BLASTX nr result
ID: Cocculus22_contig00004577
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00004577 (1799 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29879.3| unnamed protein product [Vitis vinifera] 753 0.0 ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 744 0.0 ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 707 0.0 ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 694 0.0 ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 694 0.0 emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 691 0.0 ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 681 0.0 gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus... 678 0.0 ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 678 0.0 ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 674 0.0 ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 656 0.0 ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 645 0.0 ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub... 642 0.0 ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 639 0.0 ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 639 0.0 ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 634 e-179 gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 631 e-178 ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 627 e-177 ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab... 619 e-174 ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 615 e-173 >emb|CBI29879.3| unnamed protein product [Vitis vinifera] Length = 1669 Score = 753 bits (1945), Expect = 0.0 Identities = 383/605 (63%), Positives = 467/605 (77%), Gaps = 6/605 (0%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQK CFFCHHF+ LV+K SQLELI KGDVVGAKN+DS SPSE+ ++D +V+ Sbjct: 99 LLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVS 158 Query: 183 -DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTF 359 +T +S + HL+Q WTS+Q EAMS++D F+K K + CK C K+P +T PTF Sbjct: 159 CSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTF 218 Query: 360 GWIYTS-MPNKSIRENVILGSKLKQPYLGENNVDSDDVESSGAVYDEMSDSATKTYKKSK 536 GW + + + + R NVI GSKL++P N VD+D+ SS A D + D+ TK ++ Sbjct: 219 GWFHMAGLSDAQTRANVIRGSKLERPL---NGVDTDETHSSIAPTDGIQDTVTKRLERKG 275 Query: 537 GSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSM 716 + KQ F GPL P+E +D ++ LW+NE LCS IS+I Q+ L N+ +SM Sbjct: 276 AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 335 Query: 717 FFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNNS---RVAPRWM 887 FF+E ++VPPIKFRPPSKG SVMEHPQT LL +VLQ N++LGNAH NNS ++ RWM Sbjct: 336 FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 395 Query: 888 ELQQSVNVLFGNKKSTSQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPY 1064 +LQQS+NVLF K + Q + + G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPY Sbjct: 396 DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 455 Query: 1065 LAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPLSR 1244 LAVNEIGIPPYFALRLTYPE+VTPWNV KLR+AIINGPE+HPGAT +DK + KL +++ Sbjct: 456 LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 515 Query: 1245 KSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHV 1424 K R SISRKLPSSRGVV QPG+S ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHV Sbjct: 516 KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 575 Query: 1425 VRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGD 1604 VRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQYI+P+ GD Sbjct: 576 VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 635 Query: 1605 TKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSINTED 1784 RGLIQDHIVSAVLLTK+DTFLT E YN LLY+SG+S+ + G IGK G+ VS +++ED Sbjct: 636 PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGS-GSFIGKPGKKVSVLDSED 694 Query: 1785 GIQYL 1799 +Q L Sbjct: 695 EMQPL 699 >ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis vinifera] Length = 1740 Score = 744 bits (1921), Expect = 0.0 Identities = 382/624 (61%), Positives = 468/624 (75%), Gaps = 25/624 (4%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQK CFFCHHF+ LV+K SQLELI KGDVVGAKN+DS SPSE+ ++D +V+ Sbjct: 148 LLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVS 207 Query: 183 -DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTF 359 +T +S + HL+Q WTS+Q EAMS++D F+K K + CK C K+P +T PTF Sbjct: 208 CSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTF 267 Query: 360 GWIYTS-MPNKSIRENVILGSKLKQP-------------------YLGENNVDSDDVESS 479 GW + + + + R NVI GSKL++P + + VD+D+ SS Sbjct: 268 GWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSS 327 Query: 480 GAVYDEMSDSATKTYKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLI 659 A D + D+ TK ++ + KQ F GPL P+E +D ++ LW+NE LCS I Sbjct: 328 IAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFI 387 Query: 660 SNIQQDELCMPENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLS 839 S+I Q+ L N+ +SMFF+E ++VPPIKFRPPSKG SVMEHPQT LL +VLQ N++ Sbjct: 388 SDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIA 447 Query: 840 LGNAHMNNS---RVAPRWMELQQSVNVLFGNKKSTSQ-RDNAGTGICQLLEKKEGIFRQK 1007 LGNAH NNS ++ RWM+LQQS+NVLF K + Q + + G+GICQLLEKKEG+FRQK Sbjct: 448 LGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQK 507 Query: 1008 LMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVH 1187 +MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNV KLR+AIINGPE+H Sbjct: 508 MMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIH 567 Query: 1188 PGATLCIDKSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGD 1367 PGAT +DK + KL +++K R SISRKLPSSRGVV QPG+S ++E EGK+VYRHLQDGD Sbjct: 568 PGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGD 627 Query: 1368 VVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRA 1547 +VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRA Sbjct: 628 IVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRA 687 Query: 1548 EALNIVNANNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAA 1727 EA NIVNANNQYI+P+ GD RGLIQDHIVSAVLLTK+DTFLT E YN LLY+SG+S+ + Sbjct: 688 EAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGS 747 Query: 1728 RGGSIGKFGQNVSSINTEDGIQYL 1799 G IGK G+ VS +++ED +Q L Sbjct: 748 -GSFIGKPGKKVSVLDSEDEMQPL 770 >ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] Length = 1686 Score = 707 bits (1825), Expect = 0.0 Identities = 368/605 (60%), Positives = 452/605 (74%), Gaps = 6/605 (0%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQ+ CF C HFR + VEKC QLELI+KGD+VGAK ++S SPSEAL E+D + + Sbjct: 102 LLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAKRLESVSPSEALYPEESDLSHES 161 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 T HS + + +H Q WTS+Q EAMS+L+ F+K K K CK C NP+IT PTFG Sbjct: 162 CPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFG 221 Query: 363 WIYTS-MPNKSIRENVILGSKLKQPYLGENNVDSDDVESSGAVYDEMSDSATKTYKKSKG 539 W +TS M + SIR NVI G +L LG + DVE + D+ S TK +KK + Sbjct: 222 WFHTSGMSDASIRANVITGHQLGG-LLGSEIEGTTDVEDAAEPGDQ--HSGTKKHKKKER 278 Query: 540 SLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSMF 719 + + ++Q L P+E K++++LLW+NE R+CS IS++QQ E + + +MF Sbjct: 279 KEVLEFTRQKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEF--GKRKAGPAMF 336 Query: 720 FIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMN--NSRVAPRWMEL 893 F+E ++VPPIKFRPP+KGG SVMEHPQT LLS+VLQ N+SLG+AH+N +S++ RW++L Sbjct: 337 FLETILVPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINKEHSKIVRRWLDL 396 Query: 894 QQSVNVLFGNK--KSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYL 1067 QQS+N LF +K K QR+ A GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPY+ Sbjct: 397 QQSINTLFDSKTAKGPGQREGA-PGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYI 455 Query: 1068 AVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPLSRK 1247 VNEIGIPP FA++LTYPERVTPWN+ KLRNA+ING E HPGAT +DK + KLP +RK Sbjct: 456 GVNEIGIPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARK 515 Query: 1248 SRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 1427 +R SISRKLPSSRG V Q GK E E EGK+VYRHLQDGDVVLVNRQPTLHKPSIMAHVV Sbjct: 516 ARISISRKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVV 575 Query: 1428 RVLKGEKTIRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGD 1604 RVLKGEKT+RMHYANCS TYNADFDGDEMNVHFPQDE+SRAEA NIVNANNQ++ P++G+ Sbjct: 576 RVLKGEKTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGE 635 Query: 1605 TKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSINTED 1784 RGLIQDHIVSAVLLTK+DTFL+ +++N LLY+SGVS G+ GQ V +ED Sbjct: 636 PLRGLIQDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSED 695 Query: 1785 GIQYL 1799 IQ L Sbjct: 696 EIQTL 700 >ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] Length = 1689 Score = 694 bits (1791), Expect = 0.0 Identities = 367/615 (59%), Positives = 446/615 (72%), Gaps = 19/615 (3%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQ+ CFFC+HFR E VE+C SQL+LI GD+VGAK +DS S + S N+ + Sbjct: 99 LLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQES 158 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 + H+ ++ ++ WTS+Q EAMS+L+ F+K K CK C KNP+IT P FG Sbjct: 159 GSIVHN------SEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFG 212 Query: 363 WIYTS-MPNKSIRENVILGSKLKQPY---LGENNVDSDDVESSGAVYD--EM-------- 500 W++ + M +RENVI G K+ + G D+DDV SSG D EM Sbjct: 213 WLHMNGMLGAQMRENVIRGCKMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFT 272 Query: 501 -SDSATKTYKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQD 677 S+ +K K + + KQ GPL P+E K KLLW+NE LCS+IS+IQQ Sbjct: 273 GSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQ 332 Query: 678 ELCMPENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHM 857 + +SMFF+E ++VPPIKFR P+KGG SVMEHPQT LLS+VLQ N+SLGNA+ Sbjct: 333 GF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYT 389 Query: 858 NNSR----VAPRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRV 1025 NN + V WM+LQQSVN+LF +K + SQ + +GICQLLEKKEG+FRQK+MGKRV Sbjct: 390 NNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRV 449 Query: 1026 NYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLC 1205 N+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV KLR AIING E HPGAT Sbjct: 450 NFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHY 509 Query: 1206 IDKSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNR 1385 +DK + +LP S+K+R SISRKLPSSRG + QPGK+L++E EGK+V RHLQDGDVVLVNR Sbjct: 510 VDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNR 569 Query: 1386 QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIV 1565 QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIV Sbjct: 570 QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIV 629 Query: 1566 NANNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIG 1745 NANNQY+ P++G+ R LIQDHIVSAVLLTKRDTFL+ +++N LLY+SGVS+ A+ G Sbjct: 630 NANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSG 689 Query: 1746 KFGQNVSSINTEDGI 1790 K GQ V +E+G+ Sbjct: 690 KPGQKVFVSTSEEGM 704 >ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao] gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao] Length = 1665 Score = 694 bits (1791), Expect = 0.0 Identities = 367/615 (59%), Positives = 446/615 (72%), Gaps = 19/615 (3%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQ+ CFFC+HFR E VE+C SQL+LI GD+VGAK +DS S + S N+ + Sbjct: 99 LLQRICFFCYHFRAEKTEVERCVSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQES 158 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 + H+ ++ ++ WTS+Q EAMS+L+ F+K K CK C KNP+IT P FG Sbjct: 159 GSIVHN------SEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFG 212 Query: 363 WIYTS-MPNKSIRENVILGSKLKQPY---LGENNVDSDDVESSGAVYD--EM-------- 500 W++ + M +RENVI G K+ + G D+DDV SSG D EM Sbjct: 213 WLHMNGMLGAQMRENVIRGCKMVDTFSDEAGSGLEDADDVSSSGNGVDIAEMDTSEIGFT 272 Query: 501 -SDSATKTYKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQD 677 S+ +K K + + KQ GPL P+E K KLLW+NE LCS+IS+IQQ Sbjct: 273 GSEGNGAKARKKKAQVPLEFMKQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQ 332 Query: 678 ELCMPENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHM 857 + +SMFF+E ++VPPIKFR P+KGG SVMEHPQT LLS+VLQ N+SLGNA+ Sbjct: 333 GF---GKKVGYSMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYT 389 Query: 858 NNSR----VAPRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRV 1025 NN + V WM+LQQSVN+LF +K + SQ + +GICQLLEKKEG+FRQK+MGKRV Sbjct: 390 NNLQSSKAVVRLWMDLQQSVNLLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRV 449 Query: 1026 NYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLC 1205 N+ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV KLR AIING E HPGAT Sbjct: 450 NFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHY 509 Query: 1206 IDKSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNR 1385 +DK + +LP S+K+R SISRKLPSSRG + QPGK+L++E EGK+V RHLQDGDVVLVNR Sbjct: 510 VDKLSTKRLPPSQKARISISRKLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNR 569 Query: 1386 QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIV 1565 QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIV Sbjct: 570 QPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIV 629 Query: 1566 NANNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIG 1745 NANNQY+ P++G+ R LIQDHIVSAVLLTKRDTFL+ +++N LLY+SGVS+ A+ G Sbjct: 630 NANNQYVRPSNGEPIRALIQDHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSG 689 Query: 1746 KFGQNVSSINTEDGI 1790 K GQ V +E+G+ Sbjct: 690 KPGQKVFVSTSEEGM 704 >emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] Length = 1350 Score = 691 bits (1782), Expect = 0.0 Identities = 370/652 (56%), Positives = 454/652 (69%), Gaps = 71/652 (10%) Frame = +3 Query: 57 VEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN-DATCHSRMHGFETKHLE 233 V+K SQLELI KGDVVGAKN+DS SPSE+ ++D +V+ +T +S + HL+ Sbjct: 186 VQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLK 245 Query: 234 QHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFGWIY-TSMPNKSIRENVI 410 Q WTS+Q EAMS++D F+K K + CK C K+P +T PTFGW + + + R NVI Sbjct: 246 QQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVI 305 Query: 411 LGSKLKQP-------------------YLGENNVDSDDVESSGAVYDEMSDSATKTYKKS 533 GSKL++P + + VD+D+ SS A D + D+ TK ++ Sbjct: 306 RGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKXLERK 365 Query: 534 KGSLLTKVSKQTKFSPGPLWP----------------------------TETKDRIKLLW 629 + KQ F GPL P T+ +D ++ LW Sbjct: 366 GAQAPIEFIKQKSFFSGPLLPSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLW 425 Query: 630 QNENRLCSLISNIQQDELCMPENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTL 809 +NE LCS IS+I Q+ L N+ +SMFF+E ++VPPIKFRPPSKG SVMEHPQT L Sbjct: 426 ENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVL 485 Query: 810 LSQVLQCNLSLGNAHMNN---SRVAPRWMELQQSVNVLFGNKKSTSQ-RDNAGTGICQLL 977 L +VLQ N++LGNAH NN S++ RWM+LQQS+NVLF K + Q + + G+GICQLL Sbjct: 486 LGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLL 545 Query: 978 EKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLR 1157 EKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNV KLR Sbjct: 546 EKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLR 605 Query: 1158 NAIINGPEVHPGATLCIDKSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGK 1337 +AIINGPE+HPGAT +DK + KL +++K R SISRKLPSSRGVV QPG+S ++E EGK Sbjct: 606 DAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGK 665 Query: 1338 VVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANC-------------- 1475 +VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVLKGEKT+RMHYANC Sbjct: 666 IVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDD 725 Query: 1476 ----STYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQDHIVSA 1643 STYNADFDGDEMNVHFPQDEISRAEA NIVNANNQYI+P+ GD RGLIQDHIVSA Sbjct: 726 CSDSSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSA 785 Query: 1644 VLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSINTEDGIQYL 1799 VLLTK+DTFLT E YN LLY+SG+S+ + G IGK G+ VS +++ED +Q L Sbjct: 786 VLLTKKDTFLTREQYNQLLYSSGLSSGS-GSFIGKPGKKVSVLDSEDEMQPL 836 >ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus sinensis] Length = 1715 Score = 681 bits (1757), Expect = 0.0 Identities = 351/611 (57%), Positives = 441/611 (72%), Gaps = 15/611 (2%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LL++ CFFCHHF+ VEKC +LELIIKGD++ AK++D PSE+ ++D N + Sbjct: 99 LLKRICFFCHHFKASRREVEKCVRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKS 158 Query: 183 DATCHSRMHGFET-KHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTF 359 + + ++ ++L+ WTS+Q EA L F+K + C C KNP I+ PTF Sbjct: 159 SCSMVTPRGNYDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTF 218 Query: 360 GWIYTS-MPNKSIRENVILGSKLKQPYLG---------ENNVDSDDVESSGAVYDEMSDS 509 GWI+ + MP+ IR N+I G L + + G ++VD+ + S + D+ Sbjct: 219 GWIHMNGMPHADIRANLIRGCNLGETFSGGEEEKDLGASSDVDAPETHSFNGTFPGTQDT 278 Query: 510 ATKTYKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCM 689 A + ++K G++ + KQ GPL P++ KD I+ LW+NE LCS IS++QQ Sbjct: 279 AARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF-- 336 Query: 690 PENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMN--- 860 + HS+FF+ A++VPPIKFR PSKGG SVMEHPQT LLS+VLQ N+ L NA++N Sbjct: 337 -GKKAGHSIFFLGAVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPD 395 Query: 861 NSRV-APRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYAC 1037 N+++ RWM LQQSVNVLF K + QRD A +GICQLLEKKEG+FRQKLMGKRVNYAC Sbjct: 396 NAKIIVTRWMNLQQSVNVLFDGKNAAGQRDMA-SGICQLLEKKEGLFRQKLMGKRVNYAC 454 Query: 1038 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKS 1217 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV KLR++IING E+HPGAT +DK Sbjct: 455 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKL 514 Query: 1218 TKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTL 1397 + +LP ++K R SI+RKL +SRG +VQPGK ++E EGK+VYRHLQDGDVVLVNRQPTL Sbjct: 515 STMRLPPNKKMRISIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDGDVVLVNRQPTL 574 Query: 1398 HKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANN 1577 HKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA NIVNANN Sbjct: 575 HKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANN 634 Query: 1578 QYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQ 1757 QY+ P++GD R LIQDHIVSA LLTK+DTFL +++ LLY+SGVS++ G GK GQ Sbjct: 635 QYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQ 694 Query: 1758 NVSSINTEDGI 1790 V +E + Sbjct: 695 RVLISRSEQEV 705 >gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis] Length = 1770 Score = 678 bits (1750), Expect = 0.0 Identities = 349/597 (58%), Positives = 438/597 (73%), Gaps = 10/597 (1%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 +L++ CF C+HFR V+KC SQLELI+KGDV AK+++S SE+ ++ Sbjct: 41 ILKRTCFSCYHFRRNPVEVKKCVSQLELILKGDVARAKDLNSRPSSESSHLKDYGYRGSK 100 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 D + K Q TS+Q EAMS+L+ F+K C+ C +IT P FG Sbjct: 101 DRSA---------KPSTQPKLTSLQLSEAMSVLNNFLKPNHTKCRNCEAHRLTITQPVFG 151 Query: 363 WIYTS-MPNKSIRENVILGSKLKQPYLGENNVDSDDVESSGAVYDEMSDS-----ATKTY 524 W+ + R NVI SKL+ P+ ++ +++ + D +D+ +TK++ Sbjct: 152 WLNMERISGARARANVIRNSKLEGPFSDGESLPEEEIINDVTSPDSDADTDTPATSTKSH 211 Query: 525 KKSKGSLLTKVSKQTK-FSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENR 701 + G + + KQT+ FS GP+ P++ K+ I+LLW+NE LC+ I++IQ + N+ Sbjct: 212 RSKGGKVPREYLKQTETFSGGPMLPSDVKEMIRLLWENEIELCTYITDIQHQGI---GNK 268 Query: 702 GNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNN---SRV 872 +HSMFF+E ++VPPIKFRPPSKGG SVMEHP T LL++VLQ N+ LGNAH+N +++ Sbjct: 269 ADHSMFFLETILVPPIKFRPPSKGGDSVMEHPHTVLLNKVLQANIELGNAHVNKLEYTKI 328 Query: 873 APRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVIS 1052 RWM+LQQSVNV+F +K ST QR N GICQLLEKKEGIFRQK+MGKRVN+ACRSVIS Sbjct: 329 VRRWMDLQQSVNVMFDSKTSTGQR-NVAPGICQLLEKKEGIFRQKMMGKRVNFACRSVIS 387 Query: 1053 PDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKL 1232 PDPYLAVNEIGIPPYFALRLTYPERVTPWNV KLR+AIINGPE HPGAT +DK + KL Sbjct: 388 PDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDAIINGPETHPGATHYVDKLSTVKL 447 Query: 1233 PLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSI 1412 PL+RK+R S SRKLPSSRGVV+Q GK+ ++E EGK+V+RHLQDGD+VLVNRQPTLHKPSI Sbjct: 448 PLNRKARISASRKLPSSRGVVMQNGKTYDYESEGKIVHRHLQDGDIVLVNRQPTLHKPSI 507 Query: 1413 MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIP 1592 MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVH PQDEISRAE NI+NANNQY+ P Sbjct: 508 MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHLPQDEISRAEGYNILNANNQYVKP 567 Query: 1593 TSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNV 1763 TSG+ R LIQDHI+SAVLLTK+DTFL W+++NHLLY++G+S + G S KFG V Sbjct: 568 TSGEPIRALIQDHIISAVLLTKKDTFLRWDEFNHLLYSTGLSNSGSGASSRKFGNKV 624 >ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina] gi|557523327|gb|ESR34694.1| hypothetical protein CICLE_v10004132mg [Citrus clementina] Length = 1715 Score = 678 bits (1750), Expect = 0.0 Identities = 351/611 (57%), Positives = 439/611 (71%), Gaps = 15/611 (2%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LL++ CFFCHHF+ VEKC +LELIIKGD++ AK++D PSE+ ++D N + Sbjct: 99 LLKRICFFCHHFKASRREVEKCVRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKS 158 Query: 183 DATCHSRMHGFET-KHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTF 359 + + ++ ++L+ WTS+Q EA L F+K + C C KNP I+ PTF Sbjct: 159 SCSMVTPRGNYDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTF 218 Query: 360 GWIYTS-MPNKSIRENVILGSKLKQPYLG---------ENNVDSDDVESSGAVYDEMSDS 509 GWI+ + MP+ IR N+I G L + + G ++VD+ + S + D+ Sbjct: 219 GWIHMNGMPHADIRANLIRGCNLGETFSGGEEEKDLGTSSDVDAPETHSFNGAFPGTQDT 278 Query: 510 ATKTYKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCM 689 A + ++K G++ + KQ GPL P++ KD I+ LW+NE LCS IS++QQ Sbjct: 279 AARRHQKGSGAVPSGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF-- 336 Query: 690 PENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMN--- 860 + HS+FF+ ++VPPIKFR PSKGG SVMEHPQT LLS+VLQ N+ L NA++N Sbjct: 337 -GKKAGHSIFFLGVVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPD 395 Query: 861 NSRV-APRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYAC 1037 N++V RWM LQQSVNVLF K + QRD A +GICQLLEKKEG+FRQKLMGKRVNYAC Sbjct: 396 NAKVIVARWMNLQQSVNVLFDGKNAAGQRDVA-SGICQLLEKKEGLFRQKLMGKRVNYAC 454 Query: 1038 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKS 1217 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV KLR++IING E+HPGAT +DK Sbjct: 455 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKL 514 Query: 1218 TKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTL 1397 + +LP ++K R SI RKL +SRG +VQPGK ++E EGK+VYRHLQDGDVVLVNRQPTL Sbjct: 515 STMRLPPNKKMRISIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDGDVVLVNRQPTL 574 Query: 1398 HKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANN 1577 HKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA NIVNANN Sbjct: 575 HKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANN 634 Query: 1578 QYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQ 1757 QY+ P++GD R LIQDHIVSA LLTK+DTFL +++ LLY+SGVS++ G GK GQ Sbjct: 635 QYVRPSNGDPLRSLIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQ 694 Query: 1758 NVSSINTEDGI 1790 V +E + Sbjct: 695 RVLISRSEQEV 705 >ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine max] Length = 1651 Score = 674 bits (1740), Expect = 0.0 Identities = 354/603 (58%), Positives = 439/603 (72%), Gaps = 10/603 (1%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLS-RENDSVNV 179 +LQ+ CF CHHFR + V+ +SQLELI+KGD++ AK ++S P +++ S ++S++ Sbjct: 99 ILQRTCFTCHHFRAPSKEVDIRTSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHP 158 Query: 180 NDATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTF 359 D + + L ++ WTS+Q EAMS+L + +K K C++CG KNP I+ PTF Sbjct: 159 GDG---DESQCYSAEQLGEN-WTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTF 214 Query: 360 GWIYTSMPNKSIRENVILGSKLKQPYLG--ENNVDSDDVESSGA----VYDEMSDSATKT 521 GW + NV+ + + + E+ +DD+ G V D S K Sbjct: 215 GWFHM---------NVLSADETRADTIRSVESETTNDDISLGGGDTTDVEDITSAGTAKR 265 Query: 522 YKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENR 701 K+ K L K+++Q K S G L P++ K ++LLW+NE RLCS I++IQ + Sbjct: 266 DKRKKEKLSYKLAEQNKLS-GSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKK 321 Query: 702 GNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNNS---RV 872 HSMFF+E + VPPIKFRPP+KGG +VMEHPQT LL++VLQCN+SLG+AH+N S +V Sbjct: 322 AGHSMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKV 381 Query: 873 APRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVIS 1052 RWM+LQQSVN+LF NK ++ +RD A TGICQLLEKKEGIFRQK+MGKRVN+ACRSVIS Sbjct: 382 LSRWMDLQQSVNMLFDNKTASGKRDVA-TGICQLLEKKEGIFRQKMMGKRVNFACRSVIS 440 Query: 1053 PDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKL 1232 PDPYLAVNEIGIPPYFALRL+YPERVTPWNV KLRNAI+NGPE HPGAT DK + KL Sbjct: 441 PDPYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKL 500 Query: 1233 PLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSI 1412 P K + SRKLP+SRGV++ GK +HE EGKVVYRHL+DGDVVLVNRQPTLHKPSI Sbjct: 501 PPKGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSI 560 Query: 1413 MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIP 1592 MAH+VRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ P Sbjct: 561 MAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKP 620 Query: 1593 TSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSI 1772 TSGD R LIQDHIVSA LLTK+DTFL++E++N LLY+SGVS A G GK GQ V Sbjct: 621 TSGDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFIS 680 Query: 1773 NTE 1781 N+E Sbjct: 681 NSE 683 >ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris] gi|561018822|gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris] Length = 1637 Score = 656 bits (1693), Expect = 0.0 Identities = 351/603 (58%), Positives = 427/603 (70%), Gaps = 10/603 (1%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 +LQ+ CF CHHF + VE +SQ ELI+KGD++ AK++DS ++ Sbjct: 99 ILQRTCFSCHHFHASRKEVEMRTSQFELIMKGDIIRAKSLDSI---------------IS 143 Query: 183 DATCHSRMHGFETKHLEQ--HSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPT 356 D + HS G E++ +EQ +W+S+Q EAMS+L F+ RK K C+ CG+ NP I+ PT Sbjct: 144 DESNHSG-DGDESQGVEQLGENWSSLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPT 202 Query: 357 FGWIYTS-MPNKSIRENVILGSKLKQPYLGENNVDSDDVESSGAVYDEMSD----SATKT 521 FGW + + + + R N + E+ +DD+ G E D K Sbjct: 203 FGWFHMNVLSDDEARANTMRAL--------ESETINDDMSLGGGETTEEEDITSTGTAKR 254 Query: 522 YKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENR 701 K+ KG L +K++ Q K S G L P++ K ++LLW+NE RLCS IS+IQ + Sbjct: 255 DKRKKGKLSSKLAAQNKLS-GSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKK 310 Query: 702 GNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNN---SRV 872 HSMFF+E + VPPIKFRPP+KGG VMEHPQT LL++VLQ N+SLG+AH+N S+V Sbjct: 311 AGHSMFFLENIFVPPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKV 370 Query: 873 APRWMELQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVIS 1052 RWM+LQQSVN+LF NK TS + GICQLLEKKEGIFRQK+MGKRVN+ACRSVIS Sbjct: 371 LSRWMDLQQSVNLLFDNK--TSGQGEVAAGICQLLEKKEGIFRQKMMGKRVNFACRSVIS 428 Query: 1053 PDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKL 1232 PDPYLAVNEIGIPPYFALRL+YPERVTPWNVT LRNAI+NGP+ HPGAT D+ KL Sbjct: 429 PDPYLAVNEIGIPPYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKL 488 Query: 1233 PLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSI 1412 P + K + ISRKLPSSRGV++ GK + E EGK+VYRHL+DGDVVLVNRQPTLHKPSI Sbjct: 489 PPNGKLLSFISRKLPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSI 548 Query: 1413 MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIP 1592 MAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ P Sbjct: 549 MAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKP 608 Query: 1593 TSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSI 1772 TSGD R LIQDHIVSA LLTK+DTF+T+E + LLY+SGVS G GK GQ V Sbjct: 609 TSGDPIRALIQDHIVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMT 668 Query: 1773 NTE 1781 N+E Sbjct: 669 NSE 671 >ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer arietinum] Length = 1650 Score = 645 bits (1665), Expect = 0.0 Identities = 342/597 (57%), Positives = 423/597 (70%), Gaps = 4/597 (0%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 +L++ CF CHHF+ VE ++QLELI+KG++ AKN+D+ + E+ D + N Sbjct: 99 VLRRTCFSCHHFQASRNEVELRANQLELIMKGNIAKAKNLDAINLDESA-----DLSDGN 153 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 D+ C S E +WTS+Q EAMS+L F+K++ + C+ CG NP IT PTFG Sbjct: 154 DSQCSSDEQLGE-------NWTSLQFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFG 206 Query: 363 WIYT-SMPNKSIRENVILGSKLKQPYLGENNVDSDDVESSGAVYDEMSDSATKTYKKSKG 539 W + ++ R NVI G + + DD+ ++ D + S Sbjct: 207 WFHVKALSAAQARANVISGIDASLA----SEIIHDDISLGNGDTTDVEDITSGDTANSNA 262 Query: 540 SLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSMF 719 K+++ K S G L P++ + ++LLW+NE RLC IS+IQ + HSMF Sbjct: 263 KRQNKLARHNKLS-GSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMF 318 Query: 720 FIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNNSR---VAPRWME 890 F++ + VPPIKFRPP+KG V EH QT LL++VL+ N+SLG AH+N S V RWM+ Sbjct: 319 FLDNIYVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMD 378 Query: 891 LQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLA 1070 LQ+SVN+LF NK ++ Q+D TGICQLLEKKEGIFRQK+MGKRVNYACRSVISPDPYLA Sbjct: 379 LQRSVNLLFDNKTASGQKDLV-TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLA 437 Query: 1071 VNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPLSRKS 1250 VNEIGIPPYFALRLTYPERVTPWNV +LRNAI+NGPE HPGATL DK++ KLPL R+S Sbjct: 438 VNEIGIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRS 497 Query: 1251 RNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 1430 R+ SRKL SSRGV++ GK ++E EGKVVYRHL+DGDVVLVNRQPTLHKPSIMAHVVR Sbjct: 498 RSLTSRKLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVR 557 Query: 1431 VLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTK 1610 VLKGEKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ PTSGD Sbjct: 558 VLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPI 617 Query: 1611 RGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSINTE 1781 R LIQDHIVSA LLTK+DTFL+ E++N LLY+SGVS G GK GQ + N++ Sbjct: 618 RALIQDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSD 674 >ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer arietinum] Length = 1660 Score = 642 bits (1655), Expect = 0.0 Identities = 347/605 (57%), Positives = 432/605 (71%), Gaps = 12/605 (1%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 +L++ CF CHHF+ + VE ++QLELI+KG++ AKN+D E L D + + Sbjct: 99 VLRRTCFSCHHFQASRKEVELRANQLELIMKGNIAKAKNLD-----EINLDESADLCDGD 153 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 D+ C S E +WTS+Q EAMS+L F+K++ + C+ CG NP IT PTFG Sbjct: 154 DSQCSSAEQLGE-------NWTSLQFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFG 206 Query: 363 WIYT-SMPNKSIRENVILG------SKLKQPYLGENNVDSDDVESSGAVYDEMSDSATKT 521 W + ++ R NVI G S++ + N D+ DVE + ++++S K Sbjct: 207 WFHVKALSAAQARANVISGNDVSLASEIIHDDISLGNGDTTDVEDITS--GDIANSNAKR 264 Query: 522 YKKSKGSLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENR 701 + K K ++S T G L P++ + ++LLW+N+ RLC IS+IQ + + Sbjct: 265 HNKEK-----QISSHTL--AGSLLPSQVQRILELLWENDARLCLYISDIQGLGI---GKK 314 Query: 702 GNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNNSR---V 872 HSMFF+E + VPPIKFRPP+KG V EH QT LL++VL+ N+SLG AH+N S V Sbjct: 315 AGHSMFFLENIYVPPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVV 374 Query: 873 APRWMELQQSVNVLFGNKKST--SQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSV 1046 RWM+LQ+SVN+LF NK ++ SQ+D TGICQLLEKKEGIFRQK+MGKRVNYACRSV Sbjct: 375 LRRWMDLQRSVNLLFDNKTASGESQKDLV-TGICQLLEKKEGIFRQKMMGKRVNYACRSV 433 Query: 1047 ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKT 1226 ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNV +LRNAI+NGPE HPGATL DK++ Sbjct: 434 ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTL 493 Query: 1227 KLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKP 1406 KLPL R+SR+ SR+L SSRGV++ GK ++E EGKVVYRHL+DGDVVLVNRQPTLHKP Sbjct: 494 KLPLDRRSRSLTSRRLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKP 553 Query: 1407 SIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYI 1586 SIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA NIVNANNQY+ Sbjct: 554 SIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYV 613 Query: 1587 IPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVS 1766 PTSGD R LIQDHIVSA LLTK+DTFL+ E++N LLY+SGVS G GK GQ + Sbjct: 614 KPTSGDPIRALIQDHIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIF 673 Query: 1767 SINTE 1781 N++ Sbjct: 674 MSNSD 678 >ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis sativus] Length = 1652 Score = 639 bits (1649), Expect = 0.0 Identities = 344/596 (57%), Positives = 422/596 (70%), Gaps = 10/596 (1%) Frame = +3 Query: 18 CFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVNDATCH 197 CF CHHFR +VE C + LELI+ G++ AK + E + +N T Sbjct: 110 CFSCHHFRAGESMVENCKTLLELILDGEIAKAKEL------------EEEWMNSKSRTKS 157 Query: 198 SR-MHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFGWIYT 374 S M+ +E K+ + +WTS+Q EA+S++ F+K K+ +CK CG K+P IT PTFGW + Sbjct: 158 SHSMYTYERKNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHM 217 Query: 375 S-MPNKSIRENVILGSKLKQPYLGENNVDSDDVESSG-AVYDEMSDSATKTYKKSKGSLL 548 + R N I SK G V S + E++ A ++ D + + + Sbjct: 218 KGLAGVQKRANAIRRSKPVSVSSGAEGVSSLEEETTTEATVEDFEDVSPEVFM------- 270 Query: 549 TKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSMFFIE 728 Q FS G L P+E KD +K LW+NE LCS IS+I Q N+ HSMFF+E Sbjct: 271 -----QKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLE 322 Query: 729 ALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMN---NSRVAPRWMELQQ 899 +++VPPIKFRPP+KGG SVMEHPQT LL++VLQ N+SLGN H N +S++ WM+LQQ Sbjct: 323 SVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQ 382 Query: 900 SVNVLFGNKKSTSQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVN 1076 S+N+LF +K + +++A GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVN Sbjct: 383 SINILFDSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVN 442 Query: 1077 EIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPL--SRKS 1250 EIGIPPYFALRLTYPERVT WNV KLRNAIINGPE HPGAT IDK KL L SRKS Sbjct: 443 EIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKS 502 Query: 1251 RNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 1430 R SISRKLPSSRGVVV G ++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVR Sbjct: 503 RISISRKLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVR 561 Query: 1431 VLKGEKTIRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDT 1607 VLKGEKTIRMHYANCS TYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY+ PTSG+ Sbjct: 562 VLKGEKTIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEP 621 Query: 1608 KRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSIN 1775 R LIQDHI+SAVLLTK+DTFL +++++ LLY+SG+S + S K GQ + +++ Sbjct: 622 IRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLD 677 >ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis sativus] Length = 1650 Score = 639 bits (1649), Expect = 0.0 Identities = 344/596 (57%), Positives = 422/596 (70%), Gaps = 10/596 (1%) Frame = +3 Query: 18 CFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVNDATCH 197 CF CHHFR +VE C + LELI+ G++ AK + E + +N T Sbjct: 104 CFSCHHFRAGESMVENCKTLLELILDGEIAKAKEL------------EEEWMNSKSRTKS 151 Query: 198 SR-MHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFGWIYT 374 S M+ +E K+ + +WTS+Q EA+S++ F+K K+ +CK CG K+P IT PTFGW + Sbjct: 152 SHSMYTYERKNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHM 211 Query: 375 S-MPNKSIRENVILGSKLKQPYLGENNVDSDDVESSG-AVYDEMSDSATKTYKKSKGSLL 548 + R N I SK G V S + E++ A ++ D + + + Sbjct: 212 KGLAGVQKRANAIRRSKPVSVSSGAEGVSSLEEETTTEATVEDFEDVSPEVFM------- 264 Query: 549 TKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSMFFIE 728 Q FS G L P+E KD +K LW+NE LCS IS+I Q N+ HSMFF+E Sbjct: 265 -----QKNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLE 316 Query: 729 ALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMN---NSRVAPRWMELQQ 899 +++VPPIKFRPP+KGG SVMEHPQT LL++VLQ N+SLGN H N +S++ WM+LQQ Sbjct: 317 SVLVPPIKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQ 376 Query: 900 SVNVLFGNKKSTSQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVN 1076 S+N+LF +K + +++A GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPYLAVN Sbjct: 377 SINILFDSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVN 436 Query: 1077 EIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPL--SRKS 1250 EIGIPPYFALRLTYPERVT WNV KLRNAIINGPE HPGAT IDK KL L SRKS Sbjct: 437 EIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKS 496 Query: 1251 RNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 1430 R SISRKLPSSRGVVV G ++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVR Sbjct: 497 RISISRKLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVR 555 Query: 1431 VLKGEKTIRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDT 1607 VLKGEKTIRMHYANCS TYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY+ PTSG+ Sbjct: 556 VLKGEKTIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEP 615 Query: 1608 KRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVSSIN 1775 R LIQDHI+SAVLLTK+DTFL +++++ LLY+SG+S + S K GQ + +++ Sbjct: 616 IRALIQDHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLD 671 >ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum tuberosum] Length = 1675 Score = 634 bits (1634), Expect = e-179 Identities = 338/614 (55%), Positives = 426/614 (69%), Gaps = 17/614 (2%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQ+ CF+C HFR VEKC S+LELI KGDVVGAK +D+ SP + E++ +++ Sbjct: 94 LLQRTCFYCFHFRASRAEVEKCVSELELIAKGDVVGAKMIDALSPDNSTDREESEGSHMS 153 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 A M ++ ++ SW + Q EAM+++D +K K + C C KNP I P+FG Sbjct: 154 CAMDDLNMQDHR-EYNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFG 212 Query: 363 WIYTSMPNKSIRENVILGSK---LKQPYLGENNVDSDDVESSGAVYD-EMSDSATKT--- 521 + + NK IREN I + L E N + V ++ + + E S T T Sbjct: 213 RFHMDISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGV 272 Query: 522 ----YKKSKGSLLTKVSKQTK--FSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDEL 683 +K +G + V +Q K FS L P++ + I+ LW+NE LC+ +IQ Sbjct: 273 ENSKARKRQGGDQSDVVEQQKDSFSVAHL-PSQVRSIIEHLWENEAPLCTFFCDIQSQHH 331 Query: 684 CMPENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNN 863 SMFF+++++VPPIKFRPP+KGG S+MEHP T LL +V+Q N++LGNAH+N Sbjct: 332 NTSGKVAGPSMFFLDSILVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINR 391 Query: 864 ---SRVAPRWMELQQSVNVLFGNKKSTSQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNY 1031 S++ R M+LQQSVNVLF +K ++ + + G+GICQ+LEKKEGIFRQK+MGKRVN+ Sbjct: 392 AGRSKIISRLMDLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNF 451 Query: 1032 ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCID 1211 ACRSVISPDPYL+VNEIGIPPYFALRLTYPER+TPWN K+R+A+INGPE HPGA D Sbjct: 452 ACRSVISPDPYLSVNEIGIPPYFALRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFAD 511 Query: 1212 KSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQP 1391 + KLP ++K R +ISRKLPSSRG V Q G++ E+E EGKVVYRHLQDGDVVLVNRQP Sbjct: 512 RIATVKLPSNKKMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQP 571 Query: 1392 TLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNA 1571 TLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNA Sbjct: 572 TLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNA 631 Query: 1572 NNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKF 1751 N QYI+PT GDT RGLIQDHIV AV+LT ++TFLT ++N LLY SGV AA + G Sbjct: 632 NEQYIVPTKGDTVRGLIQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNH 691 Query: 1752 GQNVSSINTEDGIQ 1793 VS ++ E +Q Sbjct: 692 SNKVSVVDFEGVVQ 705 >gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus] Length = 1719 Score = 631 bits (1627), Expect = e-178 Identities = 343/633 (54%), Positives = 434/633 (68%), Gaps = 36/633 (5%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEA-----LLSREND 167 +L K C +C F E E SQLELI KGD+ GAK + S + +S ++D Sbjct: 98 ILNKTCLYCLQFISSAEETENFVSQLELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDD 157 Query: 168 SVNVNDAT----CHSRMHGFETKHL---EQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCG 326 + D+ HS + H EQ SW+S Q EA+S+++ +++RK K C C Sbjct: 158 TDEREDSQGSHMSHSAVLSDGENHFKDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCE 217 Query: 327 LKNPSITCPTFGWIYT--SMPNKSIRENVILGSKLKQPYL--GENNVDSDDVESSGAVYD 494 ++ P I+ PTFGW + K+IRENVI KL + GE+N S+ V + + Sbjct: 218 MRCPKISKPTFGWFQVGGATSAKAIRENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMN 277 Query: 495 EMSDSATK-----TYKKSKGSLLTKVSKQTKFSPG----------PLWPTETKDRIKLLW 629 + S++ T +K S V++ K +PG PL P++ +D +KLLW Sbjct: 278 DDSETVESNSFIATSNSTKKSKKKGVNRAKKLNPGSGDPNFYLSGPLLPSQVRDILKLLW 337 Query: 630 QNENRLCSLISNIQQDELCMP-ENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTT 806 + E CS IS+IQ+ + C P N+ +SMFF+E ++VPPI+FRPP+KGG SVMEHPQT Sbjct: 338 EKEASFCSYISDIQRQK-CKPFGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTV 396 Query: 807 LLSQVLQCNLSLGNAHMN--NSRVAPRWMELQQSVNVLFGNKKSTS--QRDNAGTGICQL 974 LL +VLQ N++LGNAH+N S++ RWMELQQS+NV F +K +TS Q+D+ GICQ Sbjct: 397 LLGKVLQSNIALGNAHVNAEKSKIISRWMELQQSINVYFDSKTATSLAQKDSIA-GICQF 455 Query: 975 LEKKEGIFRQKLMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKL 1154 LEKKEGIFRQK+MGKRVN+ACRSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWN KL Sbjct: 456 LEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKL 515 Query: 1155 RNAIINGPEVHPGATLCIDKSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEG 1334 R A++NGP++HPGAT +D T KLP S+K R +ISRKLPSSRGVV Q GK + E EG Sbjct: 516 RGAVVNGPDIHPGATTYVDSVTIVKLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEG 575 Query: 1335 KVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMN 1514 K V+RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GE+T+RMHYANCS+YNADFDGDE+N Sbjct: 576 KTVHRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEIN 635 Query: 1515 VHFPQDEISRAEALNIVNANNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNH 1694 VHFPQDEISRAEA NIVNAN QYI+PT GDT RGLIQDHIV AVLLT ++TF+ ++N Sbjct: 636 VHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQ 695 Query: 1695 LLYTSGVSAAARGGSIGKFGQNVSSINTEDGIQ 1793 LLY SGV A+ G + V+ I+TE ++ Sbjct: 696 LLYGSGVFASGPGSLPKNNSRKVTLIDTEGVVE 728 >ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum lycopersicum] Length = 1677 Score = 627 bits (1616), Expect = e-177 Identities = 334/614 (54%), Positives = 424/614 (69%), Gaps = 17/614 (2%) Frame = +3 Query: 3 LLQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVN 182 LLQ+ CF+C HFR VEKC S+LELI KGDVVGAK +D+ SP + E++ +++ Sbjct: 94 LLQRTCFYCFHFRASRAEVEKCVSELELIAKGDVVGAKMIDALSPDNSTDREESEGSHMS 153 Query: 183 DATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFG 362 T ++ ++ SW + Q EAM+++D +K K + C C KNP I P+FG Sbjct: 154 -CTMDDLNVRDHCEYNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFG 212 Query: 363 WIYTSMPNKSIRENVILGSK---LKQPYLGENNVDSDDVESSGAVYD-EMSDSATKTY-- 524 + + NK IREN I + L E N + V ++ + + E S T T Sbjct: 213 RFHMDISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGV 272 Query: 525 -----KKSKGSLLTKVSKQTK--FSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDEL 683 +K +G + V +Q K FS L P++ + I+ LW+NE LC+ +IQ Sbjct: 273 ENSKGRKRQGGDQSDVVEQQKDSFSVAHL-PSQVRSIIEHLWENEAPLCTFFCDIQSQHR 331 Query: 684 CMPENRGNHSMFFIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNN 863 SMFF+++++VPP+KFRPP+KGG S+MEHP T LL +V+Q N++LGNAH+N Sbjct: 332 NTSGKVAGPSMFFLDSILVPPVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINR 391 Query: 864 ---SRVAPRWMELQQSVNVLFGNKKSTSQ-RDNAGTGICQLLEKKEGIFRQKLMGKRVNY 1031 S++ R M+LQQSVNVLF +K ++ + + G+GICQ+LEKKEGIFRQK+MGKRVN+ Sbjct: 392 AGRSKIISRLMDLQQSVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNF 451 Query: 1032 ACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCID 1211 ACRSVISPDPYL+VNEIGIPPYFA RLTYPER+TPWN K+R+A+INGPE HPGA D Sbjct: 452 ACRSVISPDPYLSVNEIGIPPYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFAD 511 Query: 1212 KSTKTKLPLSRKSRNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQP 1391 + KLP ++K R +ISRKLPSSRG V Q G++ E+E EGKVVYRHLQDGDVVLVNRQP Sbjct: 512 RIATVKLPSNKKMRVAISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQP 571 Query: 1392 TLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNA 1571 TLHKPSIMAHVVRVLKGEKT+RMHYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNA Sbjct: 572 TLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNA 631 Query: 1572 NNQYIIPTSGDTKRGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKF 1751 N QYI+PT GDT RGLIQDHIV AV+LT ++TFL+ ++N LLY SGV AA + G Sbjct: 632 NEQYIVPTKGDTVRGLIQDHIVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNH 691 Query: 1752 GQNVSSINTEDGIQ 1793 VS ++ E +Q Sbjct: 692 SNKVSIVDFEGVVQ 705 >ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata] Length = 1678 Score = 619 bits (1595), Expect = e-174 Identities = 320/591 (54%), Positives = 410/591 (69%), Gaps = 5/591 (0%) Frame = +3 Query: 6 LQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVND 185 LQ+ CF CHHF + VE+ SQL+LIIKGD+V AK ++S +P+++ ++ V+ Sbjct: 115 LQRTCFICHHFMAKPYDVERAVSQLKLIIKGDIVSAKQLESNTPTKS----DSSDVSCES 170 Query: 186 ATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFGW 365 G E +E WTS+Q E +++ FM+ KSC RC NP + P FGW Sbjct: 171 GVTTDSSEGCEDSDMEDQRWTSLQFAEVTAVMKNFMRLSSKSCNRCKAVNPQLEKPMFGW 230 Query: 366 I-YTSMPNKSIRENVILGSKLKQPYLGENNVDSDDVESSGA-VYDEMSDSATKTYKKSKG 539 + +M I NVI G KLK+ N DD + SG E+ D +T +KS Sbjct: 231 VRMKAMKGSDIVANVIRGLKLKKSTSSVEN--PDDFDDSGIDALSEVEDGDKETREKST- 287 Query: 540 SLLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSMF 719 ++ + + S L PTE ++ +K LW+NE+ CS I ++ Q + ++SMF Sbjct: 288 EVVKEFEEHNNSSKRDLLPTEVREILKDLWENEHDFCSFIGDLWQSG----SEKIDYSMF 343 Query: 720 FIEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNN---SRVAPRWME 890 F+E+++VPPIKFRP +KGG SVMEHPQT L++VL N+ LGNA N S++ RWM Sbjct: 344 FLESVLVPPIKFRPSTKGGDSVMEHPQTVGLNKVLGSNIQLGNACTNKLDQSKIISRWMN 403 Query: 891 LQQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLA 1070 LQ+SVNVLF +K +T Q G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPY+A Sbjct: 404 LQESVNVLFDSKTATVQSQREGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIA 463 Query: 1071 VNEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPLSRKS 1250 VN+IGIPP FAL+LTYPERVTPWNV KLR AIINGP++HPGAT DK + KLP + K+ Sbjct: 464 VNDIGIPPCFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKA 523 Query: 1251 RNSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVR 1430 R +I+RKL SSRG + GK+ + EGK V+RH++DGDVVLVNRQPTLHKPS+MAH+VR Sbjct: 524 RRAIARKLLSSRGATTELGKTCDINFEGKTVHRHMRDGDVVLVNRQPTLHKPSLMAHIVR 583 Query: 1431 VLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTK 1610 VL+GEKT+R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY P++GD Sbjct: 584 VLRGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPL 643 Query: 1611 RGLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNV 1763 R LIQDHIVS+VLLTKRDTFL + +N LL++SGV+ G+ G+ V Sbjct: 644 RALIQDHIVSSVLLTKRDTFLDKDHFNQLLFSSGVTDMVLSSFSGRSGKKV 694 >ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella] gi|482559195|gb|EOA23386.1| hypothetical protein CARUB_v10016563mg [Capsella rubella] Length = 1651 Score = 615 bits (1586), Expect = e-173 Identities = 320/591 (54%), Positives = 407/591 (68%), Gaps = 4/591 (0%) Frame = +3 Query: 6 LQKYCFFCHHFRDEVELVEKCSSQLELIIKGDVVGAKNVDSPSPSEALLSRENDSVNVND 185 LQ+ CFFCHHF + V+KC SQL+LI+KGD+V AK ++ S S + S E+ V+ Sbjct: 102 LQRTCFFCHHFMAKPNDVKKCVSQLKLIMKGDIVSAKQLEVKSDSTSTNS-EDIEVSCES 160 Query: 186 ATCHSRMHGFETKHLEQHSWTSIQHGEAMSLLDGFMKRKKKSCKRCGLKNPSITCPTFGW 365 + E +E WTS+Q E +++ FMK K C +C KNP + P FGW Sbjct: 161 GVTNDSSQECEDPDMEDQRWTSLQFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGW 220 Query: 366 IYTSMPNKS-IRENVILGSKLKQPYLGENNVDSDDVESSGAVYDEMSDSATKTYKKSKGS 542 + N S + N+I G K+K+ N D +++ D + K+ K + Sbjct: 221 VRMKGMNASAVGANLIRGLKVKKSTSSVENPDDSGIDALSEAEDSDKE------KREKST 274 Query: 543 LLTKVSKQTKFSPGPLWPTETKDRIKLLWQNENRLCSLISNIQQDELCMPENRGNHSMFF 722 + K ++ K + L P+E + +K LW+NE+ CS I ++ Q + ++SMFF Sbjct: 275 EIAKEFEKQKDTKRDLLPSEVRAILKNLWENEHEYCSFIGDLWQSG----SEKIDYSMFF 330 Query: 723 IEALVVPPIKFRPPSKGGTSVMEHPQTTLLSQVLQCNLSLGNAHMNN---SRVAPRWMEL 893 +E+++VPPIKFRPP+KGG SVMEHPQT L++VL N++LGNA N S+V RWM L Sbjct: 331 LESVLVPPIKFRPPTKGGDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNL 390 Query: 894 QQSVNVLFGNKKSTSQRDNAGTGICQLLEKKEGIFRQKLMGKRVNYACRSVISPDPYLAV 1073 Q+SVNVLF +K ++ Q G+GICQLLEKKEG+FRQK+MGKRVN+ACRSVISPDPY+AV Sbjct: 391 QESVNVLFDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAV 450 Query: 1074 NEIGIPPYFALRLTYPERVTPWNVTKLRNAIINGPEVHPGATLCIDKSTKTKLPLSRKSR 1253 NEIGIPP FAL+L YPERVTPWNV KLR AIINGP+VHPGAT DK + KLP S K R Sbjct: 451 NEIGIPPCFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKER 510 Query: 1254 NSISRKLPSSRGVVVQPGKSLEHELEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRV 1433 +I+ KL SSRG + GK+ + EGKVVYR ++DGDVVLVNRQPTLHKPS+MAH+VRV Sbjct: 511 TAIANKLLSSRGATTELGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRV 570 Query: 1434 LKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEALNIVNANNQYIIPTSGDTKR 1613 LKGEKT+R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA NIVNANNQY P++GD R Sbjct: 571 LKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLR 630 Query: 1614 GLIQDHIVSAVLLTKRDTFLTWEDYNHLLYTSGVSAAARGGSIGKFGQNVS 1766 LIQDHIVS+VLLTKRDTFL + +N LL++SGV+ GK G+ V+ Sbjct: 631 ALIQDHIVSSVLLTKRDTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVT 681