BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00004925
         (1965 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   445   e-122
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              441   e-121
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   399   e-108
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,...   398   e-108
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616...   385   e-104
ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citr...   385   e-104
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603...   382   e-103
ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267...   379   e-102
ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Popu...   363   2e-97
gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Moru...   361   6e-97
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   361   6e-97
ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prun...   360   1e-96
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   355   3e-95
ref|XP_004305732.1| PREDICTED: uncharacterized protein LOC101303...   350   2e-93
ref|XP_004487983.1| PREDICTED: uncharacterized protein LOC101507...   346   3e-92
ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citr...   342   4e-91
ref|XP_007138779.1| hypothetical protein PHAVU_009G236700g [Phas...   336   2e-89
ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 ...   326   2e-86
ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 ...   326   2e-86
ref|XP_004306097.1| PREDICTED: DNA-directed RNA polymerase I sub...   323   2e-85

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
            vinifera]
          Length = 421

 Score =  445 bits (1145), Expect = e-122
 Identities = 230/388 (59%), Positives = 288/388 (74%), Gaps = 1/388 (0%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSP 303
            ++VKME+VHEHPEKI P+VGYFPSGFDP K +  + D    V+V+RNK + NRL+LVVSP
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP 86

Query: 304  KRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCX 483
              SKV+FVGT++SGEAA+A+VCTYALGVLDKETQ+LKIVPI SNKIFRLEPRV G D   
Sbjct: 87   NDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSD-AS 145

Query: 484  XXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLK 663
                        TA++KA +M DLT LYGTK+S  QAKKL +L QK++P +Q+DL+ KLK
Sbjct: 146  VDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLK 205

Query: 664  GVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEE 843
             V+INKEA+E     + RNIPP+D TATTP++AY LDKII KGE DY        + G E
Sbjct: 206  EVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVE 265

Query: 844  ITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTVP 1023
            + +S Y SFVCNR  KL E++DE ++  LACI SYI HL+ +KD+ S+D A+SAK H +P
Sbjct: 266  VESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMD-ASSAKHHKIP 324

Query: 1024 GILYKKFVNMFT-DSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSV 1200
            GIL +KF +MF  DS  R  + EK++LLISYVLVLTL+AD FRTDPSDIARDLRM+ + +
Sbjct: 325  GILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKL 384

Query: 1201 RDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            R H++ LGCK    +K+   TLPVPL F
Sbjct: 385  RAHFEHLGCKLVSQNKVTMATLPVPLTF 412


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  441 bits (1134), Expect = e-121
 Identities = 228/384 (59%), Positives = 284/384 (73%), Gaps = 1/384 (0%)
 Frame = +1

Query: 136  MELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSPKRSK 315
            ME+VHEHPEKI P+VGYFPSGFDP K +  + D    V+V+RNK + NRL+LVVSP  SK
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60

Query: 316  VDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCXXXXX 495
            V+FVGT++SGEAA+A+VCTYALGVLDKETQ+LKIVPI SNKIFRLEPRV G D       
Sbjct: 61   VNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSD-ASVDEP 119

Query: 496  XXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLKGVLI 675
                    TA++KA +M DLT LYGTK+S  QAKKL +L QK++P +Q+DL+ KLK V+I
Sbjct: 120  SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVVI 179

Query: 676  NKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEEITAS 855
            NKEA+E     + RNIPP+D TATTP++AY LDKII KGE DY        + G E+ +S
Sbjct: 180  NKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESS 239

Query: 856  GYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTVPGILY 1035
             Y SFVCNR  KL E++DE ++  LACI SYI HL+ +KD+ S+D A+SAK H +PGIL 
Sbjct: 240  AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMD-ASSAKHHKIPGILN 298

Query: 1036 KKFVNMFT-DSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSVRDHY 1212
            +KF +MF  DS  R  + EK++LLISYVLVLTL+AD FRTDPSDIARDLRM+ + +R H+
Sbjct: 299  QKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHF 358

Query: 1213 KSLGCKFERDDKMLFVTLPVPLQF 1284
            + LGCK    +K+   TLPVPL F
Sbjct: 359  EHLGCKLVSQNKVTMATLPVPLTF 382


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
            gi|449480549|ref|XP_004155927.1| PREDICTED:
            uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  399 bits (1026), Expect = e-108
 Identities = 205/388 (52%), Positives = 273/388 (70%), Gaps = 1/388 (0%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSP 303
            +D K++++   P+K  PVVGYFPSGFDP K    ++   V  RVY++K + NR++LVVSP
Sbjct: 41   MDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSP 100

Query: 304  KRSKVDFVGTNHSGEAAAAKV-CTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYC 480
              S VDFVGTN+ GEA A K  CTYALGVLDK TQSLKIVPI SN IFRL+P+V G D  
Sbjct: 101  TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVT 160

Query: 481  XXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKL 660
                       ++  QDKAN+M +LT LYGTK+S+ QA+KL +LKQ+++P T+ DL+ ++
Sbjct: 161  ENESPSVANEELS-GQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGRM 219

Query: 661  KGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGE 840
            K V++NKEA+E       RNIP ++ +ATTP++AYPLDKIILKGE  +        +   
Sbjct: 220  KNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQETA 279

Query: 841  EITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTV 1020
            EI+A+ YPSFV NR +KL +IQDE ++KKL CI SYI HLI +KDQ S+   +SAK H +
Sbjct: 280  EISAT-YPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHKI 338

Query: 1021 PGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSV 1200
            P +L +KF +MF  +  R  SA+K NLLIS+VLVL+LFAD F +DP+DIA+DLR +   +
Sbjct: 339  PSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYDL 398

Query: 1201 RDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            R H+ +LGCKF R + +   TLP+PLQF
Sbjct: 399  RLHFDNLGCKFIRKNNLSLATLPIPLQF 426


>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
            polymerase I subunit rpa49, putative [Theobroma cacao]
          Length = 457

 Score =  398 bits (1023), Expect = e-108
 Identities = 203/403 (50%), Positives = 281/403 (69%), Gaps = 18/403 (4%)
 Frame = +1

Query: 130  VKMELVHEHPEKIAPVVGYFPSGFDPEKS-------RTSQEDDEVG---------VRVYR 261
            VK++L  + P KI P+V YFPSG++P K+          +E++E G         V+VYR
Sbjct: 45   VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVYR 104

Query: 262  N--KEKQNRLELVVSPKRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSN 435
            N  + K NRL++VVSP  S VDFVG+N+SGEAAAA+VC Y+LGVLD+ET++LKI+PI SN
Sbjct: 105  NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPIASN 164

Query: 436  KIFRLEPRVVGVDYCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLK 615
            KIFRLEPRV   +             + T +DK +KM +LT LYGTK+ R + K L +LK
Sbjct: 165  KIFRLEPRVRSSETANKDVSSSVKSELTT-EDKEDKMGELTALYGTKKDRKKRKDLNNLK 223

Query: 616  QKEEPNTQEDLESKLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGE 795
            ++ +P +Q+ L+ K++ V  NKEA+        RNIPPHD++ATTP +AYPLDKIILKG+
Sbjct: 224  KEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILKGD 283

Query: 796  LDYXXXXXXXXKPGEEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKD 975
             ++        + G E+ ++ YP+FVCNR +KL  IQDE +++KL+C+ S+I HL+ F D
Sbjct: 284  WEFLGDIYGLLEVGAEVASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVKFND 343

Query: 976  QRSIDYANSAKDHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTD 1155
            Q S+D   SAK H +P I+ ++F  MFTD G R+ S ++ NLLISYVLVLTL ADGFRTD
Sbjct: 344  QFSMDRVASAKGHKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHADGFRTD 403

Query: 1156 PSDIARDLRMTTMSVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            PSDIA+DLRM+++ +R H+++LGCK  R++  +F TLPVPL+F
Sbjct: 404  PSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKF 446


>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
          Length = 447

 Score =  385 bits (988), Expect = e-104
 Identities = 200/392 (51%), Positives = 265/392 (67%), Gaps = 4/392 (1%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRN----KEKQNRLE 288
            R+  K++ + E P K  P+VGYFPS + P+     +E     VRVYRN    K +  R+E
Sbjct: 52   RVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEM-RPKVRVYRNMNEKKNRTGRME 110

Query: 289  LVVSPKRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVG 468
            LVVSP+ S VD+VGT++SGEA A + C YA+GVLD+ TQ+LKIVPI +NKIFRLEPRV G
Sbjct: 111  LVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRG 170

Query: 469  VDYCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDL 648
             D               +A+ +AN    L   YGTK+S  Q+KK+ +L ++ +P +Q+DL
Sbjct: 171  SDVADKDAGKGEI----SAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDL 226

Query: 649  ESKLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXX 828
              K+K V INKEA+E     T  N+PP+D  ATTP++AYPLDKIILKGE D+        
Sbjct: 227  ALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHV 286

Query: 829  KPGEEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAK 1008
              G E+ +  YPSFVCNR HKL EIQD+++++ LA I SYI HL+ FKDQ S+D   SAK
Sbjct: 287  SAGSEVISDAYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAK 346

Query: 1009 DHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMT 1188
             H +P IL++KF+  F+D+  +  S +K +LLISYVLVLTL AD FRT+P+DIA+DLRM+
Sbjct: 347  QHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMS 406

Query: 1189 TMSVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
               +RDH++ LGCK  R+  ML+ TLPVPLQF
Sbjct: 407  EFKLRDHFEKLGCKLLREKNMLYATLPVPLQF 438


>ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528587|gb|ESR39837.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 447

 Score =  385 bits (988), Expect = e-104
 Identities = 200/392 (51%), Positives = 265/392 (67%), Gaps = 4/392 (1%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRN----KEKQNRLE 288
            R+  K++ + E P K  P+VGYFPS + P+     +E     VRVYRN    K +  R+E
Sbjct: 52   RVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEM-RPKVRVYRNMNEKKNRTGRME 110

Query: 289  LVVSPKRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVG 468
            LVVSP+ S VD+VGT++SGEA A + C YA+GVLD+ TQ+LKIVPI +NKIFRLEPRV G
Sbjct: 111  LVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRG 170

Query: 469  VDYCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDL 648
             D               +A+ +AN    L   YGTK+S  Q+KK+ +L ++ +P +Q+DL
Sbjct: 171  SDVADKDAGKGEI----SAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDL 226

Query: 649  ESKLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXX 828
              K+K V INKEA+E     T  N+PP+D  ATTP++AYPLDKIILKGE D+        
Sbjct: 227  ALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHV 286

Query: 829  KPGEEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAK 1008
              G E+ +  YPSFVCNR HKL EIQD+++++ LA I SYI HL+ FKDQ S+D   SAK
Sbjct: 287  SAGSEVISDAYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAK 346

Query: 1009 DHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMT 1188
             H +P IL++KF+  F+D+  +  S +K +LLISYVLVLTL AD FRT+P+DIA+DLRM+
Sbjct: 347  QHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMS 406

Query: 1189 TMSVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
               +RDH++ LGCK  R+  ML+ TLPVPLQF
Sbjct: 407  EFKLRDHFEKLGCKLLREKNMLYATLPVPLQF 438


>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
          Length = 431

 Score =  382 bits (980), Expect = e-103
 Identities = 200/388 (51%), Positives = 273/388 (70%), Gaps = 3/388 (0%)
 Frame = +1

Query: 130  VKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQED--DEVGVRVYRNKEKQNRLELVVSP 303
            V ME + E+P  I+P+VGYFPSG+DP    T+  D  +E+  ++YRN ++ NRL+LVVSP
Sbjct: 40   VTMETIAENPNNISPIVGYFPSGYDP---LTNNNDGVEELSTKLYRNAKRNNRLQLVVSP 96

Query: 304  KRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCX 483
              S+VDFVGTN+SGEA +A++CTY+LG+LDKETQ+LKIVPI +NKI RLEPRV G++   
Sbjct: 97   NGSQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGLEAQE 156

Query: 484  XXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLK 663
                      + TA+++ +KM +LT  Y +K++  QA+KL SL+Q+E+   QE+ +  + 
Sbjct: 157  TEDPDTAKQEL-TAEERNDKMRELTQKYSSKKTIRQARKLDSLRQQEDTGNQEEFDRNIA 215

Query: 664  GVLINKEAMEI-VDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGE 840
            G  INKEA+E+ V   + RNIPPHD  AT P+ AYPLD+II KGE D+        + G 
Sbjct: 216  GA-INKEALEVAVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGA 274

Query: 841  EITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTV 1020
            E+T   YPSFVCNR++KL  IQDE ++K+LA I S+I HL+ FKD+ S+D  +SAK H  
Sbjct: 275  EMTPDLYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFKDKHSMDGVSSAKHHKF 334

Query: 1021 PGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSV 1200
            PGIL +KF +MF+ S  +    EK  LLI+YVLVLTLFAD FR+DPSDIA+DLR+  +++
Sbjct: 335  PGILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDPSDIAKDLRINAVAL 394

Query: 1201 RDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            R  Y+ LGCK  R+  ++  TLPVPL F
Sbjct: 395  RPFYEYLGCKLVREKNVVLATLPVPLVF 422


>ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267531 [Solanum
            lycopersicum]
          Length = 410

 Score =  379 bits (974), Expect = e-102
 Identities = 199/386 (51%), Positives = 273/386 (70%), Gaps = 1/386 (0%)
 Frame = +1

Query: 130  VKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSPKR 309
            V ME + E+P  I+P+VGYFPSG+DP ++ T+   +E+  ++YRN  + NRL++VVSP  
Sbjct: 19   VTMETIAENPNNISPMVGYFPSGYDPLRN-TNDGVEELSTKLYRNVRRNNRLQVVVSPYG 77

Query: 310  SKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCXXX 489
            S+VDFVGTN+SGEA +A++CTY+LG+LDKETQ+LKIVPI +NKI RLEPRV G +     
Sbjct: 78   SQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSEVPDAE 137

Query: 490  XXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLKGV 669
                    + TA+++ +KM +LT +Y +K+S  QA+KL SL+Q+E+   QE+ +  + G 
Sbjct: 138  DPDTAKQEL-TAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGA 196

Query: 670  LINKEAMEI-VDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEEI 846
             INKEA+E+ V   + RNIPPHD  AT P+ AYPLD+II KGE D+        + G E+
Sbjct: 197  -INKEALEVTVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEM 255

Query: 847  TASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTVPG 1026
            T   YPSFV NR++KL  IQDE ++K+LA ILS+I HL+ FKD+ S+D  +SAK H  PG
Sbjct: 256  TPDLYPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFKDKHSMDGVSSAKHHKFPG 315

Query: 1027 ILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSVRD 1206
            IL +KF +MF+ S  +    EK  LLI+YVLVLTLFAD FR+DPSDIA+DLR+  +++R 
Sbjct: 316  ILSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDPSDIAKDLRINAVALRP 375

Query: 1207 HYKSLGCKFERDDKMLFVTLPVPLQF 1284
             Y+ LGCK  R+  ++  TLPVPL F
Sbjct: 376  FYEYLGCKLVREKNIVLATLPVPLVF 401


>ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Populus trichocarpa]
            gi|550347732|gb|ERP65843.1| hypothetical protein
            POPTR_0001s20580g [Populus trichocarpa]
          Length = 472

 Score =  363 bits (932), Expect = 2e-97
 Identities = 193/412 (46%), Positives = 268/412 (65%), Gaps = 24/412 (5%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEV--------GVRVYRNKEK- 273
            RLDVK+ELV+   +K  PVVGYFPSG++P K+    +  E          V++YRN ++ 
Sbjct: 53   RLDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNAQRA 112

Query: 274  ---------------QNRLELVVSPKRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQS 408
                             RLELVVSP  S V+FVG ++ GEA AA++CTYALGVLDK TQ+
Sbjct: 113  KVEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAAQLCTYALGVLDKATQT 172

Query: 409  LKIVPITSNKIFRLEPRVVGVDYCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRN 588
            LKI+PI  NKI RLEP++ G               + TA+ +A ++  L + YG K+S  
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEI-TAEQRAARIRQLNVQYGPKKSII 231

Query: 589  QAKKLASLKQKEEPNTQEDLESKLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYP 768
            Q KK+ +L++ ++P +Q+DL  K++   INK+A+E   G + RNIPP++++A TP++AYP
Sbjct: 232  QDKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYP 291

Query: 769  LDKIILKGELDYXXXXXXXXKPGEEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSY 948
            LD IIL GE D+        + G E+ ++ YP+FVCNR  KL EIQDE+++K+L+CI SY
Sbjct: 292  LDGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIFSY 351

Query: 949  IAHLINFKDQRSIDYANSAKDHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLT 1128
            I HL+ FKDQ S+D A SA++H  P I+ +KF  MF    RR  S +K +LLISYVLVLT
Sbjct: 352  ITHLLKFKDQHSMDGAASARNHQFPSIIRQKFFEMFKPETRR-LSVDKIDLLISYVLVLT 410

Query: 1129 LFADGFRTDPSDIARDLRMTTMSVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            L+AD FRT P+D++ DLRM   +V+ HY++LGCK ER+     VTL VPL+F
Sbjct: 411  LYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEF 462


>gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
          Length = 438

 Score =  361 bits (927), Expect = 6e-97
 Identities = 189/389 (48%), Positives = 261/389 (67%), Gaps = 1/389 (0%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVS 300
            +++  +++V   PE+  P+VGYFPSGFDP K    +       RV+RN+ K  RL+LVVS
Sbjct: 42   KVEATIQVVQNQPERAPPLVGYFPSGFDP-KDGDDESSATAMARVFRNRNKPKRLQLVVS 100

Query: 301  PKRSKVDFVGTNHSGEAAAAKV-CTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDY 477
            P  + VDFVGTN+SGEA A +  C YALGVLDKETQ+LKIVPI SNKIFRLEP+V G+  
Sbjct: 101  PNGANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRGLRL 160

Query: 478  CXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESK 657
                          +A  K+ K+  LT  YGT +S  +AKK  +L Q ++P TQ+D++ K
Sbjct: 161  -PNKDSGSLAEGERSALSKSEKIKGLTDRYGTNKSIREAKKRDALYQNDDPETQKDMDEK 219

Query: 658  LKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPG 837
            +K ++I K+A+E     T RNIPP++  AT+ ++AYP++KIILKGE D+        +  
Sbjct: 220  IKQIVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQEE 279

Query: 838  EEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHT 1017
             E+ +  YPSF+ NR   L E +DE ++K+ ACI SYI HLI FKD  S+D  +SAK H 
Sbjct: 280  AELKSDDYPSFISNRIQNLRETEDEEEKKRRACIFSYITHLIKFKDLHSMDGVSSAKRHK 339

Query: 1018 VPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMS 1197
             P IL +KF  MF  S  ++ ++++ +LLISYVLVLTL+AD F+T+ +DIA+DLRMT+++
Sbjct: 340  FPSILRQKFSAMFLSSEVKKLASKENDLLISYVLVLTLYADRFQTNLTDIAKDLRMTSVT 399

Query: 1198 VRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            +R HY+ LGCK  R + + F TLPVPLQF
Sbjct: 400  LRVHYEQLGCKLVRQNNLWFATLPVPLQF 428


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine
            max]
          Length = 424

 Score =  361 bits (927), Expect = 6e-97
 Identities = 194/388 (50%), Positives = 254/388 (65%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVS 300
            +++V++E+V EHP K  PVVGYFPSGFDP K+      +    +VYR++    RLELVV 
Sbjct: 35   QIEVEVEVVREHPNKTPPVVGYFPSGFDPVKNHGGGPSN---FQVYRHRSMPKRLELVVR 91

Query: 301  PKRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYC 480
            P RS V+FVGT+++GEAAA     YALGVLDKE  +LK+VPI  NKIFRLEP+V GV   
Sbjct: 92   PPRSSVEFVGTSYAGEAAARHRAKYALGVLDKEAGTLKVVPIAGNKIFRLEPKVKGVGAF 151

Query: 481  XXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKL 660
                       +   Q    K  + T ++GTK+   +AKK  +L+Q E+P++Q +L+ K+
Sbjct: 152  ENEPANSTLEEMTQQQ----KFAETTSIWGTKKDIEKAKKKLALRQDEDPDSQRNLDVKM 207

Query: 661  KGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGE 840
            K V +NK+A+E  +    RNIPP+D +ATTP++AY LDKIILKGE DY        + GE
Sbjct: 208  KSVTVNKKALESTESHVSRNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNNLQRGE 267

Query: 841  EITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTV 1020
            E   S YP+FV NR  +L +I+DE ++K+L+CI SYI HLI FKDQ S D   SAK H +
Sbjct: 268  EADFSAYPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIKFKDQHSFDVL-SAKGHKI 326

Query: 1021 PGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSV 1200
            P IL  KF NMF  S  +    EK +LLI YVLVLTLF+D FRTD +DIA+DL M  + V
Sbjct: 327  PNILRHKFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPV 386

Query: 1201 RDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            R  Y+ LGCK  R   + + TLPVPL+F
Sbjct: 387  RQLYEHLGCKISRQKNIFYATLPVPLKF 414


>ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
            gi|462411576|gb|EMJ16625.1| hypothetical protein
            PRUPE_ppa006096mg [Prunus persica]
          Length = 427

 Score =  360 bits (925), Expect = 1e-96
 Identities = 187/384 (48%), Positives = 263/384 (68%), Gaps = 1/384 (0%)
 Frame = +1

Query: 136  MELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSPKRSK 315
            +++V + PEK  P+VGYFP  FDP KS  S   D   V ++R+ +K  RL++VV+P  + 
Sbjct: 38   IQVVPDIPEKTPPLVGYFPCSFDPTKSPYSNSTD---VGLFRDSKKPRRLQIVVTPNGTN 94

Query: 316  VDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCXXXXX 495
            VDFVGTN++GEA   + C +ALGVLDK TQ+LKI+P+ SNKIFRL+P V G +Y      
Sbjct: 95   VDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAKEPE 154

Query: 496  XXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLKGVLI 675
                  + T ++KA K  +L   YGTK++  ++KKL SLKQ++ P +Q+DL++K+K ++ 
Sbjct: 155  SSVKEQL-TGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLIVP 213

Query: 676  NKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEEITAS 855
            NKEA+E  +    R+IPP + +ATTP++AY LDKIIL GE D         + G E++  
Sbjct: 214  NKEALESTESQISRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGAEVSWD 273

Query: 856  GYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTVPGILY 1035
             +P FVC+R HKL +I+ + ++ KL+CI SYI HLI FKDQ S+D  +S++ H +P +L+
Sbjct: 274  AFPRFVCHRIHKLQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRIPNLLF 333

Query: 1036 KKFVNMF-TDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSVRDHY 1212
             KF  MF T+S  +  S EK NLLISYVLVLTLF D F TD +DIA+DLRM+ +++R HY
Sbjct: 334  HKFSTMFPTES--KGLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHY 391

Query: 1213 KSLGCKFERDDKMLFVTLPVPLQF 1284
            ++LGCK  R   ++F TLPVPLQF
Sbjct: 392  ENLGCKLVRKRNVMFATLPVPLQF 415


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
            communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
            polymerase I 49 kDa polypeptide, putative [Ricinus
            communis]
          Length = 481

 Score =  355 bits (912), Expect = 3e-95
 Identities = 190/416 (45%), Positives = 267/416 (64%), Gaps = 29/416 (6%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSR-------TSQEDD------EVGVRVYRN 264
            L+VK+E++++  +K  P+VGYFPSG+ P K         TS E++      +  V+ YRN
Sbjct: 58   LNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYRN 117

Query: 265  KEK----------------QNRLELVVSPKRSKVDFVGTNHSGEAAAAKVCTYALGVLDK 396
             ++                  R+ELVVSP  S VDFVG ++ GEA AA++CTYALGVLDK
Sbjct: 118  AQRTKIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAAQLCTYALGVLDK 177

Query: 397  ETQSLKIVPITSNKIFRLEPRVVGVDYCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTK 576
            +T++LKI+PI  NKIFRLEP++ GVD             ++  ++ A +   LT  YGTK
Sbjct: 178  KTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSK-ENMAVRKKTLTDTYGTK 236

Query: 577  RSRNQAKKLASLKQKEEPNTQEDLESKLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPE 756
            +S  Q K++  + Q + P +++DL+ K+  V++NK A+E       RNIPPH+T+ATTP+
Sbjct: 237  KSITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSATTPQ 296

Query: 757  KAYPLDKIILKGELDYXXXXXXXXKPGEEITASGYPSFVCNRAHKLLEIQDELQQKKLAC 936
            +AYPL +IIL GE DY        + GE    + YP FV NR HKL EIQDE+++K  + 
Sbjct: 297  EAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDEVERKTYSR 356

Query: 937  ILSYIAHLINFKDQRSIDYANSAKDHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYV 1116
            I SYI HL+ FKD  S+D  +SAK+H  P IL +KF+ MFT   R+    EK +LLISYV
Sbjct: 357  IFSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGMFTPESRK-LPVEKIDLLISYV 415

Query: 1117 LVLTLFADGFRTDPSDIARDLRMTTMSVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            LVL+L+AD FRTDP+DIA+DLR++ + VR H+++LGCK   ++K+   TLPVPL+F
Sbjct: 416  LVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPVPLKF 471


>ref|XP_004305732.1| PREDICTED: uncharacterized protein LOC101303149 [Fragaria vesca
            subsp. vesca]
          Length = 425

 Score =  350 bits (897), Expect = 2e-93
 Identities = 187/390 (47%), Positives = 265/390 (67%), Gaps = 2/390 (0%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQN-RLELVV 297
            ++   + ++  +PE+I P+VGYFPSGFDP ++    + D   V V+R+KE+   RL++VV
Sbjct: 32   QVQATIRVIPGNPERIPPLVGYFPSGFDPTQN---PDPDSTKVGVFRHKERGGTRLQVVV 88

Query: 298  SP-KRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVD 474
            +P K  KVDFVGT+++GEA A ++C+Y LG+LDK TQ+LKIVPI SNKIFRLE ++ G+D
Sbjct: 89   TPNKEPKVDFVGTSYAGEAQAGELCSYGLGILDKATQTLKIVPIASNKIFRLEAKIQGLD 148

Query: 475  YCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLES 654
                         ++T + KA + N+L  LYGTK+S  Q KK+ +LKQ+++P++Q DL++
Sbjct: 149  SAGKEPAGSGIGELSTLE-KAKRRNELHNLYGTKKSIRQNKKMQTLKQEDDPDSQNDLDA 207

Query: 655  KLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKP 834
              +G +I++E  E  +G   RN PP + +ATTP +AYPLDKII   E  +        + 
Sbjct: 208  IKQG-MIDREDTEASEGHKDRNTPPFNASATTPHEAYPLDKIITTEEWKFLQDIYKLSEG 266

Query: 835  GEEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDH 1014
            G EI+   +P+FVCNR HKL  I+DE ++ KL+CI SYI HL+ FKD  S+D  +SAK H
Sbjct: 267  GAEISQVSFPAFVCNRVHKLQLIEDEDKRNKLSCIFSYITHLVKFKDLHSMDGFSSAKGH 326

Query: 1015 TVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTM 1194
              P ++  KF  MF D+  +  S EK NLLISYVLVLTLFAD F+T  +DIA+DLRM+  
Sbjct: 327  RFPSMIKDKFSTMF-DAVSKRLSTEKNNLLISYVLVLTLFADEFQTSMTDIAKDLRMSNA 385

Query: 1195 SVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
            ++R HY++LGCK  + + +  VTLPVPLQF
Sbjct: 386  TLRTHYETLGCKVSKKNDVSTVTLPVPLQF 415


>ref|XP_004487983.1| PREDICTED: uncharacterized protein LOC101507754 [Cicer arietinum]
          Length = 418

 Score =  346 bits (887), Expect = 3e-92
 Identities = 184/387 (47%), Positives = 246/387 (63%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSP 303
            +  K+++V E+P KI P +GYFPSGFDP KS +       G +VYRNK    RLELVVSP
Sbjct: 26   VQAKVKVVRENPNKIPPYIGYFPSGFDPVKSTSVS----AGFQVYRNKNMTKRLELVVSP 81

Query: 304  KRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCX 483
              S VDFVGTN+ GEA  +    YALGV DKE+Q+LK+VPI +NKIFRL+P+V GV+Y  
Sbjct: 82   AGSSVDFVGTNYMGEATGSHRSMYALGVFDKESQTLKVVPIGANKIFRLDPKVKGVEYNL 141

Query: 484  XXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLK 663
                        + +  A K    T + GTKR      K+  +++ +EP ++++L  K+K
Sbjct: 142  YKESANGTVEELSPEQTAAKRRHSTAVLGTKRHIESTNKILDMRKDDEPESKKNLVEKMK 201

Query: 664  GVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEE 843
             V++N+ A+   + +  RNIPP+DT+ATTP++AY LD+IIL+ E  Y        + GE 
Sbjct: 202  NVVVNEAALANTEATVSRNIPPYDTSATTPQEAYVLDRIILEREWSYLEDIYYILEQGEA 261

Query: 844  ITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTVP 1023
               S YP F+ NR  +L +I+DE ++KK  CILSYI HLI FKDQ S+D  +SAK H +P
Sbjct: 262  ANFSAYPIFIRNRIGRLKKIEDESEKKKQFCILSYINHLIKFKDQHSMDGVSSAKSHKIP 321

Query: 1024 GILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSVR 1203
             IL  KF+ MF  S  +    EK NLLISYVLVLTLF DGF+TD  DIA+DLRM+ + +R
Sbjct: 322  TILRSKFLTMFDVSESKRLPTEKINLLISYVLVLTLFIDGFQTDYKDIAKDLRMSLIPLR 381

Query: 1204 DHYKSLGCKFERDDKMLFVTLPVPLQF 1284
              Y+ LG K    DK  +  LP+PL F
Sbjct: 382  LLYEHLGGKIVFQDKKSYAILPIPLTF 408


>ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528588|gb|ESR39838.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 426

 Score =  342 bits (877), Expect = 4e-91
 Identities = 186/392 (47%), Positives = 249/392 (63%), Gaps = 4/392 (1%)
 Frame = +1

Query: 121  RLDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRN----KEKQNRLE 288
            R+  K++ + E P K  P+VGYFPS + P+     +E     VRVYRN    K +  R+E
Sbjct: 52   RVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEM-RPKVRVYRNMNEKKNRTGRME 110

Query: 289  LVVSPKRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVG 468
            LVVSP+ S VD+VGT++SGEA A + C YA+GVLD+ TQ+LKIVPI +NKIFRLEPRV G
Sbjct: 111  LVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRG 170

Query: 469  VDYCXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDL 648
             D               +A+ +AN    L   YGTK+S  Q+KK+ +L ++ +P +Q+DL
Sbjct: 171  SDVADKDAGKGEI----SAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDL 226

Query: 649  ESKLKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXX 828
              K+K V INKEA+E     T  N+PP+D  ATTP++AYPLDKIILKGE D+        
Sbjct: 227  ALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHV 286

Query: 829  KPGEEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAK 1008
              G E                     D+++++ LA I SYI HL+ FKDQ S+D   SAK
Sbjct: 287  SAGSE---------------------DDVEKQTLASIFSYITHLVKFKDQHSMDGGASAK 325

Query: 1009 DHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMT 1188
             H +P IL++KF+  F+D+  +  S +K +LLISYVLVLTL AD FRT+P+DIA+DLRM+
Sbjct: 326  QHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMS 385

Query: 1189 TMSVRDHYKSLGCKFERDDKMLFVTLPVPLQF 1284
               +RDH++ LGCK  R+  ML+ TLPVPLQF
Sbjct: 386  EFKLRDHFEKLGCKLLREKNMLYATLPVPLQF 417


>ref|XP_007138779.1| hypothetical protein PHAVU_009G236700g [Phaseolus vulgaris]
            gi|561011866|gb|ESW10773.1| hypothetical protein
            PHAVU_009G236700g [Phaseolus vulgaris]
          Length = 426

 Score =  336 bits (862), Expect = 2e-89
 Identities = 188/390 (48%), Positives = 246/390 (63%), Gaps = 3/390 (0%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSP 303
            ++V++E+V EHP    P+VGYFPSGFDP K+  +        ++YR++    R+++VV P
Sbjct: 34   IEVEVEVVREHPNITPPIVGYFPSGFDPVKNHANGHGP-CDFQLYRHRNMSKRMQVVVRP 92

Query: 304  KRSKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCX 483
             RS V+FVGT+ SGEAAA +   +ALGVLDKE  SLKIVPI  NK+FRLEP+V  V    
Sbjct: 93   PRSSVEFVGTSFSGEAAAGQRSMFALGVLDKEAGSLKIVPIAGNKVFRLEPKVKAVGAAD 152

Query: 484  XXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLK 663
                      +   Q  A    + T ++GTK+   +AKK  +LKQ E P++Q +L+ K++
Sbjct: 153  NEPASSALEDMTPQQMFA----ETTAIWGTKKDIEKAKKKLALKQDENPDSQRNLDVKMR 208

Query: 664  GVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEE 843
             V +NK A+E  +    RN+PP+DT+ATTP++AY LDKIILKGE DY           EE
Sbjct: 209  NVSVNKSALESTESHVSRNVPPYDTSATTPQEAYVLDKIILKGEWDYLEDIYCILHQ-EE 267

Query: 844  ITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHTVP 1023
               S YP+FV NR  +L +I+DE +++K +CI SYI HLI FKDQ S D   +AK H +P
Sbjct: 268  ADFSSYPTFVRNRIQRLRKIKDESEKRKHSCICSYINHLIKFKDQHSFD-VFTAKGHKIP 326

Query: 1024 GILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMSVR 1203
             IL  KF NMF  S  R    EK +LL+ YVLVLTLFAD F TD  DIA+DL M  M+VR
Sbjct: 327  NILRHKFANMFAVSELRRLPPEKISLLVCYVLVLTLFADDFLTDCVDIAKDLGMNVMAVR 386

Query: 1204 DHYKSLGCKFERDDKM---LFVTLPVPLQF 1284
              Y+ LGCKF R  K       TLPVPL+F
Sbjct: 387  KVYEQLGCKFSRQKKSWDGWCATLPVPLKF 416


>ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
            gi|355484106|gb|AES65309.1| DNA-directed RNA polymerase I
            subunit rpa49 [Medicago truncatula]
          Length = 411

 Score =  326 bits (836), Expect = 2e-86
 Identities = 178/390 (45%), Positives = 245/390 (62%), Gaps = 2/390 (0%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSP 303
            +  K+E+V   P K+ P +GYF SGFDP KS +  +     V+VYRNK    R ELVVSP
Sbjct: 14   VQAKIEVVSSDPSKMPPFIGYFTSGFDPVKSSSGTD-----VQVYRNKVMHKRTELVVSP 68

Query: 304  KRSKVDFVGTNHSGEAAAA--KVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDY 477
              S V+FVGT++ GEA AA     TY LGV DKE+Q+LKIVPI  NKIFRLEPRV GV+Y
Sbjct: 69   AGSSVEFVGTSYEGEAVAAARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEPRVKGVEY 128

Query: 478  CXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESK 657
                          TA+  A K  +     GTKRS     +LA ++  EEP  +++L+ K
Sbjct: 129  KEPPPTPIKMVEEMTAEQLAEKKRNTDAALGTKRSNKMHSRLADMRGDEEPEAKKNLDEK 188

Query: 658  LKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPG 837
            +K V + + A+   +    R+IPP++++ATTP++AY LDKIIL  E +Y        +  
Sbjct: 189  MKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIILAEEWNYLQDIYYSLQKE 248

Query: 838  EEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHT 1017
                 S YPSF+ NR ++L +I+D+ ++KK +CILS+I +L+ FKDQ S+D  +S+K   
Sbjct: 249  VAADFSLYPSFIRNRINRLKKIEDDSEKKKHSCILSFINYLVKFKDQHSMDGISSSKFEK 308

Query: 1018 VPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMS 1197
            +P  L+ +F  MF  +  R    EK NLLISYVLVLTLF+D FRTD  DIA+DLRMTT++
Sbjct: 309  LPYTLHHRFTTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLT 368

Query: 1198 VRDHYKSLGCKFERDDKMLFVTLPVPLQFA 1287
            +R  ++ LGCK     K+ + TLP+PL F+
Sbjct: 369  LRPIFEHLGCKLISSQKVSYATLPIPLTFS 398


>ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
            gi|217073572|gb|ACJ85146.1| unknown [Medicago truncatula]
            gi|355484105|gb|AES65308.1| DNA-directed RNA polymerase I
            subunit rpa49 [Medicago truncatula]
            gi|388522465|gb|AFK49294.1| unknown [Medicago truncatula]
          Length = 428

 Score =  326 bits (836), Expect = 2e-86
 Identities = 178/390 (45%), Positives = 245/390 (62%), Gaps = 2/390 (0%)
 Frame = +1

Query: 124  LDVKMELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQNRLELVVSP 303
            +  K+E+V   P K+ P +GYF SGFDP KS +  +     V+VYRNK    R ELVVSP
Sbjct: 31   VQAKIEVVSSDPSKMPPFIGYFTSGFDPVKSSSGTD-----VQVYRNKVMHKRTELVVSP 85

Query: 304  KRSKVDFVGTNHSGEAAAA--KVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDY 477
              S V+FVGT++ GEA AA     TY LGV DKE+Q+LKIVPI  NKIFRLEPRV GV+Y
Sbjct: 86   AGSSVEFVGTSYEGEAVAAARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEPRVKGVEY 145

Query: 478  CXXXXXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESK 657
                          TA+  A K  +     GTKRS     +LA ++  EEP  +++L+ K
Sbjct: 146  KEPPPTPIKMVEEMTAEQLAEKKRNTDAALGTKRSNKMHSRLADMRGDEEPEAKKNLDEK 205

Query: 658  LKGVLINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPG 837
            +K V + + A+   +    R+IPP++++ATTP++AY LDKIIL  E +Y        +  
Sbjct: 206  MKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIILAEEWNYLQDIYYSLQKE 265

Query: 838  EEITASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSIDYANSAKDHT 1017
                 S YPSF+ NR ++L +I+D+ ++KK +CILS+I +L+ FKDQ S+D  +S+K   
Sbjct: 266  VAADFSLYPSFIRNRINRLKKIEDDSEKKKHSCILSFINYLVKFKDQHSMDGISSSKFEK 325

Query: 1018 VPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDLRMTTMS 1197
            +P  L+ +F  MF  +  R    EK NLLISYVLVLTLF+D FRTD  DIA+DLRMTT++
Sbjct: 326  LPYTLHHRFTTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLT 385

Query: 1198 VRDHYKSLGCKFERDDKMLFVTLPVPLQFA 1287
            +R  ++ LGCK     K+ + TLP+PL F+
Sbjct: 386  LRPIFEHLGCKLISSQKVSYATLPIPLTFS 415


>ref|XP_004306097.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Fragaria
            vesca subsp. vesca]
          Length = 410

 Score =  323 bits (827), Expect = 2e-85
 Identities = 186/396 (46%), Positives = 252/396 (63%), Gaps = 12/396 (3%)
 Frame = +1

Query: 136  MELVHEHPEKIAPVVGYFPSGFDPEKSRTSQEDDEVGVRVYRNKEKQN-RLELVVSP-KR 309
            ++++  + E++AP+VGYFPSGFDP+ + T        V V+R+KE+   RL+LVV+P K 
Sbjct: 20   IKVIRGNVERMAPLVGYFPSGFDPDLNSTK-------VGVFRHKERGGTRLQLVVTPEKE 72

Query: 310  SKVDFVGTNHSGEAAAAKVCTYALGVLDKETQSLKIVPITSNKIFRLEPRVVGVDYCXXX 489
             KVDFVGT+++GEA A + C+Y LGVLDK T +LKIVPI+SNK+FRLEP V GV      
Sbjct: 73   PKVDFVGTSYAGEAQAGEHCSYGLGVLDKATNTLKIVPISSNKVFRLEPNVQGVASSNKE 132

Query: 490  XXXXXXXXVNTAQDKANKMNDLTLLYGTKRSRNQAKKLASLKQKEEPNTQEDLESKLKGV 669
                    +  A +KA K+ +L   YGTK+S  Q KK+  LK  ++P+ Q+DL+   +G+
Sbjct: 133  LASSVVGKL-AAHEKAEKLTELHNRYGTKKSIRQNKKMQMLKHGDDPDAQKDLDVIKQGM 191

Query: 670  LINKEAMEIVDGSTGRNIPPHDTTATTPEKAYPLDKIILKGELDYXXXXXXXXKPGEEIT 849
             I ++ +E  +G   RN PP + +ATTP++AYPLDKII  GE  Y        + G  + 
Sbjct: 192  TIREDLIEASEGPKDRNTPPFNASATTPQEAYPLDKIIFTGEWKYLQDIHELLEGGSRL- 250

Query: 850  ASGYPSFVCNRAHKLLEIQDELQQKKLACILSYIAHLINFKDQRSI----------DYAN 999
                P FV NR HKL +I+ E ++ KLA ILSYI HLI FKD  SI          ++ +
Sbjct: 251  ----PQFVGNRIHKLQQIEVEDKKNKLASILSYIVHLIKFKDLHSIPIKAERSMEPEWLS 306

Query: 1000 SAKDHTVPGILYKKFVNMFTDSGRREQSAEKRNLLISYVLVLTLFADGFRTDPSDIARDL 1179
            SAK H  P I+  KF  MF D+  R  S EK NLLISYVLVLTLFAD F+T  +DIA+DL
Sbjct: 307  SAKAHRFPSIIRDKFSTMF-DAVSRTLSTEKSNLLISYVLVLTLFADEFQTSLTDIAKDL 365

Query: 1180 RMTTMSVRDHYKSLGCKFERDDKMLFVTLPVPLQFA 1287
            R+    +R HY++LGCK  + + +  VTLPVPLQF+
Sbjct: 366  RVCPSELRKHYQTLGCKVSKKNNLSMVTLPVPLQFS 401