BLASTX nr result
ID: Cocculus22_contig00004602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00004602
(410 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 211 9e-53
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 202 4e-50
emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera] 201 7e-50
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 196 3e-48
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 189 5e-46
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 189 5e-46
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 187 1e-45
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 187 1e-45
emb|CAN79544.1| hypothetical protein VITISV_025323 [Vitis vinifera] 180 2e-43
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 180 2e-43
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 180 2e-43
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 178 8e-43
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 178 8e-43
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 177 1e-42
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 177 1e-42
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 176 2e-42
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 176 2e-42
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 176 3e-42
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 176 3e-42
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 176 4e-42
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 211 bits (537), Expect = 9e-53
Identities = 97/136 (71%), Positives = 111/136 (81%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FWK LW KLGTKLLFSTTCHPQTDGQTEVVNRT++TLLR +IQKNLK+WEE
Sbjct: 257 DRDAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRAIIQKNLKTWEE 316
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNR VHS T FSPFEIVYGFN IDER S+DGK+KAE V+QLH
Sbjct: 317 CLPHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLLPLPIDERASMDGKKKAEFVKQLH 376
Query: 361 EKVKIQIEKKNDQYAS 408
E+ + IEK+ +QYA+
Sbjct: 377 ERTRQHIEKRTEQYAT 392
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 202 bits (514), Expect = 4e-50
Identities = 92/135 (68%), Positives = 111/135 (82%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLSYFWK LW+KLGTKLLFSTTCHPQTDGQTEVVNRT++TLLR +I+KNLK+WE+
Sbjct: 1522 DRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWED 1581
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYN ++HS + FSPF+IVYGFN + ERVSLDGK+KAE+V+Q+H
Sbjct: 1582 CLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIH 1641
Query: 361 EKVKIQIEKKNDQYA 405
E+ K IE+K QYA
Sbjct: 1642 EQAKKNIEEKTKQYA 1656
>emb|CAN83237.1| hypothetical protein VITISV_029623 [Vitis vinifera]
Length = 1124
Score = 201 bits (512), Expect = 7e-50
Identities = 93/129 (72%), Positives = 110/129 (85%)
Frame = +1
Query: 22 SYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEECLPFIEF 201
SYFWKVLW KLGTKLLFSTTCHPQ DGQTEVVNRT++TLLRT+IQKNLK+WE CLPFIEF
Sbjct: 878 SYFWKVLWQKLGTKLLFSTTCHPQMDGQTEVVNRTLSTLLRTIIQKNLKNWENCLPFIEF 937
Query: 202 AYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLHEKVKIQI 381
AYN++VHSTTNFSPFEIV+GFN I+E +SLDG++K EMV++LHE V+ I
Sbjct: 938 AYNQSVHSTTNFSPFEIVHGFNPLTPLDLLPLPINEMISLDGEKKVEMVKKLHESVQKHI 997
Query: 382 EKKNDQYAS 408
E+KN+QYA+
Sbjct: 998 ERKNEQYAT 1006
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 196 bits (498), Expect = 3e-48
Identities = 87/135 (64%), Positives = 108/135 (80%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW++LW KLGTKLL+ST CHPQTDGQTEVVNRT+T LLR VI+KNLKSWEE
Sbjct: 1054 DRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNRTLTQLLRVVIRKNLKSWEE 1113
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
LP++EFAYNRA+HSTTN SPFE+ YGFN ++++ +D +KA+ +R+ H
Sbjct: 1114 SLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQGIREFH 1173
Query: 361 EKVKIQIEKKNDQYA 405
KV+ QIEKKN+QYA
Sbjct: 1174 SKVRAQIEKKNEQYA 1188
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 189 bits (479), Expect = 5e-46
Identities = 86/136 (63%), Positives = 104/136 (76%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLSYFWK LWAKLGT+LLFSTTCHPQTDGQTEVVNRT++ LLR +I+KNLK WEE
Sbjct: 1334 DRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEE 1393
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNRAVHSTTN PFE+VYGF + ER ++ ++A V+++H
Sbjct: 1394 CLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIH 1453
Query: 361 EKVKIQIEKKNDQYAS 408
EK K IEK++ YA+
Sbjct: 1454 EKTKEAIEKRSKYYAA 1469
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 189 bits (479), Expect = 5e-46
Identities = 86/136 (63%), Positives = 104/136 (76%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLSYFWK LWAKLGT+LLFSTTCHPQTDGQTEVVNRT++ LLR +I+KNLK WEE
Sbjct: 302 DRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEE 361
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNRAVHSTTN PFE+VYGF + ER ++ ++A V+++H
Sbjct: 362 CLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIH 421
Query: 361 EKVKIQIEKKNDQYAS 408
EK K IEK++ YA+
Sbjct: 422 EKTKEAIEKRSKYYAA 437
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 187 bits (476), Expect = 1e-45
Identities = 86/136 (63%), Positives = 103/136 (75%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLSYFWK LWAKLGT+LLFSTTCHPQTDGQTEVVNRT++ LLR +I+KNLK WEE
Sbjct: 302 DRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEE 361
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNRAVHSTTN PFE+VYGF + ER ++ + A V+++H
Sbjct: 362 CLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASKHATYVKKIH 421
Query: 361 EKVKIQIEKKNDQYAS 408
EK K IEK++ YA+
Sbjct: 422 EKTKEAIEKRSKYYAA 437
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 187 bits (475), Expect = 1e-45
Identities = 92/136 (67%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LW K+GTKLLFSTTCHPQTDGQTEVVN+T+ TLLRTV++KNLKSWE
Sbjct: 387 DRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLKKNLKSWEA 446
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFN-XXXXXXXXXXXIDERVSLDGKRKAEMVRQL 357
CLP +EFAYNR VHSTTN SPFEIVYGFN I D + KAE V++L
Sbjct: 447 CLPHVEFAYNRTVHSTTNCSPFEIVYGFNPLTPLDLLPMPNITMFKHKDAQAKAEYVKKL 506
Query: 358 HEKVKIQIEKKNDQYA 405
HE+VK QIEKKN YA
Sbjct: 507 HEQVKAQIEKKNASYA 522
>emb|CAN79544.1| hypothetical protein VITISV_025323 [Vitis vinifera]
Length = 384
Score = 180 bits (457), Expect = 2e-43
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRDVKF SYFWK LW KLGTKLLFSTTCHPQ D QTEVVN T++TLLR +I+KN+K+WEE
Sbjct: 216 DRDVKFFSYFWKTLWCKLGTKLLFSTTCHPQIDRQTEVVNMTLSTLLRAIIKKNIKTWEE 275
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CL +EFAYN ++S T FSPFEIVYGFN + E +LDGK+ + + Q+H
Sbjct: 276 CLSHVEFAYNCTIYSATKFSPFEIVYGFNPLTPLDLRTLPLFEHANLDGKKNTKFIMQIH 335
Query: 361 EKVKIQIEKKNDQY 402
EKV++ IEK+ + Y
Sbjct: 336 EKVRLNIEKRMEHY 349
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 180 bits (456), Expect = 2e-43
Identities = 84/121 (69%), Positives = 98/121 (80%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRDVKFLS FWKVLW KLGTKLLFSTTCHPQTDGQ EVVNRT++TLLRT+IQKNLK+WE+
Sbjct: 923 DRDVKFLSCFWKVLWGKLGTKLLFSTTCHPQTDGQIEVVNRTLSTLLRTIIQKNLKNWED 982
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLPF EFAYNR+VHSTT+FSPFEIVYGFN ++E SLD K+ + V + +
Sbjct: 983 CLPFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLDEKKNEQYVTKAN 1042
Query: 361 E 363
+
Sbjct: 1043 K 1043
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 180 bits (456), Expect = 2e-43
Identities = 82/136 (60%), Positives = 102/136 (75%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRDVKF+SYFWK LWAKLGTKLLFSTTCH Q DGQ EVVNRT++ LLR +I+KNLK WE+
Sbjct: 933 DRDVKFMSYFWKTLWAKLGTKLLFSTTCHSQIDGQMEVVNRTLSMLLRMMIKKNLKEWED 992
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNR VHSTT SPFE+VYGFN + ER +++ ++A+ V+++H
Sbjct: 993 CLPHVEFAYNRVVHSTTQLSPFEVVYGFNPITPLDLLPLPLQERANMEATKRADYVKKMH 1052
Query: 361 EKVKIQIEKKNDQYAS 408
EK K IE+ YA+
Sbjct: 1053 EKTKETIERIIQSYAA 1068
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 178 bits (451), Expect = 8e-43
Identities = 81/134 (60%), Positives = 102/134 (76%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WEE
Sbjct: 1331 DRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1390
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP IEFAYNR++HSTT PF+IVYG E+++ D K++AE++ +LH
Sbjct: 1391 CLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLH 1450
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1451 ETTKENIERMNAKY 1464
Score = 89.0 bits (219), Expect = 6e-16
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DR+ +F S+FWK L +LGT+L FST HPQTDGQTE +N+ + +L + K+W++
Sbjct: 2153 DRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDK 2212
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAE-MVRQL 357
LP+ EF+YN + ++ +P+E +YG + D R+AE VR +
Sbjct: 2213 SLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQVFGTDILREAEAKVRTI 2272
Query: 358 HEKVKIQIEKKNDQYA 405
+ +K+ + + YA
Sbjct: 2273 WDNLKV-AQSRQKSYA 2287
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 178 bits (451), Expect = 8e-43
Identities = 82/134 (61%), Positives = 101/134 (75%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNR+++T+LR V++ NLK WEE
Sbjct: 1387 DRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEE 1446
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP IEFAYNR++HSTT PFEIVYGF E+V+ D K +AE++ ++H
Sbjct: 1447 CLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMH 1506
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1507 ELTKENIERMNARY 1520
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 177 bits (450), Expect = 1e-42
Identities = 83/134 (61%), Positives = 100/134 (74%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WEE
Sbjct: 1359 DRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNR+ HSTT PFEIVYG ERV+ D K +AE++ +LH
Sbjct: 1419 CLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLH 1478
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1479 ETTKENIERMNIKY 1492
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 177 bits (450), Expect = 1e-42
Identities = 81/134 (60%), Positives = 101/134 (75%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNR+++T+LR V++ N+K WEE
Sbjct: 1390 DRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEE 1449
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP IEFAYNR++HSTT PFEIVYGF E+V+ D K +AE++ ++H
Sbjct: 1450 CLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMH 1509
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1510 ELTKENIERMNARY 1523
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 176 bits (447), Expect = 2e-42
Identities = 83/134 (61%), Positives = 99/134 (73%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WEE
Sbjct: 1359 DRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNR+ HSTT PFEIVYG ERV+ D K AE++ +LH
Sbjct: 1419 CLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLH 1478
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1479 ETTKENIERMNIKY 1492
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 176 bits (447), Expect = 2e-42
Identities = 82/134 (61%), Positives = 99/134 (73%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WEE
Sbjct: 672 DRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 731
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYN + HSTT PFEIVYG ERV+ D K +AE++ +LH
Sbjct: 732 CLPHVEFAYNHSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELMLKLH 791
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 792 ETTKENIERMNIKY 805
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 176 bits (446), Expect = 3e-42
Identities = 80/134 (59%), Positives = 101/134 (75%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WE+
Sbjct: 1334 DRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWED 1393
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP IEFAYNR++HSTT PF+IVYG E+++ D R+AE++ +LH
Sbjct: 1394 CLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLH 1453
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1454 ETTKENIERMNARY 1467
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 176 bits (446), Expect = 3e-42
Identities = 82/134 (61%), Positives = 99/134 (73%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTK LFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WEE
Sbjct: 1359 DRDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNR+ HSTT PFEIVYG ERV+ D K +AE++ +LH
Sbjct: 1419 CLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELMLKLH 1478
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1479 ETTKENIERMNIKY 1492
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 176 bits (445), Expect = 4e-42
Identities = 83/134 (61%), Positives = 100/134 (74%)
Frame = +1
Query: 1 DRDVKFLSYFWKVLWAKLGTKLLFSTTCHPQTDGQTEVVNRTMTTLLRTVIQKNLKSWEE 180
DRD KFLS+FW+ LWAKLGTKLLFSTTCHPQTDGQTEVVNRT++T+LR V++KN+K WEE
Sbjct: 1255 DRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEE 1314
Query: 181 CLPFIEFAYNRAVHSTTNFSPFEIVYGFNXXXXXXXXXXXIDERVSLDGKRKAEMVRQLH 360
CLP +EFAYNR+ HSTT PFEIVYG ERV+ D K +AE++ +LH
Sbjct: 1315 CLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELMLKLH 1374
Query: 361 EKVKIQIEKKNDQY 402
E K IE+ N +Y
Sbjct: 1375 ETTKENIERMNIKY 1388