246256 [Vitis vinifera]
          Length = 653

 Score = 70.5 bits (171), Expect(2) = 2e-14
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = -2

Query: 489 VQIEWKKPSGTIWYFSKRGIERNCTSKKCIQSNGTIIWNERFDHDCNLKLMDSQHFRSWF 310
           VQIEW  P     Y  +  I+RNCTSK+    +G++ WNE FDH C LK  DS+ FR W 
Sbjct: 41  VQIEWVGPRKA--YLLRGAIQRNCTSKQSAHPDGSVTWNECFDHHCKLKPRDSKGFRRWM 98

Query: 309 INFEIL 292
           IN +IL
Sbjct: 99  INLQIL 104



 Score = 34.3 bits (77), Expect(2) = 2e-14
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 187 SNSKTSLL-AKIKVDIAKFASPVKDTNDTISIPIKCSTQGSKVEAMLTVSMIL 32
           SN   S++ +K KVDIA FA P  ++   +  P+K    GS    + T++M L
Sbjct: 110 SNRPASIIVSKSKVDIAAFACPTANSEQIVKFPVKYCINGSTSTHVATLTMKL 162


>ref|XP_006828341.1| hypothetical protein AMTR_s00023p00248410 [Amborella trichopoda]
           gi|548832988|gb|ERM95757.1| hypothetical protein
           AMTR_s00023p00248410 [Amborella trichopoda]
          Length = 674

 Score = 45.1 bits (105), Expect(2) = 3e-10
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -2

Query: 504 RNY-LSVQIEWKKPSGTIWYFSKRGIERNCTSKKCIQSNGTIIWNERFDHDCNLKLMDSQ 328
           +NY L V+I+W+ P     +       + CT  + ++ +GT+ WNE F+H C + +    
Sbjct: 37  QNYSLMVRIKWRGPRKQ--FRKSFNSPKECTRMQLVKPDGTVEWNEGFNHVCKMMMEKMG 94

Query: 327 HFRSWFINFEI 295
            FRSW I   +
Sbjct: 95  SFRSWDIQLAV 105



 Score = 45.1 bits (105), Expect(2) = 3e-10
 Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = -1

Query: 187 SNSKTSLLAKIKVDIAKFA-SPVKDTNDTISIPIKCSTQGSKVEAMLTVS 41
           SN K S LAK+ +D+A+F  S    +  TISIPIKC+ + S +EA L VS
Sbjct: 112 SNDKASNLAKVILDVAQFIPSNSNSSKKTISIPIKCNVKDSTIEAALKVS 161


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