BLASTX nr result
ID: Cocculus22_contig00004898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00004898
(1823 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65078.1| hypothetical protein VITISV_009543 [Vitis vinifera] 44 8e-11
ref|XP_004239374.1| PREDICTED: uncharacterized protein LOC101256... 42 1e-09
emb|CAN69142.1| hypothetical protein VITISV_039520 [Vitis vinifera] 47 5e-09
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,... 69 9e-09
ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263... 69 9e-09
emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera] 68 1e-08
gb|EXB50592.1| putative 19.0 kDa protein in cobS 5'region [Morus... 67 4e-08
ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containi... 67 4e-08
ref|XP_006433325.1| hypothetical protein CICLE_v10002196mg [Citr... 67 4e-08
ref|XP_002319537.1| hypothetical protein POPTR_0013s02180g [Popu... 66 5e-08
ref|XP_006841976.1| hypothetical protein AMTR_s00144p00047200 [A... 65 1e-07
emb|CAN63912.1| hypothetical protein VITISV_044222 [Vitis vinifera] 46 2e-07
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-07
ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-07
ref|XP_004307085.1| PREDICTED: uncharacterized protein LOC101298... 64 2e-07
emb|CAN63906.1| hypothetical protein VITISV_044216 [Vitis vinifera] 45 3e-07
emb|CCI55442.1| PH01B031C15.25 [Phyllostachys edulis] 36 4e-07
tpg|DAA64523.1| TPA_inf: DnaJ (chloroplast) [Oryza sativa Japoni... 63 4e-07
gb|EEC79178.1| hypothetical protein OsI_19873 [Oryza sativa Indi... 63 4e-07
gb|AAT07646.1| unknown protein [Oryza sativa Japonica Group] gi|... 63 4e-07
>emb|CAN65078.1| hypothetical protein VITISV_009543 [Vitis vinifera]
Length = 495
Score = 44.3 bits (103), Expect(4) = 8e-11
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 896 MTKVVTIAYDGHSMVRSNIMKMTDIASQSKNLDMKV 1003
M K +T+ YDGHS V +IMKM+D+ASQ K +DM +
Sbjct: 113 MIKQITMKYDGHSGVCEHIMKMSDMASQLKGMDMAI 148
Score = 35.4 bits (80), Expect(4) = 8e-11
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +1
Query: 1015 FDVLKATYNVQKEKWKLIEFTSISVQEE-----EQPNQA 1116
F K YN QK+KWK+ E + VQEE E+PN A
Sbjct: 165 FGPFKINYNTQKDKWKISELIVMYVQEEKRLKVEKPNMA 203
Score = 27.7 bits (60), Expect(4) = 8e-11
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 760 RSNHLSLIDIKANIPKYIRGVIPNELLTKDYSKA 861
R NH+SL+ +K +I IRG I N Y K+
Sbjct: 63 RFNHMSLMIMKGSITPAIRGAISNSNNAMSYIKS 96
Score = 26.6 bits (57), Expect(4) = 8e-11
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 597 VKALTRSNFLEWKDEIMFSLGLGELDLDLAFRLDEP 704
+ L+ +NF +WK++I LG +DL + L EP
Sbjct: 10 IAQLSGANFKKWKEQIGIVLGC----MDLHYALSEP 41
>ref|XP_004239374.1| PREDICTED: uncharacterized protein LOC101256184 [Solanum
lycopersicum]
Length = 524
Score = 41.6 bits (96), Expect(4) = 1e-09
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3
Query: 597 VKALTRSNFLEWKDEIMFSLGLGELDLDLAFRLDEP 704
+ L SNF EWK+++ +LG LDLDL FR+DEP
Sbjct: 291 IPELNGSNFREWKEQLQITLGC--LDLDLCFRIDEP 324
Score = 32.3 bits (72), Expect(4) = 1e-09
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 1015 FDVLKATYNVQKEKWKLIEFTSISVQEEEQ 1104
F K +YN KEKW + E + VQEEE+
Sbjct: 438 FGPFKISYNTNKEKWTMDELIVMCVQEEER 467
Score = 30.4 bits (67), Expect(4) = 1e-09
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 911 TIAYDGHSMVRSNIMKMTDIASQSKNLDMKVKVLILM 1021
T Y+G S VR +IM+M D+A Q ++DM + L+
Sbjct: 391 TKKYNGTSGVREHIMEMNDMAEQLISMDMTISESFLV 427
Score = 25.4 bits (54), Expect(4) = 1e-09
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 757 ERSNHLSLIDIKANIPKYIRGVIPNELLTKDY 852
E SN LSL+ +K+ I K I IP+ +++
Sbjct: 335 EHSNRLSLMIMKSKIAKNINKSIPDSTRAREF 366
>emb|CAN69142.1| hypothetical protein VITISV_039520 [Vitis vinifera]
Length = 687
Score = 46.6 bits (109), Expect(3) = 5e-09
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +2
Query: 896 MTKVVTIAYDGHSMVRSNIMKMTDIASQSKNLD 994
M K++T+ YDGHS VR +IMKM+D+ASQ K +D
Sbjct: 114 MIKMITMKYDGHSAVREHIMKMSDMASQLKGMD 146
Score = 31.6 bits (70), Expect(3) = 5e-09
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 573 GTIGSL*CVKALTRSNFLEWKDEIMFSLGLGELDLDLAFRLDEPPQATFFSGPKVK---K 743
G G L ++ L+ +NF +WK++I + L +DLD A R P + TF S + K +
Sbjct: 3 GPQGYLSGIEQLSGANFKKWKEQI--GIVLICMDLDYALREPTPTKPTFESTNEQKALYE 60
Query: 744 EWE 752
+WE
Sbjct: 61 KWE 63
Score = 30.4 bits (67), Expect(3) = 5e-09
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 757 ERSNHLSLIDIKANIPKYIRGVIPNELLTKDYSKA 861
ERSN +SL+ +K +I IRG IPN Y K+
Sbjct: 63 ERSNCMSLMIMKGSITPAIRGAIPNSDNAMSYIKS 97
>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 736
Score = 68.6 bits (166), Expect = 9e-09
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCV+TAPHAF++A+STGTARA SQGHG+DY
Sbjct: 626 GCPYSCVQTAPHAFAYASSTGTARAISQGHGEDY 659
>ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera]
gi|296088328|emb|CBI36773.3| unnamed protein product
[Vitis vinifera]
Length = 265
Score = 68.6 bits (166), Expect = 9e-09
Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 9/50 (18%)
Frame = +1
Query: 1699 CNAFSL---------PGCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
C AF L GCPYSCV APHAF+F +STGTARATSQGHG+DY
Sbjct: 139 CEAFDLFVNEVLCVGKGCPYSCVNKAPHAFTFVSSTGTARATSQGHGEDY 188
>emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]
Length = 322
Score = 68.2 bits (165), Expect = 1e-08
Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 9/50 (18%)
Frame = +1
Query: 1699 CNAFSL---------PGCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
C AF L GCPYSCV APHAF+F +STGTARATSQGHG+DY
Sbjct: 138 CEAFDLFVNEVLCVGNGCPYSCVNKAPHAFTFVSSTGTARATSQGHGEDY 187
>gb|EXB50592.1| putative 19.0 kDa protein in cobS 5'region [Morus notabilis]
Length = 258
Score = 66.6 bits (161), Expect = 4e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCV TAPHAF+F ASTGTARATSQGHG+DY
Sbjct: 149 GCPYSCVSTAPHAFTF-ASTGTARATSQGHGEDY 181
>ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like
[Citrus sinensis]
Length = 899
Score = 66.6 bits (161), Expect = 4e-08
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCVKTAP+AFS+++STGTARA SQGHG DY
Sbjct: 789 GCPYSCVKTAPNAFSYSSSTGTARAISQGHGQDY 822
>ref|XP_006433325.1| hypothetical protein CICLE_v10002196mg [Citrus clementina]
gi|557535447|gb|ESR46565.1| hypothetical protein
CICLE_v10002196mg [Citrus clementina]
Length = 262
Score = 66.6 bits (161), Expect = 4e-08
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCVKTAP+AFS+++STGTARA SQGHG DY
Sbjct: 152 GCPYSCVKTAPNAFSYSSSTGTARAISQGHGQDY 185
>ref|XP_002319537.1| hypothetical protein POPTR_0013s02180g [Populus trichocarpa]
gi|222857913|gb|EEE95460.1| hypothetical protein
POPTR_0013s02180g [Populus trichocarpa]
Length = 266
Score = 66.2 bits (160), Expect = 5e-08
Identities = 27/34 (79%), Positives = 33/34 (97%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCV+ AP+AF++A+STGTARATSQGHG+DY
Sbjct: 156 GCPYSCVQRAPYAFTYASSTGTARATSQGHGEDY 189
>ref|XP_006841976.1| hypothetical protein AMTR_s00144p00047200 [Amborella trichopoda]
gi|548844013|gb|ERN03651.1| hypothetical protein
AMTR_s00144p00047200 [Amborella trichopoda]
Length = 227
Score = 65.1 bits (157), Expect = 1e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCV+ APHAF+FA +TGTARAT Q HGDDY
Sbjct: 118 GCPYSCVRRAPHAFAFAPATGTARATLQAHGDDY 151
>emb|CAN63912.1| hypothetical protein VITISV_044222 [Vitis vinifera]
Length = 1100
Score = 46.2 bits (108), Expect(2) = 2e-07
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +2
Query: 896 MTKVVTIAYDGHSMVRSNIMKMTDIASQSKNLDMKV 1003
M K++T+ YDGHS VR +IMKM+D+ SQ K +DM +
Sbjct: 63 MIKMITMKYDGHSGVREHIMKMSDMDSQLKGMDMAI 98
Score = 38.1 bits (87), Expect(2) = 2e-07
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 1015 FDVLKATYNVQKEKWKLIEFTSISVQEE-----EQPNQARKVHYLDLKSVINNKNKKDN* 1179
F K YN QK+KWK+ E ++ VQEE E+P+ A L+ KS K
Sbjct: 115 FGPFKINYNTQKDKWKMSELIAMCVQEEERLKLEKPDMAHLTIGLNKKSFKKGKVDIPPN 174
Query: 1180 SWY 1188
SW+
Sbjct: 175 SWW 177
>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 833
Score = 64.3 bits (155), Expect = 2e-07
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +1
Query: 1687 FSFFCNAFSL--PGCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
F F N F GCPYSCV APH F+FA+STGTARA SQGH +DY
Sbjct: 710 FDVFVNEFLCVGKGCPYSCVDRAPHVFTFASSTGTARAMSQGHSEDY 756
>ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like
[Cucumis sativus]
Length = 838
Score = 64.3 bits (155), Expect = 2e-07
Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Frame = +1
Query: 1687 FSFFCNAFSL--PGCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
F F N F GCPYSCV APH F+FA+STGTARA SQGH +DY
Sbjct: 715 FDVFVNEFLCVGKGCPYSCVDRAPHVFTFASSTGTARAMSQGHSEDY 761
>ref|XP_004307085.1| PREDICTED: uncharacterized protein LOC101298165 [Fragaria vesca
subsp. vesca]
Length = 247
Score = 63.9 bits (154), Expect = 2e-07
Identities = 33/47 (70%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Frame = +1
Query: 1687 FSFFCN-AFSL-PGCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
F F N AF + GCPYSCV+ APHAF++A STGTARATSQGHG+DY
Sbjct: 125 FDVFVNEAFCVGKGCPYSCVQRAPHAFTYA-STGTARATSQGHGEDY 170
>emb|CAN63906.1| hypothetical protein VITISV_044216 [Vitis vinifera]
Length = 337
Score = 45.1 bits (105), Expect(2) = 3e-07
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +2
Query: 896 MTKVVTIAYDGHSMVRSNIMKMTDIASQSKNLDMKV 1003
M K++T+ Y+GHS VR +IMKM+D+AS+ K +DM +
Sbjct: 82 MIKMITMKYNGHSGVREHIMKMSDMASRLKEIDMAI 117
Score = 38.5 bits (88), Expect(2) = 3e-07
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 1015 FDVLKATYNVQKEKWKLIEFTSISVQEEEQPNQARKVHYLDLKSVINNKNKK 1170
F K YN QK+KWK+ E ++ VQEEE+ KV D+ + NKK
Sbjct: 134 FGPFKINYNTQKDKWKMSELIAMCVQEEEK----LKVEKPDMAHLTIGPNKK 181
>emb|CCI55442.1| PH01B031C15.25 [Phyllostachys edulis]
Length = 1126
Score = 35.8 bits (81), Expect(4) = 4e-07
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 902 KVVTIAYDGHSMVRSNIMKMTDIASQSKNLDMKV 1003
++++ YDG S +R +IM MTD+A + K +DM +
Sbjct: 204 RLLSTKYDGSSSIREHIMMMTDMAGKLKGMDMDI 237
Score = 35.4 bits (80), Expect(4) = 4e-07
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 597 VKALTRSNFLEWKDEIMFSLGLGELDLDLAFRLDEP 704
++ LT SNFL WK+ + S+ LG LDLD A R+ P
Sbjct: 93 IEQLTGSNFLAWKE--IISVVLGVLDLDYALRVTSP 126
Score = 26.6 bits (57), Expect(4) = 4e-07
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 763 SNHLSLIDIKANIPKYIRGVIPNELLTKDY 852
SN LSL+ +K +I I+G IP+ K+Y
Sbjct: 153 SNRLSLMIMKTSISVGIKGAIPDSENAKEY 182
Score = 23.1 bits (48), Expect(4) = 4e-07
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 1027 KATYNVQKEKWKLIEFTSI 1083
K YN QK+KW + + ++
Sbjct: 258 KINYNTQKDKWSISDLIAM 276
>tpg|DAA64523.1| TPA_inf: DnaJ (chloroplast) [Oryza sativa Japonica Group]
Length = 367
Score = 63.2 bits (152), Expect = 4e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCVK APHAF+FA TGTA A+SQGH DDY
Sbjct: 258 GCPYSCVKRAPHAFAFADDTGTAHASSQGHYDDY 291
>gb|EEC79178.1| hypothetical protein OsI_19873 [Oryza sativa Indica Group]
Length = 270
Score = 63.2 bits (152), Expect = 4e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCVK APHAF+FA TGTA A+SQGH DDY
Sbjct: 161 GCPYSCVKRAPHAFAFADDTGTAHASSQGHYDDY 194
>gb|AAT07646.1| unknown protein [Oryza sativa Japonica Group]
gi|222631510|gb|EEE63642.1| hypothetical protein
OsJ_18459 [Oryza sativa Japonica Group]
Length = 270
Score = 63.2 bits (152), Expect = 4e-07
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 1720 GCPYSCVKTAPHAFSFAASTGTARATSQGHGDDY 1821
GCPYSCVK APHAF+FA TGTA A+SQGH DDY
Sbjct: 161 GCPYSCVKRAPHAFAFADDTGTAHASSQGHYDDY 194