BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00004603
         (512 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]   157   3e-69
emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]   151   1e-67
emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]   151   1e-67
gb|AAP43919.1| integrase [Gossypium hirsutum]                         163   2e-67
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]   155   5e-67
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              157   6e-67
emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]   159   1e-66
gb|AAD17351.1| contains similarity to retrovirus-related polypro...   157   5e-66
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   162   2e-65
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   162   2e-65
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664...   155   5e-65
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   162   1e-64
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   162   2e-64
emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]   150   2e-64
gb|AAP43914.1| integrase [Gossypium raimondii]                        157   2e-64
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   162   2e-64
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756...   163   4e-64
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761...   163   4e-64
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]                161   4e-64
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         163   5e-64

>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
          Length = 1281

 Score =  157 bits (398), Expect(2) = 3e-69
 Identities = 77/100 (77%), Positives = 82/100 (82%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            WVDISMDFVLGLPRS+ G+ SIFVVVDRFSKM +FI CHK DDAT+IA+LFFREIVRLHG
Sbjct: 970  WVDISMDFVLGLPRSRNGRXSIFVVVDRFSKMTYFISCHKIDDATHIANLFFREIVRLHG 1029

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VPRSIVSDRDVKFLSYF             FSTTCHPQTD
Sbjct: 1030 VPRSIVSDRDVKFLSYFWKVLWRKLGTKLLFSTTCHPQTD 1069



 Score =  130 bits (326), Expect(2) = 3e-69
 Identities = 59/71 (83%), Positives = 64/71 (90%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            RELLVREAHGGGLMGHFGV+KTL+VL EHFFWPKMK DVER CARCIT R+AKS+ +PHG
Sbjct: 899  RELLVREAHGGGLMGHFGVRKTLDVLHEHFFWPKMKCDVERACARCITCRQAKSRVLPHG 958

Query: 181  LYTPLPVPCEP 213
            LYTPLPVP  P
Sbjct: 959  LYTPLPVPSAP 969


>emb|CAN81775.1| hypothetical protein VITISV_020071 [Vitis vinifera]
          Length = 1159

 Score =  151 bits (382), Expect(2) = 1e-67
 Identities = 75/100 (75%), Positives = 81/100 (81%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLPRS+ G++SIFVVVDRFSKM HFI CHK DDAT+IA+LFFREIVRLHG
Sbjct: 929  WFDISMDFVLGLPRSRNGRNSIFVVVDRFSKMRHFISCHKIDDATHIANLFFREIVRLHG 988

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VPRSIVSDRDVKFL+YF             F TT HPQTD
Sbjct: 989  VPRSIVSDRDVKFLNYFWKVLLXKLGTKLLFXTTXHPQTD 1028



 Score =  130 bits (328), Expect(2) = 1e-67
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = +1

Query: 4    ELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHGL 183
            ELLV +AHGGGLMGHFGV+KTLEVL EHFFWPKMKRDVER+C RCITYR+ KSK +PHGL
Sbjct: 859  ELLVCKAHGGGLMGHFGVRKTLEVLHEHFFWPKMKRDVERVCVRCITYRQTKSKVLPHGL 918

Query: 184  YTPLPVPCEP 213
            YTPLPVP  P
Sbjct: 919  YTPLPVPSAP 928


>emb|CAN81776.1| hypothetical protein VITISV_020072 [Vitis vinifera]
          Length = 366

 Score =  151 bits (382), Expect(2) = 1e-67
 Identities = 75/100 (75%), Positives = 81/100 (81%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           W DISMDFVLGLPRS+ G++SIFVVVDRFSKM HFI CHK DDAT+IA+LFFREIVRLHG
Sbjct: 234 WFDISMDFVLGLPRSRNGRNSIFVVVDRFSKMRHFISCHKIDDATHIANLFFREIVRLHG 293

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           VPRSIVSDRDVKFL+YF             F TT HPQTD
Sbjct: 294 VPRSIVSDRDVKFLNYFWKVLLXKLGTKLLFXTTXHPQTD 333



 Score =  130 bits (328), Expect(2) = 1e-67
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = +1

Query: 4   ELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHGL 183
           ELLV +AHGGGLMGHFGV+KTLEVL EHFFWPKMKRDVER+C RCITYR+ KSK +PHGL
Sbjct: 164 ELLVCKAHGGGLMGHFGVRKTLEVLHEHFFWPKMKRDVERVCVRCITYRQTKSKVLPHGL 223

Query: 184 YTPLPVPCEP 213
           YTPLPVP  P
Sbjct: 224 YTPLPVPSAP 233


>gb|AAP43919.1| integrase [Gossypium hirsutum]
          Length = 334

 Score =  163 bits (413), Expect(2) = 2e-67
 Identities = 73/100 (73%), Positives = 87/100 (87%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           WVD+SMDF+LGLPR+KKG+DSIFVVVDRFSKM+HFIPCHKTDDAT++ADLFF+E+VRLHG
Sbjct: 234 WVDLSMDFILGLPRTKKGRDSIFVVVDRFSKMSHFIPCHKTDDATHVADLFFKEVVRLHG 293

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           +P++IVSDRDVKFLS+F             +STTCHPQTD
Sbjct: 294 IPKTIVSDRDVKFLSHFWKVLWGKLGTKLLYSTTCHPQTD 333



 Score =  118 bits (296), Expect(2) = 2e-67
 Identities = 50/71 (70%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           RELL+ EAH GGLMGHFGV KTL++LQEHF WP MK+DVE++C++CIT ++AKSK M HG
Sbjct: 163 RELLIHEAHSGGLMGHFGVAKTLDILQEHFHWPHMKKDVEKVCSKCITCKQAKSKVMLHG 222

Query: 181 LYTPLPVPCEP 213
           LYTPLP+P  P
Sbjct: 223 LYTPLPIPTSP 233


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score =  155 bits (393), Expect(2) = 5e-67
 Identities = 76/100 (76%), Positives = 82/100 (82%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            WVDISMDFVLGL RS+ G+DSIFVVVDRFSKM HFI CHKTDDAT+IA+LFFR+IVRLHG
Sbjct: 856  WVDISMDFVLGLLRSRNGRDSIFVVVDRFSKMTHFISCHKTDDATHIANLFFRKIVRLHG 915

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            +PRSIVSDRDVKFLS F             FSTTCHPQTD
Sbjct: 916  IPRSIVSDRDVKFLSCFWKVLWGKLGTKLLFSTTCHPQTD 955



 Score =  124 bits (312), Expect(2) = 5e-67
 Identities = 58/71 (81%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           RELLVREAH GGLMGHFGV+KTL+VL EH FWPKMKRDVER CARCITYR AKSK +PHG
Sbjct: 785 RELLVREAHEGGLMGHFGVRKTLDVLHEHIFWPKMKRDVERACARCITYRHAKSKVLPHG 844

Query: 181 LYTPLPVPCEP 213
           LYT L VP  P
Sbjct: 845 LYTTLLVPSAP 855


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  157 bits (398), Expect(2) = 6e-67
 Identities = 74/100 (74%), Positives = 83/100 (83%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFV+GLPR++ GKDSIFVVVDRFSKMAHFIPCHKTDDA +IA+LFFRE+VRLHG
Sbjct: 1455 WNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHG 1514

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            +P++IVSDRD KFLSYF             FSTTCHPQTD
Sbjct: 1515 MPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTD 1554



 Score =  122 bits (306), Expect(2) = 6e-67
 Identities = 52/71 (73%), Positives = 61/71 (85%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            REL +REAHGGGLMGHFGV KT++V+Q+HF WP MKRDVERIC RC T ++AK+KS PHG
Sbjct: 1384 RELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKSQPHG 1443

Query: 181  LYTPLPVPCEP 213
            LYTPLP+P  P
Sbjct: 1444 LYTPLPIPSHP 1454


>emb|CAN80356.1| hypothetical protein VITISV_003506 [Vitis vinifera]
          Length = 960

 Score =  159 bits (403), Expect(2) = 1e-66
 Identities = 78/101 (77%), Positives = 84/101 (83%)
 Frame = +3

Query: 210  AWVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLH 389
            +WVDISMDFVLGLPRS+ G+DSIFVVVDRFSKMAHFI CHK DDAT+IA+LFFREIVRLH
Sbjct: 716  SWVDISMDFVLGLPRSRNGRDSIFVVVDRFSKMAHFISCHKADDATHIANLFFREIVRLH 775

Query: 390  GVPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            GVPRSIVSD+DVKFLSYF             FSTTC PQTD
Sbjct: 776  GVPRSIVSDQDVKFLSYFWKVFWRKLGTKLLFSTTCPPQTD 816



 Score =  119 bits (299), Expect(2) = 1e-66
 Identities = 54/66 (81%), Positives = 60/66 (90%)
 Frame = +1

Query: 4   ELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHGL 183
           ELLV EAHGGGLMGHFGV++TL+VL EHFFWPKMKRDVER CARCITYR+AKS+ +PH L
Sbjct: 647 ELLVHEAHGGGLMGHFGVRRTLDVLYEHFFWPKMKRDVERACARCITYRQAKSRVLPHRL 706

Query: 184 YTPLPV 201
           YTPL V
Sbjct: 707 YTPLLV 712


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
            zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
            E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
            putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  157 bits (398), Expect(2) = 5e-66
 Identities = 74/100 (74%), Positives = 83/100 (83%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFV+GLPR++ GKDSIFVVVDRFSKMAHFIPCHKTDDA +IA+LFFRE+VRLHG
Sbjct: 830  WNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAMHIANLFFREVVRLHG 889

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            +P++IVSDRD KFLSYF             FSTTCHPQTD
Sbjct: 890  MPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTD 929



 Score =  119 bits (298), Expect(2) = 5e-66
 Identities = 51/71 (71%), Positives = 60/71 (84%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           REL +REAHGGGLMGHFGV KTL+V+Q+HF WP MKRDVER+C RC T ++AK+KS PHG
Sbjct: 759 RELFIREAHGGGLMGHFGVSKTLKVMQDHFHWPHMKRDVERMCERCTTCKQAKAKSQPHG 818

Query: 181 LYTPLPVPCEP 213
           L TPLP+P  P
Sbjct: 819 LCTPLPIPLHP 829


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  162 bits (411), Expect(2) = 2e-65
 Identities = 77/100 (77%), Positives = 84/100 (84%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHK+DDAT++ADLFFREIVRLHG
Sbjct: 1292 WEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHG 1351

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VP +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 1352 VPNTIVSDRDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTD 1391



 Score =  112 bits (280), Expect(2) = 2e-65
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            R LL++EAHGGGLMGHFGV+KT ++L +HFFWPKM+RDVER  ARC T +KAKS+  PHG
Sbjct: 1221 RMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHG 1280

Query: 181  LYTPLPVPCEP 213
            LY PLPVP  P
Sbjct: 1281 LYMPLPVPSVP 1291


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 889

 Score =  162 bits (411), Expect(2) = 2e-65
 Identities = 77/100 (77%), Positives = 84/100 (84%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           W DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHK+DDAT++ADLFFREIVRLHG
Sbjct: 605 WEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHG 664

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           VP +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 665 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTD 704



 Score =  112 bits (280), Expect(2) = 2e-65
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           R LL++EAHGGGLMGHFGV+KT ++L +HFFWPKM+RDVER  ARC T +KAKS+  PHG
Sbjct: 534 RMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKSRLNPHG 593

Query: 181 LYTPLPVPCEP 213
           LY PLPVP  P
Sbjct: 594 LYMPLPVPSVP 604


>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
          Length = 1176

 Score =  155 bits (393), Expect(2) = 5e-65
 Identities = 73/100 (73%), Positives = 81/100 (81%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLP++K GKDS+FVVVDRFSKMAHFIPC K DDA ++ADLFF+EIVRLHG
Sbjct: 861  WTDISMDFVLGLPKTKNGKDSVFVVVDRFSKMAHFIPCKKVDDACHVADLFFKEIVRLHG 920

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            +PRSIVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 921  LPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTD 960



 Score =  118 bits (295), Expect(2) = 5e-65
 Identities = 54/74 (72%), Positives = 60/74 (81%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            RELLV E+H GGLMGHFGVQKTLE+LQEHFFWP M+RDV + C  CI  ++AKSK  PHG
Sbjct: 790  RELLVSESHEGGLMGHFGVQKTLEILQEHFFWPHMRRDVHKFCGHCIVCKQAKSKVKPHG 849

Query: 181  LYTPLPVPCEPGWT 222
            LYTPLPVP  P WT
Sbjct: 850  LYTPLPVPEYP-WT 862


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  162 bits (411), Expect(2) = 1e-64
 Identities = 77/100 (77%), Positives = 84/100 (84%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHK+DDAT++ADLFFREIVRLHG
Sbjct: 1292 WEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHG 1351

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VP +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 1352 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTD 1391



 Score =  110 bits (274), Expect(2) = 1e-64
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            R LL++EAHGGGLMGHFGV+KT ++L +HFFWPKM+RDVER  ARC T +KAK +  PHG
Sbjct: 1221 RMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKAKLRLNPHG 1280

Query: 181  LYTPLPVPCEP 213
            LY PLPVP  P
Sbjct: 1281 LYMPLPVPSVP 1291


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  162 bits (410), Expect(2) = 2e-64
 Identities = 76/100 (76%), Positives = 83/100 (83%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHK+DDA N+ADLFFREI+RLHG
Sbjct: 1308 WEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHG 1367

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VP +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 1368 VPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTD 1407



 Score =  109 bits (273), Expect(2) = 2e-64
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            R LL++EAHGGGLMGHFGV+KT ++L  HFFWPKM+RDVER  ARC T ++AKS+  PHG
Sbjct: 1237 RLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHG 1296

Query: 181  LYTPLPVPCEP 213
            LY PLPVP  P
Sbjct: 1297 LYMPLPVPSVP 1307


>emb|CAN84067.1| hypothetical protein VITISV_041979 [Vitis vinifera]
          Length = 364

 Score =  150 bits (379), Expect(2) = 2e-64
 Identities = 73/100 (73%), Positives = 81/100 (81%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           WV+I MDFVLGLPRS+ G+DSIFVVVDRFSKM HFI CHKT+DAT+IA+LFFREIV L+G
Sbjct: 234 WVNIYMDFVLGLPRSRNGRDSIFVVVDRFSKMTHFISCHKTNDATHIANLFFREIVWLYG 293

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           VP+SIVSDRDVKFL YF             FSTTCHPQTD
Sbjct: 294 VPKSIVSDRDVKFLRYFWKVLWRKLGTKLLFSTTCHPQTD 333



 Score =  121 bits (304), Expect(2) = 2e-64
 Identities = 55/70 (78%), Positives = 60/70 (85%)
 Frame = +1

Query: 4   ELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHGL 183
           ELLVREAHGG  MGHFGV+KTL+VL EHFFWPKMKRDVER CARCIT R+ KS+ +PHGL
Sbjct: 164 ELLVREAHGGDXMGHFGVRKTLDVLHEHFFWPKMKRDVERACARCITCRRTKSRVLPHGL 223

Query: 184 YTPLPVPCEP 213
           YT LPVP  P
Sbjct: 224 YTLLPVPSAP 233


>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score =  157 bits (397), Expect(2) = 2e-64
 Identities = 72/100 (72%), Positives = 83/100 (83%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           W DIS+DFV+GLP +K G+DSIFVVVDRFSKMAHFIPCHKTDDAT++ADLFFRE+VRLHG
Sbjct: 234 WTDISIDFVIGLPITKHGRDSIFVVVDRFSKMAHFIPCHKTDDATHVADLFFREVVRLHG 293

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           +PR+IVSDRD KFLS+F             +STTCHPQTD
Sbjct: 294 IPRTIVSDRDAKFLSHFWKVLWGKLGTKLLYSTTCHPQTD 333



 Score =  114 bits (286), Expect(2) = 2e-64
 Identities = 52/74 (70%), Positives = 60/74 (81%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           RELLVREAH GGLMGHFGV KT +VL EHF+WP M++ VE+IC+ CIT ++ KS  MPHG
Sbjct: 163 RELLVREAHSGGLMGHFGVTKTYDVLHEHFYWPNMRKLVEKICSTCITCKQDKSTVMPHG 222

Query: 181 LYTPLPVPCEPGWT 222
           LYTPLPVP  P WT
Sbjct: 223 LYTPLPVPSSP-WT 235


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  162 bits (411), Expect(2) = 2e-64
 Identities = 77/100 (77%), Positives = 84/100 (84%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHK+DDAT++ADLFFREIVRLHG
Sbjct: 1188 WEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHG 1247

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VP +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 1248 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTD 1287



 Score =  108 bits (271), Expect(2) = 2e-64
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = +1

Query: 7    LLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHGLY 186
            LL++EAHGGGLMGHFGV+KT ++L +H FWPKM+RDVER  ARC T +KAKS+  PHGLY
Sbjct: 1119 LLLQEAHGGGLMGHFGVKKTEDILADHLFWPKMRRDVERFVARCTTCQKAKSRLNPHGLY 1178

Query: 187  TPLPVPCEP 213
             PLPVP  P
Sbjct: 1179 MPLPVPSVP 1187


>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
           italica]
          Length = 763

 Score =  163 bits (413), Expect(2) = 4e-64
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           W+DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHKTDDA+N+A+LFFREI+RLHG
Sbjct: 552 WLDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHG 611

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           +P +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 612 IPNTIVSDRDAKFLSHFWRSLWNKMGTKLLFSTTCHPQTD 651



 Score =  107 bits (267), Expect(2) = 4e-64
 Identities = 49/71 (69%), Positives = 56/71 (78%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           R LL++EAHGGGLMGHFGV KT EVL  HFFWP+M+ DVER+ ARC T +KAKS+   HG
Sbjct: 481 RRLLLQEAHGGGLMGHFGVYKTHEVLAAHFFWPRMRADVERLVARCTTCQKAKSRLNNHG 540

Query: 181 LYTPLPVPCEP 213
           LY PLPVP  P
Sbjct: 541 LYMPLPVPTSP 551


>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
           italica]
          Length = 738

 Score =  163 bits (413), Expect(2) = 4e-64
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           W+DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHKTDDA+N+A+LFFREI+RLHG
Sbjct: 527 WLDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHG 586

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           +P +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 587 IPNTIVSDRDAKFLSHFWRSLWNKMGTKLLFSTTCHPQTD 626



 Score =  107 bits (267), Expect(2) = 4e-64
 Identities = 49/71 (69%), Positives = 56/71 (78%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           R LL++EAHGGGLMGHFGV KT EVL  HFFWP+M+ DVER+ ARC T +KAKS+   HG
Sbjct: 456 RRLLLQEAHGGGLMGHFGVYKTHEVLAAHFFWPRMRADVERLVARCTTCQKAKSRLNNHG 515

Query: 181 LYTPLPVPCEP 213
           LY PLPVP  P
Sbjct: 516 LYMPLPVPTSP 526


>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
          Length = 227

 Score =  161 bits (407), Expect(2) = 4e-64
 Identities = 76/100 (76%), Positives = 83/100 (83%)
 Frame = +3

Query: 213 WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
           W DISMDFVLGLPR+KKG+DSIFVVVDRFSKMAHFIPCHK+DDATNIADLFFRE++RLHG
Sbjct: 80  WEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATNIADLFFREVIRLHG 139

Query: 393 VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
           VP +IVSDRD KF S+F             FSTTCHPQTD
Sbjct: 140 VPTTIVSDRDAKFPSHFWRTLWAKLGTKLLFSTTCHPQTD 179



 Score =  109 bits (273), Expect(2) = 4e-64
 Identities = 49/71 (69%), Positives = 57/71 (80%)
 Frame = +1

Query: 1   RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
           R LL++EAHGGGLMGHFG +KT ++L  HFFWPKM+RDVER  ARC T +KAKS+  PHG
Sbjct: 9   RLLLLQEAHGGGLMGHFGAKKTEDILASHFFWPKMRRDVERFVARCTTCQKAKSRLNPHG 68

Query: 181 LYTPLPVPCEP 213
           LY PLPVP  P
Sbjct: 69  LYMPLPVPSVP 79


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  163 bits (412), Expect(2) = 5e-64
 Identities = 77/100 (77%), Positives = 84/100 (84%)
 Frame = +3

Query: 213  WVDISMDFVLGLPRSKKGKDSIFVVVDRFSKMAHFIPCHKTDDATNIADLFFREIVRLHG 392
            W DISMDFVLGLPR++KG+DS+FVVVDRFSKMAHFIPCHKTDDAT+IADLFFREIVRLHG
Sbjct: 1267 WEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHG 1326

Query: 393  VPRSIVSDRDVKFLSYFXXXXXXXXXXXXXFSTTCHPQTD 512
            VP +IVSDRD KFLS+F             FSTTCHPQTD
Sbjct: 1327 VPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTD 1366



 Score =  107 bits (267), Expect(2) = 5e-64
 Identities = 48/71 (67%), Positives = 57/71 (80%)
 Frame = +1

Query: 1    RELLVREAHGGGLMGHFGVQKTLEVLQEHFFWPKMKRDVERICARCITYRKAKSKSMPHG 180
            R LL++EAHGGGLMGHFG +KT ++L  HFFWPKM+RDV R+ ARC T +KAKS+  PHG
Sbjct: 1196 RLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRLNPHG 1255

Query: 181  LYTPLPVPCEP 213
            LY PLPVP  P
Sbjct: 1256 LYLPLPVPSAP 1266